mRNA_F-serratus_M_contig110.939.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig110.939.1
Unique NamemRNA_F-serratus_M_contig110.939.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A6H5KSL4_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL4_9PHAE)

HSP 1 Score: 972 bits (2513), Expect = 0.000e+0
Identity = 671/1408 (47.66%), Postives = 800/1408 (56.82%), Query Frame = 3
Query:  888 LSLPPGARLLSGI--STNNPSFPVRAPWRPPGYRWGVSLLSKKSTTSSGEQAKDKARGDVDQDLRDFSTYVAVREPSSN----------FDLEMDKIVTMENIEPD----------ARGVAISSNLTTARSRLMTRLGM----KGAQGSQEDEGEAIKETDSVSDPNQGEGWSEAEVE----------EGFDPGTRDRDMPWWQGGAAALLGVGAVLYRPIVNRLPWIFADAPPADEIARPERQNLVEAMASESTLPRSTAEAVAGPTILRTTGEETIAESSQNDTQVRLEDAERNADSNLKAEEEKEATEPNASPSDRTRGAILRGLTTTA----------LYKLKTTSRRARLWVLLRRRSRARAKPLLPGVDSDINTL------SVPLASLEK----------MSPLGGNPALSLPQASVVQDADTLQNEAAPFVESNDKVPQAMDGGGGWNFFAFFPKDK--DEQPSNSTDTGAVPATARNNAKNSAPATTQVSSLEEKDPLEESVVINSTKGKKQAT--------------------------------------------------AWPGSAFVEGLDPRAQIESAMAQYLRSTFGYGTGEPATGVTEETLAAAAAAAGDAALLEGQKHLEAKAXXXXXXXXXXXXXXXXXXXXPTARYLDDLYPASDEETVARWSGSEAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATYNVAAPFGQAEEEDE-GWQVTGSMKKGKTDAGE--FGKGKLTVKPRSLDPQKASDMIIDPVSSNSLRRSVARDEGIRGNRSPGARLLSTAMRRPRLPRRRKSKAAGATLDRVTPSRD-----VEMQENTLRRLGRVGVTEIASSMLLIASEMASQVGSVEELELFREEGGMPRLLMALSPIPYTTKADGLEAIRNLLRVSPESVAAEILETAGNEALFELRRLVGAPGEPWSSAAAQXXXXXSDSFDAMRLQAEAVQVLQELSLASDEALSKVRELPNLIPALSSIVYPGSGLLGTLRDNIGRSLGGMSGFTGS--------------------TGRADAA-RRKEEAVSAQAVSAAAKLLSMLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDLLANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEELRRALDG 4682
            LSLPP A  L     S+  P+   RAPWRPPGYRWG SL+S  S    GE  +  A  D             V   S+            D +  K      ++            AR +++   L T    + TRL +    +     ++D  +   + +SV +      W+  EV           +G         +PWWQ GAA L+GVGA LYRP VNRLP +         + + E++        E                 R  G  ++ +++++    +L           +  EE     P   P+         G T++           + +  T SRRARLW LL+RRSRARA+PLL  VD+ I +L      S P+   E             P+GG          V +   T  +E +         PQA+ GG GWN F FFPKDK  D  P+     G  P                                                                                            AWP SA+++GLDPRAQ+E+AM   LRS FGYG   P  GV  ETL AA  AAG+AA+ EG K L                                              G  AAA XXXXXXXXXXXXXXXXXX         TAAT+NVAAPF + +E  E  WQVTGS KK K    +  FGKGKL V+ R +DP KA DM +D  S++ ++RSV  D  ++      ARL S A+ R  LPRR KS+A+ A  DR   S       V+ Q+ TLRRLGRVGV EIASSMLLIASE A +V S+EEL  FR+EGGMPR+LMALSP PYTTKA G+ AIRNLLRVSPESVA E+LE  G E L ELRRLVGAPGEPWSSAAA+     SD  DAMRLQAEAVQ+LQELSLAS++AL++VR+LPNL+PALS+I YPG G LG LR  IGRSLG + G  G                      GR  AA RRKE AV+  AVS A+KLLSMLGVH W PRQPGQKGLRILSLDGGGTRGVLTIA+LRE+L+G DKDVHEVFDVICGTSTGGILAMLFA+EKQSLAS T +YDSL+VKIF KDLLANAKLVL QAQYSS  WEA+LE+ILG+RRMIDT++ P+NPKVVICSTI+NV+PLEMMLWRNYG+ P+QE  YKGDYRR+MRECVRATTAAPSFFTPLVDG+MMYADGAF+ANNPTSIA+TEAKLL+P+VPIECVLSVGTG+Y P   + GMSW TV+NQLVNSATDTEGVD+MLKTFLPR QYFRFN  I+ F+IDE R E+L+ELK LAKEY  RP++KARAEELRR L G
Sbjct:  259 LSLPPAAAALRRTDGSSPGPAPAGRAPWRPPGYRWGKSLVSNMSGLPDGESERVTAATDXXXXXXXGRQVAGVGAASAGTGWSPSAXXXXDEQGGKTEATRGVQGQQEEAQQQQLSARRMSVFRALATTAGGVATRLPLMKKSRSEDAQEQDSPDQAYKRNSVGE------WASVEVSPPASKGANGAQGXXXXXXXXXVPWWQAGAAVLVGVGAALYRP-VNRLPGL---------LLKDEKEXXXXXXQGEEG---------------RQQGTLSLVDATKSPASFQL----------ARPAEEGALVPPEPRPNPXXXXPPAAGTTSSGSRARQGVAGLVDRAATMSRRARLWTLLKRRSRARAEPLLASVDTSIMSLTPSELLSPPVEEQETALSSSSGRGPQEPVGGGAGGVAASVGVGKGDATTTSEVS--------APQAV-GGAGWNLFGFFPKDKFSDYLPA-----GPSPVVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAWPKSAWLKGLDPRAQVEAAMRDALRSAFGYGLVAPTAGVPAETLEAATLAAGNAAVAEGAKQL--------------------------------------------LEGKRAAAGXXXXXXXXXXXXXXXXXXVA-------TAATFNVAAPFRRLDENSEDSWQVTGSWKKDKNMKADEDFGKGKLGVRTRKIDPAKAMDMDLDKFSTH-IKRSVPSDGQVQRQVPRSARLFSAAVERSHLPRRWKSRASPAFRDREGSSSSPSSPPVDRQDATLRRLGRVGVVEIASSMLLIASETAMEVDSLEELGQFRQEGGMPRVLMALSPTPYTTKASGIAAIRNLLRVSPESVAGEVLEETGTEGLLELRRLVGAPGEPWSSAAARAAAAASDRLDAMRLQAEAVQLLQELSLASEDALARVRDLPNLVPALSAIAYPGIGPLGLLRGRIGRSLGNVGGLAGXXXXXXXXXXXXXXXXXXXXXVGRVGAAQRRKEAAVAEAAVSGASKLLSMLGVHHWTPRQPGQKGLRILSLDGGGTRGVLTIALLREVLKGLDKDVHEVFDVICGTSTGGILAMLFASEKQSLASATTLYDSLIVKIFKKDLLANAKLVLQQAQYSSTDWEAILEDILGDRRMIDTMTLPNNPKVVICSTIMNVDPLEMMLWRNYGYRPEQEPPYKGDYRRKMRECVRATTAAPSFFTPLVDGNMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVGTGFYVPTRKEPGMSWGTVLNQLVNSATDTEGVDSMLKTFLPRDQYFRFNAPIQPFDIDETRVEKLDELKALAKEYTQRPDIKARAEELRRLLRG 1559          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: D8LL86_ECTSI (Similar to Calcium-independent phospholipase A2-gamma, C terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL86_ECTSI)

HSP 1 Score: 539 bits (1389), Expect = 7.730e-172
Identity = 267/326 (81.90%), Postives = 296/326 (90.80%), Query Frame = 3
Query: 3705 MLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDLLANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEELRRALDG 4682
            MLGVH W PRQPGQKGLRILSLDGGGTRGVLTIA+LRE+L+GFDKDVHEVFDVICGTSTGGILAMLFA+EKQSLAS T MYDSL+VKIF KDLLANAKLVL QAQYSS  WEA+LE+ILG+RRMIDT++ P+NPKVVICSTI+NV+PLEMMLWRNYG+ P+QE  YKGDYRR+MRECVRATTAAPSFFTPLVDG MMYADGAF+ANNPTSIA+TEAKLL+P+VPIECVLSVGTG+Y P   + GMSW TV+NQLVNSATDTEGVD+MLKTFLPR QYFRFN  I+ F+IDE R E+L+ELK LAKEY  RPE+KARAEELRR L G
Sbjct:    1 MLGVHHWTPRQPGQKGLRILSLDGGGTRGVLTIALLREVLKGFDKDVHEVFDVICGTSTGGILAMLFASEKQSLASATTMYDSLIVKIFKKDLLANAKLVLQQAQYSSTDWEAILEDILGDRRMIDTMTLPNNPKVVICSTIMNVDPLEMMLWRNYGYRPEQEPPYKGDYRRKMRECVRATTAAPSFFTPLVDGKMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVGTGFYVPTRKEPGMSWGTVLNQLVNSATDTEGVDSMLKTFLPRDQYFRFNAPIQPFDIDETRVEKLDELKALAKEYTQRPEIKARAEELRRLLRG 326          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A4D9CW07_9STRA (PNPLA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW07_9STRA)

HSP 1 Score: 344 bits (882), Expect = 3.340e-100
Identity = 190/423 (44.92%), Postives = 265/423 (62.65%), Query Frame = 3
Query: 3414 SFDAMRLQAEAVQVLQELSLASDEALSKVRELPNLIPALSSIVYPGSGLLGTLRDNIGRSLGGMSGFTGSTGRADAARRKEEAVSAQAVSAAAKLLSMLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDL--LANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSP---DNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEELR 4667
