mRNA_F-serratus_M_contig1093.855.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1093.855.1
Unique NamemRNA_F-serratus_M_contig1093.855.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A6H5L4N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N3_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 6.110e-142
Identity = 304/614 (49.51%), Postives = 363/614 (59.12%), Query Frame = 1
Query:  412 KVYCVCRKADVTGTMLSCDFCEDWFHVRCVGLKEQDCDRFSVYACPPCTE-KGKKSTLHKKKKPAAAEGVNGGGGDASGVGKGGSVGAKIPPPKCPAASTPQRSKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGSRSGNTVGSGDGKSXXXXXXXXXXSTRPAEASSKPTXXXXXXXXXXXXXXTGAKSXXXXXPRKXXXXXXXXXXXXXXXXXXXSRPSGGRSDGGGEMKKPSGRVPLAERAVLVRTKRNWLHTSTSTPSSAF-YVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDRAGATCRVLRVEYELPAKSD-SFDPPVVAAVVTLVATNVASGKPKGSGAEHEVSVRPSSVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLREGRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDTVNMWAMSWAKHFLPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAIRGTL 2244
            +VYCVCR ADVTGTML CDFC+DWFHVRCVGL EQDCDRFS YACP CT+ KGKKSTL KKK+                         K+ P   PAA+    S P                                AGS      G      XXXXXXXXXX   PA+      XXXXXXXXXX     G        P  X                          DG G M+     VPLA+++VL+RT+R+WL  STS PSSA  YVPQEGDEVFYFPAG+  F   HPDPR HLR T   FRK DR G  CRV RV++ELPA+ D SFDPPVVAAVVTL+    ASG     G EHEVS+RPS   A+FLVPRRKV+Q + EG+R GD V+V+   G   EGR+ A++D +                    G ++PP  RP W GV+V WE GG+ TV+ W +SW KH LP VK+RR +    ED A AW ++A  +RGLL+ EQCTAA  S+ER +++Q D+F  F+DPVTD+IAPNYS EIALP+HL LIQ+RL+RKYYR+AE + ADLRLLE NC+TYN AGS IV+QCR A+ M E A+R +L
Sbjct:  395 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSKKKR-------------------------KVTPINNPAAAVHPSSLPA-------------------------------AGS------GXXXXXXXXXXXXXXXXXXXPAQXXXXXXXXXXXXXXXXRSALAGXXXAPQSAPXXX--------------------------DGRGTMEAMPP-VPLADKSVLLRTRRDWL--STSAPSSAGPYVPQEGDEVFYFPAGYAAFSEKHPDPREHLRNTSHAFRKVDRGGVACRVARVDFELPARGDDSFDPPVVAAVVTLM---TASGS---MGGEHEVSMRPSDR-ADFLVPRRKVMQALNEGYRPGDTVSVRHSEGHSSEGRILAIDDGSNDXXXXXX-----------PGFSRPP-PRPWWEGVTVRWEAGGTGTVSAWELSWPKHVLPLVKQRRLDAGLHEDPAAAWARQAGAERGLLSSEQCTAALASLERVLRQQRDVFVAFMDPVTDEIAPNYSMEIALPIHLGLIQQRLQRKYYRRAEGVFADLRLLETNCRTYNPAGSLIVDQCRAAMNMAEGALRNSL 898          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 3.020e-125
Identity = 332/614 (54.07%), Postives = 390/614 (63.52%), Query Frame = 1
Query:  412 KVYCVCRKADVTGTMLSCDFCEDWFHVRCVGLKEQDCDRFSVYACPPCTE-KGKKSTLHKKKKPAAAEGVNGGGGDASGVGKGGSVGAKIPPPKCPAASTPQRSKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGSRSGNTVGSGDGKSXXXXXXXXXXSTRPAEASSKPTXXXXXXXXXXXXXXTGAKSXXXXXPRKXXXXXXXXXXXXXXXXXXXSRPSGGRSDGGGEMKKPSGRVPLAERAVLVRTKRNWLHTSTSTPSSAF-YVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDRAGATCRVLRVEYELPAKSD-SFDPPVVAAVVTLVATNVASGKPKGSGAEHEVSVRPSSVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLREGRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDTVNMWAMSWAKHFLPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAIRGTL 2244
            +VYCVCR ADVTGTML CDFC+DWFHVRCVGL EQDCDRFS YACP CT+ KGKKSTL                                             SK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXX   PA+ +    XXXXXXXXXXXXXX     XXXXX   XXXXXX                         E   P   VPLA+++VL+RT+R+WL  S S P+SA  YVPQEGDEVF+FPAG+  F   HPDPR HLR T   FRK DR G  CRV RV++ELPA+ D SFDPPVVAAVVTL+    ASG     G EHEVS+RPS   A+FLVPRRKV+Q + EG+R GD V+V+   GQ  EGR+  ++D              G N G G G ++P + RP W GV+V WE GG+ TV+ W +SW KH LP VK+RR +    ED A AW ++A  +RGLL+ EQCTAA  S+ER +++Q D+F  F+DPVTD+IAPNYS EIALP+HL LIQ+RL+RKYYR+AE + ADLRLLE NC+TYN AGS IV+QCR A+ M E A+R +L
Sbjct: 3384 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTL---------------------------------------------SKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXLPAQKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTI---------------------EAMPP---VPLADKSVLLRTRRDWL--SNSAPNSAGPYVPQEGDEVFFFPAGYAAFSEKHPDPREHLRSTSHAFRKVDRGGVACRVARVDFELPARGDDSFDPPVVAAVVTLMP---ASGS---MGGEHEVSMRPSDR-ADFLVPRRKVMQALNEGYRPGDTVSVRYSEGQSYEGRILVIDD--------------GSNSGGGPGFSRP-QPRPWWEGVTVRWEAGGTGTVSAWELSWPKHVLPLVKQRRLDSGLHEDPAAAWARQAGAERGLLSSEQCTAALASLERVLRQQRDVFVAFMDPVTDEIAPNYSMEIALPIHLGLIQQRLQRKYYRRAEGVFADLRLLETNCRTYNPAGSLIVDQCRAAMNMAEGALRNSL 3888          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A835ZBA1_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA1_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.940e-23
Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 1744 PLWHGVSVEWETGGSDTVNMWAMSWAKHFLPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAIR 2235
