mRNA_F-serratus_M_contig110.952.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig110.952.1
Unique NamemRNA_F-serratus_M_contig110.952.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: D8LL98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL98_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 2.980e-126
Identity = 187/247 (75.71%), Postives = 216/247 (87.45%), Query Frame = 3 
Query: 1191 RNRSGQAKKLGKGETRGSHDAAAIAGGDREVTLGHVVDRKMREMGYIRKPALDKLKNRRSWRDRVAAEGVPEVHFIGELSGAEGFGPGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVDSL 1931
            R+  GQ +K     ++    A A   GD+EVTLGHVVDRKMREMGYIRKPA+++LKNRRS RDRVAAEG PEVHFIGE+SGAEGFG G+SCRFRVEGGRHWTCLAGLE GQTHV H D  D+F PWNHP+DLHYTTKSIQGWPR+M+QVWQLDT+GRNVLRGYGFRHLPS PG + VS+PCWRP+G+MQEETAAFFLGVTPRLT+ED VFNRAWDQRCRL+TLPAGTVW++++ LFRN++DQ VD++
Sbjct:  541 RDEGGQERKNKWTRSKDKSLADAPLTGDKEVTLGHVVDRKMREMGYIRKPAVNELKNRRSLRDRVAAEGAPEVHFIGEISGAEGFGSGISCRFRVEGGRHWTCLAGLEEGQTHVMHMDYGDTFAPWNHPVDLHYTTKSIQGWPRMMLQVWQLDTHGRNVLRGYGFRHLPSTPGFSEVSVPCWRPSGSMQEETAAFFLGVTPRLTAEDAVFNRAWDQRCRLITLPAGTVWLQMHGLFRNLEDQGVDNI 787
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A6H5KSL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL2_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 4.040e-96
Identity = 141/175 (80.57%), Postives = 162/175 (92.57%), Query Frame = 3 
Query: 1407 VHFIGELSGAEGFGPGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVDSL 1931
            VHFIGE+SGAEGFG G+SCRFRVEGGRHWTCLAGLE GQTHV H D  D+F PWNHP+DLHYTTKSIQGWPR+M+QVWQLDT+GRNVLRGYGFRHLPS PG + VS+PCWRP+G+MQEETAAFFLGVTPRLT+ED VFNRAWDQRCRL+TLPAGTVW++++ LFRN++DQ VD++
Sbjct:  584 VHFIGEISGAEGFGSGISCRFRVEGGRHWTCLAGLEEGQTHVIHMDYGDTFAPWNHPVDLHYTTKSIQGWPRVMLQVWQLDTHGRNVLRGYGFRHLPSTPGFSEVSIPCWRPSGSMQEETAAFFLGVTPRLTAEDAVFNRAWDQRCRLITLPAGTVWLQMHGLFRNLEDQGVDNI 758
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A836CKT8_9STRA (B9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKT8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 5.790e-73
Identity = 105/182 (57.69%), Postives = 144/182 (79.12%), Query Frame = 3 
Query: 1383 VAAEGVPEVHFIGELSGAEGFGPGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVDS 1928
            + A  VPE+H IGE+ G  GFG GVSC +RVE G++WT L G +AG T VA+AD  +   PWNHP+D+HYTTKS+QGWPRL++QVW+LD +GR  ++GYGF HLP   G+A V++PCWRP G++QEE A+FFLG  P+L S++V+FN AWDQRC+L T P+GT+ +++N+L R+M+DQ+VD+
Sbjct:    1 MVAAHVPEMHVIGEILGGVGFGTGVSCMYRVEAGKNWTLLCGHDAGHTQVAYAD-PEELAPWNHPLDVHYTTKSMQGWPRLVMQVWRLDEFGRMAVQGYGFAHLPCAAGAAEVAVPCWRPVGSVQEEIASFFLGTAPQLRSDEVLFNMAWDQRCQLTTAPSGTIILQLNILLRDMRDQNVDT 181
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A7S1XQQ9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQQ9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.630e-63
Identity = 111/213 (52.11%), Postives = 144/213 (67.61%), Query Frame = 3 