            S + +R Q  A+ +L  + LAS+ A+  ++    LIPAL  I          LR+ +    G MS +                          KLLS++G H W+PRQ GQKGLRILSLDGGGTRGV+TIA+L  +++   K+VHE+FD+ICGTSTGGILA LFA +   +     +YD L+ KIF K    LA + LVL  AQY+   WE VL+ ++GE  +IDT+  P   + PK  + S++++ NP ++ +WRNY +   Q + Y+GD+R ++RE +RATTAAP++F PLV G M+++DGA +ANNPT+IAI EAK+++P+VPIE V+SVGTG         G  W  + NQ++NSAT+TE V   L  FLP+ +Y+RFNP+I+  +IDEIRPE+L  LK  AKEY   P  K R ++ R
Sbjct:  126 SIEELRCQRAAIYLLYTMCLASERAIEALQTEGRLIPALQQI----------LRERLFEE-GPMSVY----------------------HTIHKLLSIVGYHEWKPRQAGQKGLRILSLDGGGTRGVMTIALLSHLIEATGKEVHELFDIICGTSTGGILAALFAVKATKVKEAGRLYDELIKKIFNKSPAPLAYSNLVLRTAQYNENVWEDVLKVLIGETLLIDTMGGPQGLNTPKFFVLSSVLSCNPAKLFMWRNYNYRRAQRSRYEGDFRAKVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVGTGNVLEPQPVEGFGWAPIFNQIINSATNTEAVHDSLADFLPQDRYYRFNPNIENVSIDEIRPEKLAYLKATAKEYFQDPRNKERLDQCR 515          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A835YX58_9STRA (Calcium-independent phospholipase-like protein A2-gamma, C terminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX58_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.160e-89
Identity = 160/329 (48.63%), Postives = 212/329 (64.44%), Query Frame = 3
Query: 3705 MLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDLLANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQ---LSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEELRRALDG 4682
            MLG   W P+  GQKGLRIL  DGGGTRGVLTIA+L+ I+    ++  +VFD++ GTSTG I+A L   E   LA   AMYD+L+  IF K      KL L QA Y    W A+L  ILG++ MID   +P  PKV   ST+I+VNP ++ LWRNY +       Y G YR  +RE +RATTAAP+FF+PL+    +Y+DGA MANNPT++A+ EAK ++P VP+E V+S+GTG +  Q    S   + W+ +VNQL++SAT+TE  + ++   +P  QYFRFNP +    IDE RPERL  LKEL+  Y   P  +A+ +ELRR L G
Sbjct:    1 MLGATEWVPKTRGQKGLRILCFDGGGTRGVLTIAMLKRIMAEVGREPAQVFDIVVGTSTGAIVAALAGLECFPLAQCEAMYDALIKDIFQKSPSGGVKLALKQAFYDEENWMAILRSILGDKAMIDYADTPLAPKVAFPSTVISVNPSKLWLWRNYNYPTGHAGRYSGSYRHTVRESLRATTAAPTFFSPLLINGTLYSDGALMANNPTAVALHEAKHIYPGVPVELVVSLGTGCFFEQARDFSDPAVGWDGIVNQLISSATETENTNDIMSDLVPAQQYFRFNPRMTDMAIDETRPERLAFLKELSDRYFEEPATRAQLDELRRPLQG 329          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: K8Z805_NANGC (Calcium-independent phospholipase a2-gamma n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z805_NANGC)

HSP 1 Score: 323 bits (828), Expect = 3.340e-88
Identity = 189/450 (42.00%), Postives = 264/450 (58.67%), Query Frame = 3
Query: 3414 SFDAMRLQAEAVQVLQELSLASDEALSKVRELPNLIPALSSIVYPGSGLLGTLRDNIGRSLGGMSGFTGSTGRADAARRKEEAVSAQAVSAAAKLLSMLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDL--LANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSP---DNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQLSKAGMSWNTVVNQLVNS--------------------------ATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDE--IRPERLNELKELAKEYVARPEVKARAEEL 4664
            S + +R Q  A+ +L  + LAS+ A+  ++    LIPAL  I          LR+ +    G MS +                          KLLS++G H W+PRQ GQKGLRILSLDGGGTRGV+TIA+L  +++   K+VHE+FD+ICG STGGILA LFA +   +     +YD L+ KIF K    LA + LVL  AQY+   WE VL+ ++GE  +IDT+  P   + PK  + S++++ NP ++ +WRNY +   Q + Y+GD+R ++RE +RATTAAP++F PLV G M+++DGA +ANNPT+IAI EAK+++P+VPIE V+SVGTG         G  W  + NQ++NS                          AT+TE V   L  FLP+ +Y+RFNP+I+  +IDE  IRPE+L  LK  AKEY   P  K R ++L
Sbjct:  496 SIEELRCQRAAIYLLYTMCLASERAIEALQTEGRLIPALQQI----------LRERLFEE-GPMSVY----------------------HTIHKLLSIVGYHEWKPRQAGQKGLRILSLDGGGTRGVMTIALLSHLIEATGKEVHELFDIICGNSTGGILAALFAVKATKVKEAGRLYDELIKKIFNKSPAPLAYSNLVLRTAQYNENVWEDVLKVLIGETLLIDTMGGPQGLNTPKFFVLSSVLSCNPAKLFMWRNYNYRRAQRSRYEGDFRAKVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVGTGNVLEPQPVEGFGWAPIFNQIINSCHTSITVNFTPFPFFILPRSLRFSVSATNTEAVHDSLADFLPQDRYYRFNPNIENVSIDEVGIRPEKLAYLKATAKEYFQDPRNKERLDQL 912          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A0G4F2X6_VITBC (PNPLA domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2X6_VITBC)

HSP 1 Score: 329 bits (843), Expect = 3.360e-87
Identity = 216/567 (38.10%), Postives = 318/567 (56.08%), Query Frame = 3
Query: 3132 EMASQVGSVEELELFREEGGMPRLLMALSPIPYTTKADGLEAIRNLLRVSPESVAAEILETAGNEALFELRRLVGAPGEPWSSAAAQXXXXXSDSFDAMRLQAEAVQVLQELSLASDEALSKVRELPNLIPALSSIVYPGSGLLGTLRDNIGRSLGGM-SGFTGSTGRADAARRKEEAVSAQAVSAAAKLLSMLGVHT-WRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDL--LANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPD-QETVYKGDYRRRMRECVRATTAAPSFFTPL-VDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVAR-PEVKARAEELRRALDGP-PPSAREVELQAEIRGLRQPGDLPQ-----PGGRMKARDRGV 4793
            E+ ++V + ++++  RE G +  L  AL       +A  L  +  +    P +  A+++   G     EL  ++    EP                 A++ Q  A+ +L  ++L+SD  +  ++    + P L  I+    G           S G + S +    G+ D   +++     + +  A KLL+ +G +  W PR PGQ+GLRIL LDGGGTRGVLTIAIL+ I+    ++VHEVFD+ICGTSTGGI+AML   +K S+  V  +YD+L+  IF KD   ++ A+LV+ QA Y    WE +LE  LG+ RMIDT + PD PK    ST+++ NP  ++LWRNY + P+ ++  Y G +R R R+ +RATTAAP+FF  L +DG+  Y DGA +ANNPT+IA+ EAK LFPD PIE ++SVGTG +P Q     + W+ +VNQLV SAT+TEG   ML  FLP  +YFRFNP I+++ IDE  P +L+++K  A  Y    P+ + R ++L        PP +  +       G+  PG  P+     PG R + R  GV
Sbjct: 1233 ELVAKVVAPDQMDHIREYG-LGALFKALRKGKPQLQAKALRTLTLITETDPST--ADVIVRKG-----ELGPILKVLEEPEWRGPRSILANERHRAHALQAQRAALHLLCTMALSSDRVIWALQTDSRVAPLLRRILVQAGG--------TNPSAGVVKSRWAKWQGKDDKPLQRD----LERIRTANKLLAAMGCNNDWHPRVPGQRGLRILCLDGGGTRGVLTIAILKFIVAVMGREVHEVFDIICGTSTGGIIAMLLGVQKSSVNEVEVLYDNLIKDIFVKDPGPISGARLVVKQAYYDETAWELILENTLGDIRMIDTAADPDVPKTFCLSTMVSANPSSLILWRNYNYPPNGRQGKYAGSFRIRCRDALRATTAAPTFFPALRLDGEA-YGDGALLANNPTAIALAEAKALFPDTPIEAIVSVGTGRFPQQSYGGRVGWDGIVNQLVCSATNTEGTHEMLSEFLPEDKYFRFNPKIEMWAIDETDPGKLDQMKRFAARYFEDIPDNRRRLQQLAELCRAKLPPGSGGIRA-----GVTLPGSSPKQSRMPPGYRGERRRSGV 1773          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A7S2R4X2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4X2_9STRA)

HSP 1 Score: 290 bits (743), Expect = 7.690e-81
Identity = 146/308 (47.40%), Postives = 205/308 (66.56%), Query Frame = 3
Query: 3708 LGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDLLANA-KLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTG-YYPPQLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEY 4625