            P W G  + W+ G   +VN+W +       P  + R +  + +  S           +  L+ +   A A ++ R  +++PDL  LF D VTDD+AP YS E+ LPMHL+LI  RL  +YYR A+A+ ADL L+  NC+ +N A + I  Q R  VGM   A++
Sbjct:   26 PTWEGADIAWDGGEVSSVNLWELE-----RPDARPRAKNAKRKSSS-----------KNELSSQAQAAMATALTRLQEQEPDLAALFDDEVTDDVAPGYSTEVPLPMHLQLIIGRLEHQYYRHADAVAADLALIASNCELFNRADAPISAQARSFVGMAVAAVQ 173          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A6G0XRZ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRZ7_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.950e-10
Identity = 98/384 (25.52%), Postives = 146/384 (38.02%), Query Frame = 1
Query: 1174 RNWLHTSTSTPSSAFYVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDRAGATCRVLRVEYELPA--------------------------KSDSFDPPVVAAVVTLVATN---VASGKPKGSGAEHEVSVRPSSVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLREGRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDTVNMWAM-SWAKHFLPSVKKRRREGEGEEDSAVAWIKKAD-LDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAI 2232
            R +     S+P+ +  VPQ GD + Y P GH  F R +P P     K +P       A   C V+ ++Y+ P                           + +SF    +   V+ +  N   V    P  S        +PS  CAEFL+  +K L G    +  G+ V  Q P   + +  +  ++D+ M +   V   P              P     W  + VE E      V+ W + S   +FLP                   +  AD + +GL +  Q + A                 F +PV     P+Y   IA PM L LI  R+   YYRQ +A+LAD++L+ RNC+TYN   S I    R  +  I T +
Sbjct: 1184 RTYCQQWASSPNISM-VPQVGDILMYCPQGHAVFSRSYPVPFLPAFKRLP----QPFAVLQCHVVDIQYKFPPVQNYPQQNRIIMHLTLDLIGLPRVYFQEESFG---LLDFVSFIPVNDEFVPDESPTRSKWRFHAQYQPSE-CAEFLLLEQKFLSGFQVHWAVGEPV--QMPYHTMDDHGM--IQDTQMDQGKIVEISPL------------DPNVVSPWECIVVEVENEAPCRVSPWELESDQSNFLPPT-----------------MPDADAILQGLQSIRQLSVAEG---------------FNEPVPTS-TPDYHITIANPMDLSLICRRVESGYYRQVDALLADVKLMVRNCETYNVESSLIAQNARSVLHNITTLL 1509          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A067C1G3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C1G3_SAPPC)

HSP 1 Score: 75.1 bits (183), Expect = 5.120e-10
Identity = 99/391 (25.32%), Postives = 140/391 (35.81%), Query Frame = 1
Query: 1183 LHTSTSTPSSAFYVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDR--AGATCRVLRVEYELPA--------------------------KSDSFDP-PVVAAVVTLVATN---VASGKPKGSGAEHEVSVRPSSVCAEFLVPRRKVLQGMGEGFRAGDKV-----TVQEPGGQLREGRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDTVNMWAMSWAKHF-----------LPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAV 2211
            L+    TP    YVPQ GD V Y P GH  +LR HP       KT P + K  R  A   C+++ + Y  P                           + D  D  P   A    V  N        P        V ++PS  C +F+V   K   G G  +   D V     T  + G Q+     A +   T+   D                   P    P W  ++V ++  G+  V+ W +  A              +PS++  RR G               L R L +  Q + A +               FV PV +   P+Y   +A PM L LI+ R+   YYRQ +A+LAD++L+  NC+ YN   S I    R  V
Sbjct: 1271 LYCQQVTPQPQTYVPQVGDLVVYCPQGHEFYLRFHPS------KTQPAYMKFPRKVAAVQCQIVHIAYTFPLVETYKPNQRVLMQLHLEVVALPAVYFEDDGTDADPCRRAFNVFVPVNDNFELDDAPSRERRRFRVHMQPSH-CPDFIVLFAKYALGFGAPWNVQDAVQTVLPTTDDHGIQID----AVLNMGTVLASDRA----------------DPDVDSP-WECLTVLFDDDGTVRVSPWELEPASAEARLAQLALAPPVPSIEGERRAG---------------LLRALASIMQLSVALD---------------FVPPVPES-TPDYYVTVANPMDLSLIRSRVELGYYRQVDALLADVQLILDNCEKYNVETSPIAQNARALV 1602          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A485KTR4_9STRA (Aste57867_11528 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.980e-9
Identity = 101/405 (24.94%), Postives = 156/405 (38.52%), Query Frame = 1
Query: 1138 PLAERAVLVRT----KRNWLHTSTSTPSSAFYVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDR--AGATCRVLRVEYELPAKSDSFDPPVVAAVVTLVATNVASGKPKGSGAEHEVSV--------------------RPS---------SVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLRE-GRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDT-VNMWAMSWA---KHFLPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAI 2232
            PL+  + + R      R +   S ++P  +  VPQ GD V Y P GH  FLR  P       K VP +++  +  A A C+++ ++Y  P        P    +V  +  +V  G P    A+HE+ +                    RP          S CAEFL+  +K L G    +  G+  TV  P   L + G V   +  T +  D                +   P     W  + V+W+   +   V+ W +         LP +           DS           +GL +  Q + AA                F +PV     P+Y   IA PM L+LI +R+   YYRQ +A+ AD++L+ +NC+TYN   S I    R  +  + T +
Sbjct: 1192 PLSTESFIRRMGHQYDRTYCQQSATSPLVSI-VPQVGDTVVYCPQGHAVFLRQFPT------KFVPPYKRMPKPVAVAQCQIVDIQYNFPPVEKY---PQQRRIVMQLTMDVV-GLPHVYFADHELGLFDFATFVPVDDQFAQNDDAARPKWRFHIHFQPSECAEFLLLDQKFLSGFQLHWAVGE--TVHMPYHTLDDHGIVVDSQVDTGRIVDI---------------SRLDPAVASPWECIVVKWDNEEAPCRVSPWELEAGDPTNFVLPVIP----------DSPSVL-------QGLQSIRQLSVAAG---------------FNEPVPST-TPDYHITIANPMDLELICQRVESSYYRQVDALFADVKLMVKNCETYNVESSLIAQNARSVLTNVLTLL 1535          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A177UBE9_9BASI (Transcription factor BYE1 n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UBE9_9BASI)

