mRNA_F-serratus_M_contig1086.798.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1086.798.1
Unique NamemRNA_F-serratus_M_contig1086.798.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: D8LBY7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY7_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 3.510e-172
Identity = 263/285 (92.28%), Postives = 273/285 (95.79%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFDIS+LEISGGVFEVKSTNGDT+LGGEDFDE+LLKHLL EFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADS+GPKHMNVKV+R+ FENLVDGLIERAIKPCK+C+RDAGLET +VHEVLLVGGMTRMPKVQ+KVEAFFGKPPSRGVNPDEVVAMGAAIQ  G   GSVKDILLLDVTPLSLGIETLGGV TKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPA RGVPQIEVSFDIDAD  L
Sbjct:  241 GGTFDISILEISGGVFEVKSTNGDTMLGGEDFDEVLLKHLLSEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSSGPKHMNVKVTRAEFENLVDGLIERAIKPCKDCMRDAGLETDEVHEVLLVGGMTRMPKVQSKVEAFFGKPPSRGVNPDEVVAMGAAIQG-GVLRGSVKDILLLDVTPLSLGIETLGGVMTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAQRGVPQIEVSFDIDADGIL 524
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A836C7W0_9STRA (Heat shock protein 70 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W0_9STRA)

HSP 1 Score: 477 bits (1228), Expect = 5.660e-159
Identity = 243/285 (85.26%), Postives = 260/285 (91.23%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFDIS+LEISGGVFEVKSTNGDTLLGGEDFDE LLK+L+  FRKESGI+L+GD LAMQRLREAAEKAKRELDG+P TDVSLPFITADS+GPKHMN+KV+R+ FENLVD LIERAI PCKNC+RDA L+ SD+HEVLLVGGMTRMPKVQ +V+AFFGK PSRGVNPDEVVAMGAAIQ  G   G VKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQ FSTAADNQSQVQIK LQGEREMA DNK LG+FDLVGIPPA RGVPQIEV+FDIDAD  L
Sbjct:  180 GGTFDISILEISGGVFEVKSTNGDTLLGGEDFDEALLKYLVDTFRKESGINLAGDRLAMQRLREAAEKAKRELDGLPMTDVSLPFITADSSGPKHMNIKVTRATFENLVDDLIERAITPCKNCMRDASLDKSDIHEVLLVGGMTRMPKVQERVQAFFGKQPSRGVNPDEVVAMGAAIQG-GVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKVLQGEREMAADNKSLGEFDLVGIPPAPRGVPQIEVAFDIDADGIL 463
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A7S2V2X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2X3_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 6.700e-157
Identity = 234/282 (82.98%), Postives = 255/282 (90.43%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDAD 1567
            GGTFDIS+LEISGGVFEVKSTNGDTLLGGEDFDE LLKHL+ EFRKESGIDLS D LAMQR+REAAEKAKRELDG+PQTDVSLPFITAD TGPKHMNVK++R+ FENLVD LIER + PC+NC++DAG++  +V E+LLVGGM+RMPKVQ KVE FFG+ PS+GVNPDEVVAMGAAIQ  G  +G VKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKK Q FSTAADNQ QVQIK LQGEREMA DNK+LG FDLVGIPPA RGVPQIEV+FDIDAD
Sbjct:  151 GGTFDISILEISGGVFEVKSTNGDTLLGGEDFDEHLLKHLIKEFRKESGIDLSNDPLAMQRVREAAEKAKRELDGLPQTDVSLPFITADQTGPKHMNVKITRAQFENLVDDLIERTMDPCRNCLKDAGIDKKEVSEILLVGGMSRMPKVQTKVEEFFGRKPSKGVNPDEVVAMGAAIQG-GVLKGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKGQVFSTAADNQPQVQIKVLQGEREMAADNKLLGNFDLVGIPPAPRGVPQIEVTFDIDAD 431
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A6U1P0W5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1P0W5_CYCTE)

HSP 1 Score: 454 bits (1168), Expect = 8.150e-151
Identity = 229/285 (80.35%), Postives = 253/285 (88.77%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFD+S+LEISGGVFEVK+TNGDT+LGGEDFDE+LL HLL +F+KESGIDL GD LAMQRLREAAEKAKRELDG+ QTDVSLPFITAD++GPKHMNVKVS++ FE+LV  L++R I+PCK C++DA +  S++HEV+LVGGMTRMPKVQ  VE FFGK PSRGVNPDEVVAMGAAIQ  G  +G VKDILLLDVTPLSLGIETLGGV TKLI RNTTIPTKK QTFSTAADNQ QVQIK +QGEREMA DNK LGQFDLVGIPPA RGVPQIEVSFDIDAD  L