            LGV  WRPR P  KG+R+L LDGGGTRGVLTIA+L++I +   KD+HE+FDV+ GTSTG I+A L   +   +     +YD LV +IF K++++   KL + QA Y    WE +L  + GE+RMID+ SS  +  V+  +T+I+V+P +M + RN+ +   QE+ Y GDYR ++R  +R+TTAAP+ FTPLV   + Y DGAF ANNPT++A  EA+ LFPDV +E VLS+G+G ++  ++      W+ +VNQLV S+TDT  V   L++FLP   YFRFNP ++   IDE  P  L E K  A+E+
Sbjct:  209 LGVRKWRPRSPHHKGVRVLCLDGGGTRGVLTIAVLQQISRAIGKDIHEIFDVVAGTSTGAIIACLIGLKHTPIDECAKLYDQLVSEIFVKNVISGPIKLGIRQAYYDEKNWERILLRLCGEQRMIDSTSSATSIAVMCLATVISVDPAKMFVARNFNYARSQESRYLGDYRWQVRHALRSTTAAPTIFTPLVLNGVTYCDGAFFANNPTAVAYYEAQKLFPDVEVELVLSIGSGTFHEVEMESYEFGWDKLVNQLVESSTDTHRVHETLESFLPSDMYFRFNPRMRCIPIDETNPSALQEHKIAAREF 516          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A6H5KXR6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR6_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 1.140e-77
Identity = 152/329 (46.20%), Postives = 210/329 (63.83%), Query Frame = 3
Query: 3693 KLLSMLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFD-KDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDLLANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQ----LSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEEL 4664
            K L+ LG H WRP+  GQKG+RIL  DGGGTRGVLT+A+L+ + +    +  HEVFD+I GTSTGGI+A L   +   +A    MYDSL+ KIF K      KL L QA Y    W  +L  ILG+  M+D+   P  P ++  ST I+ NP ++MLWRNY + P  +  Y G +R  +R+ +RATTAAP+FF PL+    +Y+DGA + NNP+++A  EAK  FP VPIE ++S+GTG +  +    L  AG+ W+ ++NQ++ SAT+TE    ++   LP  Q+FRFNP +    IDE+R ERL+ LK LA EY   PE +AR +E+
Sbjct:  904 KCLAALGAHQWRPKMRGQKGVRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQAFYDEVGWMKILNSILGDMLMVDSAQDPLRPLIICPSTTISSNPAKVMLWRNYNYPPGHQGRYHGSFRHMVRQAIRATTAAPTFFPPLMINGALYSDGALLCNNPSAVAFHEAKHAFPGVPIEMIVSIGTGCFFEEKREFLEPAGLGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMTDMPIDEVRKERLDWLKTLANEYFETPENQARLQEM 1232          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: D7FNE8_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE8_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 4.870e-77
Identity = 152/329 (46.20%), Postives = 210/329 (63.83%), Query Frame = 3
Query: 3693 KLLSMLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFD-KDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKDLLANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPPQ----LSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEEL 4664
            K L+ LG H WRP+  GQKG+RIL  DGGGTRGVLT+A+L+ + +    +  HEVFD+I GTSTGGI+A L   +   +A    MYDSL+ KIF K      KL L QA Y    W  +L  ILG+  M+D+   P  P ++  ST I+ NP ++MLWRNY + P  +  Y G +R  +R+ +RATTAAP+FF PL+    +Y+DGA + NNP+++A  EAK  FP VPIE ++S+GTG +  +    L  AG+ W+ ++NQ++ SAT+TE    ++   LP  Q+FRFNP +    IDE+R ERL+ LK LA EY   PE +AR +E+
Sbjct: 1017 KCLAALGAHQWRPKTRGQKGVRILCFDGGGTRGVLTLALLKHLEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQAFYDEVGWMKILNSILGDMLMVDSAQDPLRPLIICPSTTISSNPAKVMLWRNYNYPPGHQGRYHGSFRHMVRQAIRATTAAPTFFPPLMINGALYSDGALLCNNPSAVAFHEAKHAFPGVPIEMIVSIGTGCFFEEKREFLEPAGLGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMTDMPIDEVRKERLDWLKTLANEYFETPENQARLQEM 1345          
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Match: A0A4D9DA09_9STRA (PNPLA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA09_9STRA)

HSP 1 Score: 291 bits (744), Expect = 2.150e-76
Identity = 169/415 (40.72%), Postives = 235/415 (56.63%), Query Frame = 3
Query: 3429 RLQAEAVQVLQELSLASDEALSKVRELPNLIPALSSIVYPGSGLLGTLRDNIGRSLGGMSGFTGSTGRADAARRKEEAVSAQAVSAAAKLLSMLGVHTWRPRQPGQKGLRILSLDGGGTRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLASVTAMYDSLVVKIFTKD-LLANAKLVLWQAQYSSATWEAVLEEILGERRMIDTISS-PDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRECVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIECVLSVGTGYYPP-QLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQYFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEEL 4664
            R Q  AV+VL +L LASD+A+S  ++   L  AL  +   G    G+                                     +   KLL+ LG + WRPRQPGQ+GLRILS DGGGTRGVL++A+L+++++   KDV E FDVICGTSTGGILA+LF  E++++    A+YD LV KIF    L+   KL+L  + Y    WE VL+++LG+  MID++   P +PKV   S  +  NP  + +WR                         ATTAAP+FF+PL   D  Y DGAF+ANNPT++A+ E + L+P VP+ECV+S+GTG +   + +  G  W  +VN L+N AT+TE     L  FLP+ +Y+RFNP  + F +DE +PERL  +K +A+EY  + E K R  EL
Sbjct:  875 RGQRAAVEVLFQLVLASDKAISLAQKDGRLWNALQQMTADGMYAAGS----------------------------------PTFATCHKLLAALGHNEWRPRQPGQRGLRILSFDGGGTRGVLSVALLKQVMKRVGKDVFETFDVICGTSTGGILAVLFGIERRTVDEAEALYDKLVSKIFASSPLIQTTKLLLRTSYYDEVVWEQVLQDMLGDDLMIDSMGEGPLSPKVFCASLSLKTNPASLYIWR-------------------------ATTAAPTFFSPLEREDAKYCDGAFLANNPTAVALNEVRTLYPGVPVECVVSIGTGVHVDNRKADGGYGWEGIVNDLINCATNTEVTHQTLSAFLPKSKYYRFNPQTEFFPLDETKPERLARMKSIAREYFWQSENKERMNEL 1230          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL4_9PHAE0.000e+047.66PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LL86_ECTSI7.730e-17281.90Similar to Calcium-independent phospholipase A2-ga... [more]
A0A4D9CW07_9STRA3.340e-10044.92PNPLA domain-containing protein n=1 Tax=Nannochlor... [more]
A0A835YX58_9STRA1.160e-8948.63Calcium-independent phospholipase-like protein A2-... [more]
K8Z805_NANGC3.340e-8842.00Calcium-independent phospholipase a2-gamma n=2 Tax... [more]
A0A0G4F2X6_VITBC3.360e-8738.10PNPLA domain-containing protein n=1 Tax=Vitrella b... [more]
A0A7S2R4X2_9STRA7.690e-8147.40Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5KXR6_9PHAE1.140e-7746.20PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FNE8_ECTSI4.870e-7746.20Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A4D9DA09_9STRA2.150e-7640.72PNPLA domain-containing protein n=2 Tax=Monodopsid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig110contigF-serratus_M_contig110:267468..278403 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score543.5
Seed ortholog evalue3.4e-151
Seed eggNOG ortholog2880.D8LL86
Preferred namePNPLA8
KEGG koko:K16815
