mRNA_F-serratus_M_contig110.953.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: D8LLA7_ECTSI (RNA polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA7_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 7.670e-146 Identity = 300/514 (58.37%), Postives = 345/514 (67.12%), Query Frame = 2
Query: 41 MNFTSRIRPRPRSWQLGSTRFILSVAAIVRSGLHIETDAFSV---AFVPSPGEAYAIDALSPSCSFWSATPWSTTTGRSGEPQRWS--SVPRGSLAGSGSAWDGRGRPGNSAGRRTALAALGTAFAPTNAV--------------SPRDEKDSYQERRATGESVNRITNFA-FG-RPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELG-REPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASST------NGSGSXXXXXXXXXXXXXXLGR---------ASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLRRRPER 1471
M+ SR+RPRPRSW GS RF+LSVAAIVRSGLHI TDAF++ A P + + L +ATP R W SV +L G+ D R G + L A+GTA AP+ V S R K S QE RA +N IT+FA +G R T MT++EE LV EVK LA +LKTR+ L ELG REP+ EEWA S+ ++ ELA QM AS RAQERIV AN GLIV+MARRHHP +GTI +D+IQEGSLA+LRAAETF+PRLGYRFSTYAGWWVRDRV RCV +QAR+IRLPQ+VHNFRRT + TEA L+KELGR P Y+E AERMRVDV RV R NCP+ FSLD AP S+ SG XXXXXXXXXXXXXX A GAGYRHE+VACSM++PEQ AE LF++KLD L+SVLS DERLVV LRYGLGGASP T EVA +AGSTKHRVRMVETRALNKLRRRP R
Sbjct: 1 MSSRSRLRPRPRSWCSGSARFLLSVAAIVRSGLHIATDAFTLPSGAGHPPRSRSASERLLLLEVEAETATPARNPQSRP-TSDAWCARSVAGNALRGACPGHDRLPRGRRHRGCSSRLGAVGTA-APSEVVVGVGGAAGPAVLGASARVRKASNQEVRAVTRGLNSITSFAAYGSRDTAGRMTIAEEILLVEEVKILARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMVASARAQERIVGANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAERMRVDVERVTRLMNCPDAFSLDDAPPPSARIVRDRIGLSGGXXXXXXXXXXXXXXXXXXXXXXXXKAAPGAGYRHERVACSMVNPEQRAEVGLFESKLDKLLSVLSEDERLVVKLRYGLGGASPTTWGEVAARAGSTKHRVRMVETRALNKLRRRPGR 512
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A6H5KNQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ9_9PHAE) HSP 1 Score: 332 bits (851), Expect = 3.130e-101 Identity = 212/390 (54.36%), Postives = 251/390 (64.36%), Query Frame = 2
Query: 41 MNFTSRIRPRPRSWQLGSTRFILSVAAIVRSGLHIETDAFSVAFVPS-----PGEAYAIDALSPSCSFWSATPWSTTTGRSGEPQRWSSVPRGSLAGSGSAWDGRGRPGNSAGRR-----TALAALGTAFAPTNAV--------------SPRDEKDSYQERRATGESVNRITNFA-FG-RPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELG-REPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASS 1129
M+ SR+RPRPRSW +GS RF+LSVAAIVRSGLHI TDAF++ PS P A + L +A P R W + S+AG+ G GRR + L A+GTA P+ V S R K S QE RA +N IT+FA +G R T MT++EE LV EVK LA +LKTR+ L ELG REP+ EEWA S+ ++ ELA QM AS RAQERIVEAN GLIV+MARRHHP +GTI +D+IQEGSLA+LRAAETF+PRLGYRFSTYAGWWVRDRV RCV +QAR+IRLPQ+VHNFRRT + TEA L+KELGR P Y+E AERM VDV RV R NCP+ FSLD AP S+
Sbjct: 1 MSSRSRLRPRPRSWFVGSARFLLSVAAIVRSGLHIATDAFTL---PSGAGRPPRNGSASERLLLEVEAETAPPARNPQSRP-TSDAWCAR---SVAGNALRCACPGHDRQPGGRRHRGFSSRLGAVGTA--PSEVVVGLGGAARPALLGASARARKASKQEVRAMTRGLNSITSFAAYGSRETPGRMTMAEEILLVEEVKLLARYLKTREQLEAELGGREPTREEWAASLNISTEELAHQMMASARAQERIVEANVGLIVVMARRHHPATMARGTITSDVIQEGSLAVLRAAETFDPRLGYRFSTYAGWWVRDRVTRCVTQQARIIRLPQYVHNFRRTASMTEAALLKELGRRPTYDEIAERMEVDVERVTRLMNCPDAFSLDDAPPPSA 381