Sbjct:  118 GGTFDVSILEISGGVFEVKATNGDTMLGGEDFDEVLLGHLLNDFKKESGIDLGGDKLAMQRLREAAEKAKRELDGLAQTDVSLPFITADASGPKHMNVKVSKAQFESLVQALVDRTIEPCKKCMKDADISKSEIHEVILVGGMTRMPKVQDTVEEFFGKKPSRGVNPDEVVAMGAAIQG-GVLKGDVKDILLLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKQQTFSTAADNQPQVQIKVMQGEREMAVDNKTLGQFDLVGIPPAPRGVPQIEVSFDIDADGIL 401
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A7S3LH83_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH83_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 1.060e-149
Identity = 229/285 (80.35%), Postives = 254/285 (89.12%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFD+SVLEI GGVFEVK+TNGDT+LGGEDFDE LL+++L EF+K+SG+DLSGD LAMQRLREAAEKAKRELDG+ QTDVSLPFITAD++GPKHMN+K+SRS FEN+V  L++R + PCKNCI+DA +  SD+HEV+LVGGMTRMPKVQ  V+ FFGK PSRGVNPDEVVAMGAAIQ  G  +G VKDILLLDVTPLSLGIETLGGV TKLI RNTTIPTKK QTFSTAADNQ QVQIK +QGEREMA DNKMLGQFDLVGIPPA RGVPQIEVSFDIDAD  L
Sbjct:  234 GGTFDVSVLEIQGGVFEVKATNGDTMLGGEDFDEELLEYMLAEFKKDSGMDLSGDKLAMQRLREAAEKAKRELDGLAQTDVSLPFITADASGPKHMNLKISRSQFENMVQKLVDRTLDPCKNCIKDADVSKSDIHEVILVGGMTRMPKVQDTVQQFFGKKPSRGVNPDEVVAMGAAIQG-GVLKGDVKDILLLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKQQTFSTAADNQPQVQIKVMQGEREMAADNKMLGQFDLVGIPPAPRGVPQIEVSFDIDADGIL 517
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A7S2RB30_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RB30_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 2.990e-149
Identity = 225/285 (78.95%), Postives = 254/285 (89.12%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFD+S+LEISGGVFEVK+TNGDT+LGGEDFDE LL+HLL EF+K+SGIDLSGD LAMQRLREAAEKAKRELDG+ QTDVSLPFITADSTGPKH+N+K++R++FE++V+ L+ R + PCK C++DA +  S++HEV+LVGGMTRMPKVQ  VE FF K PSRGVNPDEVVAMGAAIQ  G  +G VKDILLLDVTPLSLGIETLGGV TKLI RNTTIPTKK Q FSTAADNQ QVQIKALQGEREMA DNK+LGQFDLVG+PPA RGVPQIEVSFD+DAD  L
Sbjct:  197 GGTFDVSILEISGGVFEVKATNGDTMLGGEDFDEELLRHLLQEFKKDSGIDLSGDNLAMQRLREAAEKAKRELDGLAQTDVSLPFITADSTGPKHLNIKITRASFESMVERLVTRTVDPCKKCVKDADISKSEIHEVILVGGMTRMPKVQETVEKFFNKKPSRGVNPDEVVAMGAAIQG-GVLKGDVKDILLLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKSQVFSTAADNQPQVQIKALQGEREMAVDNKLLGQFDLVGLPPAPRGVPQIEVSFDLDADGIL 480
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: B7FPY8_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPY8_PHATC)

HSP 1 Score: 452 bits (1164), Expect = 1.260e-148
Identity = 228/285 (80.00%), Postives = 254/285 (89.12%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFD+SVLEI GGVFEVK+TNGDT+LGGEDFDE LL++LL +F+K+SGIDL GD LAMQRLREAAEKAKRELDG+ QTDVSLPFITAD++GPKHMNVK+SRS FEN+V  L++R I PCK+C++DA ++ S++HEV+LVGGMTRMPKVQ+ VE FFGK PSRGVNPDEVVAMGAAIQ  G  +G VKDILLLDVTPLSLGIETLGGV TKLI RNTTIPTKK QTFSTAADNQ QVQIK LQGEREMA DNKMLG FD+VGIPPA RGVPQIEVSFDIDAD  L
Sbjct:  234 GGTFDVSVLEIQGGVFEVKATNGDTMLGGEDFDEELLEYLLAQFKKDSGIDLGGDKLAMQRLREAAEKAKRELDGLAQTDVSLPFITADASGPKHMNVKISRSQFENMVQKLVDRTIGPCKSCMKDADIKKSEIHEVILVGGMTRMPKVQSTVEEFFGKKPSRGVNPDEVVAMGAAIQG-GVLKGDVKDILLLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKQQTFSTAADNQPQVQIKVLQGEREMAADNKMLGNFDMVGIPPAPRGVPQIEVSFDIDADGIL 517
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A662Y298_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y298_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 1.590e-148