HSP 1 Score: 72.8 bits (177), Expect = 2.400e-9
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query:  415 VYCVCRKADVTGTMLSCDFCEDWFHVRCVGLKEQDCDRFSVYACPPCTEK 564
            +YCVC+K D    M+ C  CEDWFH+RCVGL ++  DR   Y CPPC+EK
Sbjct:  212 LYCVCKKKDDGSPMVECALCEDWFHLRCVGLSKRAVDRLESYTCPPCSEK 261          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A6A6CZS8_9PEZI (PHD-type domain-containing protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CZS8_9PEZI)

HSP 1 Score: 69.7 bits (169), Expect = 3.400e-9
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1
Query:  418 YCVCRKADVTGTMLSCDF-CEDWFHVRCVGLKEQDCDRFSVYACPPCTEKGKKSTLHK 588
            +C+CR  D  GTM+ CD  C+DWFH+RCVG+K+++ D    Y CPPCTE G   T+ K
Sbjct:   41 FCICRGLD-EGTMIGCDGGCDDWFHLRCVGIKKKEQDLIEKYVCPPCTELGNGETIWK 97          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: A0A6A5A6S8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6S8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.550e-9
Identity = 94/361 (26.04%), Postives = 134/361 (37.12%), Query Frame = 1
Query: 1222 VPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDRAGAT--CRVLRVEYELPAKSDSFDPPVVAAVVTLVATNV----------------ASGKPKG-SGAEHEVSVRPS---------SVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLRE-GRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDT-VNMWAM-SWAKHFLPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAV 2211
            +PQ GD + Y P GH  FLR  P       K    FR+  R  A   C V+ ++++ P          +   + L  T +                 S  P   S  + E   RP          S CAEFL+  +K L G  +  R     TVQ     + E G + A +  T +  D                +   P     W  + V+WE   +   V+ W + S   HF P     R                  L +GL++  Q + AA                F +PV     P+Y   IA PM L LI +R+   YYR  +A+LAD++L+ RNC+TYN   S I    R  +
Sbjct:  430 IPQVGDTLVYCPQGHAVFLRSFPS------KFQAAFRRLPRPFAVLQCHVVDIQFDFPRVELYPQQNRIVMQLVLEVTGLPDVYFQDEQHCDVLAFGSFVPVNRSFVQDEAETRPKWRFHLQHQPSECAEFLLLEQKYLSGF-QLPRWAVGATVQMAYHTMDEHGMIQATQMDTGRILDL---------------SPLDPAVMSPWECIVVQWENEDTPCRVSPWELESDQTHFAPPTIPERPA----------------LLQGLMSIRQLSVAAG---------------FNEPVPTS-TPDYHITIANPMDLSLICQRVESSYYRHVDALLADVKLMVRNCETYNVESSLIAQNARSVL 736          
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Match: T0S0U0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S0U0_SAPDV)

HSP 1 Score: 71.2 bits (173), Expect = 7.710e-9
Identity = 95/394 (24.11%), Postives = 140/394 (35.53%), Query Frame = 1
Query: 1183 LHTSTSTPSSAFYVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDR--AGATCRVLRVEYELPA----------------------------KSDSFDPPVVA--AVVTLVATNVASGKPKGSGAEHEVSVRPSSVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLREGRVAAVEDSTMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDTVNMWAMSWAKHF-----------LPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAAAESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRKYYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAIR 2235
            L+     P    YVPQ GD V Y P GH  +LR HP       KT P +    R  A   C+++ + Y  P                               D  DP   A  A V +         P        V ++PS  C +F+V   K   G G  +   D V    P          + +D  ++    +  G    N  +    + P      W  ++V ++ G +  V+ W +  A              LP++   RR G               L R L +  Q + A +               FV PV +   P+Y   +A PM L LI+ R+   YYRQ +A+LAD+ L+  NC+ YN   S I    R  V  I + ++
Sbjct: 1245 LYCQQILPQPQSYVPQVGDVVVYCPQGHEFYLRFHPS------KTQPAYMTFPRKFAAVQCQIVHIAYTFPLVETYKPHQRVLMQLHLEVVGLPALYFEDDQDESDPCRRAFNAFVPVNDQFEPDDAPSRVRRRFRVHMQPSD-CPDFVVLYAKYALGFGAPWTVQDTVQTVLP----------STDDHGIQIDSVLNTGTVLANDRVESDVDSP------WECLTVLFDDGDTVRVSPWELEPASAEARLAQLALAPPLPTIDGERRAG---------------LLRALASIMQLSVALD---------------FVPPVPES-TPDYYVTVANPMDLSLIRSRVEHGYYRQVDALLADVHLILDNCEKYNVETSPIAQNARSLVAAIVSILQ 1584          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1093.855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N3_9PHAE6.110e-14249.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH6_ECTSI3.020e-12554.07WD repeat domain-containing protein, putative n=1 ... [more]
A0A835ZBA1_9STRA2.940e-2335.98Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6G0XRZ7_9STRA2.950e-1025.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A067C1G3_SAPPC5.120e-1025.32Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A485KTR4_9STRA1.980e-924.94Aste57867_11528 protein n=1 Tax=Aphanomyces stella... [more]
A0A177UBE9_9BASI2.400e-956.00Transcription factor BYE1 n=2 Tax=Tilletia TaxID=1... [more]
A0A6A6CZS8_9PEZI3.400e-951.72PHD-type domain-containing protein n=1 Tax=Zasmidi... [more]
A0A6A5A6S8_9STRA6.550e-926.04Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
