mRNA_F-serratus_M_contig1091.848.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1091.848.1
Unique NamemRNA_F-serratus_M_contig1091.848.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1091.848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1091contigF-serratus_M_contig1091:281027..281374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size174
Cds size174
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928948.0101402-CDS-F-serratus_M_contig1091:281026..2811031622928948.0101402-CDS-F-serratus_M_contig1091:281026..281103Fucus serratus maleCDSF-serratus_M_contig1091 281027..281103 -
1690962641.152708-CDS-F-serratus_M_contig1091:281026..2811031690962641.152708-CDS-F-serratus_M_contig1091:281026..281103Fucus serratus maleCDSF-serratus_M_contig1091 281027..281103 -
1622928948.0235128-CDS-F-serratus_M_contig1091:281277..2813741622928948.0235128-CDS-F-serratus_M_contig1091:281277..281374Fucus serratus maleCDSF-serratus_M_contig1091 281278..281374 -
1690962641.1624696-CDS-F-serratus_M_contig1091:281277..2813741690962641.1624696-CDS-F-serratus_M_contig1091:281277..281374Fucus serratus maleCDSF-serratus_M_contig1091 281278..281374 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1091.848.1prot_F-serratus_M_contig1091.848.1Fucus serratus malepolypeptideF-serratus_M_contig1091 281027..281374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1091.848.1

>prot_F-serratus_M_contig1091.848.1 ID=prot_F-serratus_M_contig1091.848.1|Name=mRNA_F-serratus_M_contig1091.848.1|organism=Fucus serratus male|type=polypeptide|length=58bp
MFATVFFYLGAGESVVSEQPPARPRQQQHRRLCRRVVSSWRARKAASAAA
FAFACCCC
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mRNA from alignment at F-serratus_M_contig1091:281027..281374-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1091.848.1 ID=mRNA_F-serratus_M_contig1091.848.1|Name=mRNA_F-serratus_M_contig1091.848.1|organism=Fucus serratus male|type=mRNA|length=348bp|location=Sequence derived from alignment at F-serratus_M_contig1091:281027..281374- (Fucus serratus male)
ATGTTTGCAACGGTATTTTTTTACCTAGGAGCTGGCGAGTCCGTAGTGTC
CGAGCAGCCACCCGCGCGGCCTCGGCAGCAGCAGCATCGGCGGCTGTGCA
ACGGAAGTGCAAAGCCGTATAGGTACATCGCAGAGAGGGCGAGCGACGTA
TTAATTTGGGAATATTTCCAGCGGGCTGTGTGATGATGAAAAACTGGTCG
GAGAAGAGACAGGAGCCTAATGCCCCTATTCAACAATTTAGTACATCGTA
CGACACCTTTGTGATTATCAGGCCGCCGGGTCGTTTCTTCATGGAGAGCC
CGTAAAGCCGCCTCCGCCGCTGCGTTTGCGTTCGCCTGCTGCTGTTGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1091:281027..281374-

>mRNA_F-serratus_M_contig1091.848.1 ID=mRNA_F-serratus_M_contig1091.848.1|Name=mRNA_F-serratus_M_contig1091.848.1|organism=Fucus serratus male|type=CDS|length=348bp|location=Sequence derived from alignment at F-serratus_M_contig1091:281027..281374- (Fucus serratus male)
ATGTTTGCAACGGTATTTTTTTACCTAGGAGCTGGCGAGTCCGTAGTGTC
CGAGCAGCCACCCGCGCGGCCTCGGCAGCAGCAGCATCGGCGGCTGTATG
TTTGCAACGGTATTTTTTTACCTAGGAGCTGGCGAGTCCGTAGTGTCCGA
GCAGCCACCCGCGCGGCCTCGGCAGCAGCAGCATCGGCGGCTGTGCCGCC
GGGTCGTTTCTTCATGGAGAGCCCGTAAAGCCGCCTCCGCCGCTGCGTTT
GCGTTCGCCTGCTGCTGTTGCGCCGCCGGGTCGTTTCTTCATGGAGAGCC
CGTAAAGCCGCCTCCGCCGCTGCGTTTGCGTTCGCCTGCTGCTGTTGC
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