Query: 1317 EMGYIRKPALDKLKNRRSWRDRVAAEGVPEVHFIGELSGAEGFG---------PGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVDS 1928
            E+G IR+   ++LK RR  RDRV A   PEVHF+GE+ GA G            G+ C+F VE G++W+ LAG + GQT VA+++      P NHPIDLH+TTKS+QGWPR + QVW LD +GR  + GYGF HLP  PG   V +PCWRPTGT++EET AFFLG T +LT++DVVF  AWD R RLVT  AG++ ++V VL R+  +  VD+
Sbjct:  206 ELGPIRRVLPERLKARRRLRDRVEATSAPEVHFMGEIRGAVGESFSTMIGFDAEGIFCKFMVEAGKYWSHLAGDQIGQTQVAYSEDETGLRPMNHPIDLHFTTKSLQGWPRFIAQVWALDVFGRANVVGYGFAHLPVMPGMHTVEVPCWRPTGTLKEETEAFFLGTTTQLTTDDVVFGTAWDNRWRLVTASAGSLVLDVAVLTRHFNEHSVDA 418
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A2R5G8Y1_9STRA (B9 domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8Y1_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.560e-52
Identity = 92/185 (49.73%), Postives = 122/185 (65.95%), Query Frame = 3 
Query: 1374 RDRVAAEGVPEVHFIGELSGAEGFGPGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVDS 1928
            ++R  A   PEVH IGE+ G   FG GV CR++++ G  W  L+G   GQTHV +    DS   W+HP+D+H+  K IQGWPRL+VQVWQ+D +GR  LRGYGF HLP   GS  + +  WRP GT++EE AA FLGVTP+L   D++F +AW  RCRL T  AG V + V++L RN    +V++
Sbjct:   88 KERQVALHEPEVHVIGEIDGGINFGSGVCCRWQLDFGSAWEPLSGNVEGQTHVDYPSDGDS-AVWSHPLDVHFLAKGIQGWPRLLVQVWQMDEFGRVHLRGYGFTHLPCASGSYELDVATWRPMGTLKEEIAANFLGVTPQLRDMDLLFKKAWSDRCRLSTTSAGIVRVNVDILLRNFHLYNVNA 271
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A7S2P2G6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2G6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.700e-50
Identity = 90/205 (43.90%), Postives = 130/205 (63.41%), Query Frame = 3 
Query: 1326 YIRKPALDKLKNRRSWRDRVAAEGVPEVHFIGELSGAEGFGPG----VSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAA-VSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVD 1925
            + R+   +++  R   R R+A E +PEVHF+GE+S  E         +SCR+R++ G+ W+ +AG  +GQ+  +     D    WNHPIDLH  + S+QGWPR++VQ+W+LD YGR  L GYGF HLP N G    V +PCWRP GT +EE  A FLG  P LT++D++F  +W  RCR+VT+ AG V + ++V+ R+  +  VD
Sbjct:  166 FFRREPRERMDERMQERMRIAFERIPEVHFLGEISFGESCSTSSDVCISCRWRIDWGKSWSSVAGECSGQSQYS-LRRDDGHAIWNHPIDLHLISASVQGWPRMIVQLWELDEYGRAGLAGYGFCHLPVNVGQTINVDIPCWRPCGTSREELEALFLGTKPILTNDDIIFGSSWKNRCRIVTVSAGKVHLSLSVILRHFSEHRVD 369
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A6U0YPS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0YPS4_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.710e-49
Identity = 101/237 (42.62%), Postives = 140/237 (59.07%), Query Frame = 3 
Query: 1224 KGETRGSHDAAAIAGGD--REVTLGHVVDRKMREMGYIRKPALDKLKNRRSWRDRVAAEGVPEVHFIGELSGAEGFGPGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDVDS 1928
            +G  +   D   ++G +  ++ TL H  D  +R     R P +  L+  R+   RVA    PEVH IGEL G E FG GV+CR+R+E G+ W  L G   G T  A+     +   WNHPID+HY   S+QGWP+++V V +LD YGR    GYGF  LP+ PG   V++ CWRPTGT  +E  AFFLG  P L  +DV++++A   R RLVT+PAG V +E+N++ R+     VD+
