mRNA_F-serratus_M_contig109.830.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig109.830.1
Unique NamemRNA_F-serratus_M_contig109.830.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 9.000e-120
Identity = 184/224 (82.14%), Postives = 205/224 (91.52%), Query Frame = 1 
Query:    1 MYKTIALA-LVALVGADAFVSPVATSFSGSSVSRRSSAAKASTKAMRMSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            M K +ALA L AL GADAFVSPVATSFSGS+V++R +A++A++KAM+MS++EE FVPDMDRR A+NLIL G+IGVNVLGLA+PY+AFFVPXXXXXXXX V AKDAIGNEVT ESWLATH  GSREL EGIKGDATYLVVTEDKK+QDYGIVAVCTHLGCVVPWN AENKF+CPCHGSQYD TGKV+RGPAPLSLALSH+EE DGKV+FKEWKETDFRTGD PWW
Sbjct:    1 MIKAVALAALAALFGADAFVSPVATSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 282 bits (721), Expect = 2.340e-89
Identity = 142/211 (67.30%), Postives = 166/211 (78.67%), Query Frame = 1 
Query:   46 DAFVSPVATSFSGSSVSRRSSAAKASTKAMR---MSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
             AFV+P  +SF+G+ V      +KA TK++    MSA+E+AFVPDM+RRVA+NLIL G+ GV VLGLA+PY+AFFVP         V+A+DA+G +VT E WL TH  GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW  AENKFICPCHGSQY+A GKVVRGPAPLSLALSHI+   GKVVFK W ETDFRTG++PWW
Sbjct:   18 SAFVAP--SSFAGAKV-----VSKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 276 bits (705), Expect = 5.910e-87
Identity = 138/206 (66.99%), Postives = 162/206 (78.64%), Query Frame = 1 
Query:   52 FVSPVATSFSGSSVSRRSSAAKASTKAMRMSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            FV+P A  F+G+ V  +  A  +S  A++MSA+E+AFVPDM+RRVA+N IL G+ GV VLGLAIPY++FFVP         V+A+DA+G +VT E W+ATH  GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW  AENKFICPCHGSQY+  GKVVRGPAPLSLALSHIE   G VVFK W ETDFRTG++PWW
Sbjct:   20 FVAPSA--FTGARVLSKPVAQASS--AIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.490e-82
Identity = 118/185 (63.78%), Postives = 148/185 (80.00%), Query Frame = 1 
Query:  115 KASTKAMRMSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            +A  +AM M+ASE+AFVPDMDRR  +N IL  ++GV  LG+A+PY++FFVP          +AKDA+GN+VT   WL TH AG+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWNAA+ KF+CPCHGSQY+  GKVVRGPAPLSLAL+H+E  DGKVVF  W ETDFRTG++PWW
Sbjct:  114 RAGRRAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 259 bits (661), Expect = 3.820e-80
Identity = 115/173 (66.47%), Postives = 140/173 (80.92%), Query Frame = 1 
Query:  151 EEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            EE FVPDMDRR  +N IL G++G+NV GLA+PY+AFFVP         + AKDA+G++VT + WL+TH AG R L +G+KGDATYL+V EDK I++YG+ AVCTHLGCVVPWN AE+KFICPCHGSQYD TGKVVRGPAPLSLAL+H++E+DGKV+   W ETDFRT  +PWW
