mRNA_F-serratus_M_contig110.940.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: D8LL91_ECTSI (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL91_ECTSI) HSP 1 Score: 423 bits (1088), Expect = 5.400e-145 Identity = 208/248 (83.87%), Postives = 222/248 (89.52%), Query Frame = 2
Query: 206 MAHSAPP--SAGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPSSRILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLELPAYPGSEQCVRLEEWGQTK 940
MA S PP S+GISLLTAE+SAALDADLMSTPGFSIDQLMELAGLSVACA+ KVYPP SR+LIVCGPGNNGGDGLVAARHLW FGYRP CLYPKPT RQLFTNLVEQCKQLDIEFL SW EA G+ G++D+VLD +FGFGFKG PRPPFDTIL DLS S + PVVS+DVPSGWSVDEGDS+G GLKPEML+SLTAPKLSARFF G HHFLGGRFVPPGI SKYSLELPAYPGSEQCVRLEEWGQ +
Sbjct: 1 MASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSW---EAAGDLGSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQR 245
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A6H5KSM4_9PHAE (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM4_9PHAE) HSP 1 Score: 360 bits (924), Expect = 2.290e-119 Identity = 189/250 (75.60%), Postives = 208/250 (83.20%), Query Frame = 2
Query: 77 MTSPRLSYLARILFISQAPKLSFIRPSVISQRLPVVS----RDFSASMAHSAPP--SAGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPSSRILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSAR 805
M S LSY+ R L I+QAP SF+RP + R + + ++SMA S PP S GISLLTAE+SAALDADLMSTPGFSIDQLMELAGLSVACA+ KVYPPSSR+LIVCGPGNNGGDGLVAARHLWHFGY+P CLYPKPT RQLFTNLVEQCKQLDIEFL SW EA G+ G+FD+VLD +FGFGFKG PRPPFDTIL DLS S + PVVS+DVPSGWSVDEGDS+GDGLKPEMLVSLTAPKLSAR
Sbjct: 1 MRSSSLSYVVRALAITQAPSSSFLRPLAVHSRSQLYNGRGLATATSSMASSQPPPSSFGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPSSRVLIVCGPGNNGGDGLVAARHLWHFGYKPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSW---EAAGDLGDFDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGDGLKPEMLVSLTAPKLSAR 247
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A813ENK1_POLGL (NAD(P)H-hydrate epimerase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ENK1_POLGL) HSP 1 Score: 296 bits (759), Expect = 3.660e-94 Identity = 149/231 (64.50%), Postives = 172/231 (74.46%), Query Frame = 2
Query: 233 GISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPP--SSRILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLELPAYPGSEQCVRL 919
G++ L E +AALD DLMSTPGFSIDQLMELAGLSVA AV + +PP S R L+VCGPGNNGGDGLVAARHLWHFGY P +YP RQLFTNLV QC+QL I L P +E + EG FD+ +D IFGF FKG PR PFD+IL L +SS+ +VS+D+PSGW V+ GD G+GL+P+ LVSLTAPK A F GRH FLGGRFVPPGI KY L LP YPG+ Q V L
Sbjct: 102 GVATLGREAAAALDEDLMSTPGFSIDQLMELAGLSVASAVLEAFPPKGSRRALLVCGPGNNGGDGLVAARHLWHFGYTPVVVYPVRPARQLFTNLVVQCEQLGIPVLTGMPTSEEVTEG--FDVAVDAIFGFSFKGTPRAPFDSILKTLRASSVKLVSVDIPSGWDVELGDVSGEGLRPDALVSLTAPKPCAADFSGRH-FLGGRFVPPGIAEKYGLRLPPYPGAAQVVEL 329
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A7S2S1N8_9STRA (NAD(P)H-hydrate epimerase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S1N8_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.370e-89 Identity = 134/225 (59.56%), Postives = 171/225 (76.00%), Query Frame = 2
Query: 269 LDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPSSRILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQ----LFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAP--RPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLE-LPAYPGSEQCVRLE 922
LDA+LM TPGFSIDQLMELAGLSVACAV V+P +S++L VCGPGNNGGD LV+ARHL+HFGY+P LYPK + L+ NL++QCK LDI + S P + + E +D+VLDG+FGF F G+ R P+D ++ L +++P+ SIDVPSGW V++GD+ GDG+KP MLVSLTAPKL A F G HH+LGGRF+PP + KY+L+ LP YPG++QCVRLE