Sbjct:  196 RGXXQEEEDRDGVSGSNPVKQGTLPHPSDAALR-----RPPGVHNLQQARAVDHRVAPSKAPEVHVIGELLGGEAFGTGVACRWRLEHGKFWGVLEGSTQGHTQTAYCP-DGALAVWNHPIDVHYHATSVQGWPKIIVHVTKLDEYGRLGTVGYGFASLPTVPGCHDVTVNCWRPTGTKGDELRAFFLGDYPHLLDDDVIYHKATAFRNRLVTIPAGRVHLEINLMTRHFAAYGVDA 426
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: B5YLQ9_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLQ9_THAPS)

HSP 1 Score: 175 bits (443), Expect = 3.380e-47
Identity = 81/174 (46.55%), Postives = 120/174 (68.97%), Query Frame = 3 
Query: 1404 EVHFIGELSGAEGFGPG-VSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQDV 1922
            EVHFIGE+    GF    VSC++ +E G+ W+ LAG ++ QT  A +D  D    W+HPID+H+ + S+QGWPR++VQVW+LD +GR+ L GYGF HLP+N G  ++ + CWRP+G+++EE  +FFLG +  L  ED +F +AW+ R +LVT+ +G V + + VL R   +Q+V
Sbjct:    1 EVHFIGEICEGIGFNDSFVSCKWYLEWGKSWSFLAGDDSSQTQYACSD--DGVQVWSHPIDVHFASASMQGWPRIIVQVWELDEFGRSSLSGYGFVHLPTNAGYHSLEIRCWRPSGSVREELQSFFLGTSSCLLDEDTIFGKAWENRSQLVTVSSGIVKLNLTVLLRFFNEQNV 172
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: A0A7S3YY39_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YY39_9EUKA)

HSP 1 Score: 169 bits (428), Expect = 5.190e-45
Identity = 81/168 (48.21%), Postives = 107/168 (63.69%), Query Frame = 3 
Query: 1401 PEVHFIGELSGAEGFG-PGVSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFR 1901
            PEVH IGE+ G EGFG     C FRVE G +W C  G E GQ+ V +A    +   WNHP+DLH+ TKS +GWP L  +V  LD+ G   L GYG  ++PS+PGS  +  P WRPTGT +EE   FFLG  P+L  +D +F++A +QR RL T  AG V ++++V+ R
Sbjct:    6 PEVHVIGEICGGEGFGHSNAFCSFRVEKGEYWECCEGKETGQSQVDYAQPGSAGFTWNHPLDLHFFTKSAKGWPALSFEVGALDSTGARTLCGYGSCYIPSSPGSHDIKCPIWRPTGTPKEEITGFFLGARPQLVDKDAIFSKASEQRYRLFTETAGYVKLKLDVIVR 173
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BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Match: K3X035_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X035_GLOUD)

HSP 1 Score: 174 bits (442), Expect = 5.470e-45
Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = 3 
Query: 1401 PEVHFIGELSGAEGFGPG-VSCRFRVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWPRLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETAAFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQ 1910
            PEVH +GE++  EGFG G  +C++ +E G  W  +AG + GQT + +   S     W+HPIDLH+   S QGWP+L+ QVWQ+DT+ ++ + GYGF HLP +PG   +S+  WRP G+ +EE  A FLG TP L +++V+F+ AW +RCRL T+  G V ++V +L RN +
Sbjct:  162 PEVHIVGEITSGEGFGHGGFACKWGIEYGSMWHHIAGDQLGQTQIDYPSSSTHPIIWSHPIDLHFAAASFQGWPKLLFQVWQIDTHMKSSVAGYGFIHLPFSPGEYHLSVALWRPIGSAKEEMEARFLGHTPELVTDEVIFSSAWAERCRLQTIATGKVHLQVGILLRNFE 332
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL98_ECTSI2.980e-12675.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSL2_9PHAE4.040e-9680.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKT8_9STRA5.790e-7357.69B9 domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S1XQQ9_9STRA2.630e-6352.11Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A2R5G8Y1_9STRA4.560e-5249.73B9 domain-containing protein 2 n=1 Tax=Hondaea fer... [more]