T0S0U0_SAPDV7.710e-924.11Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1093contigF-serratus_M_contig1093:32555..42821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score430.3
Seed ortholog evalue2e-117
Seed eggNOG ortholog2880.D7FZH6
Preferred nameCTF1
KEGG koko:K11446,ko:K11797,ko:K11798
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0001934,GO:0003674,GO:0005102,GO:0005125,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006357,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007346,GO:0008104,GO:0008150,GO:0008284,GO:0008286,GO:0008360,GO:0009719,GO:0009725,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010799,GO:0010800,GO:0010941,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030545,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032868,GO:0032869,GO:0032870,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033365,GO:0034097,GO:0034504,GO:0034613,GO:0038111,GO:0040008,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042393,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043567,GO:0043568,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045840,GO:0045893,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0046907,GO:0048018,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0060255,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070577,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0090068,GO:0098760,GO:0098761,GO:0098772,GO:0140030,GO:0140033,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.regulation of cell shape
EggNOG OGsCOG0553@1,COG2319@1,KOG0383@2759,KOG0644@2759,KOG1633@1,KOG1633@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03036,ko04121
Exons12
Model size2415
Cds size2412
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1093.855.1prot_F-serratus_M_contig1093.855.1Fucus serratus malepolypeptideF-serratus_M_contig1093 32557..42821 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928949.210521-CDS-F-serratus_M_contig1093:32556..327881622928949.210521-CDS-F-serratus_M_contig1093:32556..32788Fucus serratus maleCDSF-serratus_M_contig1093 32557..32788 -
1690962641.751976-CDS-F-serratus_M_contig1093:32556..327881690962641.751976-CDS-F-serratus_M_contig1093:32556..32788Fucus serratus maleCDSF-serratus_M_contig1093 32557..32788 -
1622928949.2248642-CDS-F-serratus_M_contig1093:33293..334271622928949.2248642-CDS-F-serratus_M_contig1093:33293..33427Fucus serratus maleCDSF-serratus_M_contig1093 33294..33427 -
1690962641.7708719-CDS-F-serratus_M_contig1093:33293..334271690962641.7708719-CDS-F-serratus_M_contig1093:33293..33427Fucus serratus maleCDSF-serratus_M_contig1093 33294..33427 -
1622928949.2408276-CDS-F-serratus_M_contig1093:35054..351621622928949.2408276-CDS-F-serratus_M_contig1093:35054..35162Fucus serratus maleCDSF-serratus_M_contig1093 35055..35162 -
1690962641.7862139-CDS-F-serratus_M_contig1093:35054..351621690962641.7862139-CDS-F-serratus_M_contig1093:35054..35162Fucus serratus maleCDSF-serratus_M_contig1093 35055..35162 -
1622928949.253891-CDS-F-serratus_M_contig1093:35382..355321622928949.253891-CDS-F-serratus_M_contig1093:35382..35532Fucus serratus maleCDSF-serratus_M_contig1093 35383..35532 -
1690962641.797224-CDS-F-serratus_M_contig1093:35382..355321690962641.797224-CDS-F-serratus_M_contig1093:35382..35532Fucus serratus maleCDSF-serratus_M_contig1093 35383..35532 -
1622928949.2669146-CDS-F-serratus_M_contig1093:36156..363871622928949.2669146-CDS-F-serratus_M_contig1093:36156..36387Fucus serratus maleCDSF-serratus_M_contig1093 36157..36387 -
1690962641.8058474-CDS-F-serratus_M_contig1093:36156..363871690962641.8058474-CDS-F-serratus_M_contig1093:36156..36387Fucus serratus maleCDSF-serratus_M_contig1093 36157..36387 -
1622928949.2830186-CDS-F-serratus_M_contig1093:36839..370611622928949.2830186-CDS-F-serratus_M_contig1093:36839..37061Fucus serratus maleCDSF-serratus_M_contig1093 36840..37061 -
1690962641.813991-CDS-F-serratus_M_contig1093:36839..370611690962641.813991-CDS-F-serratus_M_contig1093:36839..37061Fucus serratus maleCDSF-serratus_M_contig1093 36840..37061 -
1622928949.2958214-CDS-F-serratus_M_contig1093:37908..380101622928949.2958214-CDS-F-serratus_M_contig1093:37908..38010Fucus serratus maleCDSF-serratus_M_contig1093 37909..38010 -
1690962641.8237064-CDS-F-serratus_M_contig1093:37908..380101690962641.8237064-CDS-F-serratus_M_contig1093:37908..38010Fucus serratus maleCDSF-serratus_M_contig1093 37909..38010 -
1622928949.3102784-CDS-F-serratus_M_contig1093:38917..390031622928949.3102784-CDS-F-serratus_M_contig1093:38917..39003Fucus serratus maleCDSF-serratus_M_contig1093 38918..39003 -
1690962641.8329408-CDS-F-serratus_M_contig1093:38917..390031690962641.8329408-CDS-F-serratus_M_contig1093:38917..39003Fucus serratus maleCDSF-serratus_M_contig1093 38918..39003 -