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA) HSP 1 Score: 182 bits (463), Expect = 5.150e-46 Identity = 114/335 (34.03%), Postives = 174/335 (51.94%), Query Frame = 2
Query: 458 ATGESVNRITNF--AFGRPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
A G S N + F + G+ ++ + EE L +V+A+ G R GL +LGR P+LEEWA+SVGM EL ++ Q A++ ++ +N L++ +A+R+ ++G DLIQEGSL L+RA E F+P G++FSTY+ WW++ + R + +Q+R IRLP H+H+ T+ K L LGR P EE AERM + + ++ C A + T S S G + + P Q EA + + ++ L+ LSP E+ V+ +R+GL P TL E+ T+ RVR +E RAL+KLR
Sbjct: 152 AAGSSSNELGWFFKSIGQHSL--LRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQ----KRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRPAVSMDAQRRAMTKKSSSAGK---------------GGEVQLGDSIKDDGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLR 465
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A6U5F3I3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F3I3_9STRA) HSP 1 Score: 179 bits (454), Expect = 3.910e-45 Identity = 111/331 (33.53%), Postives = 171/331 (51.66%), Query Frame = 2
Query: 464 GESVNRITNFAFGRPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
GES T F + +T +EE L E+ ++ R+ +GR PS EEWA S + + +L Q++ S+ A+ R+V N GL+V +A+++ +G DL+QEG+L L+ AAE F P+ G++F TYA WW+R R+ R + E +R+IRLP+HVH + KT L ELGR P E A RM + + +V + + + + P++ G+ + +A +PE EA L +A+L +M L+P ER V+ +R+GL + T+ EVA + T+ +VR VE RALNKLR
Sbjct: 135 GESRISSTKFNSFQGRTALLTRAEEATLSNEISKFVSLIRIREDFERAVGRVPSDEEWAESTNLNIFDLLQQIKRSRDARARLVNGNVGLVVSIAKKYK----NRGLAFADLVQEGNLGLMEAAERFEPKKGFKFCTYASWWIRQRMTRSIAEYSRVIRLPEHVHMSLGIMQKTTKELTVELGRQPTKLEIASRMNIPLKKVEKLSVSSKIVLSLEIPVS-----------------------GKVDDRRTLKDGIASDSPTPEDHTEASLLRAELIAVMEELAPTERDVLMMRFGLDDGTSKTIDEVASRMKVTREKVRSVEARALNKLR 438
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.640e-43 Identity = 112/313 (35.78%), Postives = 164/313 (52.40%), Query Frame = 2
Query: 533 EETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPET-FSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPE----QGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
EE AL ++K R+ L + L R PSL EWA +G+ L M S RA+ ++ AN L V +A+R+ R+G DLIQEGS L++AAE F+P G++FSTYA WW++ + R + +Q+R IRLP HVH+F ++ + L ELGR P EE A R++V ++V Y + ++ S++Q+ +S GSG AS G + S+ PE + + + L L+ LSP E+ VV LR+GL TL E+ + T+ RVR +E+RAL KLR
Sbjct: 34 EEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYR----RRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELGRHPTDEELAMRLQVTAQKIVFYRDAAQSVLSMEQSRNFASRKGSG------------------ASQGGKSDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLR 324
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A5B8NHW9_9CHRO (RNA polymerase sigma factor SigA n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A5B8NHW9_9CHRO) HSP 1 Score: 172 bits (435), Expect = 3.920e-43 Identity = 113/349 (32.38%), Postives = 178/349 (51.00%), Query Frame = 2
Query: 410 NAVSPRDEKDSYQERRATGESVNRITNFAFGRPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