A0A7S2P2G6_9STRA2.700e-5043.90Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U0YPS4_9STRA3.710e-4942.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B5YLQ9_THAPS3.380e-4746.55Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S3YY39_9EUKA5.190e-4548.21Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
K3X035_GLOUD5.470e-4545.61Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig110contigF-serratus_M_contig110:522232..526868 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.8
Seed ortholog evalue1.3e-110
Seed eggNOG ortholog2880.D8LL98
Preferred nameB9D2
KEGG koko:K16745,ko:K19382
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001578,GO:0001736,GO:0001738,GO:0002009,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007163,GO:0007164,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007568,GO:0007610,GO:0008092,GO:0008104,GO:0008150,GO:0008340,GO:0008589,GO:0009653,GO:0009888,GO:0009966,GO:0009987,GO:0010259,GO:0010646,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0030425,GO:0030537,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035082,GO:0035177,GO:0035869,GO:0036038,GO:0036064,GO:0036372,GO:0036477,GO:0040011,GO:0042886,GO:0042995,GO:0043005,GO:0043015,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044292,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0048232,GO:0048468,GO:0048515,GO:0048583,GO:0048609,GO:0048729,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051674,GO:0051704,GO:0060271,GO:0060429,GO:0060756,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0097447,GO:0097458,GO:0097711,GO:0097722,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1904491,GO:1905349,GO:1905515
EggNOG free text desc.cilium assembly
EggNOG OGsKOG4028@1,KOG4028@2759
Ec32 ortholog descriptionB9 domain
Ec32 orthologEc-27_001830.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons7
Model size2318
Cds size1248
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.0053153-UTR-F-serratus_M_contig110:522231..5226231622928970.0053153-UTR-F-serratus_M_contig110:522231..522623Fucus serratus maleUTRF-serratus_M_contig110 522232..522623 +
1690962651.5360553-UTR-F-serratus_M_contig110:522231..5226231690962651.5360553-UTR-F-serratus_M_contig110:522231..522623Fucus serratus maleUTRF-serratus_M_contig110 522232..522623 +
1622928970.0186071-UTR-F-serratus_M_contig110:522883..5232101622928970.0186071-UTR-F-serratus_M_contig110:522883..523210Fucus serratus maleUTRF-serratus_M_contig110 522884..523210 +
1690962651.5570717-UTR-F-serratus_M_contig110:522883..5232101690962651.5570717-UTR-F-serratus_M_contig110:522883..523210Fucus serratus maleUTRF-serratus_M_contig110 522884..523210 +