Identity = 223/282 (79.08%), Postives = 252/282 (89.36%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDAD 1567
            GGTFD+S+LEISGGVFEVKSTNGDTLLGGEDFDE LL++L+ EF+KES IDLSGD LAMQRLREAAEKAKRELDG+ QTD+SLPFITAD+TGPKH+N+K++R+ FE LV  LIER + PCK C++DAG+E S+++EV+LVGGM+RMPKVQ  VE FFGK PS+GVNPDEVVAMGAAIQ  G   G VKDILLLDVTPLSLGIETLGGVFTKLI RNTTIPTKK Q FSTAAD+Q+QV IK LQGEREMA+DNK+LG FDLVGIPPA RGVPQIEVSFDIDA+
Sbjct:   22 GGTFDVSILEISGGVFEVKSTNGDTLLGGEDFDEELLRYLVNEFKKESSIDLSGDNLAMQRLREAAEKAKRELDGLAQTDISLPFITADATGPKHLNMKITRATFEKLVGHLIERTMGPCKKCVKDAGVEKSEINEVILVGGMSRMPKVQTSVEDFFGKKPSKGVNPDEVVAMGAAIQG-GVLRGDVKDILLLDVTPLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADSQTQVGIKVLQGEREMASDNKLLGNFDLVGIPPAPRGVPQIEVSFDIDAN 302
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: W7U263_9STRA (Heat shock protein 70 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U263_9STRA)

HSP 1 Score: 452 bits (1163), Expect = 2.560e-148
Identity = 225/282 (79.79%), Postives = 253/282 (89.72%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDAD 1567
            GGTFD+S+LEISGGVFEVK+TNGDT+LGGEDFDE LLKHL  EFRK+SGIDLS D LAMQRLREAAEKAKRELDG+ QT+VSLPFITAD TGPKH+NVKVSR+ FE LVD L++R I+PCKNC++DA +E  D++EVLLVGGMTRMPKVQ+ VE FFG+ PS+GVNPDEVVAMGAAIQ  G   G VKD+LLLDVTPLSLGIETLGG+FT+LINRNTTIPTKK Q FSTAADNQSQVQIK LQGERE+A DNK+LG FDLVGIPPA RG+PQI+V+FDIDAD
Sbjct:  239 GGTFDVSILEISGGVFEVKATNGDTMLGGEDFDEELLKHLAAEFRKDSGIDLSKDRLAMQRLREAAEKAKRELDGLAQTEVSLPFITADQTGPKHLNVKVSRAQFEKLVDSLVQRTIQPCKNCLKDASVEKKDINEVLLVGGMTRMPKVQSVVEDFFGRKPSKGVNPDEVVAMGAAIQG-GVLRGDVKDVLLLDVTPLSLGIETLGGMFTRLINRNTTIPTKKGQVFSTAADNQSQVQIKVLQGERELAADNKLLGSFDLVGIPPAPRGLPQIDVTFDIDAD 519
[Close]
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Match: A0A7S2STT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT0_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 5.620e-148
Identity = 220/285 (77.19%), Postives = 253/285 (88.77%), Query Frame = 2 
Query:  722 GGTFDISVLEISGGVFEVKSTNGDTLLGGEDFDELLLKHLLGEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENLVDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQFDLVGIPPAARGVPQIEVSFDIDADADL 1576
            GGTFD+S+LEISGGVFEVK+TNGDTLLGGEDFDE LL HL+ EF+K+SG+D+SGD LAMQR+REAAEKAKRELDG+ QT+VSLPFITAD++GPKHMNVK++++ FE +VD L++R + PC+ C++DAGL T D+HEV+LVGGMTRMPKVQ +V+ FFGK PSRGVNPDEVVAMGAAIQ  G   G VKD+LLLDVTPLSLGIETLGGVFT L++RNTTIPTKK Q FSTA D+QSQVQIK LQGER+MA DNK LGQFDLVGIPPA RGVPQIEVSFDIDAD  L
Sbjct:  251 GGTFDVSILEISGGVFEVKATNGDTLLGGEDFDEALLSHLVAEFKKDSGMDVSGDRLAMQRMREAAEKAKRELDGLNQTEVSLPFITADASGPKHMNVKITKAQFEGIVDDLVQRTMSPCEKCVKDAGLSTKDIHEVILVGGMTRMPKVQERVQDFFGKEPSRGVNPDEVVAMGAAIQG-GVLRGDVKDVLLLDVTPLSLGIETLGGVFTPLVSRNTTIPTKKDQVFSTAQDSQSQVQIKVLQGERKMAADNKALGQFDLVGIPPAPRGVPQIEVSFDIDADGIL 534
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1086.798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBY7_ECTSI3.510e-17292.28Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836C7W0_9STRA5.660e-15985.26Heat shock protein 70 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2V2X3_9STRA6.700e-15782.98Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U1P0W5_CYCTE8.150e-15180.35Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3LH83_9STRA1.060e-14980.35Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2RB30_9STRA2.990e-14978.95Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B7FPY8_PHATC1.260e-14880.00Predicted protein n=4 Tax=Phaeodactylum tricornutu... [more]