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001516,GO:0001676,GO:0003674,GO:0003824,GO:0004620,GO:0004623,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006644,GO:0006650,GO:0006690,GO:0006692,GO:0006693,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008610,GO:0009056,GO:0009058,GO:0009395,GO:0009987,GO:0010876,GO:0012505,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0016042,GO:0016053,GO:0016298,GO:0016787,GO:0016788,GO:0017076,GO:0019369,GO:0019637,GO:0019752,GO:0030554,GO:0031090,GO:0031903,GO:0031984,GO:0032309,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033036,GO:0033559,GO:0034638,GO:0035639,GO:0036094,GO:0036151,GO:0036152,GO:0042175,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043651,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046337,GO:0046338,GO:0046394,GO:0046434,GO:0046456,GO:0046457,GO:0046470,GO:0046475,GO:0046486,GO:0046503,GO:0046717,GO:0046903,GO:0046942,GO:0047499,GO:0050482,GO:0051179,GO:0051234,GO:0052689,GO:0071702,GO:0071704,GO:0071715,GO:0072330,GO:0097159,GO:0097164,GO:0097367,GO:0098588,GO:0098805,GO:0098827,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901571,GO:1901575,GO:1901576,GO:1903963
EggNOG free text desc.phosphatidylethanolamine catabolic process
EggNOG OGsKOG4231@1,KOG4231@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons14
Model size6506
Cds size4962
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig110.939.1prot_F-serratus_M_contig110.939.1Fucus serratus malepolypeptideF-serratus_M_contig110 268980..278371 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928966.2848291-UTR-F-serratus_M_contig110:267467..2689791622928966.2848291-UTR-F-serratus_M_contig110:267467..268979Fucus serratus maleUTRF-serratus_M_contig110 267468..268979 -
1690962649.837459-UTR-F-serratus_M_contig110:267467..2689791690962649.837459-UTR-F-serratus_M_contig110:267467..268979Fucus serratus maleUTRF-serratus_M_contig110 267468..268979 -
1622928966.539292-UTR-F-serratus_M_contig110:278371..2784031622928966.539292-UTR-F-serratus_M_contig110:278371..278403Fucus serratus maleUTRF-serratus_M_contig110 278372..278403 -
1690962650.0339012-UTR-F-serratus_M_contig110:278371..2784031690962650.0339012-UTR-F-serratus_M_contig110:278371..278403Fucus serratus maleUTRF-serratus_M_contig110 278372..278403 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928966.3056028-CDS-F-serratus_M_contig110:268979..2693071622928966.3056028-CDS-F-serratus_M_contig110:268979..269307Fucus serratus maleCDSF-serratus_M_contig110 268980..269307 -
1690962649.850031-CDS-F-serratus_M_contig110:268979..2693071690962649.850031-CDS-F-serratus_M_contig110:268979..269307Fucus serratus maleCDSF-serratus_M_contig110 268980..269307 -
1622928966.324374-CDS-F-serratus_M_contig110:269326..2694101622928966.324374-CDS-F-serratus_M_contig110:269326..269410Fucus serratus maleCDSF-serratus_M_contig110 269327..269410 -
1690962649.8591652-CDS-F-serratus_M_contig110:269326..2694101690962649.8591652-CDS-F-serratus_M_contig110:269326..269410Fucus serratus maleCDSF-serratus_M_contig110 269327..269410 -
1622928966.3422878-CDS-F-serratus_M_contig110:269750..2698511622928966.3422878-CDS-F-serratus_M_contig110:269750..269851Fucus serratus maleCDSF-serratus_M_contig110 269751..269851 -
1690962649.8753686-CDS-F-serratus_M_contig110:269750..2698511690962649.8753686-CDS-F-serratus_M_contig110:269750..269851Fucus serratus maleCDSF-serratus_M_contig110 269751..269851 -
1622928966.36193-CDS-F-serratus_M_contig110:270398..2705301622928966.36193-CDS-F-serratus_M_contig110:270398..270530Fucus serratus maleCDSF-serratus_M_contig110 270399..270530 -
1690962649.8845239-CDS-F-serratus_M_contig110:270398..2705301690962649.8845239-CDS-F-serratus_M_contig110:270398..270530Fucus serratus maleCDSF-serratus_M_contig110 270399..270530 -
1622928966.3778017-CDS-F-serratus_M_contig110:271561..2717051622928966.3778017-CDS-F-serratus_M_contig110:271561..271705Fucus serratus maleCDSF-serratus_M_contig110 271562..271705 -
1690962649.9015346-CDS-F-serratus_M_contig110:271561..2717051690962649.9015346-CDS-F-serratus_M_contig110:271561..271705Fucus serratus maleCDSF-serratus_M_contig110 271562..271705 -
1622928966.3936634-CDS-F-serratus_M_contig110:272204..2723961622928966.3936634-CDS-F-serratus_M_contig110:272204..272396Fucus serratus maleCDSF-serratus_M_contig110 272205..272396 -
1690962649.9138434-CDS-F-serratus_M_contig110:272204..2723961690962649.9138434-CDS-F-serratus_M_contig110:272204..272396Fucus serratus maleCDSF-serratus_M_contig110 272205..272396 -
1622928966.4071274-CDS-F-serratus_M_contig110:272511..2726731622928966.4071274-CDS-F-serratus_M_contig110:272511..272673Fucus serratus maleCDSF-serratus_M_contig110 272512..272673 -
1690962649.9292917-CDS-F-serratus_M_contig110:272511..2726731690962649.9292917-CDS-F-serratus_M_contig110:272511..272673Fucus serratus maleCDSF-serratus_M_contig110 272512..272673 -
1622928966.4199896-CDS-F-serratus_M_contig110:272845..2730011622928966.4199896-CDS-F-serratus_M_contig110:272845..273001Fucus serratus maleCDSF-serratus_M_contig110 272846..273001 -
1690962649.95095-CDS-F-serratus_M_contig110:272845..2730011690962649.95095-CDS-F-serratus_M_contig110:272845..273001Fucus serratus maleCDSF-serratus_M_contig110 272846..273001 -
1622928966.435535-CDS-F-serratus_M_contig110:273128..2733861622928966.435535-CDS-F-serratus_M_contig110:273128..273386Fucus serratus maleCDSF-serratus_M_contig110 273129..273386 -
1690962649.9602327-CDS-F-serratus_M_contig110:273128..2733861690962649.9602327-CDS-F-serratus_M_contig110:273128..273386Fucus serratus maleCDSF-serratus_M_contig110 273129..273386 -
1622928966.4575276-CDS-F-serratus_M_contig110:273815..2740131622928966.4575276-CDS-F-serratus_M_contig110:273815..274013Fucus serratus maleCDSF-serratus_M_contig110 273816..274013 -
1690962649.9732795-CDS-F-serratus_M_contig110:273815..2740131690962649.9732795-CDS-F-serratus_M_contig110:273815..274013Fucus serratus maleCDSF-serratus_M_contig110 273816..274013 -
1622928966.474855-CDS-F-serratus_M_contig110:274363..2744861622928966.474855-CDS-F-serratus_M_contig110:274363..274486Fucus serratus maleCDSF-serratus_M_contig110 274364..274486 -
1690962649.9876435-CDS-F-serratus_M_contig110:274363..2744861690962649.9876435-CDS-F-serratus_M_contig110:274363..274486Fucus serratus maleCDSF-serratus_M_contig110 274364..274486 -
1622928966.4907863-CDS-F-serratus_M_contig110:274682..2749011622928966.4907863-CDS-F-serratus_M_contig110:274682..274901Fucus serratus maleCDSF-serratus_M_contig110 274683..274901 -