1622928970.1824663-UTR-F-serratus_M_contig110:526517..5268681622928970.1824663-UTR-F-serratus_M_contig110:526517..526868Fucus serratus maleUTRF-serratus_M_contig110 526518..526868 +
1690962651.6172867-UTR-F-serratus_M_contig110:526517..5268681690962651.6172867-UTR-F-serratus_M_contig110:526517..526868Fucus serratus maleUTRF-serratus_M_contig110 526518..526868 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.0313983-CDS-F-serratus_M_contig110:523210..5235991622928970.0313983-CDS-F-serratus_M_contig110:523210..523599Fucus serratus maleCDSF-serratus_M_contig110 523211..523599 +
1690962651.566731-CDS-F-serratus_M_contig110:523210..5235991690962651.566731-CDS-F-serratus_M_contig110:523210..523599Fucus serratus maleCDSF-serratus_M_contig110 523211..523599 +
1622928970.045055-CDS-F-serratus_M_contig110:523817..5239891622928970.045055-CDS-F-serratus_M_contig110:523817..523989Fucus serratus maleCDSF-serratus_M_contig110 523818..523989 +
1690962651.5755384-CDS-F-serratus_M_contig110:523817..5239891690962651.5755384-CDS-F-serratus_M_contig110:523817..523989Fucus serratus maleCDSF-serratus_M_contig110 523818..523989 +
1622928970.0577445-CDS-F-serratus_M_contig110:524185..5243111622928970.0577445-CDS-F-serratus_M_contig110:524185..524311Fucus serratus maleCDSF-serratus_M_contig110 524186..524311 +
1690962651.5843527-CDS-F-serratus_M_contig110:524185..5243111690962651.5843527-CDS-F-serratus_M_contig110:524185..524311Fucus serratus maleCDSF-serratus_M_contig110 524186..524311 +
1622928970.0702558-CDS-F-serratus_M_contig110:524815..5250191622928970.0702558-CDS-F-serratus_M_contig110:524815..525019Fucus serratus maleCDSF-serratus_M_contig110 524816..525019 +
1690962651.5925393-CDS-F-serratus_M_contig110:524815..5250191690962651.5925393-CDS-F-serratus_M_contig110:524815..525019Fucus serratus maleCDSF-serratus_M_contig110 524816..525019 +
1622928970.0868988-CDS-F-serratus_M_contig110:525584..5257311622928970.0868988-CDS-F-serratus_M_contig110:525584..525731Fucus serratus maleCDSF-serratus_M_contig110 525585..525731 +
1690962651.6028023-CDS-F-serratus_M_contig110:525584..5257311690962651.6028023-CDS-F-serratus_M_contig110:525584..525731Fucus serratus maleCDSF-serratus_M_contig110 525585..525731 +
1622928970.1622968-CDS-F-serratus_M_contig110:526307..5265171622928970.1622968-CDS-F-serratus_M_contig110:526307..526517Fucus serratus maleCDSF-serratus_M_contig110 526308..526517 +
1690962651.6099641-CDS-F-serratus_M_contig110:526307..5265171690962651.6099641-CDS-F-serratus_M_contig110:526307..526517Fucus serratus maleCDSF-serratus_M_contig110 526308..526517 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig110.952.1prot_F-serratus_M_contig110.952.1Fucus serratus malepolypeptideF-serratus_M_contig110 523211..526517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig110.952.1

>prot_F-serratus_M_contig110.952.1 ID=prot_F-serratus_M_contig110.952.1|Name=mRNA_F-serratus_M_contig110.952.1|organism=Fucus serratus male|type=polypeptide|length=416bp