Sbjct:   64 EEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 257 bits (657), Expect = 5.570e-80
Identity = 125/182 (68.68%), Postives = 144/182 (79.12%), Query Frame = 1 
Query:  139 MSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXX-VVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTED----KKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            MSA++EA+VPDM RR A+NLIL    GV VLGLAIPY+A FVP          VVA+DA+G EVTSE WLATH  GSREL EG+KGDATYL+V +D    K I+D GIVAVCTH+GCVVPWNAAENKFICPCH SQYDA G+VVRGPAPLSLALSH++   GKV+ + W ETDFRTG++PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 245 bits (626), Expect = 3.470e-75
Identity = 131/223 (58.74%), Postives = 156/223 (69.96%), Query Frame = 1 
Query:    1 MYKTIALALVALVGADAFVSPVATSFSGSSVSRRSSAAKASTKAMRMSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            M++ I LA   L  A  + SP A + S      RS+ A        M+A+++ FVPDM+RRV +N +L GA  V  L LA  Y  FF P   XXXXX V A DA+G++VT E WLATH AG R+L EG+KGDATYL+VT DKKI+ Y + AVCTHLGCVVPWNAA+ KFICPCHGSQYD+TGKVVRGPAPLSLAL+H+    GKVV   W ETDFRTG +PWW
Sbjct:    1 MFRQILLAACTLAAASGYASPRAVAPS------RSALATTHRATPLMAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDFRTGLAPWW 217
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.240e-72
Identity = 104/173 (60.12%), Postives = 129/173 (74.57%), Query Frame = 1 
Query:  151 EEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            ++ F+PDM RR  +NL+L G +G+NV    +PY+ FFVP           A DA+G+E+ ++ WL TH  G R L +G+KGDATYL+VTE+  I+ YG+ AVCTHLGCVVPWN A NKFICPCHGSQYD+TGKVVRGPAPLSLAL+H+E  DGK+VF+ W E DFRTG  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A6H5J703_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J703_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 1.750e-72
Identity = 122/185 (65.95%), Postives = 149/185 (80.54%), Query Frame = 1 
Query:    1 MYKTIALA-LVALVGADAFVSPVATSFSGSSVSRR-SSAAKASTKAMRMSASEEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGK 549
            M+K IA A L+A  GADAFVSP  ++FSG   ++R S++A+ +TK +RM A+++ FVPDM+RR A+NLIL G++GV+V GLA+PYL+FFVP         V AKD+ GNEVT +SWLATHTAGSR+L EGIKGDATYL+VTEDKKIQDYGIVAVCTHLGC+VPW   ENKFICPCH S YD+TGK
Sbjct:    1 MFKIIAFAALMAPTGADAFVSPATSTFSGGITAQRISTSARPATKLVRMDANKDDFVPDMNRRTAMNLILAGSVGVSVFGLAVPYLSFFVPPSESGRGSRVTAKDSDGNEVTVKSWLATHTAGSRDLAEGIKGDATYLMVTEDKKIQDYGIVAVCTHLGCLVPWYEDENKFICPCHNSMYDSTGK 185
