mRNA_F-serratus_M_contig1095.871.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 343 bits (881), Expect = 8.550e-109 Identity = 171/233 (73.39%), Postives = 191/233 (81.97%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGLLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDG 699 +V+RLADDLLEG GF A SKSL Y A YF RSYVSL NR VS+ KG+ +VD+G IPKF IGDP GF+SS PSAHYL DIWHK FYE PV+Q DG WTRE+YLQRRAQLVDG LAGDASFKYAKVIRL G+DGTRARPV+GIFTIMNEYDQVVFSKAM TASVHDLKNDLKM FV RFLGHGF+LPVI ++DECC+DR+LLL MF+E+ ETG RLYD A++ G Sbjct: 143 VVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMW-PNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAG 374
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE) HSP 1 Score: 225 bits (573), Expect = 3.090e-69 Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 1 Query: 205 DPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTRED------YLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFT 600 DPLG N HPSAHYL DIWHKWFYE+P++ + W D YLQRRAQLVDGRLLAGDASFKYAKVIRLPTG DGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLK+DLKM FV RF+GHGF+LPVILFT Sbjct: 3 DPLGLNRRHPSAHYLGDIWHKWFYEMPMV----KTWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILFT 136
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE) HSP 1 Score: 233 bits (595), Expect = 3.070e-68 Identity = 125/217 (57.60%), Postives = 150/217 (69.12%), Query Frame = 1 Query: 55 SKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGLLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVD 705 SKSL +AY++ YF RSYVSL + +S+ +GL GQ + +PKF GDP G+NSS PSAH+L DIW+KWFYE PV+Q LV +L KYAKVIRL TG DGTRA PVYGIFTIMNEYDQVVFSKAM TASV+DLKND KM FV +GHGF LPVI ++D CCEDR+LLL MF+E+ +E VRLYDAA + ++ Sbjct: 297 SKSLAQAYNSRYFSQMRSYVSLAKKGISKYRGLYGQQSNP-DVPKFAGTGDPSGYNSSSPSAHHLADIWNKWFYETPVVQ-----------------LV---MLPS----KYAKVIRLATGEDGTRALPVYGIFTIMNEYDQVVFSKAMSTASVYDLKNDPKMLFVKCVVGHGFTLPVIFYSDGCCEDRQLLLWMFKEIESENHVRLYDAAAEGAIE 488
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.490e-60 Identity = 104/241 (43.15%), Postives = 157/241 (65.15%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL 720 +V+RLADDL+ GKGF A +K++ +A++ + Y SLVN R + G+ + ++ + P +FG D + + PS HYLRD+W +F ++PVL+ DG WT E+Y R Q DG +L GDASFK+AK+IRL + R+RPVYG+FT+ NEY+QVV+ + MKT ++ +L +LK+ F+ RF+ +GF++P + TD+CC+DR+LL +F+E T + LY +D VD GV L Sbjct: 1 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVNSRRTS-SGIF-RSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKLFFM-RFVRNGFKVPTLWNTDDCCDDRQLLQRVFREFEEATWISLYL---EDEVDAGVQL 235
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.990e-54 Identity = 100/239 (41.84%), Postives = 150/239 (62.76%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGV 714 +V RLADDL+ GKGF A +K++ +A++ + Y SLVN R + G+ + ++ + P +FG D + + PS HYLRD+ +F ++PVL+ D WT E+Y R Q DG +L GDASFK+AK+IRL + R RPVYG FT+ NE +QVV+ + MKT ++ +L +LK+ F+ RF+ + F++P + T +CC+DR+LL + +E ETG+RLY +D VD GV Sbjct: 68 MVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTS-SGIF-RSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRLMKTGALSELAEELKLLFM-RFVRNDFKVPTLWNTHDCCDDRQLLQRILREFEEETGIRLYR---EDEVDAGV 300
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE) HSP 1 Score: 173 bits (438), Expect = 3.730e-48 Identity = 96/241 (39.83%), Postives = 139/241 (57.68%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL 720 +VNRLADDL+ GK F A +K++++A++ + Y SLVN R + G+ + ++ P +FG D + + PS HYLRD+W +F ++PVL+ D WT E+Y R Q DG +L GDASFK+AK+IRL + R RPVYG FT+ NEY+Q+ F RF+ +GF++P + TD+CC+DR+LL +F+E TG+ LY +D VD GV L Sbjct: 174 MVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTS-SGIF-RSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNEYEQLFFM---------------------RFVRNGFKVPTLWNTDDCCDDRQLLQRIFREFEEVTGISLYL---EDEVDAGVQL 388