MRGVKGRHSGDDADSVADGLSRKDEIAQADERDDTAEERFKTMRRRTRNA
SEGKTRKRSSIDVRSERPGESPRSARGPSSDKAAVGGMRASAEADSGEGD
GGQYIANQNADAKQAGRVLRGHQDNSDSTSGDGSSALSPRSGDAEGGHID
DDGGANIRNRSGQAKKLGKGETRGSHDAAAIAGGDREVTLGHVVDRKMRE
MGYIRKPALDKLKNRRSWRDRVAAEGVPEVHFIGELSGAEGFGPGVSCRF
RVEGGRHWTCLAGLEAGQTHVAHADLSDSFCPWNHPIDLHYTTKSIQGWP
RLMVQVWQLDTYGRNVLRGYGFRHLPSNPGSAAVSLPCWRPTGTMQEETA
AFFLGVTPRLTSEDVVFNRAWDQRCRLVTLPAGTVWIEVNVLFRNMQDQD
VDSLLYGHQSVPRGV*
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mRNA from alignment at F-serratus_M_contig110:522232..526868+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig110.952.1 ID=mRNA_F-serratus_M_contig110.952.1|Name=mRNA_F-serratus_M_contig110.952.1|organism=Fucus serratus male|type=mRNA|length=4637bp|location=Sequence derived from alignment at F-serratus_M_contig110:522232..526868+ (Fucus serratus male)
CTACAGCGGGTGCGCCTAGAGTTGGGAGGACGCTTTCACCTTTGGCGTCA
ACAAGTCGTCAACAGCCAGTTTCCGCGGGTGGAGATTTTCGGAGAGCGGA
TGATACAGAGGTAGCGGGGAGGTTGGACGAGGAAAATCTGGAGTCCCGCA
GAATACGGCGGAGACGTCGACGGGAGAGAGAGCGGGGCGAGGACAACGGT
GGGGATGATGACGGAGCACGGGTTTCAGTTGAGGCGACAACTGTAGCGAG
AACTCCGTCGGCCAAAGATGTTGCTGAGGAAATCAGCGCACGCGGGGTGC
CTCCTCAAGAGAAGCCTAGAGGACCACCCCCACAAGAAAAACCCAAGCCC
ACTACGAGGCGAGCTCGAATCGAGCAGCAGAAGCGAGATGAGGTGCTCCT
GTAGTTTCAGCCCTCTAACTAGCGATGCCAACGCTCTGAATCTTTGGTCT
TGAGAGCTCATGTATAGAATGGCCACAGCAGGACCAGGCTTTTGATGGAG
TAATCTTGGTCTTGCGAGAGAACACGATATTGGCAGACTTTTAAGTTTCA
TTTCAAATCATCGACGTAGCCACCCCCAGCGTTCTCGTTGTGGTATCATA
GCCTACTTCTGGTTCGCTCGTGTTCATGCCGTACACTGACAATAATTTGC
AGGCCGAGCAAAAAGCAGATGCCACCCAAGAATCTCAGCTAGGTCGTCCG
TCGACCCCACCATCCGACGAGTCGACGGAACAGACAACGTCTACCGAGAC
GAGCAGCAGCAGCAGGTCAAATGATGTAAGCCGGGGAAAACGTGTTAATA
AGAGTCCCCTTGGACGGAAAACGGCCAGGGCGCTCAGAAGAGCAACTGAC
GTCAACCAAAGTCCTACGAATGAAGAAAGCGGCGCGGGGGGTGGCCCAAA
GCCTGTCGGTGGTAAAGCGGGCTTCCCCGGCCGGGAAGAGAAGAAGGGCG
TGGAAGACGATGCGGTTGATCCCAACGCAATGCGAGGAGTCAAGGGGAGA
CACTCCGGCGACGATGCTGATTCTGTGGCCGACGGCTTGAGTAGGAAAGA
TGAAATCGCTCAGGCCGATGAGCGCGACGACACCGCAGAGGAACGATTCA
AGACCATGCGCAGGCGCACGAGGAATGCGAGCGAGGGGAAGACGAGGAAA
AGATCTTCGATAGATGTACGATCGGAGAGGCCCGGCGAAAGCCCCAGGTC
GGCTAGAGGCCCTTCATCTGACAAGGCGGCAGTCGGAGGGATGAGAGCTT
CCGCCGAGGCGGATTCGGGTGAGGGTGACGGCGGTCAATACATAGCGAAC
CAAAACGCGGACGCGAAGCAGGCGGGCAGGGTCCTACGAGGACATCAAGA
CAACTCCGATTCTACCAGGTTCAAAGAGTATGCATTTGTGCTCCCTGGTG
AGCTTGGTGTCCTCTTTAATAATGTCGGACTGTGGTAGATACAGGTGGTA
CCTTCGTTTTGGTTGGACGTAAACGTCGCGTCTTGGTACGTCTTTGCGTA
AATATATAGCTACGGTACCTGCTGAAGGAGCACTGAGGCTCTACAGATCA
GTTTTGAGTATTTCATCGCATCACACGCTAACTCAGTGGCGACGGGAGCA
GCGCACTCTCTCCACGATCGGGCGACGCGGAGGGCGGCCATATCGATGAC
GACGGAGGCGCCAATATTAGGAACCGTAGTGGGCAAGCGAAGAAATTAGG
GAAGGGGGAGACGAGAGGTTCACACGATGCTGCAGCTATAGCTGGTGGTG
ATCGAGAGGTCAGTTACAAAACAAAAACAAAAAGGTCACCGTATTGAAGG
AGGATTTTCGCTGATATCTCTGTTACTTGGTCGTGGACTAAGTTGATGGA
TGGAAATTGTCGGTGTCAGGAGCAAACACGTCACACGCTCGTGTAACCGC