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BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 237 bits (604), Expect = 2.720e-72
Identity = 112/173 (64.74%), Postives = 135/173 (78.03%), Query Frame = 1 
Query:  157 AFVPDMDRRVAVNLIL--GGAIGVNVLGLAIPYLAFFVPXXXXXXXXXVVAKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEETDGKVVFKEWKETDFRTGDSPWW 669
            AFVPDM+RR  +NLIL  GG +  +V GLAIPY+ FF+P         + A    G+ +T ESWL+TH +GSREL +G+KGDATYLVV EDKKI+DYGI AVCTHLGCVVPWN + NKF+CPCHGSQYD +GKVVRGPAPLSLAL+HI +T+G + F +W ETDFRTG +PWW
Sbjct:   19 AFVPDMERRNIMNLILVFGGLVP-SVGGLAIPYVLFFIPRTSGKSEAGIPALTKSGDTITYESWLSTHASGSRELVQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGKVVRGPAPLSLALAHITDTNGVLTFSQWTETDFRTGLNPWW 190
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig109.830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI9.000e-12082.14Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A835YPA4_9STRA2.340e-8967.30Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A836CBH8_9STRA5.910e-8766.99Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A7S1U2M5_9STRA1.490e-8263.78Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
W7TXJ0_9STRA3.820e-8066.47Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A835ZDT9_9STRA5.570e-8068.68Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A8J5X155_DIALT3.470e-7558.74Rieske domain-containing protein n=3 Tax=Diacronem... [more]
A0A7S2V1Z6_9STRA1.240e-7260.12Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
A0A6H5J703_9PHAE1.750e-7265.95Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2D5MSC7_9BACT2.720e-7264.74Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig109contigF-serratus_M_contig109:694871..701989 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score356.7
Seed ortholog evalue8e-96
Seed eggNOG ortholog2880.D7FL45
Preferred namePETC
KEGG rclassRC01002
KEGG koko:K02636
KEGG ReactionR03817,R08409
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009512,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009941,GO:0009987,GO:0010196,GO:0015979,GO:0016020,GO:0016491,GO:0019684,GO:0022900,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046028,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055114,GO:0070069,GO:0071944,GO:0080167,GO:0098542,GO:1990066
EggNOG free text desc.oxidoreductase activity, acting on diphenols and related substances as donors
EggNOG OGsCOG0723@1,KOG1671@2759
Ec32 ortholog descriptionCytochrome b6-f complex iron-sulfur subunit
Ec32 orthologEc-05_006690.1