N S D+ D +++ T +S+ R+ GR +R + EE L ++ L + R L +G EP+LEEWA V M + + ++ +RA+E++V++N L+V +A+++ +G DLIQEGSL L+RAAE F+ GY+FSTYA WW+R + R + +Q+R IRLP H++ I KT +L +ELGR P EE AERM + + ++ A + + P+ + LG + + +PE L + L++++ LSP ER V+ LRYGL TL E+ + T+ R+R +E +AL KLR
Sbjct: 69 NTSSKPDKSDETEKKSYTEDSI-RLYLQEIGR--IRLLRADEEIELARKIADLLELERKRTELEATIGSEPTLEEWAQEVDMPLPKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKY----MNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQELGRKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSR----------------LG---------DFIEADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 385
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: K9RTH4_SYNP3 (RNA polymerase sigma factor, cyanobacterial RpoD-like family n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RTH4_SYNP3) HSP 1 Score: 168 bits (426), Expect = 8.870e-43 Identity = 109/317 (34.38%), Postives = 162/317 (51.10%), Query Frame = 2
Query: 518 PMTVSEETALVG-EVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYAN-CPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLRRR 1462
P+ E+ L G +V+ LA +TR GL LGREPSLEEWA+ ++ EL ++ +RA+ ++VEAN L+V +A+++ ++ DLIQEG++ + R E F+P GYRFSTYA WW+R + R + E+ R IRLP H+ I K + L + LGR E A + + A+V Y + SLD LG E + +SPE+ +A LD LM+ L+P +R V++LR+GL P+TL +V + ++ RVR +E AL KLR+R
Sbjct: 22 PLLTHEQEILYGKQVQMLASLNETRTGLETALGREPSLEEWASQANLSPGELNEIIQGGERAKRKMVEANLRLVVSVAKKY----IKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLSQSLGRAATINELAVELELTPAQVREYLERARQPLSLD-----------------VRVGDNQDTELG---------ELLEDPSLSPEEFTSQSALRADLDRLMADLTPQQRQVIALRFGLEDGQPLTLAKVGDLLNISRERVRQIEREALGKLRKR 308
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A0M1JMH0_9CYAN (RNA polymerase sigma factor SigA n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JMH0_9CYAN) HSP 1 Score: 169 bits (427), Expect = 3.870e-42 Identity = 110/341 (32.26%), Postives = 178/341 (52.20%), Query Frame = 2
Query: 434 KDSYQERRATGESVNRITNFAFGRPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
K ++++ T +S+ R+ GR +R + EE L ++ L + R+ L+ +L REP+L EW+++V M V E ++ +RA+E++V++N L+V +A+++ +G DLIQEGSL L+RAAE F+ GY+FSTYA WW+R + R + +Q+R IRLP H++ I KT LL +E+GR P EE A RM + + ++ A + + P+ + LG + + +PE L + L++++ LSP ER V+ LRYGL TL E+ + T+ R+R +E +AL KLR
Sbjct: 70 KTQAKKKQYTEDSI-RLYLQEIGR--IRLLRADEEIELARKIADLLELERVREELMDQLDREPNLLEWSSAVRMGVPEFRKRLHMGRRAKEKMVQSNLRLVVSIAKKY----MNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSR----------------LG---------DFIESDGETPEDQVSKSLLREDLESVLDTLSPRERDVLRLRYGLDDGKMKTLEEIGQLFNVTRERIRQIEAKALRKLR 378
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: K9YFR5_HALP7 (RNA polymerase sigma factor SigA n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9YFR5_HALP7) HSP 1 Score: 169 bits (427), Expect = 4.150e-42 Identity = 110/350 (31.43%), Postives = 176/350 (50.29%), Query Frame = 2