Sbjct: 13 LDAELMQTPGFSIDQLMELAGLSVACAVAAVWPVASKVLTVCGPGNNGGDALVSARHLYHFGYKPVVLYPKAPKESGNGILYRNLLQQCKDLDIPVIDSVPESISQHE---YDVVLDGVFGFSFNGSNGVRAPYDKVMQVLKETNVPIASIDVPSGWDVEQGDAHGDGIKPSMLVSLTAPKLCASTFKGEHHYLGGRFLPPKLAVKYNLQGLPEYPGTDQCVRLE 234
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A507C3Q7_9FUNG (NAD(P)H-hydrate epimerase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C3Q7_9FUNG) HSP 1 Score: 280 bits (715), Expect = 6.330e-89 Identity = 139/232 (59.91%), Postives = 169/232 (72.84%), Query Frame = 2
Query: 236 ISLLTAENSAALDADLMSTP--GFSIDQLMELAGLSVACAVTKVYPPSS--RILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLELPAYPGSEQCVRL 919
I +L+A + ALD DLM+ GFS+DQLME+AGLS ACA+T+VY ++ R+L++ GPGNNGGD LVAARHL+HFGY+P LYPKPTQ+ ++ LV+QCK LDI F+ S GA N D+VLDGIFGF F G RPPFD I+ L SSIP+VSID+PSGW V++G+ GL PEML+SLTAPK A F G+HH+LG R VPP I KY L LP YPG EQCVRL
Sbjct: 3 IKMLSAPEALALDQDLMNKDIGGFSLDQLMEIAGLSCACALTQVYDRATFPRVLVIAGPGNNGGDALVAARHLFHFGYKPTILYPKPTQKDIYIGLVKQCKNLDIPFVDSVDGAIE-----NADVVLDGIFGFSFSGDIRPPFDNIIKTLKKSSIPIVSIDIPSGWDVEKGNVVSKGLDPEMLISLTAPKPCALHFRGKHHYLGLRIVPPFIDKKYGLNLPEYPGIEQCVRL 229
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A7S0WQ09_9CHLO (NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQ09_9CHLO) HSP 1 Score: 283 bits (724), Expect = 8.840e-89 Identity = 140/234 (59.83%), Postives = 173/234 (73.93%), Query Frame = 2
Query: 233 GISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPSS--RILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEG-GNFDLVLDGIFGFGFKGAPRPPFDTILNDLS--SSSIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLELPAYPGSEQCVRL 919
GI+ L + + A+D +LM GFS+DQLMELAGLSVAC++ +VYP +S ++LI+ GPGNNGGDGLVAARHL HFGY P YPKPT + L+ LV QCK L I F+ + E L + G FD+VLD +FGF FKG PRPPF ILN L ++ P+VS+D+PSGW V++GD G GL+P+MLVSLTAPK AR F G HHFLGGRFVPP I +KYSL+LPAYPG+ CVR+
Sbjct: 101 GITYLKQDEAVAVDEELMGPLGFSVDQLMELAGLSVACSLAEVYPSTSHPKVLIIAGPGNNGGDGLVAARHLHHFGYTPTICYPKPTDKVLYNGLVTQCKSLRIPFITA---EELLAQPIGAFDVVLDAMFGFSFKGDPRPPFAAILNALKPPANPPPIVSVDIPSGWQVEQGDVDGGGLRPDMLVSLTAPKECARTFEGPHHFLGGRFVPPEIATKYSLKLPAYPGTAMCVRI 331
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A0D2ZSE1_BRAOL (NAD(P)H-hydrate epimerase n=5 Tax=Brassica TaxID=3705 RepID=A0A0D2ZSE1_BRAOL) HSP 1 Score: 283 bits (723), Expect = 2.240e-86 Identity = 147/272 (54.04%), Postives = 183/272 (67.28%), Query Frame = 2
Query: 128 APKLSF-IRPSVISQRLPVVSRDFSASMAHSAP---PSAGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPS--SRILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSS-SSIPV-VSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLELPAYPGSEQCVRL 919
+PK + + P +QR S F S P SA +S L+ +A +D LM GFS+DQLMELAGLSVA +V +VY PS SR+L +CGPGNNGGDGLVAARHL HFGY+P YPK T + L+T LV Q + L + F++ E L E +FD+++D IFGF F GAPRPPFD I+ L + PV VS+D+PSGW V+EGD G G+KP+MLVSLTAPKL A+ F G HHFLGGRFVPP + KY LELP+YPG+ CVR+
Sbjct: 26 SPKHQYSLLPLTTTQRFLTASHSFRTLSTKSIPNMQDSASVSYLSQREAAEIDETLMGPLGFSVDQLMELAGLSVATSVAEVYKPSEYSRVLAICGPGNNGGDGLVAARHLHHFGYKPSICYPKRTSKSLYTGLVTQLESLSVPFVSVEDLPEDLSE--DFDVIIDAIFGFSFHGAPRPPFDAIIRRLQTLQKRPVIVSVDIPSGWHVEEGDHEGGGIKPDMLVSLTAPKLCAKSFSGPHHFLGGRFVPPSVAEKYKLELPSYPGTSMCVRI 295
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A836CPB5_9STRA (NAD(P)H-hydrate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPB5_9STRA) HSP 1 Score: 273 bits (697), Expect = 2.350e-85 Identity = 133/249 (53.41%), Postives = 174/249 (69.88%), Query Frame = 2
Query: 242 LLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPSSRILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSRGDG----LKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLE-LPAYPGSEQCVRLEEWGQTKGENTAGEGKLE 973