1622928949.3263555-CDS-F-serratus_M_contig1093:40234..408921622928949.3263555-CDS-F-serratus_M_contig1093:40234..40892Fucus serratus maleCDSF-serratus_M_contig1093 40235..40892 -
1690962641.842273-CDS-F-serratus_M_contig1093:40234..408921690962641.842273-CDS-F-serratus_M_contig1093:40234..40892Fucus serratus maleCDSF-serratus_M_contig1093 40235..40892 -
1622928949.3379588-CDS-F-serratus_M_contig1093:41505..417931622928949.3379588-CDS-F-serratus_M_contig1093:41505..41793Fucus serratus maleCDSF-serratus_M_contig1093 41506..41793 -
1690962641.8519166-CDS-F-serratus_M_contig1093:41505..417931690962641.8519166-CDS-F-serratus_M_contig1093:41505..41793Fucus serratus maleCDSF-serratus_M_contig1093 41506..41793 -
1622928949.3486733-CDS-F-serratus_M_contig1093:42228..423371622928949.3486733-CDS-F-serratus_M_contig1093:42228..42337Fucus serratus maleCDSF-serratus_M_contig1093 42229..42337 -
1690962641.8716047-CDS-F-serratus_M_contig1093:42228..423371690962641.8716047-CDS-F-serratus_M_contig1093:42228..42337Fucus serratus maleCDSF-serratus_M_contig1093 42229..42337 -
1622928949.3593712-CDS-F-serratus_M_contig1093:42729..428211622928949.3593712-CDS-F-serratus_M_contig1093:42729..42821Fucus serratus maleCDSF-serratus_M_contig1093 42730..42821 -
1690962641.8822708-CDS-F-serratus_M_contig1093:42729..428211690962641.8822708-CDS-F-serratus_M_contig1093:42729..42821Fucus serratus maleCDSF-serratus_M_contig1093 42730..42821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1093.855.1

>prot_F-serratus_M_contig1093.855.1 ID=prot_F-serratus_M_contig1093.855.1|Name=mRNA_F-serratus_M_contig1093.855.1|organism=Fucus serratus male|type=polypeptide|length=804bp
SPGPSPASSSPRPRGRPPASASASTPAVGIRPPEKQGAKKPSGKGQKPSP
SVPLKPPPSKTPSKTKKAAPADASPAAASAESPAAAAAPVATPARKPAGA
VDHTRVRPGPSANGSSARKKAGGGSGRSGGSSGGGGSKVYCVCRKADVTG
TMLSCDFCEDWFHVRCVGLKEQDCDRFSVYACPPCTEKGKKSTLHKKKKP
AAAEGVNGGGGDASGVGKGGSVGAKIPPPKCPAASTPQRSKPKPKSKATV
GEASAAASAGAKLSGGGSGGGGGNAGSRSGNTVGSGDGKSGGSGNSGTAG
STRPAEASSKPTSKSSKAATTTTTTATGAKSAASATPRKATSVAGAADAA
PAPATAVTSRPSGGRSDGGGEMKKPSGRVPLAERAVLVRTKRNWLHTSTS
TPSSAFYVPQEGDEVFYFPAGHTTFLRHHPDPRFHLRKTVPFFRKGDRAG
ATCRVLRVEYELPAKSDSFDPPVVAAVVTLVATNVASGKPKGSGAEHEVS
VRPSSVCAEFLVPRRKVLQGMGEGFRAGDKVTVQEPGGQLREGRVAAVED
STMKKPDAVAGGPAGGNGGLGGGTNKPPRQRPLWHGVSVEWETGGSDTVN
MWAMSWAKHFLPSVKKRRREGEGEEDSAVAWIKKADLDRGLLTPEQCTAA
AESIERSMKKQPDLFTLFVDPVTDDIAPNYSEEIALPMHLKLIQERLRRK
YYRQAEAILADLRLLERNCKTYNAAGSFIVNQCRKAVGMIETAIRGTLDP
SKASLGGSGSSAGGATPSKVGGDHGTSPNPAKKKKTSVGEVSVGGGRSGG
ISGS
back to top

mRNA from alignment at F-serratus_M_contig1093:32555..42821-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1093.855.1 ID=mRNA_F-serratus_M_contig1093.855.1|Name=mRNA_F-serratus_M_contig1093.855.1|organism=Fucus serratus male|type=mRNA|length=10267bp|location=Sequence derived from alignment at F-serratus_M_contig1093:32555..42821- (Fucus serratus male)
TCGCCCGGTCCATCCCCTGCTTCGTCTTCCCCGCGTCCTAGAGGTCGCCC TCCAGCTTCTGCTTCGGCGTCCACACCTGCCGTAGGAATAAGGTAAAGAG GGACAGTCGTCGGCCCGTAGAAGGCGCGCGAGGATGGTGCCCCTCGAGTG AAGAGTGAAACGGAAAAATCAACCGTCCAAACTTCGAGACGGGGCTCCGG TCTTGGGAAGGGGGGTGCTGGGTGGGGGGGGTATACATTGGCTACGGGGT AAGAACAGTGTCGAAGTTATTTTGAGACTGTGGGGTGCTGAGCGTATGTG CCCTGCCATTGGCGGGTGTTTGTTTGATTTTCCTCCCTCTTGTGCAATGG GAGAGGCGGAACCTTAGGTTCGAACTGAACCTCAAAAATGGGGGTGGGGG GGGTAAAAAAGGAACAGCTCAAAACCCCCGGTAAGGTCGTTCGTTGCCCG CTCACTCGTTCTTGATCGTTCGTTGCCCGTTCAGGCCGCCGGAAAAACAG GGCGCGAAAAAGCCGTCGGGCAAGGGCCAGAAGCCGTCTCCAAGTGTGCC TTTGAAGCCCCCCCCCTCGAAAACGCCTTCGAAGACGAAAAAGGTGAGCG GGGACGGTTGCGCGGGGGGGGGGGGGATGGGGAGGAGATCCGAAGAGGTT TTCATGTGTATGATAGAGGTTTACGCCAACAAGATGTTTCGTTCGACCAC GCTGGAGGAGAGGAGGGGAGAATGGCGTTATGTTTTTAAGTTTAGAAGGG ATGACCTTAGCCAAAGCTTGAGTGACATAACAGCAGTCTGTGTCAACAGC AGTGTAGTAAGAATGTCCGTATATTGTCTTGTACTTTCTTGGCAACGAAG GCGCACGCAGTTGGGGGGGGGGGCGGGCACGGTTATCCCCTCTCCGATGC GGCCCAAAATATAGCAAACCCGTCGCTAGAGCTACGGCGCAAAATTGTGC CTTGGAGAACCCTGCCCGCCTGATAATGAATGACTCCAATTGCTGTCCCT TTCTTTCTCAAACGTGCGCGCACCTCAGGCTGCTCCCGCTGATGCATCCC CGGCTGCGGCTTCGGCTGAGTCGCCGGCGGCGGCGGCGGCACCCGTCGCG ACACCGGCGAGAAAACCAGCGGGTGCTGTGGACCATACGCGGGTCCGACC GGGACCCAGCGCCAACGGCAGCTCAGCAAGAAAGAAGGCTGGCGGTGGCA GTGGTCGAAGCGGCGGCAGCAGCGGTGGTGGGGGCAGCAAAGTGTACTGT GTCTGCCGCAAGGCGGACGTGACAGGGACGATGCTTAGCTGCGATTTCTG CGAGGACTGGTTCCACGTGAGTTTTTTTTCGTGAAAATAGATACGAACAC TTATCGTTTTCCTGTGTGTCATAGTTTTGGTCTTATTTTTTACTTTTTTT TTCTGCGCTTTTGAAAGGATCGGTGTAGCTTTTAAGGTGCGCTTTCATTA TTTTGCTTTTGCTTTTTTACCAAGGGTGTTGTCTGAGAAAGGCGTTCGAT TGAAGGGGGAGTGGGAAGAGATTTTCGAATTGATAGCACCGACGTTCGGC ACAAACACACACGCACACACACACATGTATTGATCTCCCTTGGGATGATC AATGCGAGTGACCTAGAGTAATGCGATTACATGGTCGGATTGCGCATTTA TGGGCAATTTAATAAATACGCGCGCACACACACACACACACACACACACA