A0A662Y298_9STRA1.590e-14879.08Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
W7U263_9STRA2.560e-14879.79Heat shock protein 70 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S2STT0_9STRA5.620e-14877.19Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1086contigF-serratus_M_contig1086:157795..169817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.9e-95
Seed eggNOG ortholog2850.Phatr17633
Preferred nameSDH3-1
KEGG rclassRC00045
KEGG koko:K00236,ko:K04043
KEGG TC1.A.33.1
KEGG ReactionR02164
KEGG Pathwayko00020,ko00190,ko01100,ko01110,ko01120,ko01130,ko01200,ko03018,ko04212,ko04714,ko04932,ko05010,ko05012,ko05016,ko05152,map00020,map00190,map01100,map01110,map01120,map01130,map01200,map03018,map04212,map04714,map04932,map05010,map05012,map05016,map05152
KEGG ModuleM00009,M00011,M00148
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006970,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030312,GO:0030554,GO:0031090,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045273,GO:0046686,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070469,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0098588,GO:0098796,GO:0098803,GO:0098805,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141
EggNOG free text desc.heat shock
EggNOG OGs2XAKJ@2836,COG0443@1,KOG0102@2759
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03029,ko03110,ko04147
Exons14
Model size1757
Cds size702
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1086.798.1prot_F-serratus_M_contig1086.798.1Fucus serratus malepolypeptideF-serratus_M_contig1086 165789..168878 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928937.0137472-UTR-F-serratus_M_contig1086:157794..1578301622928937.0137472-UTR-F-serratus_M_contig1086:157794..157830Fucus serratus maleUTRF-serratus_M_contig1086 157795..157830 +
1690962636.7270288-UTR-F-serratus_M_contig1086:157794..1578301690962636.7270288-UTR-F-serratus_M_contig1086:157794..157830Fucus serratus maleUTRF-serratus_M_contig1086 157795..157830 +
1622928937.0323362-UTR-F-serratus_M_contig1086:158623..1588501622928937.0323362-UTR-F-serratus_M_contig1086:158623..158850Fucus serratus maleUTRF-serratus_M_contig1086 158624..158850 +
1690962636.7376764-UTR-F-serratus_M_contig1086:158623..1588501690962636.7376764-UTR-F-serratus_M_contig1086:158623..158850Fucus serratus maleUTRF-serratus_M_contig1086 158624..158850 +
1622928937.0476015-UTR-F-serratus_M_contig1086:160981..1610861622928937.0476015-UTR-F-serratus_M_contig1086:160981..161086Fucus serratus maleUTRF-serratus_M_contig1086 160982..161086 +
1690962636.7472744-UTR-F-serratus_M_contig1086:160981..1610861690962636.7472744-UTR-F-serratus_M_contig1086:160981..161086Fucus serratus maleUTRF-serratus_M_contig1086 160982..161086 +
1622928937.059502-UTR-F-serratus_M_contig1086:161607..1617151622928937.059502-UTR-F-serratus_M_contig1086:161607..161715Fucus serratus maleUTRF-serratus_M_contig1086 161608..161715 +
1690962636.755371-UTR-F-serratus_M_contig1086:161607..1617151690962636.755371-UTR-F-serratus_M_contig1086:161607..161715Fucus serratus maleUTRF-serratus_M_contig1086 161608..161715 +