EC1.10.9.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Exons5
Model size1540
Cds size675
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig109.830.1prot_F-serratus_M_contig109.830.1Fucus serratus malepolypeptideF-serratus_M_contig109 694871..701124 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928945.7250054-CDS-F-serratus_M_contig109:694870..6949721622928945.7250054-CDS-F-serratus_M_contig109:694870..694972Fucus serratus maleCDSF-serratus_M_contig109 694871..694972 +
1690962639.8984098-CDS-F-serratus_M_contig109:694870..6949721690962639.8984098-CDS-F-serratus_M_contig109:694870..694972Fucus serratus maleCDSF-serratus_M_contig109 694871..694972 +
1622928945.743932-CDS-F-serratus_M_contig109:697885..6981731622928945.743932-CDS-F-serratus_M_contig109:697885..698173Fucus serratus maleCDSF-serratus_M_contig109 697886..698173 +
1690962639.909921-CDS-F-serratus_M_contig109:697885..6981731690962639.909921-CDS-F-serratus_M_contig109:697885..698173Fucus serratus maleCDSF-serratus_M_contig109 697886..698173 +
1622928945.760287-CDS-F-serratus_M_contig109:700102..7002611622928945.760287-CDS-F-serratus_M_contig109:700102..700261Fucus serratus maleCDSF-serratus_M_contig109 700103..700261 +
1690962639.925513-CDS-F-serratus_M_contig109:700102..7002611690962639.925513-CDS-F-serratus_M_contig109:700102..700261Fucus serratus maleCDSF-serratus_M_contig109 700103..700261 +
1622928945.775351-CDS-F-serratus_M_contig109:700689..7007691622928945.775351-CDS-F-serratus_M_contig109:700689..700769Fucus serratus maleCDSF-serratus_M_contig109 700690..700769 +
1690962639.9356296-CDS-F-serratus_M_contig109:700689..7007691690962639.9356296-CDS-F-serratus_M_contig109:700689..700769Fucus serratus maleCDSF-serratus_M_contig109 700690..700769 +
1622928945.7869987-CDS-F-serratus_M_contig109:701078..7011241622928945.7869987-CDS-F-serratus_M_contig109:701078..701124Fucus serratus maleCDSF-serratus_M_contig109 701079..701124 +
1690962639.9491758-CDS-F-serratus_M_contig109:701078..7011241690962639.9491758-CDS-F-serratus_M_contig109:701078..701124Fucus serratus maleCDSF-serratus_M_contig109 701079..701124 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928945.8029013-UTR-F-serratus_M_contig109:701124..7019891622928945.8029013-UTR-F-serratus_M_contig109:701124..701989Fucus serratus maleUTRF-serratus_M_contig109 701125..701989 +
1690962639.95898-UTR-F-serratus_M_contig109:701124..7019891690962639.95898-UTR-F-serratus_M_contig109:701124..701989Fucus serratus maleUTRF-serratus_M_contig109 701125..701989 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig109.830.1

