mRNA_F-serratus_M_contig110.942.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig110.942.1
Unique NamemRNA_F-serratus_M_contig110.942.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig110contigF-serratus_M_contig110:304926..305831 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionkinesin (KAR3 subfamily)
Ec32 orthologEc-27_002410.2
Exons1
Model size906
Cds size906
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928964.4285817-CDS-F-serratus_M_contig110:304925..3058311622928964.4285817-CDS-F-serratus_M_contig110:304925..305831Fucus serratus maleCDSF-serratus_M_contig110 304926..305831 +
1690962649.026925-CDS-F-serratus_M_contig110:304925..3058311690962649.026925-CDS-F-serratus_M_contig110:304925..305831Fucus serratus maleCDSF-serratus_M_contig110 304926..305831 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig110.942.1prot_F-serratus_M_contig110.942.1Fucus serratus malepolypeptideF-serratus_M_contig110 304926..305831 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig110.942.1

>prot_F-serratus_M_contig110.942.1 ID=prot_F-serratus_M_contig110.942.1|Name=mRNA_F-serratus_M_contig110.942.1|organism=Fucus serratus male|type=polypeptide|length=302bp
GYPGCCCLSYFEMMRGKSPLSKGSEAASSYGKGVRENRADRGHHRARKLS
RGPSTLGTMGKASVSEKLSSVISGTDLENSEPDAAGAASVQSAIDSHRAN
VSTKKGGLEGSGAEGMLSAQCEAAISRRSSYSSSGAPLPVKSGDTVVADF
DGDAGIVRDDDGAKSLTSPNTLRASSMFASSNNSYGGCGSNRGRGSDCLT
NGEQGPAGIEILPAPAASSPVVVTATVVIPSQDQAEGTLHSNTVDADANG
TFKSEVAQILTGDSDGRVSVLCRFKCLQEEESLDSTRDWLRFSESASGEQ
AV
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mRNA from alignment at F-serratus_M_contig110:304926..305831+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig110.942.1 ID=mRNA_F-serratus_M_contig110.942.1|Name=mRNA_F-serratus_M_contig110.942.1|organism=Fucus serratus male|type=mRNA|length=906bp|location=Sequence derived from alignment at F-serratus_M_contig110:304926..305831+ (Fucus serratus male)
GGGTACCCGGGTTGTTGCTGCTTGTCGTATTTTGAGATGATGAGAGGCAA
GTCTCCGCTTTCCAAGGGTTCAGAAGCAGCTTCTTCTTACGGCAAGGGTG
TTAGGGAGAATCGCGCCGATCGCGGTCACCACCGCGCCCGTAAATTGAGT
CGAGGGCCAAGCACGTTGGGGACAATGGGGAAAGCGTCTGTTTCAGAGAA
ACTTTCATCCGTGATTTCGGGGACCGACTTGGAAAACAGCGAACCAGACG
CCGCAGGAGCTGCCAGTGTCCAAAGTGCCATCGACTCGCACAGGGCGAAT
GTTTCTACAAAGAAAGGTGGATTAGAGGGATCAGGAGCGGAGGGAATGCT
AAGTGCCCAATGCGAGGCGGCTATTTCTAGGCGATCCTCGTACTCCTCCT
CTGGGGCACCTCTGCCTGTCAAGTCGGGTGATACTGTTGTCGCCGACTTT
GACGGCGATGCCGGTATTGTCCGCGACGACGATGGGGCGAAATCGCTGAC
GTCTCCCAACACATTGCGTGCATCGAGCATGTTTGCCAGCAGCAACAACA
GTTATGGTGGCTGCGGTAGCAACCGCGGCAGAGGCAGCGATTGCCTGACT