1622928937.0710225-UTR-F-serratus_M_contig1086:162148..1622921622928937.0710225-UTR-F-serratus_M_contig1086:162148..162292Fucus serratus maleUTRF-serratus_M_contig1086 162149..162292 +
1690962636.763597-UTR-F-serratus_M_contig1086:162148..1622921690962636.763597-UTR-F-serratus_M_contig1086:162148..162292Fucus serratus maleUTRF-serratus_M_contig1086 162149..162292 +
1622928937.082918-UTR-F-serratus_M_contig1086:163269..1634051622928937.082918-UTR-F-serratus_M_contig1086:163269..163405Fucus serratus maleUTRF-serratus_M_contig1086 163270..163405 +
1690962636.7722228-UTR-F-serratus_M_contig1086:163269..1634051690962636.7722228-UTR-F-serratus_M_contig1086:163269..163405Fucus serratus maleUTRF-serratus_M_contig1086 163270..163405 +
1622928937.0993772-UTR-F-serratus_M_contig1086:164288..1643671622928937.0993772-UTR-F-serratus_M_contig1086:164288..164367Fucus serratus maleUTRF-serratus_M_contig1086 164289..164367 +
1690962636.7834013-UTR-F-serratus_M_contig1086:164288..1643671690962636.7834013-UTR-F-serratus_M_contig1086:164288..164367Fucus serratus maleUTRF-serratus_M_contig1086 164289..164367 +
1622928937.2077742-UTR-F-serratus_M_contig1086:165728..1657881622928937.2077742-UTR-F-serratus_M_contig1086:165728..165788Fucus serratus maleUTRF-serratus_M_contig1086 165729..165788 +
1690962636.793695-UTR-F-serratus_M_contig1086:165728..1657881690962636.793695-UTR-F-serratus_M_contig1086:165728..165788Fucus serratus maleUTRF-serratus_M_contig1086 165729..165788 +
1622928937.2988136-UTR-F-serratus_M_contig1086:168878..1689331622928937.2988136-UTR-F-serratus_M_contig1086:168878..168933Fucus serratus maleUTRF-serratus_M_contig1086 168879..168933 +
1690962636.854138-UTR-F-serratus_M_contig1086:168878..1689331690962636.854138-UTR-F-serratus_M_contig1086:168878..168933Fucus serratus maleUTRF-serratus_M_contig1086 168879..168933 +
1622928937.3165576-UTR-F-serratus_M_contig1086:169712..1698171622928937.3165576-UTR-F-serratus_M_contig1086:169712..169817Fucus serratus maleUTRF-serratus_M_contig1086 169713..169817 +
1690962636.8627436-UTR-F-serratus_M_contig1086:169712..1698171690962636.8627436-UTR-F-serratus_M_contig1086:169712..169817Fucus serratus maleUTRF-serratus_M_contig1086 169713..169817 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928937.2220218-CDS-F-serratus_M_contig1086:165788..1658181622928937.2220218-CDS-F-serratus_M_contig1086:165788..165818Fucus serratus maleCDSF-serratus_M_contig1086 165789..165818 +
1690962636.8024044-CDS-F-serratus_M_contig1086:165788..1658181690962636.8024044-CDS-F-serratus_M_contig1086:165788..165818Fucus serratus maleCDSF-serratus_M_contig1086 165789..165818 +
1622928937.2339635-CDS-F-serratus_M_contig1086:166410..1665921622928937.2339635-CDS-F-serratus_M_contig1086:166410..166592Fucus serratus maleCDSF-serratus_M_contig1086 166411..166592 +
1690962636.810672-CDS-F-serratus_M_contig1086:166410..1665921690962636.810672-CDS-F-serratus_M_contig1086:166410..166592Fucus serratus maleCDSF-serratus_M_contig1086 166411..166592 +
1622928937.245632-CDS-F-serratus_M_contig1086:167069..1672221622928937.245632-CDS-F-serratus_M_contig1086:167069..167222Fucus serratus maleCDSF-serratus_M_contig1086 167070..167222 +
1690962636.8187869-CDS-F-serratus_M_contig1086:167069..1672221690962636.8187869-CDS-F-serratus_M_contig1086:167069..167222Fucus serratus maleCDSF-serratus_M_contig1086 167070..167222 +