1690962650.0031743-CDS-F-serratus_M_contig110:274682..2749011690962650.0031743-CDS-F-serratus_M_contig110:274682..274901Fucus serratus maleCDSF-serratus_M_contig110 274683..274901 -
1622928966.5091703-CDS-F-serratus_M_contig110:275229..2758171622928966.5091703-CDS-F-serratus_M_contig110:275229..275817Fucus serratus maleCDSF-serratus_M_contig110 275230..275817 -
1690962650.0154214-CDS-F-serratus_M_contig110:275229..2758171690962650.0154214-CDS-F-serratus_M_contig110:275229..275817Fucus serratus maleCDSF-serratus_M_contig110 275230..275817 -
1622928966.5262308-CDS-F-serratus_M_contig110:276094..2783711622928966.5262308-CDS-F-serratus_M_contig110:276094..278371Fucus serratus maleCDSF-serratus_M_contig110 276095..278371 -
1690962650.024519-CDS-F-serratus_M_contig110:276094..2783711690962650.024519-CDS-F-serratus_M_contig110:276094..278371Fucus serratus maleCDSF-serratus_M_contig110 276095..278371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig110.939.1

>prot_F-serratus_M_contig110.939.1 ID=prot_F-serratus_M_contig110.939.1|Name=mRNA_F-serratus_M_contig110.939.1|organism=Fucus serratus male|type=polypeptide|length=1654bp
MLSIMRLVLPWSQGGSTQPSLAPRAADGSIEIDVRETYGNGDEEGLVFET
IMSMVKLGWPWSEQDTNDARSPPVSIDVEGNQGIAPREEAVQVGEKQDGV
EESIFTAILSTINLGWAWLQGNSNDEAVSEADGWEPPIGLPGLREKRSSR
SVPLAPEKASNRGWWLLGWGRGEEDQAEGKTGRQPKEVQKLSRNTTDRLR
PTTSISASGIPQLPPSPSSTPPYRDGAVTVNRSVREASATPSRGPYPRII
AAVIRPALIVRNKFRRNVGVPATVYSFSGFAPSTVLSLPPGARLLSGIST
NNPSFPVRAPWRPPGYRWGVSLLSKKSTTSSGEQAKDKARGDVDQDLRDF
STYVAVREPSSNFDLEMDKIVTMENIEPDARGVAISSNLTTARSRLMTRL
GMKGAQGSQEDEGEAIKETDSVSDPNQGEGWSEAEVEEGFDPGTRDRDMP
WWQGGAAALLGVGAVLYRPIVNRLPWIFADAPPADEIARPERQNLVEAMA
SESTLPRSTAEAVAGPTILRTTGEETIAESSQNDTQVRLEDAERNADSNL
KAEEEKEATEPNASPSDRTRGAILRGLTTTALYKLKTTSRRARLWVLLRR
RSRARAKPLLPGVDSDINTLSVPLASLEKMSPLGGNPALSLPQASVVQDA
DTLQNEAAPFVESNDKVPQAMDGGGGWNFFAFFPKDKDEQPSNSTDTGAV
PATARNNAKNSAPATTQVSSLEEKDPLEESVVINSTKGKKQATAWPGSAF
VEGLDPRAQIESAMAQYLRSTFGYGTGEPATGVTEETLAAAAAAAGDAAL
LEGQKHLEAKASTGRAPALDGEKEMEGESASPTARYLDDLYPASDEETVA
RWSGSEAAAAAAGAAAGAVMDAAGVAAGVAADVAAAATAATYNVAAPFGQ
AEEEDEGWQVTGSMKKGKTDAGEFGKGKLTVKPRSLDPQKASDMIIDPVS
SNSLRRSVARDEGIRGNRSPGARLLSTAMRRPRLPRRRKSKAAGATLDRV
TPSRDVEMQENTLRRLGRVGVTEIASSMLLIASEMASQVGSVEELELFRE
EGGMPRLLMALSPIPYTTKADGLEAIRNLLRVSPESVAAEILETAGNEAL
FELRRLVGAPGEPWSSAAAQAAQAASDSFDAMRLQAEAVQVLQELSLASD
EALSKVRELPNLIPALSSIVYPGSGLLGTLRDNIGRSLGGMSGFTGSTGR
ADAARRKEEAVSAQAVSAAAKLLSMLGVHTWRPRQPGQKGLRILSLDGGG
TRGVLTIAILREILQGFDKDVHEVFDVICGTSTGGILAMLFAAEKQSLAS
VTAMYDSLVVKIFTKDLLANAKLVLWQAQYSSATWEAVLEEILGERRMID
TISSPDNPKVVICSTIINVNPLEMMLWRNYGFGPDQETVYKGDYRRRMRE
CVRATTAAPSFFTPLVDGDMMYADGAFMANNPTSIAITEAKLLFPDVPIE
CVLSVGTGYYPPQLSKAGMSWNTVVNQLVNSATDTEGVDTMLKTFLPRHQ
YFRFNPSIKLFNIDEIRPERLNELKELAKEYVARPEVKARAEELRRALDG
PPPSAREVELQAEIRGLRQPGDLPQPGGRMKARDRGVIEVRSTLFPDGLT
VCSYNGFRLGYWFVHIMLSVGVGLCFFGRHGRQIVLPRCTGRTGKGLELQ
VQQ*
back to top

mRNA from alignment at F-serratus_M_contig110:267468..278403-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig110.939.1 ID=mRNA_F-serratus_M_contig110.939.1|Name=mRNA_F-serratus_M_contig110.939.1|organism=Fucus serratus male|type=mRNA|length=10936bp|location=Sequence derived from alignment at F-serratus_M_contig110:267468..278403- (Fucus serratus male)
GGGGACAGGAAGGAAAGCTAGCCGCTGGTGCTATGTTATCTATTATGAGG TTAGTGTTGCCTTGGTCTCAAGGAGGATCTACGCAGCCATCGCTTGCGCC GCGTGCCGCCGACGGTAGTATCGAGATCGACGTGCGGGAGACTTACGGCA ATGGTGACGAAGAGGGCCTAGTCTTCGAGACGATTATGTCCATGGTAAAG CTTGGGTGGCCCTGGTCCGAACAAGACACGAATGACGCCCGATCGCCGCC CGTGTCGATTGACGTCGAGGGTAATCAAGGCATAGCTCCGCGGGAAGAAG CGGTCCAAGTTGGAGAAAAGCAGGACGGCGTTGAGGAGTCAATATTCACC GCGATACTTTCTACCATTAATCTTGGGTGGGCTTGGTTGCAGGGGAACTC CAACGACGAGGCGGTGTCGGAGGCGGACGGGTGGGAGCCGCCGATAGGGT TGCCAGGACTGCGAGAAAAACGATCTTCTCGATCCGTTCCCCTTGCCCCA GAGAAAGCGAGCAATAGAGGGTGGTGGCTCTTGGGTTGGGGACGAGGTGA GGAGGATCAAGCGGAGGGCAAGACCGGCCGCCAACCCAAAGAAGTGCAGA AGTTATCGAGGAATACCACTGACCGGTTACGGCCAACAACCAGTATCAGT GCGTCAGGAATACCCCAACTGCCACCCTCGCCATCATCGACTCCACCGTA TCGTGACGGAGCTGTGACAGTAAACCGTTCAGTCAGAGAAGCTTCTGCGA CCCCGAGTCGTGGTCCTTACCCCCGGATCATAGCGGCTGTCATTCGGCCG GCGTTGATCGTTCGGAACAAGTTCCGTAGAAATGTTGGTGTCCCGGCAAC GGTCTATTCTTTTTCCGGCTTCGCGCCCTCAACGGTATTGTCGCTACCGC CGGGTGCCCGACTTCTGAGTGGTATCAGTACAAACAACCCTTCATTCCCT GTTCGGGCGCCTTGGCGCCCCCCGGGATACCGATGGGGGGTGTCACTGTT GTCCAAGAAGTCCACTACGTCATCTGGAGAGCAAGCTAAGGACAAAGCAA GGGGGGATGTTGATCAAGACTTGCGAGATTTCTCAACTTATGTTGCGGTG AGGGAGCCGTCGTCGAACTTCGATTTAGAAATGGATAAAATAGTAACCAT GGAAAACATCGAACCCGATGCTCGGGGTGTAGCCATCAGCAGCAATCTTA CGACGGCAAGAAGCCGTCTCATGACTCGTCTCGGAATGAAAGGTGCACAG GGTTCCCAAGAAGATGAAGGTGAAGCGATCAAGGAGACCGACTCAGTTTC CGACCCAAATCAAGGGGAAGGTTGGTCGGAGGCCGAGGTGGAAGAAGGAT TTGACCCTGGTACACGCGACAGAGATATGCCTTGGTGGCAAGGAGGGGCC GCAGCTTTACTCGGTGTCGGCGCGGTGCTCTACCGGCCCATCGTAAATAG GTTGCCGTGGATCTTTGCCGACGCACCACCAGCCGACGAGATTGCGCGCC CTGAACGTCAAAATCTCGTCGAGGCAATGGCCAGCGAAAGCACGCTTCCG CGTTCCACTGCGGAAGCAGTCGCTGGTCCAACGATATTGCGAACGACTGG GGAGGAAACGATTGCCGAGTCTAGCCAAAATGATACACAGGTTCGATTGG AAGATGCTGAACGGAACGCGGACTCTAACTTAAAGGCGGAGGAGGAGAAG GAGGCAACCGAACCGAACGCGTCTCCTTCTGATCGGACCAGGGGGGCTAT TCTGAGAGGCTTGACAACCACTGCGTTGTACAAGTTGAAGACGACATCCA GGAGAGCACGGCTTTGGGTGCTGTTGAGACGCAGATCAAGGGCACGCGCG AAGCCGTTGTTACCAGGGGTGGACAGTGACATCAATACTCTATCTGTGCC GCTGGCATCCCTCGAGAAAATGTCGCCTTTGGGGGGGAATCCTGCACTAA GTCTGCCGCAGGCGAGCGTGGTCCAGGATGCCGATACGCTGCAAAACGAG GCGGCGCCCTTTGTAGAAAGTAATGATAAGGTTCCTCAGGCGATGGATGG CGGTGGCGGCTGGAACTTTTTCGCCTTCTTTCCCAAGGATAAAGATGAAC AACCGAGCAACTCCACGGATACTGGTGCGGTACCTGCGACCGCCAGAAAC AATGCCAAGAACAGTGCCCCGGCAACGACACAAGTTTCGTCTCTCGAAGA AAAGGATCCTTTGGAGGAAAGTGTGGTTATTAATAGTACTAAAGGAAAGA AGCAGGCGACGGCATGGCCAGGATCGGCGTTTGTCGAGGGACTAGACCCA AGGGCACAGGTAAGCGCGGGTCCCCGCCAAGATATTTCACCCATGTGAAC GAGGATTGGCGGTAGTGTCACACGCCTTAAAATCCTTCGCACCCAACACC TTTATAATTTGCACCGTAGTTTCTTCGTCGTAATATTGCTTTTGTTTTGT TTTATATCAGGCCCAGGCCCGCACACTAACGGTAGAGATGGCTTGCCTTG ACAAAGAAAGCGCCATTCTGCCGCGGTTTTGTTTCCTGATACCAAACCCG CTCTGGTGAACACGTTGCCCGCTCACGTATGAGCAGATCGAGTCTGCAAT GGCGCAGTATCTCCGCTCCACGTTTGGATACGGCACTGGAGAGCCAGCTA CAGGGGTCACAGAAGAAACACTTGCCGCCGCCGCTGCAGCTGCAGGAGAT GCGGCCCTGCTGGAGGGGCAGAAACATCTGGAAGCGAAAGCGAGTACCGG GCGTGCTCCCGCGCTCGACGGGGAGAAAGAAATGGAAGGGGAAAGTGCCA GCCCCACAGCTCGCTACTTGGACGATCTTTATCCGGCCAGCGACGAAGAA ACCGTTGCCAGATGGTCGGGGTCCGAGGCGGCGGCCGCTGCGGCAGGGGC AGCCGCGGGAGCTGTCATGGACGCCGCGGGAGTAGCCGCCGGGGTCGCAG CCGACGTGGCGGCAGCTGCCACTGCCGCTACGTATAATGTTGCGGCGCCG