mRNA_F-serratus_M_contig1091.849.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: UPI00106C8F71 (uncharacterized protein LOC114545138 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C8F71) HSP 1 Score: 196 bits (498), Expect = 3.890e-59 Identity = 96/186 (51.61%), Postives = 129/186 (69.35%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ + L +C IC E W + +A+ + C RC+RDKK K+FS NDMDPG+VP QL+GLTQVEEMLI++ CPIM+VYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRRQG + HKD VRR +VF A++WL+ NNPF+ DI I+ D + LP+NG ++L Sbjct: 1 MH-SFHLDQEHLEHRQCTICKETWPTKQN------LAADPFVCYRCQRDKKSPKNFSTGNDMDPGTVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADETHKDFTVRRHKVFEAISWLKTNNPFFKDIEIDRDIIQRLPENGVPEEL 179
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A7D9LMQ1_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LMQ1_PARCT) HSP 1 Score: 189 bits (481), Expect = 1.480e-55 Identity = 94/183 (51.37%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 10 AFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 +F ++ + L +C +C E W + +AS Y C RCKRDKK K FS NDMDPG VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E H+D VRR +V A+ WL+ NNPF+ +I I+ D + +LP+NG +L Sbjct: 104 SFHLDQEHLEHRQCTMCKEAWPTRQN------LASEVYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDEL 280
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A6S7JXT5_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JXT5_PARCT) HSP 1 Score: 189 bits (480), Expect = 1.850e-55 Identity = 96/186 (51.61%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ + L +C +C E W + +AS Y C RCKRDKK K FS NDMDPG VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E H+D VRR +V A+ WL+ NNPF+ +I I+ D + +LP+NG +L Sbjct: 113 MH-SFHLDQEHLEHRQCIMCKEAWPTRQN------LASEVYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDEL 291
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A6S7G3B5_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G3B5_PARCT) HSP 1 Score: 186 bits (472), Expect = 1.940e-55 Identity = 93/178 (52.25%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALP 534 MH +F ++ + L +C +C E W + + S Y C RCKRDKK K FS NDMDPG+VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E H+D VRR +V A+ WL+ NNPF+ DI I+ D + +LP Sbjct: 128 MH-SFHLDQEHLEHRQCTMCKEAWPTRQN------LGSEVYICYRCKRDKKSPKKFSAENDMDPGTVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKDIEIDRDVIQSLP 298
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: UPI00106CBCF8 (uncharacterized protein LOC114518711 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CBCF8) HSP 1 Score: 194 bits (493), Expect = 9.730e-55 Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ + L +C IC E W + +A+ + C RCKRDKK K+FS NDMDPG VP QL+GLTQVEEMLI++ CPIM+VYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRRQG + HKD VRR RV A+ WL+ NNPF+ DI I+ D + +LP+NG ++L Sbjct: 287 MH-SFHLDQEHLEHRQCTICKEAWPTRQN------LAADPFVCYRCKRDKKSPKNFSAGNDMDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADETHKDFTVRRHRVLEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPKEL 465
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A7D9I697_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I697_PARCT) HSP 1 Score: 187 bits (474), Expect = 2.790e-54 Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 1 Query: 19 VELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 + + L RC IC E W + +AS + C RCKRDKK K FS NDMDPG+VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E AH+D VRR +V + WL+ NNPF+ +I I+ D + +LP+NG +L Sbjct: 221 ADQEHLEHRRCTICKEAWPICQN------LASEVFICYRCKRDKKLPKKFSAKNDMDPGTVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDAHQDFTVRRHKVLEDVLWLKTNNPFFKNIKIDRDVIQSLPENGIPNEL 394
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A7D9LY68_PARCT (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LY68_PARCT) HSP 1 Score: 191 bits (484), Expect = 6.550e-54 Identity = 96/186 (51.61%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ + L +C +C E W + +AS Y C RCKRDK+ K FS NDMDPG VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E H D VRR +VF A+ WL+ NNPF+ +I I+ D + +LP+NG +L Sbjct: 128 MH-SFHLDQEHLEHRQCSVCKEAWPTRQN------LASEVYICYRCKRDKRSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDEL 306
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A7D9LNP2_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LNP2_PARCT) HSP 1 Score: 190 bits (482), Expect = 8.540e-54 Identity = 96/186 (51.61%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ + L +C +C E W + +AS Y C RCKRDKK K FS NDMDPG VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E H+D VRR +V A+ WL+ NNPF+ +I I+ D + +LP+NG +L Sbjct: 270 MH-SFHLDQEHLEHRQCTMCKEAWPTRQN------LASEVYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPHEL 448
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: UPI00106D8CF5 (uncharacterized protein LOC114518658 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D8CF5) HSP 1 Score: 192 bits (487), Expect = 1.500e-53 Identity = 95/186 (51.08%), Postives = 127/186 (68.28%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ L +C IC E W + +A+ + C RC+RDKK K+FS NDMDPG VP QL+GLTQVEEMLI++ CPIM+VYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR+G + HKD VRR +VF A+ WL+ NNPF+ DI I+ D + +LP+NG ++L Sbjct: 207 MH-SFHLDQDHLEHRQCTICKEAWPTRQN------LAADPFVCYRCQRDKKSPKNFSAGNDMDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRRGADQTHKDFTVRRHKVFEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPEEL 385
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Match: A0A6S7GE38_PARCT (Helitron_like_N domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GE38_PARCT) HSP 1 Score: 189 bits (480), Expect = 2.050e-53 Identity = 96/186 (51.61%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 1 MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKKPVKSFSHANDMDPGSVPNQLKGLTQVEEMLIAKGCPIMRVYRLKGGQRGYGGHVVNLAQNIGDFVNSLPRPAKDLPIIVVRRQGGEGAHKDLLVRRQRVFTALNWLRANNPFYSDIHINDDNLNALPDNGSLQDL 558 MH +F ++ + L +C +C E W + +AS Y C RCKRDKK K FS NDMDPG VP QL+GLTQVEEMLI++ CPIMRVYR GGQRGY GHV+NL Q+I F+N LP DLP+++VRR G E H+D VRR +V A+ WL+ NNPF+ +I I+ D + +LP+NG +L Sbjct: 113 MH-SFHLDQEHLEHRQCIMCKEAWPTRQN------LASEVYICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDEL 291 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1091.849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1091.849.1 >prot_F-serratus_M_contig1091.849.1 ID=prot_F-serratus_M_contig1091.849.1|Name=mRNA_F-serratus_M_contig1091.849.1|organism=Fucus serratus male|type=polypeptide|length=186bp MHKAFTVELQKLRPGRCQICGERWFAALSSTQAAVVASGQYTCVRCKRDKback to top mRNA from alignment at F-serratus_M_contig1091:281864..282421+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1091.849.1 ID=mRNA_F-serratus_M_contig1091.849.1|Name=mRNA_F-serratus_M_contig1091.849.1|organism=Fucus serratus male|type=mRNA|length=558bp|location=Sequence derived from alignment at F-serratus_M_contig1091:281864..282421+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1091:281864..282421+ >mRNA_F-serratus_M_contig1091.849.1 ID=mRNA_F-serratus_M_contig1091.849.1|Name=mRNA_F-serratus_M_contig1091.849.1|organism=Fucus serratus male|type=CDS|length=1116bp|location=Sequence derived from alignment at F-serratus_M_contig1091:281864..282421+ (Fucus serratus male)back to top |