AATGGCGAACAAGGCCCGGCGGGTATCGAAATCCTGCCGGCTCCGGCGGC
ATCCAGCCCGGTGGTAGTGACTGCAACAGTCGTTATCCCAAGTCAAGATC
AGGCAGAAGGAACTCTCCATTCCAATACCGTCGACGCCGATGCAAACGGA
ACCTTCAAGAGCGAAGTTGCTCAGATTCTCACGGGCGATTCTGACGGTCG
TGTGAGTGTCTTATGCCGCTTCAAGTGCCTCCAGGAGGAGGAGTCGCTCG
ACTCGACCCGCGATTGGCTGCGGTTCAGCGAAAGCGCCAGCGGGGAGCAG
GCCGTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig110:304926..305831+

>mRNA_F-serratus_M_contig110.942.1 ID=mRNA_F-serratus_M_contig110.942.1|Name=mRNA_F-serratus_M_contig110.942.1|organism=Fucus serratus male|type=CDS|length=1812bp|location=Sequence derived from alignment at F-serratus_M_contig110:304926..305831+ (Fucus serratus male)
GGGTACCCGGGTTGTTGCTGCTTGTCGTATTTTGAGATGATGAGAGGCAA
GTCTCCGCTTTCCAAGGGTTCAGAAGCAGCTTCTTCTTACGGCAAGGGTG
TTAGGGAGAATCGCGCCGATCGCGGTCACCACCGCGCCCGTAAATTGAGT
CGAGGGCCAAGCACGTTGGGGACAATGGGGAAAGCGTCTGTTTCAGAGAA
ACTTTCATCCGTGATTTCGGGGACCGACTTGGAAAACAGCGAACCAGACG
CCGCAGGAGCTGCCAGTGTCCAAAGTGCCATCGACTCGCACAGGGCGAAT
GTTTCTACAAAGAAAGGTGGATTAGAGGGATCAGGAGCGGAGGGAATGCT
AAGTGCCCAATGCGAGGCGGCTATTTCTAGGCGATCCTCGTACTCCTCCT
CTGGGGCACCTCTGCCTGTCAAGTCGGGTGATACTGTTGTCGCCGACTTT
GACGGCGATGCCGGTATTGTCCGCGACGACGATGGGGCGAAATCGCTGAC
GTCTCCCAACACATTGCGTGCATCGAGCATGTTTGCCAGCAGCAACAACA
GTTATGGTGGCTGCGGTAGCAACCGCGGCAGAGGCAGCGATTGCCTGACT
AATGGCGAACAAGGCCCGGCGGGTATCGAAATCCTGCCGGCTCCGGCGGC
ATCCAGCCCGGTGGTAGTGACTGCAACAGTCGTTATCCCAAGTCAAGATC
AGGCAGAAGGAACTCTCCATTCCAATACCGTCGACGCCGATGCAAACGGA
ACCTTCAAGAGCGAAGTTGCTCAGATTCTCACGGGCGATTCTGACGGTCG
TGTGAGTGTCTTATGCCGCTTCAAGTGCCTCCAGGAGGAGGAGTCGCTCG
ACTCGACCCGCGATTGGCTGCGGTTCAGCGAAAGCGCCAGCGGGGAGCAG
GCCGTCGGGTACCCGGGTTGTTGCTGCTTGTCGTATTTTGAGATGATGAG
AGGCAAGTCTCCGCTTTCCAAGGGTTCAGAAGCAGCTTCTTCTTACGGCA
AGGGTGTTAGGGAGAATCGCGCCGATCGCGGTCACCACCGCGCCCGTAAA
TTGAGTCGAGGGCCAAGCACGTTGGGGACAATGGGGAAAGCGTCTGTTTC
AGAGAAACTTTCATCCGTGATTTCGGGGACCGACTTGGAAAACAGCGAAC
CAGACGCCGCAGGAGCTGCCAGTGTCCAAAGTGCCATCGACTCGCACAGG
GCGAATGTTTCTACAAAGAAAGGTGGATTAGAGGGATCAGGAGCGGAGGG
AATGCTAAGTGCCCAATGCGAGGCGGCTATTTCTAGGCGATCCTCGTACT
CCTCCTCTGGGGCACCTCTGCCTGTCAAGTCGGGTGATACTGTTGTCGCC
GACTTTGACGGCGATGCCGGTATTGTCCGCGACGACGATGGGGCGAAATC
GCTGACGTCTCCCAACACATTGCGTGCATCGAGCATGTTTGCCAGCAGCA
ACAACAGTTATGGTGGCTGCGGTAGCAACCGCGGCAGAGGCAGCGATTGC
CTGACTAATGGCGAACAAGGCCCGGCGGGTATCGAAATCCTGCCGGCTCC
GGCGGCATCCAGCCCGGTGGTAGTGACTGCAACAGTCGTTATCCCAAGTC
AAGATCAGGCAGAAGGAACTCTCCATTCCAATACCGTCGACGCCGATGCA
AACGGAACCTTCAAGAGCGAAGTTGCTCAGATTCTCACGGGCGATTCTGA
CGGTCGTGTGAGTGTCTTATGCCGCTTCAAGTGCCTCCAGGAGGAGGAGT
CGCTCGACTCGACCCGCGATTGGCTGCGGTTCAGCGAAAGCGCCAGCGGG
GAGCAGGCCGTC
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