1622928937.2585135-CDS-F-serratus_M_contig1086:167863..1679991622928937.2585135-CDS-F-serratus_M_contig1086:167863..167999Fucus serratus maleCDSF-serratus_M_contig1086 167864..167999 +
1690962636.8270617-CDS-F-serratus_M_contig1086:167863..1679991690962636.8270617-CDS-F-serratus_M_contig1086:167863..167999Fucus serratus maleCDSF-serratus_M_contig1086 167864..167999 +
1622928937.2692332-CDS-F-serratus_M_contig1086:168407..1685351622928937.2692332-CDS-F-serratus_M_contig1086:168407..168535Fucus serratus maleCDSF-serratus_M_contig1086 168408..168535 +
1690962636.8363335-CDS-F-serratus_M_contig1086:168407..1685351690962636.8363335-CDS-F-serratus_M_contig1086:168407..168535Fucus serratus maleCDSF-serratus_M_contig1086 168408..168535 +
1622928937.284112-CDS-F-serratus_M_contig1086:168805..1688781622928937.284112-CDS-F-serratus_M_contig1086:168805..168878Fucus serratus maleCDSF-serratus_M_contig1086 168806..168878 +
1690962636.8452225-CDS-F-serratus_M_contig1086:168805..1688781690962636.8452225-CDS-F-serratus_M_contig1086:168805..168878Fucus serratus maleCDSF-serratus_M_contig1086 168806..168878 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1086.798.1

>prot_F-serratus_M_contig1086.798.1 ID=prot_F-serratus_M_contig1086.798.1|Name=mRNA_F-serratus_M_contig1086.798.1|organism=Fucus serratus male|type=polypeptide|length=234bp
MQRLREAAEKAKRELDGMPQTDVSLPFITADSTGPKHMNVKVSRSAFENL
VDGLIERAIKPCKNCIRDAGLETSDVHEVLLVGGMTRMPKVQAKVEAFFG
KPPSRGVNPDEVVAMGAAIQVPGSAEGSVKDILLLDVTPLSLGIETLGGV
FTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKMLGQF
DLVGIPPAARGVPQIEVSFDIDADADLARWCQG*
back to top

mRNA from alignment at F-serratus_M_contig1086:157795..169817+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1086.798.1 ID=mRNA_F-serratus_M_contig1086.798.1|Name=mRNA_F-serratus_M_contig1086.798.1|organism=Fucus serratus male|type=mRNA|length=12023bp|location=Sequence derived from alignment at F-serratus_M_contig1086:157795..169817+ (Fucus serratus male)
ATGCTGGGGTCTCGATTGGCAAGTTCGATCGCAAAGGTGAGATCAACCCG
ACCTTTGTCTGGGCGTGGATTTGCGTCCGTCAACGTTATGACCTTGAATT
TACTCGGCCGTTTGTTTGACCAGTGGTCTGGCGAGCCGTTTTGCTATGCA
GAGGGGCTCGCGTGCGCTGCCAGACTGTTTGGTAGCGCTAAGCGCGCTGT
GTCACTCGAGAAGCGGTTTTGAGTTCGGTTACCGTATCAAAGCCCAAAAC
GTTTTCACCAGGCTCCGTTCGACACTTCTCGAATGCGTTGACTCCGGCAA
CTCCTTATCAGTGTACGGCATCCTGCGACCGTGATCAGCGTACAGTTCTC
GAGTGCGAGGTTAAGGGGCTAGGCTTGCCTCGTCTACTCGTAATAGTCAG
TACAGTACAGTAGTACACTTACGTTTCCTAACTCCACAGCGGTTCGTCAG
CTAGAGTCCTGGAGACCGTCCTCCCAGCACTCAGAGGAACACCATGCCCC
TGGGTACAGTAAATATTTCAAGACAGCAATTCTGTATTTTCGAGAGCTTT
CGTGGCCCCATCATCTGTATCGTACGTACAGGGAGTTCTACCGTACTAAG
CCTACTTTGCCTCTGCCATTCGAACTAGAAGGCCTGTCCATGCTCGCACA
CAATCACGCGCGGACACATAGCTCTCCACCGCTCATTACTCCACTTCCCG
TCAGCTACGAGTACTCGTACAAGTACCTGATTCATAAAATATTGGTTGTC
TCGTCCATCCAATTTATTCAACGCACACCGCCATCGTTGCTTTCCTTGCG
CCCCCCGCCCCCCCTCTCTCGCCGAAAAGCGTCAATTGTCAAAAATCCGC
GGTGCAGCGTCTCCCGGCACACCATTATGCGCTGGCGCTACGGCAGCTGT
CAGGCGGGACCTGAGCTCGAAAGGTCCCGCCGGAGACATAATCGGGATTG
ATCTAGGGACCACGAACTCTTGCGTGGCGATCATGGAGGGAGGAACGCGC
GAGTCATCGAGAACACGGAGGGGTCACGGACAACGCCTTCCGTAGTTGCT
TTCCAGGTACATATTAAGTAGCTCTCCCCATTTCAGCTATGCAGTACTAG
TATTTCACAAAGGCGATGGCGGCGTGGCCACGATAGGATCACTGACTGCA
CATAACAGTAGTACACAAAAAGAGTTGTATCAGTAATCAGTAATAGTGCT
TCTCGTACTGTCTACGCAGACAAATTCCAAGATTATTGCTCCTTCGTGTA