CACACACCCACACAGGATCAATGCGAGTGGCATAGAATGACTAGGATGAC AGGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACACACACACACA CACACACACACACACACACACACACACACACACACACACACACACACACA CACACGTAAGCTAGGTGTAAAAATGAACTGCCTACCTGCGGGCTTGTCTT TATCTACTTGTATCTTTGTCTTCTCTTAGGTGCGGTGTGTGGGCCTCAAG GAGCAGGACTGCGACCGGTTCTCCGTGTACGCGTGCCCGCCGTGCACCGA GAAGGGCAAGAAATCGACTCTGCACAAGAAAAAGAAACCGGCTGCTGCAG AGGGCGTTAATGGCGGCGGTGGAGATGCCAGCGGGGTGGGCAAGGGCGGA AGCGTTGGAGCGAAGATCCCGCCACCGAAATGCCCCGCCGCGTCGACCCC CCAAAGGTCCAAGCCCAAGCCGAAGTCGAAGGCGACCGTTGGGGAGGCTA GTGCTGCTGCTTCCGCCGGGGCCAAGCTTAGCGGTGGCGGCAGTGGTGGT GGCGGCGGCAACGCCGGGAGTAGAAGCGGCAACACCGTCGGTAGCGGTGA TGGTAAGAGCGGTGGTAGTGGCAACAGCGGCACTGCGGGTTCTACGAGAC CTGCGGAGGCGTCTTCAAAACCGACCTCGAAGTCGTCGAAGGCCGCCACG ACGACCACGACCACGGCAACGGGGGCGAAGTCTGCGGCCAGTGCCACGCC GAGGAAGGCTACTTCGGTGGCCGGTGCTGCTGATGCTGCCCCTGCACCAG CGACCGCGGTAACTTCCAGACCGAGCGGTGGGAGAAGCGATGGAGGGGGG GAGATGAAAAAGCCCTCTGGACGTGTTCCGTTGGCAGGTAAGGGGGGGGT GGGCTTCCTTGCGTTGTTTAATCATCATTTTACATTACTGTGGAAACCCT GTCTTTTTTTTTTTTGCTTTCTACGAAAAACACGAGGCAACACTCGTACT TTCATGTAATGTAATATGCGCACACCGCGTTTGTTTTTTTGTGTTTTGTT TGGTGAATTTGTTTTTCGTTTATTTCTCGACTTTTTTTTCAAGTTCGTGA GCATATAAACTGCGTTTTTTTTCCTCAACAGCTGCTGCTATTGCGGTACT GGTGGCTATAATAGCTATAATAGCTACTCCCGACGTGTGTGTAATTTCCA CGATGTTACCAGCGCCATCACGCAGCATATTCTATATAGCACATTTTGTA CCTGGTAGCATTTTTCATATTTTCGGCATTTTTGTTTTCACTGTTTTTGT TCCAAATATATATATATATTATATTTATAGTGTACCTGGTAGCATTTTTC ATATTTTCGGCATTTTTGTTTTCACTGTTTTTGTTCCAAATATATAAATA TAATATATATATAGATATAGATACTTCCTCGCCTCGCATCGACTTGTTCT CTCCTCCTCCCCCCCTTCTTTTCAGTTATAATATACTGTATTATAATATA CTGTGGTGTAATACATTGCTACACAGCACTATATTTTTGTTTCGTTTATC AATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTATTTATTTATTTATTTATTTATTTATTTATTTACTTATTTTGGCCGGT CGACCCCGGTAGCTCAGTAGGCACCTCGTAACCTTCTGACACGTTGGGAC GTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAAAACTAAAAACC AAAATAAAAATGCCCAACGGGTGGAGAACGATTAATTCGTTAGTACACAA AATTCGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGC GACAAAAATCAAGGCACGCACCGCAGAAGGAAGGTGGAAGAAAAATCCTG TGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGCGATGTCC AGAATGGATGGGAAGAAAACACAACAAAACACACTTATTTACTTATTTAC TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT ATTTATTTATTTATTTATTTATTTTTGCTCCGTGCCGCCGCTCCATTTTT GTTTTAATCACTCGACAGAGAGAGCCGTCCTTGTCCGCACGAAGAGAAAT TGGCTGCACACTTCGACCTCCACCCCCAGCTCCGCCTTCTACGTTCCTCA GGAGGTAAGCGAAAATTAGTTCGAGGCCATAGTAAAGGAGGGGTGGTTTC GGGGTTATGATTATTTGGGCGGGAGAAGCGTCTGGGAGACCCAGCGTAAG GGGCGCGCGGTGGTGGATGGTGGTGGGTGTAACACGCTTCCCCGGGGATG GTCGTGGATGTGTCCCCTACCCTCGATTGTCTCCGCCAGCAGCCACCGCG GACACGCAGCAGGAGACAGCAGCAGTAGTGGCAGCAGCGAGAGCTCGTTT ACAGACGATATCGCTCCCTACTCTCGTGCGTGGCTTTTTTTTTGTGTGTG TGTGTGTGTGTGTGTGTGTGTTTGTAAATGTTTTCCCATTCTACAAAATC CTCCCGAGGGGGGATCAATGAGCATATATTCCGGGATGTTTAACGGTAGT TGATGGGCCTGTTCCCAGCACCTTCAATACACGTGTAACAAGTACTTTTC TGCACACAAGAGTCTATAATATATTGTCGCCAACGGCGTTGACTGCATTG GAGGAGGAGGAGAAGGAGGAGGAAAGTGGATTTTATTTATAGAGATTCGA TTCGCTCTGTGTTTTCTTGTGGGGTGAGATGTAAGGGGATATGCGTGTGT CATCGAAATCAATACGAGGGGTCGCCAGTCATTGTTTGCCTGCCTCTTGG TTCTAGGAGATGCTGCGTGCTCGTTTGGGGGTTTCCGGTGCCTTGAAAGG CTTTTTTATGCGAGTGCGGCGAGCTCGGGAGTCTCGCGTTTGTCTAGTCT TATCTCATACGTCGCTGCTTTCTGCCTTCGATTTTTGTTGGGGGCAATTT TTTTATCAACATATTTTCTCGTGGTTTTGTAGTTCTTTTTGTTTTAGCTA TTTTTTTCGTTACCTTCCAATGCCCTCCCATCCTCCGGCGCGCGCGTGTT TCCATCAAAAGGGGGACGAGGTGTTCTATTTCCCCGCCGGACACACCACC TTCTTGAGGCATCACCCCGACCCGAGGTTTCATCTGCGGAAAACCGTGCC CTTCTTCCGCAAGGTAGGTACAGTACAGTACGCTTGAAACAGTTTTAGAG CGTGCTCCAGGATGGTGGTAATCTGTTTATTTTGTTTTCCTTTACCTGGT AGATGTTACCGAGCAGGTCAGGTCTGTTTGTCGGTCGGTGTGGGCGAGTG GCTATTACTTAAATTACACATAACCGCGCAATCCGGCCCTGTCATCCTAG TCATTTCTCCGCCAATCGCATTGTTGCTTCCCCAAGGGAAGGATCAATGA TACTTGTGTGGGTTTTATGTGTTTGTATTTTTGTATTAAATTGCACATGA GTGCGCAATCTGGCCGGTGTCATCCAAGTCATTCTACGCTACTGGCAATT GATCTTCCCCAAGAATTAATTATTGTTCGTGACGCAAAAACCTCTGATGA GACGTGTTGTGTATTTTGGTTTGTGCGCGTTTCTCGGTCGCTTTTTTCCA CCAAAAAACCTCGATAATTTTGGAAAAAATATTTTCCCCTTCCACGAAAA GGCGAGAGGATAATTTTGGGGAAAAGATTTTGCTTCCAACAGAAAACGTG GGAAGAGTTTTTCACCAAGCCATCCTCCATCTCTGAAACGGAACATCGAA ATAATATATCTAAACGTATAAGTAACACATATAAACACACAAACACACAC ACTCACACATACACATCCTTCGAGTGGCATAGAATTACTATTAATAGGAT GACAGGGCCAGATTGCGCGGTTATGTGCAATTTAATAAACACACACACAC AATATAAATAGATAGACAAATAAAAGCAAAAATAAAATAAAAATCCTACA CACAAAAAAATAGTATGCTATTCTATGCTAAAATGTTTGACAAAACTGAA ATGAAATCAGGGAGACCGCGCGGGAGCGACCTGCCGAGTCCTGCGGGTGG AGTACGAGCTCCCGGCGAAGAGCGACAGCTTTGATCCTCCCGTGGTGGCT GCTGTTGTTACCCTGGTGGCGACGAACGTGGCTAGCGGCAAGCCCAAGGG AAGCGGCGCCGAGCACGAGGTATCCGTGAGGCCCAGCAGCGTCTGCGCCG AATTCTTGGTCCCTCGCCGGAAGGTTCTGCAGGTGAGGAAAGAGGGAAAG CGGGGTTGGGAGTGTATGGGGTGGTTGGGGGCAGGGGGTGTTTTGAGGGG AACACGAAAGAAAGCAAAAATAGTTGCCCATCCCTTACGCTTGTTGTGCA GGTCAGGGCTGACCGAACCTCGCCAGCGTCCTTCTTCCGCATGTAGTACT CCTTCCGCAGTTTCGAGGTTACCCACCGATTGCTTTCGAACATTGCCGCA ACTCTGCTAAAAAAGTCATCGCCGCCCTTTTGTTGCTTCTCTCTGAGGAG