TTCGGGCAAGCGGAAGAGGAGGATGAGGGTTGGCAAGTTACCGGGAGCAT GAAGAAGGGCAAGACAGATGCTGGCGAGTTTGGCAAAGGGAAGCTAACCG TGAAGCCCAGGAGTCTCGATCCGCAGAAAGCATCCGACATGATAATCGAC CCCGTCTCGTCCAACAGCCTACGGGTGGGTAAGAGTGATCGATTGTTGCA TCTTCTTCGGTCTAGGGCACAAAATATGCGGTTCGTCCCCACGAGGACGG TATAGGCGTGGCGATGCAAAGGGCTTCTGGATATCGTTCCACGATTCACT CATTCTCCATTGGAACAGACACGTACGTACACATTCCGTGCCATGAGTCG AGAAAAATACCAGGCTTGATGATTCGTTTGACGCGTCGCCCGTGGGACGA GTCTGTCAACACGCACCCTATTTTTGCGTATATCGCAACGTGCACACTAC CCGTCCATACCCTGCCTCATCTATCACGACGACGTCCGCGATCGACGACC AGCGGAGCGTCGCTAGGGATGAAGGGATACGGGGGAACCGATCTCCAGGC GCAAGGCTCTTGTCCACGGCCATGAGGCGCCCGCGCTTGCCGCGAAGGAG GAAATCTAAGGCTGCAGGGGCAACCCTTGACCGAGTGACGCCGTCGAGAG ACGTAGAAATGCAGGAGAACACGCTGCGGCGACTTGGCAGGGTTGGTGTG ACCGAGATAGCATCAAGCATGGTGAGGGGGAAGAGAATGGCTACGTGACG CAATCGAGTAAGATGTAAGATGTGTTCCCTCTGACCTCATTTACTGGGTG AAAGACCTTCCCCGACGGTTTTCAGATTCGTCAACCCGCACGCCAACGTA CGTGCGTCGCTTCACCTCGCGGGCGCCTCCCTCTCCCATCCTGTTATTTC CCTTCTTGTCGACGCAGCTCCTGATCGCTTCTGAGATGGCCTCGCAGGTC GGTTCCGTGGAAGAGCTCGAGCTTTTCCGCGAAGAAGGCGGCATGCCTAG GCTGCTCATGGCGCTCTCTCCCATCCCTTATACGACAAAGGTATATTTCG AGACCATTTATCATAACGCGCCAAAGTCGTCTCTAGAACCCAATAAATGT AGATTCGGGAAGGCTCGTTTCGGCTGATGCACATCCGCCCGTCGTCATAT ACACCAGGAAGCAGTGAAAAATGTACAGCGTTGGTGTGACTGGATCGCGT ACACAAACCCTTTAGCAAGTCTGGCCCTTCAAGCCTGAAACCGCCCTTGT GGTCTAATATAACATATCATGGAGTACGCTCACGACTCGATCCTAGCCTT ATGTCAATGCGCCTGCAGCTGAAAAGAGAAGCAAGCAAACGCAAGAGTAT CCTCCCATTCCATTGCTACTGCTTCTTGGGCGCCCGCTAGGCCGACGGTC TCGAGGCAATCCGTAACCTGTTACGCGTCTCCCCGGAGTCGGTGGCTGCG GAGATACTGGAGACAGCCGGGAACGAGGCTCTCTTTGAGCTCCGACGGCT AGTGGGAGCTCCTGGCGAGCCATGGTCTTCGGCGGCGGCACAGGCGGCAC AGGCGGCCAGTGACAGCTTCGACGCGATGAGACTGCAGGTGCATTCGATT CCGTTGACCTTGTACAGAGGTGCTCTTTTCCCCTTTTATGATATCTCAGA CGCGAGCCAAGGTAACTCGTGATGAAAAGCGACGTTTTTCGTGTTTGGTT TCGACTGCATCAGCGTCGATGCGTCACCGACGCCTAGCACCGTCCAATGA CGAGGTTGCTCCTTGAAAATGGCGTCGTTCCAGTCATTTTCGTTGTCTAG CGATTTTGCGAGTTCTCAACGAGGGTAGATACATTCTGTGATCGATGCGA TAACTGCTGGATCCACACCACGAAAAGATTGGGGGGGGGGGGGGGGGCTT TTGGTGCACATCTCCATTCACCATCCTCGCGTACGATACGATAGACGTAT CTTGGCTGAATCTTGAGAAATCGAAACGCATCGCATCGCCCCCTTCGCCC CCAACATGCTGCGGCAGGCCGAGGCTGTGCAAGTTCTTCAGGAGCTGTCT CTCGCCAGCGATGAAGCGCTGTCGAAGGTCAGGGAGCTTCCCAACCTCAT CCCCGCCCTCAGTTCAATCGTCTACCCGGGTTCAGGTCTTCTGGGCACCC TCAGAGACAATATCGGGCGATCGCTGGGGGGCATGAGTGGCTTTACGGGC AGTACGGGGCGGGCAGACGCAGCGCGACGCAAGGAAGAGGCTGTTTCGGC GCAGGCTGTGTCCGCAGCGGCTAAGGTGTGTACAACCGCGCGCGCCCGTT TGTGAGTGATTTGCGGTCAAACGCGGCATGTGACCGTCTGGAATGACGTT CGTATTGCCACGTTATGCTGCACTCTAATGTTTCCACGCCTTGATCGTGC AGCTGCTGTCGATGCTGGGAGTTCACACGTGGAGGCCAAGACAACCTGGA CAGAAGGGACTGAGAATACTTTCTCTGGACGGGGGCGGAACCCGGGGAGT ATTGACCATCGCTATTCTTAGGGAAATTCTTCAAGGCTTTGACAAGGACG TGCACGAGGTTAGGGGAGGCTTCTGGCGCGGAAAAACGCTCGCGAACGAA GGGTTGACGAGCGCAGGTTCGTGCGTGGGTGCGATGTTTACCGTTACAGA AAGATCGTGCGGACACGTGAACGTACCTGATGGCACTCTCTTGGATGCCC CACGCGCTCCCGCTGTCCTACACCGAAAAGGTTTTTGACGTCATTTGTGG GACCTCTACGGGGGGTATACTGGCGATGCTCTTCGCCGCGGAGAAGCAAT CGCTTGCCTCGGTAACCGCCATGTACGACTCCCTGGTAGTAAAGATCTTC ACGAAAGACCTCCTCGCCAACGCGAAGCTCGTCCTTTGGCAGGTGGGCAG GGGAAAACGACGATAATGTCGTTGTTGGTCCAACGTCTTGTCATCATGTT TCTGACACGCCCCGAGCGTGTCTCTGACGCCACGCCTCGACGCCTGTCTG TATTCAGGCCCAGTACTCCAGCGCAACCTGGGAAGCCGTTCTGGAGGAAA TACTGGGCGAGCGGCGAATGATCGACACCATAAGCAGCCCCGACAATCCA AAGGTCGTCATCTGCTCCACCATAATAAACGTCAATCCTTTGGAAATGAT GTTGTGGAGAAACTACGGCTTCGGTCCAGACCAAGAGACCGTATACAAGG TAATCTACGAAACGACTGGTGTGTGCGGCGGGGCCGTCGAGTCGGAGAAG GCGGTCGGTCCCCGACGTTAACGGCTTGGTTCTTGCGCCAGGTTGCACCG AGTCCGTTTTAACTGTCTTCTAGGCGAAAGATGGCGGATCCGGCGTATGT ATTTCCTCAAAAGGAATCGGTCCATGCTCTTTAATGACTCCTTTCAGTAT TCCTCGGGACTGTTCTAGGGAAAAGCCTCCGTCGCGATTTTTCGCTCTCC CGCTCGAGCATGGCTCGATTTTCGTCAAGATGCGGTAGAGCTGAGTGTGT TTGAAGGTCTGTTCGGAACAACTTTGGCGATGAGAATAGCTAACGATGAT ATATATCAGTACGCCTGCTTCACTCGCGCGGACATAGAACCAACGTTCGG CGTGAAGCCCCGCCCCCGCCCCCCAGCATAATAGGTCAAGTAATGAAAAA AGGAAAAATTAAATGAATTTGATGTGTGACTGTCTCTTGGCCAAGCAGGG GGACTACAGACGGAGGATGCGCGAGTGTGTAAGGGCCACCACGGCGGCGC CGTCGTTCTTCACCCCGCTGGTGGATGGAGACATGATGTACGCCGACGGC GCATTCATGGCAAATAACCCCACGTCCATCGCAATCACCGAGGTGCGCTT CTCGGAAGCTCTTGTCTTGCTTTTTTTATGACTTGCGGTTGGAAAGAAGC GCGAATGTTGTCAACTCGGTGCCGTTGCTCGTGTTTTTGACTTTTGATAG ATTTATATCGTGTTCAGTACCAGGTTTTCACTTCCGGAATAATGCTACAA ACTATCTTTCGGAGGGTTTCGACCAAACCCCCTGTTCTGCCCTTCGGTGA CAGAACCTGTAATCAACGCTGTATAGTGCGCGTTCCGTTCCGACAATCGC GCGAGAGCGTACCGTACGCGAAGGAGGTTACATATCTACCCTTCCAGCTA TTGGAAAACTGCCAGATGAGGGTCGACGGGAATAAACTCCCCCATATGTG TTTTGTTTCGTTTTTGTTTTGTTTTTCCCTTTGACCCGGTCTATGGCCAC CCACACTAGCCAGCGCTGACAAGATCTACAGTAGTGGATAGTGGAAGTGA TTTGATGCTGCCCTACACAAAAGATTACGTTGGATGGGGGGTCGATTGCC AGTGACCCCCGTTTTTATCAGTTCGACATCCTTGATCGAGCAGTAACAAC TGGCTGGAACGGAAGAGCTGTAAATTAATTTGGCAACTTCGCGGATGGTG CGCTCACTCGCCACGGATGTGGGGACCGAACGCGGGTGACGACGCAGAGG CGAGATCGGGTGTTTAATCGGATCCCCCTCCTCCCTCTCCCTCCGATTCA GCTTTCACCTTTAATCTTTCATCGGATGTAGGTTAGTTACATCCTTCATC TATTAATAGGAGCATTTGCTAGGGTGAGCGGAGCTTGACCAAAGACGGAA GTCAACGTAGTTTGTGAGTTACCAATCATTCACAGCGTGGATCAAGCCTT GGGGGGGGAATTGCGCACGGCGTTCAGACTCTTTTGAATGTTATCGCTGC CGGAGATTTCGTCTCTAGTGCAAATGTCGGAGTCGCTGCTAACCAATGGC GACCGCGTAACCAGTCCGAACTGACCTTTTACTTTCTCCCGGGGCCGTTG GTTCATTTTTGTATTTCCCGCAGGCAAAGCTTCTGTTTCCCGACGTTCCG ATCGAGTGCGTCCTTTCGGTGGGGACGGGTTACTACCCACCCCAGCTAAG CAAGGCCGGGATGAGCTGGAACACCGTGGTCAACCAACTCGTCAACAGCG CGACCGTAAGTAGGTGGCGTACAAAACAGTCTCTCGCCTATTGGATATAA CCAACGCACAAAAGATTGCAAATACGCGTCGTGTCGAGGTGAAATACGGT CTTTTCTCCTGGGCGGCGTGTCTGGCAACGCTTATGTTAAAAAATGCACT GCTTCTAATTACCCTGCGGGGTCACTTATCGATACGCACGAGGTCGTGAG GTCGATACTCGAAACTGAGAGCGAGCAGCAAGAGCACAGTAGAGCACAGT AGAGCACAGTAGAGCACAGTAGAGCACAGTAGAGCACAGTAGAGCACAGT AGAGCACAGTAGAGCACAGTAGAGCACAGAGGGAGGGGGAGGGGGAGAGG GTTTATTGTGCACGAATGGATGGCCCGACTCATGAGTCATAGCCGAGGCA GCCGTTAAATCCCCTGAATAGGATATTTTCAAGCCAGCGTATTGCTGTCA CGATGCAGAAATAAGATCCGACTCTGATCAGAGGCCGAAGATCGTCGCCT TGGTTGCGAACCTACGTAAACGAATCGATATCATGAAAAATACTGTATCC AGGATACCGAGGGCGTCGACACCATGCTCAAGACGTTCCTTCCTCGCCAC CAATATTTCCGCTTCAACCCGAGCATCAAGCTGTTCAATATCGACGAAAT CAGGTATGCTCTTGTTTGGCGGCGCTGGTAAAAAAACTCCGTCGCCTACG CGGAGCGCCGCTTTCCGCCTTGTTCCACTCGATTGCTCCATAGCTCAAAA GGGCGCGGCTAAGAGCTCAAGCAAGGCGCAAGTCACCCGGTATAATAATA TTAATATTAGTATCAAGTTGTCCCCTTTCTTTTGCGGTGAAGATGCGAGA CAGTTGTGTGGAAGCTCTTTCCATCCACTCTTCCATCCCCCTCGAGTCGA ACCAGAGAGAGTTCGTTGCCAGCGCGCAACGGCCCAAAGTGATGCGAGTG TAATCACCTGACGCCCACCCCGGCTCCGTACTTGTACCCCTAGACCGGAA AGGTTGAACGAGCTAAAGGAGCTGGCGAAGGAATATGTGGCGCGCCCGGA