CCTCCTACACGCCTTTCAATCATAAACCCTCCATAAGTGGACTCTATTTA
ATAGCGCATGTAGGAACCATTTTAATACCGCTGTGACGATAGGTGTATCC
TATTTTCCACAGCAGTTTCTCCTTGTAAAACGGTGGGCTTCTCCCACATG
ATACGTACAGAGGGGTGATGTAAGTACGTACTACGATGGTGTACCAGTAA
TCCATTTGGACCAATGAGACTTCCAGTTTTGTCTTGCAGTGAGTGTAAAC
AGCCGACACAACGGCATGTATCGAGTCCGAACGTGACGAGCCAAAGTCCT
CCGGAATTTTGCCGTGCCTTGAGTTAAGCAAAGTGCAGTATTTTTTAGGG
GATTTGGCAACATGTTAGAAAGAAAACATAGCAGCAGACTAAAGCACAGC
AGTTTTTTTGTTAAAACAAGAGCCAGAGAAGTTTTTTTTTTCTCTTCTGG
TATTCTTGATAAAACGGTTGTTGCGGGGATTTCATTATTCAAGTTCATTT
TTACCCCGCAGCCAGACTCCGCACCATCGCCAAAGGCCAAAGCCGCTAGC
TTGGAAATTAAACTATTATACTGTACTGGTAGCTTCCATGTCGTACAGCT
GTAGCTCTAGAACTGTACCAGTATATAATTGGCGATGCTTTCAATATGCC
CACCTCATACCATTATATAGTGGGTATGGGAAAGAGAGGCGCATATTAAT
CTGTCCATGGTGACCTGCCAAGGCAGCACTCCTTCGGAACGACGTTGAGC
TTTATTGGCTTTGTACCGGCGGACTCTTGGCAGTGAACGCCATCGGTACG
CAATTGCGTGACCCGATAAACTCGGGACTGACCCGATGACATATGGCGGT
TTAATATAAATAAATGGACGCCACGGCAGAACTCGGGAGGAATCCGTAAG
CAAGCACCAGATTCAGCCTGAGCATGGAGATGAGCAGACTGGCGCGGGAT
GGGACTGCCGAACCCGTCTCGCGAGACCAAATTATTAGGCGCGAACGCGG
ACAGAGAAATATTCATATTCCCTGTTCAGCTGACCATGACCAGGATTGGC
AACCTTACCAGGATAGTCCATACTCGTGCTATATGTGTCAATATACATAC
ATACATACATGATAATGTATTCTGGGTGTCCGATAGCATTCCTTTTTCTT
GTCCTTATTATTATAATAGTAACATTCTCTTTTTTCTATATTAATAGCAC
GATCACCAACATTTTATCACAAGAACCTCAAACTCGTTGATACAGCATTA
CTGTCTGTATTTTGTATTTGCTACCTTGTACCTGGTATGATAGTAAAGCA
CACCAATCACTCGTTCGAAGAGCCTTTGGAATAGCGCGCGTTCCTCCTCC
GACTGAGTAATCTCTGTTCCTACCGTTACGGTCCATTAACCACAGCGCGT
TATTGTCGTGTAGAGTGGGATGTAGCGTACAAACACGCTAATACTAGTGA
GTGTAGGCATAGTATGGAGTTGTATGCTGGGCTCGAGGCCACTACGAACC
CGCGCGTGTAACATGCCTGGTAATTATTCGGCTTTAACGGACACCGCAGT
ACGATGTACCAGTCAAGACTTGCGTGGAGGAAGATCTTTGGTGATGATGG
CTGGCCTTTAGCAACAGCTTGATGGTGTTGCACTTTCATGCCTCGTCCCT
TTTTTTGTGCGCCAAAGTTCCGATTGGGTTTTCAAGGGGCCTCGCGTGAG
GTCGTCCCGCCTTGGCCGTTTCCAACGTGCGAGGCGTGCACGCCGCGATT
GTCTTGTTGCATGACGTCCGAGTCTGAAGCTCTTACGAGGTTTCGTTCCA
ACCCCCAAAAATACTTGATTCCTACCCTTCCCTTCCCTTCCCATCTTCCC
GAGCTCCCCATCGCCAACTAGTAACGCTCCCCCCCCCCATTCCGTCTGTT
TTCCGCCCGCGCATTGTGTATGTGGCCGTCGTTACAGCCGGACGGACAGC
GATTGGTCGGTCTGGTGGCGAAGCGGCAGTCTGTCACCAACCCGGACAAC
ACGCTTTACGCCACCAAACGTCTCATTGGCCGCCGCTTCAAGGTAATACC
CTTCCCCATTTTACCGTGTATCAACCTTAATAGGGTGTTATTGCCATAGA
CAGTGGAGGACTATGATGCTTGCTTACGTTGCTATAACCGCCAGATGATT
CTGTATAGTGCCTTTTCGTCACCACATACGCGAACCCCACCGCATAACTC
CCTATGTTGACAGTTCTCAGTCGTTCGTATCTATCTCAAGACACGGTGGA
TAGTGTCAATCAGCGTCCCGTTTGAAAGAAGGGGTGTCAATAGAGGAAGC
TTTCTACTCCCCGTTCGGCGTTTTCCTGTAGGAGCACCACCGTCTCCCCC
CTCATTGTTCGACTCCAAAATAGAGAAATCCTCGCGCAGTTGGAAGAAGA
AATCGCGTATTGTAGTACCTTGCCTCTCTCCCCGACTCCTATGTCAATGT
TCGAAAGTATATAAAAGCCTGGCGGCTGGAAGCTTCGTACCGCTCTTCCT
CTTCCATTAATCCCTACGCCTGGTGGTCGAAAACCGGGTCGCATGGACGA
CAAATAACCGCAGGATAAGGAAGTGCAAGAAGTGCAAAAGCTGGTGCCCT
ACAAGCTTGTTGAGGGCCCGGACGGTGCCGCTTGGGTCGAGGTGCAGGGG
AACAAGATGAGCCCGTCCCAGGTGTGAGAAAAGGTCGATGCTAGTATAAC
GAAATCCGCGCTGTCTCGCACCCGTGCACAAGACCTCGCGCTCGGTGTGG
GGAGTCGAGCGCCGCATATTATGGTATTTACGAAACATTCCCGTAGTAGT
AACGCGGCCGGGCGGTAGAGGGGGGAGGGGTTGTGGTGGCCAATTACACA
ACGCCTCTTGGTAATATTTGTTGTTTGTACCACATAATAGTATTCTAGAG
AACGTAATAATGGGGCGCGCGCTGATATGGGATCGTCCTGTTTGCTCTAT
TTTGGCGGTTCTGGAGGGTATTGATGACTTGCTATCGAGATGTGAGCCGT
TTCCATTCTTTAAACGGTTCTGAATTTGTTGATGGAACATCTTTATGTTT
TTCGTCGCTTACATTTTTTTCTTGTTTTTTCTTGTTGGTTGTCTTGTGTC
GGAGCAGGTGGGGTCGATGGTCTTGACAAAGATGAAGGAAACCTCGGAGG
CGTTTCTCGGGCGACCGGTCGGGAAGGCTGTCGTCACCGTACCCGCATAC