>prot_F-serratus_M_contig109.830.1 ID=prot_F-serratus_M_contig109.830.1|Name=mRNA_F-serratus_M_contig109.830.1|organism=Fucus serratus male|type=polypeptide|length=225bp
MYKTIALALVALVGADAFVSPVATSFSGSSVSRRSSAAKASTKAMRMSAS
EEAFVPDMDRRVAVNLILGGAIGVNVLGLAIPYLAFFVPPGGGGSGGGVV
AKDAIGNEVTSESWLATHTAGSRELTEGIKGDATYLVVTEDKKIQDYGIV
AVCTHLGCVVPWNAAENKFICPCHGSQYDATGKVVRGPAPLSLALSHIEE
TDGKVVFKEWKETDFRTGDSPWWS*
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mRNA from alignment at F-serratus_M_contig109:694871..701989+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig109.830.1 ID=mRNA_F-serratus_M_contig109.830.1|Name=mRNA_F-serratus_M_contig109.830.1|organism=Fucus serratus male|type=mRNA|length=7119bp|location=Sequence derived from alignment at F-serratus_M_contig109:694871..701989+ (Fucus serratus male)
ATGTACAAGACCATCGCATTGGCCCTAGTGGCTCTTGTTGGTGCCGATGC
GTTTGTCTCGCCAGTGGCGACAAGTTTCTCGGGCAGCTCTGTTTCTCGAC
GGGTGAGAGCACTACTTTCACAAAGCCTCTAAGTTCCTGTCTTTCCACCC
ACGTTCATACAGCATCCTGGGCCGCAAAGCCTCAAAACCACGGGTCCGAG
GGCATTAGCCGCATGCTTCGCTGAAGATGCTTGTCCCCGCCTCTCCCTCA
TATTTGTTCTTGTCTTCGAATCATCTGTTGTAAACATTAGATACACTGGG
TGCAGAGCGGACTGCCCCGAGTAAAAGTGAAGCACCCTCCTAGTTGTGTA
TTTGTACTACTACTACTGTCTGTAGTACTGGAAATGATACACAAAAAATG
CTTTGGTGTGGATCGATAGTTATAACCTCGGTTTTGACCATTTTAAAATG
AGTCTCGGAGACTCAGCTCTTGTAGATGAATCCTCTTTGAGCGCCCAGCT
GACCAAGTTATCGTGATAGGCTTATCGCGCGCAGACATACACCGGTAGAA
TTACATCAGGTGTCGACTACTGCCCGGTTCACGATCGGGAGGGGCACTGC
TTTGCTCTCCTCTGTACATACACTTTCCTAATACTTCCACAGATCAAATT
CGAAATAAAAGCGAGAGCAGCTTATCATGACCCGGCCTCCCACAATGCGC
TCTGAGCTGGCGCATGCTAATAGAGCCGAAACGCACAACCGGATACGAGC
TGTGTTTTAACTTATTAAAAGAAAAATCCGTGTTGTGGTCGTGTCTGTGG
ACCATGCTCCTGAATGGCTTACGTACTCAACATCTCTACGGCCGTCTTTT
GGGTGGGGGAGAAGGAGCTAGGACCTTGCCTTTCATTGTACTGAATCCCT
TTAGACTATTAATAGACTACTACTGTATCAACGTAATTTACACCTGAAGT
GAACATTACGGTAGTATTACAAAACAGTATTACTGCTGTATACAAGTAGC
GTTCTTATTATATGAATAGTATAGTATAGTGTTCGAAGCTTACGTCATTA
TATCCGTCTTACGGGTCCCTGGGAATTATACTACTGTTGTGTACCCCATA
GGTCTAGAGCTAGCTATGAGTTCGAGTGCCTTGCGTCTTCTACTCATACC
GATCCTTAGCTATAGTGTAATCTAGTGTAATGTCGAGGCATCACGACCTA
TCTGCTGATGGTAGCTTCGGCCTAGATCTTTAATGTAATCAAATGTAATG
TCGAGGCATCACGGCCGATCTGCTGGTGTTTGCTTCGACCCAGATATAAA
ACAGTCAGTCGTATTTGGTATTCGATGCATGATGGGTCAGCGCAGGACAT
GATGCGTCTTCCGGACGCTATTACAGGATTAAGTTAATGGTCCATTCCAT
CCTAAATATTTTCATTCGTATTTTTGACTAAGCACTACATTCAATCAATC
CTGTCCATATGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAA
ATTCTCAGGCGCGAACGCGGACAGGGGAATATTCTTTTTCCTTGTTCAGC