CCAGTACTAGTGCAAGGCCTTTGACTGCTTCGTGCGCAATCGCTGAGGAG
GCAGGTGACGCTGGGACATGTCGTGGACAGAAAAATGCGGGAAATGGGGT
ACATTCGAAAGCCCGCCCTAGACAAGCTGAAGAACCGACGATCTTGGCGG
GATAGAGTTGCGGCGGAGGGCGTGCCCGAGGTGCGTTTCACGACTACCCA
CCAGATGCCAAGTAGGATTGACATCCGTAAGGAAATCGACGACTGCAGGC
AGTCAGCACGAAGAACATGGTAAATTTAATGGGCGTCGTACGATGCTGTA
CCCTGTACAAAGTTTTATTTTTATTTTTCTCCCTCCACCATCGCCTTCCT
TGCATAATGCTTACCTTGTCCGGGCTCGGTATGCACACCATCGGTTAAAA
ACAACACTCCCCTCCGCTGAACCATCTGTTTGGTTAGTTCTGAACAATCG
GTCGTCCAGTACTTGTCGTGGATAAGCGAGAGCGGCGTTTTGAACCCGTA
GGTGTAGTATATCAGCACACTCGCGGTATGTCGTACGGCGCTTTTAATGC
TGTAGTACCACACCAGGGATGTGTCGAGAGGAAGCAGAATATTTTGCAAA
CAAAACGGGAAATACTCGGAACTGCTTCGCTTCGGTAGACACACAGCGCT
TCACCGCTCATCAACCAAATGCGCGAATCGACAGGTCCACTTCATCGGGG
AGCTCTCCGGGGCGGAAGGCTTCGGGCCAGGCGTTTCTTGCCGCTTCCGC
GTAGAGGGCGGTCGTCACTGGACTTGCTTGGCGGGCCTTGAGGCAGGACA
GACGCACGTCGCTCATGCGGATCTGAGCGACTCATTTTGTCCCTGGAATC
ATCCAATCGACCTCCACTACACCACCAAAAGCATTCAGGTACGCTAGGTT
GCCTGACCCGATGGTGAATGGCGGTTTCATAAATGGACGCCGCCACGGAA
CTCGGGAAGAATCCCGCAAGTAAGCACCAGGTTCAGCCTGAGTATGGAGA
TGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCGCGAGACCAA
ATTCTCAGGCACGCACGGGGACAGGGGAACATTATTTTCCCTGTTCAGCT
GACCACGAACAGGATTGGCAACCTTACCCGGTTGATCCATACTCTGCTAT
ATGTGATGACCATACATTTCATTGTCAGACTCATGTTAAATCGTCCTAGG
GCGGAAAAACGTTTTGGCGACGAAAGAACATTAGTAGTATTATCAGTTAA
GAGCCGCCAGGGAATGATCTGTCCAACTCCCGGCGTTACGCTAACGTAAA
GGGTACGAGTCGCAGCCGGCCGGCTCGAACGGCGATTTTTCCAGCCTTAT
TTCGAGATAATTTGTCCCTTGAAACGTTTTGCCGCGAGATCACTCCACAA
CACCATCTTTCCGTGGGACCGACGACTTCCCCGGCAACGTTATCCGTTTA
CAGGGCTGGCCTAGACTCATGGTGCAAGTGTGGCAGTTGGACACATACGG
ACGTAACGTGCTCCGGGGGTACGGTTTCCGCCACTTGCCGTCGAACCCTG
GCTCCGCGGCAGTGTCACTGCCGTGCTGGCGGCCAACGGGTACCATGCAG
GTCAGATCAGCCGAGAGCGATCTGCTGCTTCCTTGCCCTGGAGGGCTCAG
CTGGTCTCCTCTGGAGGGGGGAGGGGGGGGGGGATATTGCTCGGAACAAC
CTATTTATTACTTTTTGTAGATGTCGATGTTTCCGAGTATTTTTTGCACC
ATTGCCGTTTTTCTTCTTTGCATGGAAAGTACACTGTACCTGGTACGTTT
TTCCCTTCCGGATTGTGTTTTTCTACCATACCTTGGGACCAGTGGGACCA
CAGGCTGGATTTCTGACATCAGCCTATGTGAGAATCCAATAAAAAAACAA
CAACCAATCAATCCCCCAAAAACACCACCTCGTCTTACACAAGCGCCCCC
CCGGCTAGCGGTGTTAAGCCCATGGCAGAAACGCTCGGGACGTCGTGACA
GCGCACCAACCCCCGTGTTGCGGTGGTTGTTCACCCCTGAGTGATCACCT
CGTCTGAGCCCCATATAACACTTACTGTCTTTTCAAGGAAACGTCAAATG
AAGCTTTTGCGTTCCATCACGAACATGGGCAATAATTTCTAACGAACGAT
GGAAAATCCCCGCTCGCGGCTCACAGGAAGAAACTGCCGCCTTTTTTCTC
GGGGTGACGCCTCGCCTGACAAGTGAGGACGTCGTTTTCAACAGAGCTTG
GGATCAGCGGTGTCGGCTCGTCACCCTTCCGGCGGGAACGGTCTGGATCG
AAGTGAATGTTCTCTTCCGGAACATGCAGGACCAAGACGTGGACAGCCTT
TTGTACGGCCACCAAAGTGTCCCACGAGGCGTTTGAGGAAAACCCACTTC
ACGTTCGCTCATTTTTGTCGTCGCGGGTGCTTGCGCCGGCGGCCGTGGTG
AACGCCACGCGGAAAAAACCATGGTAGACCTGGCGTTCGCTTGTCATACG
GCCACAACAGCAGCTAGATTCGGCGAGGGCAAAACATGTGTCGTCGGAGT
CAGTCGACCGCCTGGATCACGAGTTACACACAATTGCACATACAAGAATC
GATAACAAGACCTATCAATGCGCATAACTATAGTGAGATAACAGTAGCAG
CAGTCTCTGGGGTGGTAAGCGTTATAAACCAGATCGAACGACAACCAGCC
GCGACCGCTTGTTCGATCAAATCGGCGATCGATACGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig110:522232..526868+