CTCATCGATCCCCCTGTGGCTGAGAGCGTTCTCTAAACACCGCAAGAGAA AAATTCTCAACGATGTGGAAACTCGACCCCCTTTTTTTTTATCAATTTTG TCTTGTTTTCCTATTTTCTTATATATATTTTTTATCTTGTCCTGTATTTT GCACCCTGCCCCCCCCCCCCCCCCCTCGATACAGGGCATGGGCGAAGGAT TCCGAGCCGGAGACAAGGTGACCGTGCAAGAGCCGGGAGGTCAGCTCCGC GAGGGCAGGGTGGCTGCAGTCGAAGACTCGACGATGAAGAAGCCAGACGC TGTTGCCGGGGGCCCCGCCGGAGGCAACGGTGGCCTTGGCGGTGGAACCA ATAAACCGCCCCGTCAACGCCCTCTGTGGCATGGAGTCAGCGTGGAATGG GAAACCGGTGGTTCGGTGAGATCATAAGTCGCGAATATAGTGTGCGGGAT GGGAGTTATAGGTGATAAGGAGGCGGGGCAAGGAGAGGCGGTGGGGGGGC GGCGGGAGGGCGAAGTATTCCTGGTATGCGCCCGTCTAAGGAGCTCGACC TCTTGGCGAGCGTAGATGGTAATAAGCATTTCCTCTATAGCGCCGTCCTC GCGTGCCGCCACCTAAAGTCGACCCCTGCTTTCCGTGGCGTGTGCCAGCA GAATTGTTTTGGGGTTGTTTCGTAAGAGTGCTGGTAGACGTCGAACGGCG TAGGCGACAACCACAGAAATGACATTCATCCGTTCCCCATCCTATATATC GTTTTCAATCCTGTTCTATACGGTCACATATCATTTTCCAATCTCTTTTT TGTCCGTTGATCTTATTCAGGGACCCCCCCCCCCCCCCACAAAAGAAGCC TCTGTCTGTTTTGTTATTTTGTGAGTGGGCGTGGGTGTTTTTTTTTGTTT TGTTTTTTTTACCTCGTTGCAGACTCGTGCCCTTCGTTCTAACGATATAT GTCACTTGATTCCTCTCCTCTTTTCTACTCTCCTCTCCTCTCCTCTTCTC ATCCCGTTACGCCACGTCGCGTGACGCGACACACCCCAGGACACGGTGAA CATGTGGGCGATGAGCTGGGCGAAGCACTTCCTCCCCTCGGTGAAGAAGC GGAGACGGGAGGGAGAAGGGGAGGAAGACTCGGCCGTGGCGTGGATAAAG AAAGCTGACTTGGACCGAGGCCTGCTCACCCCCGAACAGGTTTGTTTGCC CACTCGTGTGCTGGGAGGGGGATTGGGTCATGGGCGACTAGTGTTTTAGA CTGGCCCAGTGGTCTTTGGGACTTCTGTACGTGAGCTATATATATATACT GCGTTCACTTGGTTAATCTATAAAAAAATGGCTGGATGTTTTTTTAAAGG CAGCTGTTGCTTCGTCCCTCCATCCCGCCCCGCCTTTTTGGCGTCTTTGG CGGTCGCAGTGCACGGCAGCGGCGGAGTCCATTGAGCGCTCGATGAAGAA ACAGCCCGATCTATTCACGCTGTTCGTCGACCCTGTCACCGACGACATCG CGCCCAACTACAGTGAGGTGCGTCGTGATACTGGAACTCCTTCAAACACG CCTGCCGTTTCGTGTGAAACCCTTCCGTGTGGGTGGGTGGGGGTGGTAAA GTGTCCCTGCAATCAATCCAACGTGTGCGTGGGGGGATGAGAAGGTCTAG GTATCTATTCAAATGGCACATGACCGCGCATTCCGCCCCTCACACCCTAT AATGATTCTATGCCACTCGCATTGTCCAACTAATACCAAGAGGTATTAAG GGATCATATATTCTTGTGTGTGTATTTTTTTCTGGAGTGCTTTCTGTTCG TATAGGGGGAATCAAGTTGAGCAGAAACGCCACCTTATATCTTATGACCC ATACCCGGTATCTCGGATCTTGGATACATGCTTCTTATTAAAATAGATGT GAGGCTTGGTCCCCGCGGCATAACGCCTGTTAGGGTCGGTGCCACCGGGT AAGGTCGTGAAGGGTCCCTCATCCTCTTGTCATAATTCCATAATTTCCTT GCTTAGGCCGTTTCTTGCGAGGATTTTTTTCAAGAGTTTTTTGGATTGGA CGGCCCCCAAAAAAATCGTTGAAAAGATTCGTCAGGTGCACAATCTGAAG ATCTCGAACAGTCTCTTACTTGATCCAAGAGCTTTTTTTCAAACTGATAT TTCTGGTTTTATATGCGTAGTTAGCGGCGTATAGTGTCGGGGGCTGCGTA TCTTAATAATATCAAATTTTAGACGCGTCTTCGGAGACAGAGAGCACACC CATCACCGATCGGAGCACACTGAGTGGACAGCAAACAACCTGTCCTCACA CGAGAGAGCGAACAAAGCAAGATGGTGGTAGAGGCGCTACATGCCACTCG GCTATTGTACGAGAGCTGTACGGCTTTGTTCTTGCACTTTGTGCAAGGCA GACACGGCCACGGCAAAAACGCAGTTGTGGCCAGATCATCAAAACACCTG ACGCCATCGGTTTGGCCGTGTGGGAGATCGGAGCGGGGGATGAAGTGCCC GCTGCTGCTGATTACGTGCGAGGGAGTCGTTGCCCCCCCGAAGAATAGGG CGAAGGGTAGAAAAATTGTGGTGTGCAGGATGTGTGTGGGTTTGTGGGGT GGCGCTTCACGCCCTCTGTCACGATTTGAACTCAATCCCGCCTCATCGTG TACTGATTTCAGTTCTATTATCTAGTAATCCAAAAATTTCCTGGGCTGGG AGTATTTTTTTTTGTCCCGAAGAAATTTTTGGCGAAAAATGTTTCCGGGA AAATTTCCTCCGAAGAAACATTTTTTTTCCCAAGGAATGTTTGGGCCCTC TAACCCCAAAAAATCTTGAAAAAAAATCCTCGTAAGAAACGGTCTTGGTG AAAGTAGTTTGAGTCTTTTTGCGGAGATTTTGTGCTTCTTATTTCTCGGT ACGGTAAACACTGTATGTACTTTGTTTTGATTTGTTAGGGGCTTTTGTTG GGGCGGGGTGGGCCTTTCTCAGGGAGAATCGTCGAAGAAAGGATAGGCTG GGTACCTGATCACACCACGCGCCCCCGCCCATGCTGATCTGGTGTCGCTG CCTCGGCGTCCTCCCAATCGGGTGCTGTCTCTCGGGGACGACCGCTGTCC CCCCCCCCCATACCCTCAACGCCTCCCTACACGAAACCCCTCAGGAAATC GCTCTCCCGATGCATCTCAAGCTCATCCAGGAGCGACTGCGACGCAAGTA CTACCGGCAGGCGGAGGCCATCCTTGCCGACCTAAGGCTACTCGAGCGCA ACTGCAAAACGTACAATGCGGCTGGGAGGTGAGGAGGAGCGATGGGGTCA GCACCTCACGTGTCCGTTCGGCGATATTAATAGTAATAGTGCCGTAGGTA GGCTAAGTGTTTTTTGTTTGTTTGTTTTTTTCTGAATGTTGTTTCTCGTT GTATGTTGATTGTATGTTGAAGGATAACGGGCAAAATATTTGTGCGCTTT CTATGAATATTCTCCCATATTTTTGCTGCGCCCTCTTCGTTTTTGCTTAT TTTTGTTTCTTTTATTGCGTCACTTCCCACTCTCTTGTTGTATGTTTTAT GTTTCATTTTTGCCGGAGCAGCATTCCTTTTCCTACCCCTTCACTCTCTT ATTTTCCCCCTGTGCACGGGGCTTCGCTCTTTCACACGTTTGCTCCTTAA CGATAAGACGACCCCCCCCCAACCTTTTCTCCCCTTCTTCCCCTCGCTTT CTTTCCCTCTATCCCTTCACCTACTGTCCCCCAACCCAACCCCGCCCCCG CGCGCGCGCGCGCCTTCGGGCAACGCGGCACAGTTTCATTGTGAACCAGT GCAGAAAGGCTGTGGGCATGATCGAAACCGCTATTCGCGGGACTCTCGAC CCGTCGAAAGCTTCCCTCGGTGGCAGCGGTAGTAGCGCAGGCGGCGCCAC ACCCTCTAAGGTTGGCGGAGATCACGGCACATCCCCGAATCCTGCCAAGA AGAAAAAAACGTCGGTCGGCGAGGTCAGCGTGGGCGGTGGGCGGAGCGGC GGTATCTCCGGCAGCGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1093:32555..42821-

>mRNA_F-serratus_M_contig1093.855.1 ID=mRNA_F-serratus_M_contig1093.855.1|Name=mRNA_F-serratus_M_contig1093.855.1|organism=Fucus serratus male|type=CDS|length=4824bp|location=Sequence derived from alignment at F-serratus_M_contig1093:32555..42821- (Fucus serratus male)
TCGCCCGGTCCATCCCCTGCTTCGTCTTCCCCGCGTCCTAGAGGTCGCCC
TCCAGCTTCTGCTTCGGCGTCCACACCTGCCGTAGGAATAAGTCGCCCGG
TCCATCCCCTGCTTCGTCTTCCCCGCGTCCTAGAGGTCGCCCTCCAGCTT
CTGCTTCGGCGTCCACACCTGCCGTAGGAATAAGGCCGCCGGAAAAACAG
GGCGCGAAAAAGCCGTCGGGCAAGGGCCAGAAGCCGTCTCCAAGTGTGCC