GGTAAAGGCAAGAGCGGAAGAGCTTCGGCGATTGTTGCGGGGCGAGGCGA GCTCTGGACGGGCCCCCGCCGTCGGCGAGAGAGGTGGAGCTACAAGCAGA GATTCGTGGTTTACGCCAACCGGGCGATCTCCCGCAGCCGGGAGGAAGAA TGAAAGCCCGAGATAGAGGTGTGATAGAGGTGCGATCAACTTTATTCCCG GATGGGTTGACGGTCTGTTCGTATAATGGTTTCCGGCTGGGTTATTGGTT TGTTCATATCATGCTTTCCGTTGGGGTCGGTCTGTGTTTTTTTGGTAGAC ATGGTCGACAGATCGTTTTGCCAAGATGTACTGGTAGAACCGGAAAGGGT TTAGAGCTACAGGTGCAACAGTAGTGGAATGTGTATTGCGAAGTTTGTGA GTGGCGCGTTCATACAGATGCCTCCGGAAAATAAGGGTCGTAGGAGGCCA CTATTATACTATTAATACTGTATAGTTGTTTCCAAAGAATGGTGTCGTAT AGGGGGCTACTATTAATACTGGTAACTGTTTTGCGAGTCTAATCGTATAG TGGTCACGATGGTCACCAATGGGCGGTTAGGAACGCGTTCAGGTAACACC ATTTCGAACGCGTTCGCTCGCTCACGTGGCTGCTTGTTGTAGTTTGCTTG TGGCGGAGACTCCACACACACGAGAGAAATATTCGAAGCGTTGTCGAAGA AAGGACGCTGGAAACCTACCGGTCAGTCGCAGAAGCCGATACTATAGAGA GGCTTCCCTTTGCGAAAGCTACGTAGCCTCAAAAGTACTATTCGTAGACC TGTAAACAGTTCAACCGCGAACACGCGTGTGCGCTTGATTGCTTCAAGGA CTTGTGTGCCTGACGATTAGTTTATAGATTCCCATCCTACGTACTAGTAT CACAGTGTCCCAGTACGATTCCCCTAGTTTGTGTGTTCGGTGCCCGAAAA CACTGCCTCAAAGCAGGAGTCTGGTATCCAGATGGGGATCGTGACGACAT GCTGTGCGCTAGATCGATAGTTCGAGACTTCAGAGAGTTTGAAATTGCAA GTAGTGTAGGGAAATATATGGTGGGTGCCCCGCACGCGGGAAACGCAGTA CCAAAGGCGGTTTGTCACCGTCGAGAGAATCAGTATGTAACCATGCCACA CCTCTGTTGTGTTAGTAACGAACGCGTGTCTGTGGTGTTGCCTGATGGTT TGCGCGAGAGCAGACACGAGTGCTGGTGGTGGGCGTCTAGAGATGCGCCG CAGTGGACCTATTTCGGCCCCGGTGGTGACGTATAGGGATATTGGGGGAG CTGTTACAAACAGTACAGGCAGTCAAGACTTCCGGAGCGCTGGGTGGAAA AAAGGTTGCCGTCGACGTTTGTGCCACCCGCTTCCCTAGTACGGCGCGCT CTCGGAGCTGCGGATGGCTACCCCGTTCTGGCCAACCACCTCGAACTGTT TGTTCGCCAGGTTGTGCCATTGTTTCTCGCCCGAGGCATCGTACGCGCAA CGGTGCATCCGCCGCTTAGGATCGTACCCGATCACCTGCATTGTTCCGTG CACGCGCCGCCGTTGACGAAGGTGGCCTGTTAGGTCGAACCTGAAGAACA CGAAGTTTTGGCCCCACAGAGTAGTACTACAGTAGTATAGAGTATAGCCG GGAAAGGGCCACGGACGGGTCTACAAAAGGCGACACGATTTGGAATCCAA AACATGCCATTATGGGTTCGGTCTCGTCTGGGCGACGGGGAACGTAACGC CTCGAACGATTAAGAATTGGTGATGGGACGGACGGAGAACAGTCGCGGGG GTGGGGGTACTTTGATGGGATGTAAATTACGGGATACTCAAGCTGACAAG TTATGCTGTCTCGACATGGACGAAGACTTGGACCTC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig110:267468..278403-

>mRNA_F-serratus_M_contig110.939.1 ID=mRNA_F-serratus_M_contig110.939.1|Name=mRNA_F-serratus_M_contig110.939.1|organism=Fucus serratus male|type=CDS|length=9924bp|location=Sequence derived from alignment at F-serratus_M_contig110:267468..278403- (Fucus serratus male)
ATGTTATCTATTATGAGGTTAGTGTTGCCTTGGTCTCAAGGAGGATCTAC
GCAGCCATCGCTTGCGCCGCGTGCCGCCGACGGTAGTATCGAGATCGACG
TGCGGGAGACTTACGGCAATGGTGACGAAGAGGGCCTAGTCTTCGAGACG
ATTATGTCCATGGTAAAGCTTGGGTGGCCCTGGTCCGAACAAGACACGAA
TGACGCCCGATCGCCGCCCGTGTCGATTGACGTCGAGGGTAATCAAGGCA
TAGCTCCGCGGGAAGAAGCGGTCCAAGTTGGAGAAAAGCAGGACGGCGTT
GAGGAGTCAATATTCACCGCGATACTTTCTACCATTAATCTTGGGTGGGC
TTGGTTGCAGGGGAACTCCAACGACGAGGCGGTGTCGGAGGCGGACGGGT
GGGAGCCGCCGATAGGGTTGCCAGGACTGCGAGAAAAACGATCTTCTCGA
TCCGTTCCCCTTGCCCCAGAGAAAGCGAGCAATAGAGGGTGGTGGCTCTT
GGGTTGGGGACGAGGTGAGGAGGATCAAGCGGAGGGCAAGACCGGCCGCC
AACCCAAAGAAGTGCAGAAGTTATCGAGGAATACCACTGACCGGTTACGG
CCAACAACCAGTATCAGTGCGTCAGGAATACCCCAACTGCCACCCTCGCC
ATCATCGACTCCACCGTATCGTGACGGAGCTGTGACAGTAAACCGTTCAG
TCAGAGAAGCTTCTGCGACCCCGAGTCGTGGTCCTTACCCCCGGATCATA
GCGGCTGTCATTCGGCCGGCGTTGATCGTTCGGAACAAGTTCCGTAGAAA
TGTTGGTGTCCCGGCAACGGTCTATTCTTTTTCCGGCTTCGCGCCCTCAA
CGGTATTGTCGCTACCGCCGGGTGCCCGACTTCTGAGTGGTATCAGTACA
AACAACCCTTCATTCCCTGTTCGGGCGCCTTGGCGCCCCCCGGGATACCG
ATGGGGGGTGTCACTGTTGTCCAAGAAGTCCACTACGTCATCTGGAGAGC
AAGCTAAGGACAAAGCAAGGGGGGATGTTGATCAAGACTTGCGAGATTTC
TCAACTTATGTTGCGGTGAGGGAGCCGTCGTCGAACTTCGATTTAGAAAT
GGATAAAATAGTAACCATGGAAAACATCGAACCCGATGCTCGGGGTGTAG
CCATCAGCAGCAATCTTACGACGGCAAGAAGCCGTCTCATGACTCGTCTC
GGAATGAAAGGTGCACAGGGTTCCCAAGAAGATGAAGGTGAAGCGATCAA
GGAGACCGACTCAGTTTCCGACCCAAATCAAGGGGAAGGTTGGTCGGAGG
CCGAGGTGGAAGAAGGATTTGACCCTGGTACACGCGACAGAGATATGCCT
TGGTGGCAAGGAGGGGCCGCAGCTTTACTCGGTGTCGGCGCGGTGCTCTA
CCGGCCCATCGTAAATAGGTTGCCGTGGATCTTTGCCGACGCACCACCAG
CCGACGAGATTGCGCGCCCTGAACGTCAAAATCTCGTCGAGGCAATGGCC
AGCGAAAGCACGCTTCCGCGTTCCACTGCGGAAGCAGTCGCTGGTCCAAC
GATATTGCGAACGACTGGGGAGGAAACGATTGCCGAGTCTAGCCAAAATG
ATACACAGGTTCGATTGGAAGATGCTGAACGGAACGCGGACTCTAACTTA
AAGGCGGAGGAGGAGAAGGAGGCAACCGAACCGAACGCGTCTCCTTCTGA
TCGGACCAGGGGGGCTATTCTGAGAGGCTTGACAACCACTGCGTTGTACA
AGTTGAAGACGACATCCAGGAGAGCACGGCTTTGGGTGCTGTTGAGACGC
AGATCAAGGGCACGCGCGAAGCCGTTGTTACCAGGGGTGGACAGTGACAT
CAATACTCTATCTGTGCCGCTGGCATCCCTCGAGAAAATGTCGCCTTTGG
GGGGGAATCCTGCACTAAGTCTGCCGCAGGCGAGCGTGGTCCAGGATGCC
GATACGCTGCAAAACGAGGCGGCGCCCTTTGTAGAAAGTAATGATAAGGT
TCCTCAGGCGATGGATGGCGGTGGCGGCTGGAACTTTTTCGCCTTCTTTC
CCAAGGATAAAGATGAACAACCGAGCAACTCCACGGATACTGGTGCGGTA
CCTGCGACCGCCAGAAACAATGCCAAGAACAGTGCCCCGGCAACGACACA
AGTTTCGTCTCTCGAAGAAAAGGATCCTTTGGAGGAAAGTGTGGTTATTA
ATAGTACTAAAGGAAAGAAGCAGGCGACGGCATGGCCAGGATCGGCGTTT
GTCGAGGGACTAGACCCAAGGGCACAGATGTTATCTATTATGAGGTTAGT
GTTGCCTTGGTCTCAAGGAGGATCTACGCAGCCATCGCTTGCGCCGCGTG
CCGCCGACGGTAGTATCGAGATCGACGTGCGGGAGACTTACGGCAATGGT
GACGAAGAGGGCCTAGTCTTCGAGACGATTATGTCCATGGTAAAGCTTGG
GTGGCCCTGGTCCGAACAAGACACGAATGACGCCCGATCGCCGCCCGTGT
CGATTGACGTCGAGGGTAATCAAGGCATAGCTCCGCGGGAAGAAGCGGTC
CAAGTTGGAGAAAAGCAGGACGGCGTTGAGGAGTCAATATTCACCGCGAT
ACTTTCTACCATTAATCTTGGGTGGGCTTGGTTGCAGGGGAACTCCAACG
ACGAGGCGGTGTCGGAGGCGGACGGGTGGGAGCCGCCGATAGGGTTGCCA
GGACTGCGAGAAAAACGATCTTCTCGATCCGTTCCCCTTGCCCCAGAGAA
AGCGAGCAATAGAGGGTGGTGGCTCTTGGGTTGGGGACGAGGTGAGGAGG
ATCAAGCGGAGGGCAAGACCGGCCGCCAACCCAAAGAAGTGCAGAAGTTA
TCGAGGAATACCACTGACCGGTTACGGCCAACAACCAGTATCAGTGCGTC
AGGAATACCCCAACTGCCACCCTCGCCATCATCGACTCCACCGTATCGTG
ACGGAGCTGTGACAGTAAACCGTTCAGTCAGAGAAGCTTCTGCGACCCCG
AGTCGTGGTCCTTACCCCCGGATCATAGCGGCTGTCATTCGGCCGGCGTT
GATCGTTCGGAACAAGTTCCGTAGAAATGTTGGTGTCCCGGCAACGGTCT
ATTCTTTTTCCGGCTTCGCGCCCTCAACGGTATTGTCGCTACCGCCGGGT
GCCCGACTTCTGAGTGGTATCAGTACAAACAACCCTTCATTCCCTGTTCG
GGCGCCTTGGCGCCCCCCGGGATACCGATGGGGGGTGTCACTGTTGTCCA
AGAAGTCCACTACGTCATCTGGAGAGCAAGCTAAGGACAAAGCAAGGGGG
GATGTTGATCAAGACTTGCGAGATTTCTCAACTTATGTTGCGGTGAGGGA
GCCGTCGTCGAACTTCGATTTAGAAATGGATAAAATAGTAACCATGGAAA
ACATCGAACCCGATGCTCGGGGTGTAGCCATCAGCAGCAATCTTACGACG
GCAAGAAGCCGTCTCATGACTCGTCTCGGAATGAAAGGTGCACAGGGTTC
CCAAGAAGATGAAGGTGAAGCGATCAAGGAGACCGACTCAGTTTCCGACC
CAAATCAAGGGGAAGGTTGGTCGGAGGCCGAGGTGGAAGAAGGATTTGAC
CCTGGTACACGCGACAGAGATATGCCTTGGTGGCAAGGAGGGGCCGCAGC
TTTACTCGGTGTCGGCGCGGTGCTCTACCGGCCCATCGTAAATAGGTTGC
CGTGGATCTTTGCCGACGCACCACCAGCCGACGAGATTGCGCGCCCTGAA
CGTCAAAATCTCGTCGAGGCAATGGCCAGCGAAAGCACGCTTCCGCGTTC
CACTGCGGAAGCAGTCGCTGGTCCAACGATATTGCGAACGACTGGGGAGG