>mRNA_F-serratus_M_contig110.952.1 ID=mRNA_F-serratus_M_contig110.952.1|Name=mRNA_F-serratus_M_contig110.952.1|organism=Fucus serratus male|type=CDS|length=2496bp|location=Sequence derived from alignment at F-serratus_M_contig110:522232..526868+ (Fucus serratus male)
ATGCGAGGAGTCAAGGGGAGACACTCCGGCGACGATGCTGATTCTGTGGC
CGACGGCTTGAGTAGGAAAGATGAAATCGCTCAGGCCGATGAGCGCGACG
ACACCGCAGAGGAACGATTCAAGACCATGCGCAGGCGCACGAGGAATGCG
AGCGAGGGGAAGACGAGGAAAAGATCTTCGATAGATGTACGATCGGAGAG
GCCCGGCGAAAGCCCCAGGTCGGCTAGAGGCCCTTCATCTGACAAGGCGG
CAGTCGGAGGGATGAGAGCTTCCGCCGAGGCGGATTCGGGTGAGGGTGAC
GGCGGTCAATACATAGCGAACCAAAACGCGGACGCGAAGCAGGCGGGCAG
GGTCCTACGAGGACATCAAGACAACTCCGATTCTACCAGATGCGAGGAGT
CAAGGGGAGACACTCCGGCGACGATGCTGATTCTGTGGCCGACGGCTTGA
GTAGGAAAGATGAAATCGCTCAGGCCGATGAGCGCGACGACACCGCAGAG
GAACGATTCAAGACCATGCGCAGGCGCACGAGGAATGCGAGCGAGGGGAA
GACGAGGAAAAGATCTTCGATAGATGTACGATCGGAGAGGCCCGGCGAAA
GCCCCAGGTCGGCTAGAGGCCCTTCATCTGACAAGGCGGCAGTCGGAGGG
ATGAGAGCTTCCGCCGAGGCGGATTCGGGTGAGGGTGACGGCGGTCAATA
CATAGCGAACCAAAACGCGGACGCGAAGCAGGCGGGCAGGGTCCTACGAG
GACATCAAGACAACTCCGATTCTACCAGTGGCGACGGGAGCAGCGCACTC
TCTCCACGATCGGGCGACGCGGAGGGCGGCCATATCGATGACGACGGAGG
CGCCAATATTAGGAACCGTAGTGGGCAAGCGAAGAAATTAGGGAAGGGGG
AGACGAGAGGTTCACACGATGCTGCAGCTATAGCTGGTGGTGATCGAGAG
TGGCGACGGGAGCAGCGCACTCTCTCCACGATCGGGCGACGCGGAGGGCG
GCCATATCGATGACGACGGAGGCGCCAATATTAGGAACCGTAGTGGGCAA
GCGAAGAAATTAGGGAAGGGGGAGACGAGAGGTTCACACGATGCTGCAGC
TATAGCTGGTGGTGATCGAGAGGTGACGCTGGGACATGTCGTGGACAGAA
AAATGCGGGAAATGGGGTACATTCGAAAGCCCGCCCTAGACAAGCTGAAG
AACCGACGATCTTGGCGGGATAGAGTTGCGGCGGAGGGCGTGCCCGAGGT
GACGCTGGGACATGTCGTGGACAGAAAAATGCGGGAAATGGGGTACATTC
GAAAGCCCGCCCTAGACAAGCTGAAGAACCGACGATCTTGGCGGGATAGA
GTTGCGGCGGAGGGCGTGCCCGAGGTCCACTTCATCGGGGAGCTCTCCGG
GGCGGAAGGCTTCGGGCCAGGCGTTTCTTGCCGCTTCCGCGTAGAGGGCG
GTCGTCACTGGACTTGCTTGGCGGGCCTTGAGGCAGGACAGACGCACGTC
GCTCATGCGGATCTGAGCGACTCATTTTGTCCCTGGAATCATCCAATCGA
CCTCCACTACACCACCAAAAGCATTCAGGTCCACTTCATCGGGGAGCTCT
CCGGGGCGGAAGGCTTCGGGCCAGGCGTTTCTTGCCGCTTCCGCGTAGAG
GGCGGTCGTCACTGGACTTGCTTGGCGGGCCTTGAGGCAGGACAGACGCA
CGTCGCTCATGCGGATCTGAGCGACTCATTTTGTCCCTGGAATCATCCAA
TCGACCTCCACTACACCACCAAAAGCATTCAGGGCTGGCCTAGACTCATG
GTGCAAGTGTGGCAGTTGGACACATACGGACGTAACGTGCTCCGGGGGTA
CGGTTTCCGCCACTTGCCGTCGAACCCTGGCTCCGCGGCAGTGTCACTGC
CGTGCTGGCGGCCAACGGGTACCATGCAGGGCTGGCCTAGACTCATGGTG
CAAGTGTGGCAGTTGGACACATACGGACGTAACGTGCTCCGGGGGTACGG
TTTCCGCCACTTGCCGTCGAACCCTGGCTCCGCGGCAGTGTCACTGCCGT
GCTGGCGGCCAACGGGTACCATGCAGGAAGAAACTGCCGCCTTTTTTCTC
GGGGTGACGCCTCGCCTGACAAGTGAGGACGTCGTTTTCAACAGAGCTTG
GGATCAGCGGTGTCGGCTCGTCACCCTTCCGGCGGGAACGGTCTGGATCG
AAGTGAATGTTCTCTTCCGGAACATGCAGGACCAAGACGTGGACAGCCTT
TTGTACGGCCACCAAAGTGTCCCACGAGGCGTTTGAGAAGAAACTGCCGC
CTTTTTTCTCGGGGTGACGCCTCGCCTGACAAGTGAGGACGTCGTTTTCA
ACAGAGCTTGGGATCAGCGGTGTCGGCTCGTCACCCTTCCGGCGGGAACG
GTCTGGATCGAAGTGAATGTTCTCTTCCGGAACATGCAGGACCAAGACGT
GGACAGCCTTTTGTACGGCCACCAAAGTGTCCCACGAGGCGTTTGA
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