Query: 407 TNAVSPRDEKDSYQERRATGESVNRITNFAFGRPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
T AV+ E++S ++ + + + I + +R + EE L ++ L + R L +G EP+ EEWA V M + + ++ +RA+E++V++N L+V +A+++ +G DLIQEGSL L+RAAE F+ GY+FSTYA WW+R + R + +Q+R IRLP H++ I KT LL +ELGR P EE AERM + + ++ A + + P+ + LG + + +PE L + L++++ LSP ER V+ LRYGL TL E+ + T+ R+R +E +AL KLR
Sbjct: 60 TKAVTATKEENSKEDSKKKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERKRTELEATIGCEPTDEEWAEEVDMPLQKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKY----MNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSR----------------LG---------DFIEADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 380
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Match: A0A6M8B3D8_9CYAN (RNA polymerase sigma factor SigA n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B3D8_9CYAN) HSP 1 Score: 168 bits (425), Expect = 5.080e-42 Identity = 112/359 (31.20%), Postives = 175/359 (48.75%), Query Frame = 2
Query: 416 VSPRDEKDSYQERRATGESVNR------------ITNFAFGRPTVRPMTVSEETALVGEVKALAGHLKTRQGLVVELGREPSLEEWATSVGMTVHELAAQMEASQRAQERIVEANTGLIVLMARRHHPFAFRQGTIANDLIQEGSLALLRAAETFNPRLGYRFSTYAGWWVRDRVQRCVVEQARLIRLPQHVHNFRRTIAKTEALLMKELGRPPKYEETAERMRVDVARVVRYANCPETFSLDQAPLASSTNGSGSXXXXXXXXXXXXXXLGRASGAGYRHEKVACSMISPEQGAEAFLFQAKLDNLMSVLSPDERLVVSLRYGLGGASPVTLTEVAEKAGSTKHRVRMVETRALNKLR 1456
+ P DE + E+ A G S R I + +R + EE L ++ L + R+ LV +L REP EWA++V M + ++ +RA++++V++N L+V +A+++ +G DLIQEGSL L+RAAE F+ GY+FSTYA WW+R + R + +Q+R IRLP H++ I KT LL +E+GR P EE A RM + + ++ A + + P+ + LG + + +PE L + L+ ++S LSP ER V+ LRYGL TL E+ + T+ R+R +E +AL KLR
Sbjct: 34 IQPEDEAEEDDEKPAKGRSRRRTQVKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLVQDLAREPKHAEWASAVEMELPAFRHRLHVGRRAKDKMVQSNLRLVVSIAKKY----MNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSR----------------LG---------DFIESDGETPEDQVSKSLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 363 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig110.953.1 >prot_F-serratus_M_contig110.953.1 ID=prot_F-serratus_M_contig110.953.1|Name=mRNA_F-serratus_M_contig110.953.1|organism=Fucus serratus male|type=polypeptide|length=482bp MNFTSRIRPRPRSWQLGSTRFILSVAAIVRSGLHIETDAFSVAFVPSPGEback to top mRNA from alignment at F-serratus_M_contig110:526788..542328- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig110.953.1 ID=mRNA_F-serratus_M_contig110.953.1|Name=mRNA_F-serratus_M_contig110.953.1|organism=Fucus serratus male|type=mRNA|length=15541bp|location=Sequence derived from alignment at F-serratus_M_contig110:526788..542328- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig110:526788..542328- >mRNA_F-serratus_M_contig110.953.1 ID=mRNA_F-serratus_M_contig110.953.1|Name=mRNA_F-serratus_M_contig110.953.1|organism=Fucus serratus male|type=CDS|length=2892bp|location=Sequence derived from alignment at F-serratus_M_contig110:526788..542328- (Fucus serratus male)back to top |