TGACCACAAGCAGGATTGGCAACCTTACCAGGTTGATCCATACTCTTGCT
ATATGTGTGACCATACATATAGGACTTTCACCGTCAGGAAATATTTCTAG
TCCGGGAGTAGAGATACTAACTATACTATTAATACAGTTGTAGTACAATG
CAGAACTGATGTATGTAGCTCTCTACAGCATATAGCGAAGCGACATTTTC
TGGTGATAATGATTGGTTGATTTTACCACGTGGATCCTGCTGCTTGTCCC
TGTACGTACTGACTGCTGTGTGCGGTTCGAGGACCATGTGCAATTCAGAG
CAGATACCGGTCGCCCCGGTAGTTCAGTTGGTAATCTCGAAACCTTCTGT
CGTTGGGACGTGAGTTCGAATCTCGGTGCAGTCACACGAACTTGAATTTT
TGGTCACAAAAAGTAAAGAAATAAATTGTATAAAAAATCATGCCCAAGTG
GAGAACGATTAGTTCGTGGGTACACAAAATTCGACTCTACGGTCGACAAG
TGAAAAGGACGGCTGAACCCTTATCGCGATAAAAATCAAGGTACGCACCG
CAGAAGGAAGGTGGATGAGTAATCCTGTGCGACCTTCCTCCTGCGTGACC
GCGGGTGGTACGTCCACAAGTCTGACGTCCACTCACGTTCCAACGTCAGA
AGGTTTCGATGTTATCATTTGAACCACCGGGGCTACCGGTTGTTTACGAT
GCATGATCCCGTCGCATTCGAAATGACACTATTACGGCAGTTCCTTAGCT
CTCCACTCTCCACTACATGTACGCTCACTTTTCTGCGGCACACCCGGCGC
TCGGGTCTGTAGTGTATACTGGTATGTAGTAGGTCTACTACATGATGTCG
ATTTACAAAGAAATCTGAACGCATCTAAACCCTTTTGAGCATCCGCCCAA
TCAGGCAGCAGGGGGAAAGCATCATAGGCAGCAAAGACTAAATCTCTTAT
AATCGGGTTCCCGAATGAATTTTTAAGAAAAAATCAGAACGCGCCTATCA
TATACCTGTTACCTTCTGAGCATCCTCCAGTCAGAAGAACTGCTAAGAGA
GAAAGTTAAGAGAGAAAGTTTTTTGCGAACGTTCACCGATTCACCCGCGT
CTTTCTGTTTGCCATCCAAATGTCCCAAACTGCGGGCGTCGTCACTATAT
ACTAAACAGTATTACACTCGAAAAAAGAATATCCTGCTTTACTCTTCCAT
GACGCAAGTTACCCAAGTTACCCACGGGTATCCTTGACAATCGCACAGCC
TCCAGCTCATTTGGGCATTTGGTACACATAGCATTTATGTTCTTAGGAAT
ATGACTATGTGAAGATACAGGTAATAGTGCTCCTGGTTGAATAAAGGACT
GCATGATGCGAGCGAGAGACAACCGACGAAGCCACTTTTTTTCTGTTTTT
ATACCGCCCATAAACCGTACCGTTCTACCGTCTGTTCTCTGCCCCGTGAC
GTTGAACCTTGGCAGAGCTCGGCGGCTAAAGCCTCGACGAAAGCGATGCG
CATGTCCGCCTCCGAAGAGGCGTTCGTTCCGGACATGGACCGCCGCGTGG
CGGTGAACCTTATCCTTGGCGGCGCGATTGGCGTGAACGTCCTCGGGCTG
GCCATCCCTTACTTGGCGTTCTTTGTGCCACCGGGGGGCGGAGGTTCCGG
CGGGGGTGTCGTGGCCAAGGACGCTATTGGTAACGAGGTCACCTCAGAGA
GCTGGTTGGCCACCCATACCGCTGGATCTAGGGAGCTCACCGAGGGCATC
AAGGTGTGCGACTTGGGCGAACAGCCCGCTCGTCCAGCATGAGATGAAAC
GGAAGCAGCTGTGATTGATTATCCCATGTGTGGTTTTCCATTTATACAGG
CGTTCGTGGAATAACGCGTCGGGTTTGTGTCTGGCTTCGAGGGCTTCCCC
TCCAGTCTTAGATCTCAGATTTGGTGTGAGTATCATGGGGGTCGTAAGCC
ATAACAACTAGCACTAATGACGAGGGAACTGAAGAAATAGGTATCTGGGG
GCAACAGTCACCCGATGCGCGCGCTTTTGACTTCACAGTACAGTAAATGA
CAAATCTTATTACACAAGCGAGGACATGTATTTACTGCTTGGAGAGCCAT
GAGTTCAAGTTCGACGCCTCCTTAGAATATTTTTGGTGTGAATATCATGG
GGGTCGTAAGCCATAACAATCAACCCTAATAACGATGGAACTGACGAAAT
AGGTATCTAGGAGCAACAGTCACCCGATGCGCGCGCTTTTGACTACACAG
TACAGGAAATGACAAATCTTATTAGACAAGCGAGGACATTTATATACTGC
TTGGAGAGCCATGAGTTCAAGTTTGACAGCTCCGTTATCAATATCAAATT
CTCTGAAGAAATTCTTGAGAGGCTTATCTTGGTTTGTTAAAAGCCGAAGT