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE) HSP 1 Score: 176 bits (446), Expect = 4.960e-48 Identity = 83/117 (70.94%), Postives = 99/117 (84.62%), Query Frame = 1 Query: 355 GRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVD 705 G + GDASFKYAKVIRL TG DGTRARPVY IFTIMNEY+QV+FSK M TASV+DLKNDLKM FV RF+GHGF+LPVI ++D+CCEDR+LLL MF+E+ +E VRLYDAA + ++ Sbjct: 10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQVIFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIFYSDDCCEDRQLLLSMFKEIESEDHVRLYDAAAEGAIE 126
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE) HSP 1 Score: 177 bits (449), Expect = 3.070e-47 Identity = 102/266 (38.35%), Postives = 152/266 (57.14%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKA-------------------------YSATYFKLHR-SYVSLVNRRVSQLKGLLGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKNDLKMTFVNRFLGHGFELPVILFTDECCEDRKLLLVMFQEVLAETGVRLYDAADDDGVDGGVVL 720 +V+RLADDL+ GKGF A +K++ + T F + + Y SLVN R + G+ +FG D + + PS HYLRD+W ++ ++PVL+ DG WT E+Y R Q DG +L+GDASFK+AK+IRL + R++PVYG+FT+ NEY+QVV+ + MKT ++ +L +LK F NRF+ +GF++ + TD+CC+DR+LL +F+E TG+ L+ +D VD GV L Sbjct: 208 MVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTS-SGIFRSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELK-PFFNRFVRNGFKVFTLWNTDDCCDDRQLLQRVFREFEEATGISLHL---EDEVDAGVQL 468
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.600e-42 Identity = 77/98 (78.57%), Postives = 84/98 (85.71%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGL--LGQDVDVGQIPKFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPV 288 L++RLADDLLEGKGF ATSKSLQ AY+ATYFKL+RSYVSL NRRVSQLKGL LG D DVG+IPKF + D LGFNS HPSAHYL DIWHKWF E+PV Sbjct: 169 LIDRLADDLLEGKGFAATSKSLQNAYTATYFKLYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSAHYLGDIWHKWFDEMPV 266
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE) HSP 1 Score: 151 bits (382), Expect = 7.040e-42 Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 1 LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGLLGQDVDVGQIP-KFGHIGDPLGFNSSHPSAHYLRDIWHKWFYEIPVLQDDGRVWTREDYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGSDGTRARPVYGIFTIMNEYDQV 483 LV+RLADDL+ GKGF A +K +++A++ + YVSL + R S L G +P KFG D + + PS HYLRD+W +F E+PVL+ G WTREDYL Q DG +LAGDASFK+AK+IRL + G R RPV+GIFT+ NEY+QV Sbjct: 76 LVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSLFG----AAPVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQV 233 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1095.871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1095.871.1 >prot_F-serratus_M_contig1095.871.1 ID=prot_F-serratus_M_contig1095.871.1|Name=mRNA_F-serratus_M_contig1095.871.1|organism=Fucus serratus male|type=polypeptide|length=240bp LVNRLADDLLEGKGFLATSKSLQKAYSATYFKLHRSYVSLVNRRVSQLKGback to top mRNA from alignment at F-serratus_M_contig1095:22988..24193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1095.871.1 ID=mRNA_F-serratus_M_contig1095.871.1|Name=mRNA_F-serratus_M_contig1095.871.1|organism=Fucus serratus male|type=mRNA|length=1206bp|location=Sequence derived from alignment at F-serratus_M_contig1095:22988..24193- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1095:22988..24193- >mRNA_F-serratus_M_contig1095.871.1 ID=mRNA_F-serratus_M_contig1095.871.1|Name=mRNA_F-serratus_M_contig1095.871.1|organism=Fucus serratus male|type=CDS|length=1440bp|location=Sequence derived from alignment at F-serratus_M_contig1095:22988..24193- (Fucus serratus male)back to top |