TTTGAAGCCCCCCCCCTCGAAAACGCCTTCGAAGACGAAAAAGGCCGCCG
GAAAAACAGGGCGCGAAAAAGCCGTCGGGCAAGGGCCAGAAGCCGTCTCC
AAGTGTGCCTTTGAAGCCCCCCCCCTCGAAAACGCCTTCGAAGACGAAAA
AGGCTGCTCCCGCTGATGCATCCCCGGCTGCGGCTTCGGCTGAGTCGCCG
GCGGCGGCGGCGGCACCCGTCGCGACACCGGCGAGAAAACCAGCGGGTGC
TGTGGACCATACGCGGGTCCGACCGGGACCCAGCGCCAACGGCAGCTCAG
CAAGAAAGAAGGCTGGCGGTGGCAGTGGTCGAAGCGGCGGCAGCAGCGGT
GGTGGGGGCAGCAAAGTGTACTGTGTCTGCCGCAAGGCGGACGTGACAGG
GACGATGCTTAGCTGCGATTTCTGCGAGGACTGGTTCCACGCTGCTCCCG
CTGATGCATCCCCGGCTGCGGCTTCGGCTGAGTCGCCGGCGGCGGCGGCG
GCACCCGTCGCGACACCGGCGAGAAAACCAGCGGGTGCTGTGGACCATAC
GCGGGTCCGACCGGGACCCAGCGCCAACGGCAGCTCAGCAAGAAAGAAGG
CTGGCGGTGGCAGTGGTCGAAGCGGCGGCAGCAGCGGTGGTGGGGGCAGC
AAAGTGTACTGTGTCTGCCGCAAGGCGGACGTGACAGGGACGATGCTTAG
CTGCGATTTCTGCGAGGACTGGTTCCACGTGCGGTGTGTGGGCCTCAAGG
AGCAGGACTGCGACCGGTTCTCCGTGTACGCGTGCCCGCCGTGCACCGAG
AAGGGCAAGAAATCGACTCTGCACAAGAAAAAGAAACCGGCTGCTGCAGA
GGGCGTTAATGGCGGCGGTGGAGATGCCAGCGGGGTGGGCAAGGGCGGAA
GCGTTGGAGCGAAGATCCCGCCACCGAAATGCCCCGCCGCGTCGACCCCC
CAAAGGTCCAAGCCCAAGCCGAAGTCGAAGGCGACCGTTGGGGAGGCTAG
TGCTGCTGCTTCCGCCGGGGCCAAGCTTAGCGGTGGCGGCAGTGGTGGTG
GCGGCGGCAACGCCGGGAGTAGAAGCGGCAACACCGTCGGTAGCGGTGAT
GGTAAGAGCGGTGGTAGTGGCAACAGCGGCACTGCGGGTTCTACGAGACC
TGCGGAGGCGTCTTCAAAACCGACCTCGAAGTCGTCGAAGGCCGCCACGA
CGACCACGACCACGGCAACGGGGGCGAAGTCTGCGGCCAGTGCCACGCCG
AGGAAGGCTACTTCGGTGGCCGGTGCTGCTGATGCTGCCCCTGCACCAGC
GACCGCGGTAACTTCCAGACCGAGCGGTGGGAGAAGCGATGGAGGGGGGG
AGATGAAAAAGCCCTCTGGACGTGTTCCGTTGGCAGGTGCGGTGTGTGGG
CCTCAAGGAGCAGGACTGCGACCGGTTCTCCGTGTACGCGTGCCCGCCGT
GCACCGAGAAGGGCAAGAAATCGACTCTGCACAAGAAAAAGAAACCGGCT
GCTGCAGAGGGCGTTAATGGCGGCGGTGGAGATGCCAGCGGGGTGGGCAA
GGGCGGAAGCGTTGGAGCGAAGATCCCGCCACCGAAATGCCCCGCCGCGT
CGACCCCCCAAAGGTCCAAGCCCAAGCCGAAGTCGAAGGCGACCGTTGGG
GAGGCTAGTGCTGCTGCTTCCGCCGGGGCCAAGCTTAGCGGTGGCGGCAG
TGGTGGTGGCGGCGGCAACGCCGGGAGTAGAAGCGGCAACACCGTCGGTA
GCGGTGATGGTAAGAGCGGTGGTAGTGGCAACAGCGGCACTGCGGGTTCT
ACGAGACCTGCGGAGGCGTCTTCAAAACCGACCTCGAAGTCGTCGAAGGC
CGCCACGACGACCACGACCACGGCAACGGGGGCGAAGTCTGCGGCCAGTG
CCACGCCGAGGAAGGCTACTTCGGTGGCCGGTGCTGCTGATGCTGCCCCT
GCACCAGCGACCGCGGTAACTTCCAGACCGAGCGGTGGGAGAAGCGATGG
AGGGGGGGAGATGAAAAAGCCCTCTGGACGTGTTCCGTTGGCAGAGAGAG
CCGTCCTTGTCCGCACGAAGAGAAATTGGCTGCACACTTCGACCTCCACC
CCCAGCTCCGCCTTCTACGTTCCTCAGGAGAGAGAGCCGTCCTTGTCCGC
ACGAAGAGAAATTGGCTGCACACTTCGACCTCCACCCCCAGCTCCGCCTT
CTACGTTCCTCAGGAGGGGGACGAGGTGTTCTATTTCCCCGCCGGACACA
CCACCTTCTTGAGGCATCACCCCGACCCGAGGTTTCATCTGCGGAAAACC
GTGCCCTTCTTCCGCAAGGGGGACGAGGTGTTCTATTTCCCCGCCGGACA
CACCACCTTCTTGAGGCATCACCCCGACCCGAGGTTTCATCTGCGGAAAA
CCGTGCCCTTCTTCCGCAAGGGAGACCGCGCGGGAGCGACCTGCCGAGTC
CTGCGGGTGGAGTACGAGCTCCCGGCGAAGAGCGACAGCTTTGATCCTCC
CGTGGTGGCTGCTGTTGTTACCCTGGTGGCGACGAACGTGGCTAGCGGCA
AGCCCAAGGGAAGCGGCGCCGAGCACGAGGTATCCGTGAGGCCCAGCAGC
GTCTGCGCCGAATTCTTGGTCCCTCGCCGGAAGGTTCTGCAGGGAGACCG
CGCGGGAGCGACCTGCCGAGTCCTGCGGGTGGAGTACGAGCTCCCGGCGA
AGAGCGACAGCTTTGATCCTCCCGTGGTGGCTGCTGTTGTTACCCTGGTG
GCGACGAACGTGGCTAGCGGCAAGCCCAAGGGAAGCGGCGCCGAGCACGA
GGTATCCGTGAGGCCCAGCAGCGTCTGCGCCGAATTCTTGGTCCCTCGCC
GGAAGGTTCTGCAGGGCATGGGCGAAGGATTCCGAGCCGGAGACAAGGTG
ACCGTGCAAGAGCCGGGAGGTCAGCTCCGCGAGGGCAGGGTGGCTGCAGT
CGAAGACTCGACGATGAAGAAGCCAGACGCTGTTGCCGGGGGCCCCGCCG
GAGGCAACGGTGGCCTTGGCGGTGGAACCAATAAACCGCCCCGTCAACGC
CCTCTGTGGCATGGAGTCAGCGTGGAATGGGAAACCGGTGGTTCGGGCAT
GGGCGAAGGATTCCGAGCCGGAGACAAGGTGACCGTGCAAGAGCCGGGAG
GTCAGCTCCGCGAGGGCAGGGTGGCTGCAGTCGAAGACTCGACGATGAAG
AAGCCAGACGCTGTTGCCGGGGGCCCCGCCGGAGGCAACGGTGGCCTTGG
CGGTGGAACCAATAAACCGCCCCGTCAACGCCCTCTGTGGCATGGAGTCA
GCGTGGAATGGGAAACCGGTGGTTCGGACACGGTGAACATGTGGGCGATG
AGCTGGGCGAAGCACTTCCTCCCCTCGGTGAAGAAGCGGAGACGGGAGGG
AGAAGGGGAGGAAGACTCGGCCGTGGCGTGGATAAAGAAAGCTGACTTGG
ACCGAGGCCTGCTCACCCCCGAACAGGACACGGTGAACATGTGGGCGATG
AGCTGGGCGAAGCACTTCCTCCCCTCGGTGAAGAAGCGGAGACGGGAGGG
AGAAGGGGAGGAAGACTCGGCCGTGGCGTGGATAAAGAAAGCTGACTTGG
ACCGAGGCCTGCTCACCCCCGAACAGTGCACGGCAGCGGCGGAGTCCATT
GAGCGCTCGATGAAGAAACAGCCCGATCTATTCACGCTGTTCGTCGACCC
TGTCACCGACGACATCGCGCCCAACTACAGTGAGTGCACGGCAGCGGCGG
AGTCCATTGAGCGCTCGATGAAGAAACAGCCCGATCTATTCACGCTGTTC
GTCGACCCTGTCACCGACGACATCGCGCCCAACTACAGTGAGGAAATCGC
TCTCCCGATGCATCTCAAGCTCATCCAGGAGCGACTGCGACGCAAGTACT
ACCGGCAGGCGGAGGCCATCCTTGCCGACCTAAGGCTACTCGAGCGCAAC
TGCAAAACGTACAATGCGGCTGGGAGGAAATCGCTCTCCCGATGCATCTC
AAGCTCATCCAGGAGCGACTGCGACGCAAGTACTACCGGCAGGCGGAGGC
CATCCTTGCCGACCTAAGGCTACTCGAGCGCAACTGCAAAACGTACAATG
CGGCTGGGAGTTTCATTGTGAACCAGTGCAGAAAGGCTGTGGGCATGATC
GAAACCGCTATTCGCGGGACTCTCGACCCGTCGAAAGCTTCCCTCGGTGG
CAGCGGTAGTAGCGCAGGCGGCGCCACACCCTCTAAGGTTGGCGGAGATC
ACGGCACATCCCCGAATCCTGCCAAGAAGAAAAAAACGTCGGTCGGCGAG
GTCAGCGTGGGCGGTGGGCGGAGCGGCGGTATCTCCGGCAGCTTTCATTG
TGAACCAGTGCAGAAAGGCTGTGGGCATGATCGAAACCGCTATTCGCGGG
ACTCTCGACCCGTCGAAAGCTTCCCTCGGTGGCAGCGGTAGTAGCGCAGG
CGGCGCCACACCCTCTAAGGTTGGCGGAGATCACGGCACATCCCCGAATC
CTGCCAAGAAGAAAAAAACGTCGGTCGGCGAGGTCAGCGTGGGCGGTGGG
CGGAGCGGCGGTATCTCCGGCAGC
back to top