TTGTGGCAAAACTTCAGCTCGACCTGGCGATGAAAAATGAAAACTTTGAA
TAAGTATGTTTTTTCATGATGATGATGTTGATGATGACCACTCACGAGTC
AAGTGAACTCTTACGTCCCGCATTTGAATGAACACCTCTTCATAGACCTA
GTAATAGTAATAGCAACTGACTAGTATGTTAATTTTATCTGACTAGCATG
ACGCTAACCTTAACTCGAAGCCATGAAGCGTTTTTTCTTAACTCATTTCT
TGGTTTCTTGCAGATATAGAAGTATTAATACTATCAATACTAAAACAACT
GTAGTGGGGGTGGTCACGAGAGCACTTACTTCGTGTTTCCCTTACCTCAG
CCTTACCCCAGCCGTCAACAGACACGAGCGACTTGTGCTCCTGGGCTCTG
TTGAAGTCGTAGAACAGTGACAGTTCTCAGAAACGAACATCTTTTTATTG
TTCACGAACTTTTTCTGCCATTCTGCCGCTCGGAGGAACCGCCATAGAAG
AAAAAAAAAAGCGACAAACCACTGCGACgGGGGGGGAGGGAGGATCACAC
GCTAAAAAAAAACACGCCAGTTTAGACATAGCCGTGGAGCGGTTTAATAT
TAAAAACAGTAGATACTTTCTCCCGTCTCTGCTGCCAACCTTGCCACCGA
CATTTGTTATGATTTTTGGATATTCCGATTGATTCTGGAACTATGACTTT
CCATCCGATCATCCCGTCTAGTTCCGTTGTTCTTACTTTTTCCCGGCCTG
GGAATTTTCCGGGTTTTCCGGTGCCGGCGGGGTGTACTTGTACATGAGAA
AAAACTGCATCTCGTTGTTGCTTGTGTTTAAATTTTAAGAGCATCTCATG
CAAAGAAATTAAAACAGCTTTTGGGGAGACCCAAGCCATTCGGTCTCCCG
CACCGCCTCTTGACCGAAAGACAATCGTAATCGCTCGGAGCAAGACAGAC
ATGCATTGTGTATGTTTACCGCACCAAGTCCTACTTCTGCCCCTGAACAC
TTGAGGGGGGAAATACCCTTGGTATGAGAGATCATTGTGCACCGCAAAAC
TCCACGTGTGCTGTGATAGTAGCTCTAGGGTATCAAGAACCCACTTTTCT
CTGGCGTCTCAATCTCGGCTCTCCCGAATGGATAGTTTTATCATTGCGTG
TATAGGTACGTTCCACAGAAAATGGCTTTGAGATGGACGCGAAGGCACCA
CTTTTTTTTGTCAGGTTCCCTGCTCTCCGTTTTGTTTATGCAACGGGACG
TGACTCACGTGTGTGTATTGTATATTCTTTAGGGTGACGCTACCTACCTG
GTGGTGACGGAGGACAAGAAGATTCAGGACTACGGCATCGTGGCCGTCTG
CACGCACCTGGGCTGTGTCGTGCCGTGGAACGCAGCGGAGAACAAGTTCA
TCTGCCCTTGCCACGGCTCTCAATACGACGCCACCGGAAAGGTACTCTTA
CACACCACAATTGTACCTTTTTCGCAACAATGTACCTTTTATCGAGAAGT
GTACCCTTCATAATGCAGGGGTACCTTTTGTCTTTGTTTTCTCTTTCTCC
AATCCTTAGCCCTCGACCCACTTGTGTTTGTAACTATCCGAGCCTTCTCA
AAAATAAAAGGAGAACGTGACCATAACGTTTTCAGACGCCGTTGATGATC
TTGTAACTGCGTCGAAGGCGAGCGACACGCGTCGACCGAAAAGTCTATCC
AAGTTTTTACGACACATGGCACGCACCATTTTGCTCCGTGAGGATGGTGG
GTTTTTTTCGTTCATGCTTTGAAAGGCATCGGTCATCTCCCGGGTGTCCT
CCGACAAAAAACGTTCAAATTATTTTGCTTTCTGCCGTTGCAATGTTATG
TTATGCTATGTCCCCTCAGGTGGTGAGAGGTCCGGCACCCCTCTCCTTAG
CTCTCTCGCACATCGAGGAGACCGACGGCAAGGTTGTCTTCAAGGAGTGG
TACGTGATTCATCATGACATCATCAATCTCAACGTATCGGTAGGATTGAC
GAGCGATACCGATTGTTGCTGCCCGTGGTTGTTGCGTGTTTTGTTTTTTT
CCTTACGGTATTCAACTTTTGAAAGGTGCGGGCGTATTGGCGGAGTAGGG
GACCCGATACCCGCGGTCCTATGCATGCACGCCTACTTACGAAGCACGCG
GATATATTACAGTGCCGCTATGTGGCTGACCTGATCCGTGTTCGCGTTTC
CCCCCCCCACCCCTCCGTTTGCCGGGGGCTGTCTACCCTTCCCCCTTTGT
CCTCACAGGAAGGAGACAGATTTCCGGACCGGAGATTCTCCATGGTGGTC
GTAGAGCTTCAACGCGTGATCCAATCGATGCACATGTTGTTAAAAGGCTT
CGGGTGTTATTTTTAGGCTGGGATGTGGAGGCTCACCCGGGAAAACTGTA
GCGTCAGTGGAGGGGTGCGTTGCATTGTCAGCCATCGATTGATCCGCCAT