AAACGATTGCCGAGTCTAGCCAAAATGATACACAGGTTCGATTGGAAGAT
GCTGAACGGAACGCGGACTCTAACTTAAAGGCGGAGGAGGAGAAGGAGGC
AACCGAACCGAACGCGTCTCCTTCTGATCGGACCAGGGGGGCTATTCTGA
GAGGCTTGACAACCACTGCGTTGTACAAGTTGAAGACGACATCCAGGAGA
GCACGGCTTTGGGTGCTGTTGAGACGCAGATCAAGGGCACGCGCGAAGCC
GTTGTTACCAGGGGTGGACAGTGACATCAATACTCTATCTGTGCCGCTGG
CATCCCTCGAGAAAATGTCGCCTTTGGGGGGGAATCCTGCACTAAGTCTG
CCGCAGGCGAGCGTGGTCCAGGATGCCGATACGCTGCAAAACGAGGCGGC
GCCCTTTGTAGAAAGTAATGATAAGGTTCCTCAGGCGATGGATGGCGGTG
GCGGCTGGAACTTTTTCGCCTTCTTTCCCAAGGATAAAGATGAACAACCG
AGCAACTCCACGGATACTGGTGCGGTACCTGCGACCGCCAGAAACAATGC
CAAGAACAGTGCCCCGGCAACGACACAAGTTTCGTCTCTCGAAGAAAAGG
ATCCTTTGGAGGAAAGTGTGGTTATTAATAGTACTAAAGGAAAGAAGCAG
GCGACGGCATGGCCAGGATCGGCGTTTGTCGAGGGACTAGACCCAAGGGC
ACAGATCGAGTCTGCAATGGCGCAGTATCTCCGCTCCACGTTTGGATACG
GCACTGGAGAGCCAGCTACAGGGGTCACAGAAGAAACACTTGCCGCCGCC
GCTGCAGCTGCAGGAGATGCGGCCCTGCTGGAGGGGCAGAAACATCTGGA
AGCGAAAGCGAGTACCGGGCGTGCTCCCGCGCTCGACGGGGAGAAAGAAA
TGGAAGGGGAAAGTGCCAGCCCCACAGCTCGCTACTTGGACGATCTTTAT
CCGGCCAGCGACGAAGAAACCGTTGCCAGATGGTCGGGGTCCGAGGCGGC
GGCCGCTGCGGCAGGGGCAGCCGCGGGAGCTGTCATGGACGCCGCGGGAG
TAGCCGCCGGGGTCGCAGCCGACGTGGCGGCAGCTGCCACTGCCGCTACG
TATAATGTTGCGGCGCCGTTCGGGCAAGCGGAAGAGGAGGATGAGGGTTG
GCAAGTTACCGGGAGCATGAAGAAGGGCAAGACAGATGCTGGCGAGTTTG
GCAAAGGGAAGCTAACCGTGAAGCCCAGGAGTCTCGATCCGCAGAAAGCA
TCCGACATGATAATCGACCCCGTCTCGTCCAACAGCCTACGGATCGAGTC
TGCAATGGCGCAGTATCTCCGCTCCACGTTTGGATACGGCACTGGAGAGC
CAGCTACAGGGGTCACAGAAGAAACACTTGCCGCCGCCGCTGCAGCTGCA
GGAGATGCGGCCCTGCTGGAGGGGCAGAAACATCTGGAAGCGAAAGCGAG
TACCGGGCGTGCTCCCGCGCTCGACGGGGAGAAAGAAATGGAAGGGGAAA
GTGCCAGCCCCACAGCTCGCTACTTGGACGATCTTTATCCGGCCAGCGAC
GAAGAAACCGTTGCCAGATGGTCGGGGTCCGAGGCGGCGGCCGCTGCGGC
AGGGGCAGCCGCGGGAGCTGTCATGGACGCCGCGGGAGTAGCCGCCGGGG
TCGCAGCCGACGTGGCGGCAGCTGCCACTGCCGCTACGTATAATGTTGCG
GCGCCGTTCGGGCAAGCGGAAGAGGAGGATGAGGGTTGGCAAGTTACCGG
GAGCATGAAGAAGGGCAAGACAGATGCTGGCGAGTTTGGCAAAGGGAAGC
TAACCGTGAAGCCCAGGAGTCTCGATCCGCAGAAAGCATCCGACATGATA
ATCGACCCCGTCTCGTCCAACAGCCTACGGCGGAGCGTCGCTAGGGATGA
AGGGATACGGGGGAACCGATCTCCAGGCGCAAGGCTCTTGTCCACGGCCA
TGAGGCGCCCGCGCTTGCCGCGAAGGAGGAAATCTAAGGCTGCAGGGGCA
ACCCTTGACCGAGTGACGCCGTCGAGAGACGTAGAAATGCAGGAGAACAC
GCTGCGGCGACTTGGCAGGGTTGGTGTGACCGAGATAGCATCAAGCATGC
GGAGCGTCGCTAGGGATGAAGGGATACGGGGGAACCGATCTCCAGGCGCA
AGGCTCTTGTCCACGGCCATGAGGCGCCCGCGCTTGCCGCGAAGGAGGAA
ATCTAAGGCTGCAGGGGCAACCCTTGACCGAGTGACGCCGTCGAGAGACG
TAGAAATGCAGGAGAACACGCTGCGGCGACTTGGCAGGGTTGGTGTGACC
GAGATAGCATCAAGCATGCTCCTGATCGCTTCTGAGATGGCCTCGCAGGT
CGGTTCCGTGGAAGAGCTCGAGCTTTTCCGCGAAGAAGGCGGCATGCCTA
GGCTGCTCATGGCGCTCTCTCCCATCCCTTATACGACAAAGCTCCTGATC
GCTTCTGAGATGGCCTCGCAGGTCGGTTCCGTGGAAGAGCTCGAGCTTTT
CCGCGAAGAAGGCGGCATGCCTAGGCTGCTCATGGCGCTCTCTCCCATCC
CTTATACGACAAAGGCCGACGGTCTCGAGGCAATCCGTAACCTGTTACGC
GTCTCCCCGGAGTCGGTGGCTGCGGAGATACTGGAGACAGCCGGGAACGA
GGCTCTCTTTGAGCTCCGACGGCTAGTGGGAGCTCCTGGCGAGCCATGGT
CTTCGGCGGCGGCACAGGCGGCACAGGCGGCCAGTGACAGCTTCGACGCG
ATGAGACTGCAGGCCGACGGTCTCGAGGCAATCCGTAACCTGTTACGCGT
CTCCCCGGAGTCGGTGGCTGCGGAGATACTGGAGACAGCCGGGAACGAGG
CTCTCTTTGAGCTCCGACGGCTAGTGGGAGCTCCTGGCGAGCCATGGTCT
TCGGCGGCGGCACAGGCGGCACAGGCGGCCAGTGACAGCTTCGACGCGAT
GAGACTGCAGGCCGAGGCTGTGCAAGTTCTTCAGGAGCTGTCTCTCGCCA
GCGATGAAGCGCTGTCGAAGGTCAGGGAGCTTCCCAACCTCATCCCCGCC
CTCAGTTCAATCGTCTACCCGGGTTCAGGTCTTCTGGGCACCCTCAGAGA
CAATATCGGGCGATCGCTGGGGGGCATGAGTGGCTTTACGGGCAGTACGG
GGCGGGCAGACGCAGCGCGACGCAAGGAAGAGGCTGTTTCGGCGCAGGCT
GTGTCCGCAGCGGCTAAGGCCGAGGCTGTGCAAGTTCTTCAGGAGCTGTC
TCTCGCCAGCGATGAAGCGCTGTCGAAGGTCAGGGAGCTTCCCAACCTCA
TCCCCGCCCTCAGTTCAATCGTCTACCCGGGTTCAGGTCTTCTGGGCACC
CTCAGAGACAATATCGGGCGATCGCTGGGGGGCATGAGTGGCTTTACGGG
CAGTACGGGGCGGGCAGACGCAGCGCGACGCAAGGAAGAGGCTGTTTCGG
CGCAGGCTGTGTCCGCAGCGGCTAAGCTGCTGTCGATGCTGGGAGTTCAC
ACGTGGAGGCCAAGACAACCTGGACAGAAGGGACTGAGAATACTTTCTCT
GGACGGGGGCGGAACCCGGGGAGTATTGACCATCGCTATTCTTAGGGAAA
TTCTTCAAGGCTTTGACAAGGACGTGCACGAGCTGCTGTCGATGCTGGGA
GTTCACACGTGGAGGCCAAGACAACCTGGACAGAAGGGACTGAGAATACT
TTCTCTGGACGGGGGCGGAACCCGGGGAGTATTGACCATCGCTATTCTTA
GGGAAATTCTTCAAGGCTTTGACAAGGACGTGCACGAGGTTTTTGACGTC
ATTTGTGGGACCTCTACGGGGGGTATACTGGCGATGCTCTTCGCCGCGGA
GAAGCAATCGCTTGCCTCGGTAACCGCCATGTACGACTCCCTGGTAGTAA
AGATCTTCACGAAAGACCTCCTCGCCAACGCGAAGCTCGTCCTTTGGCAG
GTTTTTGACGTCATTTGTGGGACCTCTACGGGGGGTATACTGGCGATGCT
CTTCGCCGCGGAGAAGCAATCGCTTGCCTCGGTAACCGCCATGTACGACT
CCCTGGTAGTAAAGATCTTCACGAAAGACCTCCTCGCCAACGCGAAGCTC
GTCCTTTGGCAGGCCCAGTACTCCAGCGCAACCTGGGAAGCCGTTCTGGA
GGAAATACTGGGCGAGCGGCGAATGATCGACACCATAAGCAGCCCCGACA
ATCCAAAGGTCGTCATCTGCTCCACCATAATAAACGTCAATCCTTTGGAA
ATGATGTTGTGGAGAAACTACGGCTTCGGTCCAGACCAAGAGACCGTATA
CAAGGCCCAGTACTCCAGCGCAACCTGGGAAGCCGTTCTGGAGGAAATAC
TGGGCGAGCGGCGAATGATCGACACCATAAGCAGCCCCGACAATCCAAAG
GTCGTCATCTGCTCCACCATAATAAACGTCAATCCTTTGGAAATGATGTT
GTGGAGAAACTACGGCTTCGGTCCAGACCAAGAGACCGTATACAAGGGGG
ACTACAGACGGAGGATGCGCGAGTGTGTAAGGGCCACCACGGCGGCGCCG
TCGTTCTTCACCCCGCTGGTGGATGGAGACATGATGTACGCCGACGGCGC
ATTCATGGCAAATAACCCCACGTCCATCGCAATCACCGAGGGGGACTACA
GACGGAGGATGCGCGAGTGTGTAAGGGCCACCACGGCGGCGCCGTCGTTC
TTCACCCCGCTGGTGGATGGAGACATGATGTACGCCGACGGCGCATTCAT
GGCAAATAACCCCACGTCCATCGCAATCACCGAGGCAAAGCTTCTGTTTC
CCGACGTTCCGATCGAGTGCGTCCTTTCGGTGGGGACGGGTTACTACCCA
CCCCAGCTAAGCAAGGCCGGGATGAGCTGGAACACCGTGGTCAACCAACT
CGTCAACAGCGCGACCGCAAAGCTTCTGTTTCCCGACGTTCCGATCGAGT
GCGTCCTTTCGGTGGGGACGGGTTACTACCCACCCCAGCTAAGCAAGGCC
GGGATGAGCTGGAACACCGTGGTCAACCAACTCGTCAACAGCGCGACCGA
TACCGAGGGCGTCGACACCATGCTCAAGACGTTCCTTCCTCGCCACCAAT
ATTTCCGCTTCAACCCGAGCATCAAGCTGTTCAATATCGACGAAATCAGG
ATACCGAGGGCGTCGACACCATGCTCAAGACGTTCCTTCCTCGCCACCAA
TATTTCCGCTTCAACCCGAGCATCAAGCTGTTCAATATCGACGAAATCAG
ACCGGAAAGGTTGAACGAGCTAAAGGAGCTGGCGAAGGAATATGTGGCGC
GCCCGGAGGTAAAGGCAAGAGCGGAAGAGCTTCGACCGGAAAGGTTGAAC
GAGCTAAAGGAGCTGGCGAAGGAATATGTGGCGCGCCCGGAGGTAAAGGC
AAGAGCGGAAGAGCTTCGGCGAGCTCTGGACGGGCCCCCGCCGTCGGCGA
GAGAGGTGGAGCTACAAGCAGAGATTCGTGGTTTACGCCAACCGGGCGAT
CTCCCGCAGCCGGGAGGAAGAATGAAAGCCCGAGATAGAGGTGTGATAGA
GGTGCGATCAACTTTATTCCCGGATGGGTTGACGGTCTGTTCGTATAATG
GTTTCCGGCTGGGTTATTGGTTTGTTCATATCATGCTTTCCGTTGGGGTC
GGTCTGTGTTTTTTTGGTAGACATGGTCGACAGATCGTTTTGCCAAGATG
TACTGGTAGAACCGGAAAGGGTTTAGAGCTACAGGTGCAACAGTAGGCGA
GCTCTGGACGGGCCCCCGCCGTCGGCGAGAGAGGTGGAGCTACAAGCAGA
GATTCGTGGTTTACGCCAACCGGGCGATCTCCCGCAGCCGGGAGGAAGAA
TGAAAGCCCGAGATAGAGGTGTGATAGAGGTGCGATCAACTTTATTCCCG
GATGGGTTGACGGTCTGTTCGTATAATGGTTTCCGGCTGGGTTATTGGTT
TGTTCATATCATGCTTTCCGTTGGGGTCGGTCTGTGTTTTTTTGGTAGAC
ATGGTCGACAGATCGTTTTGCCAAGATGTACTGGTAGAACCGGAAAGGGT
TTAGAGCTACAGGTGCAACAGTAG
back to top