LL A+++ LD +LM++PGFSIDQLMELAGLSVAC+V KVY PS ++L+VCGPGNNGGDGLVAARHL+HFGY P YPK T + ++TNLV Q QL++ + PG L +F+ +LD IFGF F GA RPPFD+++ + S +P+ S+D+PSGW V+EG + G ++P++L+SLTAPK +R F GRHHFLGGRF+ P + KY L LP YPG+EQCV + G + G G E
Sbjct: 44 LLQAKDAIKLDEELMTSPGFSIDQLMELAGLSVACSVAKVYSPS-KVLVVCGPGNNGGDGLVAARHLFHFGYEPVVYYPKRTSKPIYTNLVHQLDQLNVPIVPEMPGPAELKS--DFNFILDCIFGFSFSGAVRPPFDSVIAAMVQSGVPIASVDIPSGWDVNEGSTSSTGDTPSIEPDVLISLTAPKPCSRLFKGRHHFLGGRFLTPKLAQKYGLTWLPRYPGTEQCVEV-------GGDLGGSGSSE 282
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A061S844_9CHLO (NAD(P)H-hydrate epimerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S844_9CHLO) HSP 1 Score: 280 bits (717), Expect = 6.310e-85 Identity = 143/262 (54.58%), Postives = 179/262 (68.32%), Query Frame = 2
Query: 221 PPS-----AGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAVTKVYPPSS--RILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEG---GNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSSSIP--VVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYSLELPAYPGSEQCVRLEEWGQTKGENTAGEGKL 970
PPS A IS L E + +D +LM GFS+DQLMELAGLSVAC++ VYPP+ R+ ++CGPGNNGGDGLVAARHL+HFGY + YPKPT + LF LV QC+ L I F+ + E L +G FDLV+D +FGF FKG+PRPPFD IL LS ++ P + +D+PSGW V++GD G GL+P+ML+SLTAPK AR F G HH+LGGRFVPP +V KY L LP +PGS QCVR+ G TA + +L
Sbjct: 105 PPSSTDREAEISYLGQEEAVEVDKELMGPLGFSVDQLMELAGLSVACSIADVYPPAQAPRVAVICGPGNNGGDGLVAARHLYHFGYTVQVCYPKPTSKPLFDGLVTQCRSLGIGFVTT----EELLQGPMAARFDLVVDAMFGFSFKGSPRPPFDAILAALSPAASPPRLACVDIPSGWHVEDGDQTGVGLRPDMLISLTAPKRGARGFSGAHHYLGGRFVPPAVVEKYHLRLPPFPGSAQCVRI--GGSAAQRGTAADREL 360
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Match: A0A8K1FI83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI83_PYTOL) HSP 1 Score: 269 bits (688), Expect = 1.200e-84 Identity = 132/227 (58.15%), Postives = 164/227 (72.25%), Query Frame = 2
Query: 272 DADLMSTP-GFSIDQLMELAGLSVACAVTKVYPPSS--------RILIVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASWPGAEALGEGGNFDLVLDGIFGFGFKGAPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSRGDGLKPEMLVSLTAPKLSARFFHGRH--HFLGGRFVPPGIVSKYSLELPAYPGSEQCVRL 919
D +LMS+ GFSIDQLMELAGLSVACA+ K +P R+LIV GPGNNGGD LVAARHL HFGY P LYPK + + LF LV QC+QL+I F+ ++A+ +FDL+LDGIFGF F+GA RPPFDTI+ + S P+VSID+PSGW V+ GD G GL P+ML+SLTAPKL A+FF G+ H++GGRFVPP + ++ LELP YPG EQC+R+
Sbjct: 20 DEELMSSKYGFSIDQLMELAGLSVACAIGKEFPLEQVNAVDVMKRVLIVAGPGNNGGDALVAARHLKHFGYSPSILYPKKSSKPLFQGLVTQCQQLEIPFVEGLNDSKAVDA--DFDLILDGIFGFSFEGAIRPPFDTIIQTIRGCSSPIVSIDIPSGWHVERGDEHGVGLNPKMLISLTAPKLCAQFFSGQDKIHYIGGRFVPPALAKEFDLELPQYPGIEQCIRV 244 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig110.940.1 >prot_F-serratus_M_contig110.940.1 ID=prot_F-serratus_M_contig110.940.1|Name=mRNA_F-serratus_M_contig110.940.1|organism=Fucus serratus male|type=polypeptide|length=301bp MTSPRLSYLARILFISQAPKLSFIRPSVISQRLPVVSRDFSASMAHSAPPback to top mRNA from alignment at F-serratus_M_contig110:287358..291054- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig110.940.1 ID=mRNA_F-serratus_M_contig110.940.1|Name=mRNA_F-serratus_M_contig110.940.1|organism=Fucus serratus male|type=mRNA|length=3697bp|location=Sequence derived from alignment at F-serratus_M_contig110:287358..291054- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig110:287358..291054- >mRNA_F-serratus_M_contig110.940.1 ID=mRNA_F-serratus_M_contig110.940.1|Name=mRNA_F-serratus_M_contig110.940.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig110:287358..291054- (Fucus serratus male)back to top |