CACTTTCCCGAGGTTACCTGTTGGTTTTGTGCGGGGCAGGTATGACTTTT
AAGTGGGCGTTGTCTGTCGCTGTGGCTGCAGTCCACGCGTTGATCATGTG
AGCACCCGTCCTAGGTTTCCTGGCAGGCGGATTCGAATCCTGCGGTACTG
CCTGAAGAGGGTGGGTTTTTTAAGAGACGGAATGATTAGACCTCAAACAA
CATTGAGCGTTTTTTGTTCTTGTTCTGCGGCAAGACAGCGGGGTAAGCTA
TCAATAGCCACCCTCTTCGAGAAAATGTTCTTCCATCGCTTAAAAGGCAC
CGCAGTTCCACCACCATTCACCGGTATACGTTTTTATACTCATGACAAGC
AATGCTTGCTATTAATAGAGGGATTGCTCGACATTTCTATGATAGGTCTT
AGGTTTGGAACGGTGTAGATAACTTTTAACGGCTTGAGTGGTTCTGTTTG
TGAAGGCAGCACAAAAGAGCCGTCCCACGGAGGGATCACCCCCTGCTTGT
GCCATCGACACGCACTCTACGATCCCAGCAGGGTCCACCTTATCTCAACA
GGGATGGAAGCTCCTGGTACTAGTTTCGAGCTAAACGAAAGCAAGCCAAG
AATTTCCGTCGAATCTTCCTGCGACAAAAGCTGGTCAAAAGGGCGTTTGC
AAGCGGGAATTCCTTGACCGATTTGCGTCGCGACATTTCCACGGAAAAAA
TATACGGAAATCTTCCCCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig109:694871..701989+

>mRNA_F-serratus_M_contig109.830.1 ID=mRNA_F-serratus_M_contig109.830.1|Name=mRNA_F-serratus_M_contig109.830.1|organism=Fucus serratus male|type=CDS|length=1350bp|location=Sequence derived from alignment at F-serratus_M_contig109:694871..701989+ (Fucus serratus male)
ATGTACAAGACCATCGCATTGGCCCTAGTGGCTCTTGTTGGTGCCGATGC
GTTTGTCTCGCCAGTGGCGACAAGTTTCTCGGGCAGCTCTGTTTCTCGAC
GGATGTACAAGACCATCGCATTGGCCCTAGTGGCTCTTGTTGGTGCCGAT
GCGTTTGTCTCGCCAGTGGCGACAAGTTTCTCGGGCAGCTCTGTTTCTCG
ACGGAGCTCGGCGGCTAAAGCCTCGACGAAAGCGATGCGCATGTCCGCCT
CCGAAGAGGCGTTCGTTCCGGACATGGACCGCCGCGTGGCGGTGAACCTT
ATCCTTGGCGGCGCGATTGGCGTGAACGTCCTCGGGCTGGCCATCCCTTA
CTTGGCGTTCTTTGTGCCACCGGGGGGCGGAGGTTCCGGCGGGGGTGTCG
TGGCCAAGGACGCTATTGGTAACGAGGTCACCTCAGAGAGCTGGTTGGCC
ACCCATACCGCTGGATCTAGGGAGCTCACCGAGGGCATCAAGAGCTCGGC
GGCTAAAGCCTCGACGAAAGCGATGCGCATGTCCGCCTCCGAAGAGGCGT
TCGTTCCGGACATGGACCGCCGCGTGGCGGTGAACCTTATCCTTGGCGGC
GCGATTGGCGTGAACGTCCTCGGGCTGGCCATCCCTTACTTGGCGTTCTT
TGTGCCACCGGGGGGCGGAGGTTCCGGCGGGGGTGTCGTGGCCAAGGACG
CTATTGGTAACGAGGTCACCTCAGAGAGCTGGTTGGCCACCCATACCGCT
GGATCTAGGGAGCTCACCGAGGGCATCAAGGGTGACGCTACCTACCTGGT
GGTGACGGAGGACAAGAAGATTCAGGACTACGGCATCGTGGCCGTCTGCA
CGCACCTGGGCTGTGTCGTGCCGTGGAACGCAGCGGAGAACAAGTTCATC
TGCCCTTGCCACGGCTCTCAATACGACGCCACCGGAAAGGGTGACGCTAC
CTACCTGGTGGTGACGGAGGACAAGAAGATTCAGGACTACGGCATCGTGG
CCGTCTGCACGCACCTGGGCTGTGTCGTGCCGTGGAACGCAGCGGAGAAC
AAGTTCATCTGCCCTTGCCACGGCTCTCAATACGACGCCACCGGAAAGGT
GGTGAGAGGTCCGGCACCCCTCTCCTTAGCTCTCTCGCACATCGAGGAGA
CCGACGGCAAGGTTGTCTTCAAGGAGTGGTGGTGAGAGGTCCGGCACCCC
TCTCCTTAGCTCTCTCGCACATCGAGGAGACCGACGGCAAGGTTGTCTTC
AAGGAGTGGAAGGAGACAGATTTCCGGACCGGAGATTCTCCATGGTGGTC
GTAGGAAGGAGACAGATTTCCGGACCGGAGATTCTCCATGGTGGTCGTAG
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