TTCAACGACGGCCAGAGGCAGGCTACCAAGGACGCCGGTCGCATCGCGGT
AAGAGCCCCCCCACCCTCCCCACGCCCTCCTACACTATAATAAGAATCAA
CATGACATAGTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGA
GTATGGAGATGAGTAGGCTGGCGCGGGACGGATTGCCGAACCCGTCCCGC
GAGACCAAATTCTCAGGCGCGAACGGGGACAGGAAAAAAATCATCTTCCC
TGATCAGCTTGCCGCGAGCAGGATGGGCAACCTTACCCGATTGATCCTTG
CTCTTGCTATATGTGTGACCATACATTCAAACATACTGGATCCTGTATTC
CTGGACCCTCTGATGAGTGTCACGAGTAGCCCGAGCCTGGAGGGTGTGTC
AAGTCTGAAACGAGTTGATCGTATGTGTTTGTGTATTAGGCGTGTCGCGT
TAAGAGCTAGTGTAATATCTTTCTCGAATGAGAGTCATGTTACTCGTTAC
CGGTACCGTGAATAGATGTCGCGTCTTGTGGTACATACACCAGCATCCTG
GCCTGGCGTTACGGTTGTATTATTCTGCAGCCCCAGCAAGAGTTCCGGTA
GCATCCAGTAGTATCCGATAGCATTGGTTTGTTGGTGGCGTGTGGAGTGA
CTGAGCACAGCACACACGGCATACGCATAATAAAACACACGTCCCCGTTT
GTACTCCATATGGTGTTTTACTGTGAACAGTGAATTCGTCTAGTGCATAA
TATATTTATCTTGTGTAACATCCAGCGGCATGGTGTAGTGTATCTATAGT
ACCGTCTAGTGCTTTACTCGGAGTCCCACATAGAGTGGTATGTAGCGTAT
CACGTAGTTTATTACTGCCTAATTTCATGTTGTTTTTCATCGATCGGAAG
TACAGATGATGCCTTCGGGCCCCCGCTATATCATACACTATTAATAACTT
ACCAGTATACTGATGCCTTTCCTTTCCTTACGTTACCTTGTCTCTCCCTC
TCTCCTACGAAATATCTTACAAAAGGGTCTGGAGGTGATGCGCATCATCA
ACGAACCGACAGCAGCCGCCCTGGCATACGGCCTTGACAAGGCCGACGGA
AAGCTCATCGCCGTCTTCGATCTTGGGGAGGAACCTTCGACATCTCCGTC
CTCGAGATCAGGTGCTACTGTAGTAGAGAAACATTGTTGATGGTTTCTTG
TTCTCCACCCTTACGATACTGTTATGACCGCTACGTGATGTACAGTACAT
CCCTTCCAACGTAGAGCCTAACCGATGGCAAAGGCTTTACGCAGTTCTAT
CCACTTGCGGCCATACAAGGTACGCTGTCGGGTACGCTGTTCGTACTCTC
TTCAAAACACAGTTTCGTGTCCCTCATGTGCTTCCCTGTACTATTTTTGT
GTGAGTGCTTCCGAGTGGGGAATGGAAATCCCAAAATTCAGCGGGGGCGG
GAGCAgGGGGTGGGGAGCAGTTTGTCACCGATACGATGGTTGTTTTCTTA
ATCCTTACGTAAGCGTGGTGTAACGCTGAGCCAAACGCCATGCGAAAGCA
TGGCAAACTTTTTTGTTGTTGTCTTCAGCCTTGTCCTCGGGACTGATTGA
TTTTTACCTGGTGTTTTAGTCTTTTGAGAACATTGCCCGTCTGTGTGCTT
GTGTGTGTGTACAGAGTCATACACAGAGTGAAACTATAAGACCAGGCTAC
GCTATTATAGTCAGCCCCGACTAGTCAGCCCCGACTAACAACGAGTAGCA
GCTGGTTTTTGGACTAAAAAAACAGACGTTTCTTCTCTGAGGGCGAGGCT
GCTGGTAACTTAATTCCCTCTAAACTGAGTGTAGTTTTGTGTGAACAAGT
GCCTCCAGGTAGTATTAATAGTCCGGTACAGTAGCAATAGCAATATCATT
AGTCCGGTACAGTATCAAGCCTTCTCTGGCATCGTTCCATCGATTTTTGC
ATAAGAAAAACACACGCTCGTTCCACAAAATCTTTTTTTTTTTAAAGCAA
CTAGACTAATCCGGGCTTTTCGGGGTGTTCGTGGTAAATCGCAGCGGAGG
CGTGTTCGAAGTCAAATCAACCAACGGCGACACCCTATTGGGTGGTGAGG
ACTTCGACGAGCTCCTTCTCAAGGTCGGTGACGGTGGCATTTTTTTTTCG
GTTTGTTGTTTTGTGCGATGAAATATTTTTAGTAAACTACTGTGCAATTT
CATGGGTTGCCGCACTTCAAAATTGATATTTTTGTAACTCCATGGGATAC
AGTACAGTACAGAGGAGTATATTACAGTGTATTGTATTAGTTTCACATTT
TTTGTCGTTGGTGTTCTATTTTGTCTGAGAGCGAAGTTTTCACTAATAAA
ATCCCTTTTCAATTTTGGAGATTTTTTAATGTCGTATATATATAGACTCA
TTGTTCATATTTTTTTACATTCTAGGCTCTATGGTGGTATATATACCTGG
TACAAGTATGCAGTAAATATATATTTTTTAATCCTGGCCGGGGGTCATAG
CGCCCATGGAAAAGATAAGCGTCAACATGCAATTTAACATTTCAACATTC
TTGACGCCGACGCTCACTACCGAAGGTCACTCTTGAAGGTGTACCATTAC
ACTATCTCAGAAGGTCTATCATAGATGCGTTCAGATTTTTCTTTAAATAC
AGACCTACTGCAGTTACCTTATTATTAATAGTTACTTCCGGAAGCGTCTG
AGTAATGGCCCACCGAGAAAAAGGGGGGCGGGGGGCGGGAGGTATACAAA
TTGAAGTATTTTTTAGATTCGCCTGTCTAAAAACATGGGGATGCACGCCC
GAGAGACGATACTTTCGATCACTCTCGGCGTTCTTCGAGGGCTGGCTCTA
CGGTCATAACTTTGGTCGCTGAAGGTGTTGATTCTGTTCCGCCTGCACAC
TCGGTTTCGTATCTCCATCTTCTTCGGAGTATACTGTACGGGATATCAAA
TACGATTCTTAATGATTATATGTAGCTCTTGCCATGTTTCCTTTTAGTTT
TAAGATAAATAGCGCGGTGTTTTGTGATGACAAAAACGTGTTCGTCGTTC
TAAGATTATTAGTGAAAGTTTTTCGGAAGGCTTCCAGAATTTTACGACAG
TTTGACCTCATGCCGAACACAATCCCCTTTCGGGGTTCAAAACAACCTTT
GGATAGGTCATTCGCCTCATGCCTCTCTCTCCAACCGGACAGCGATAGCA
CACGCTAGCGCCTAGCCTTTGACCCTTCCGCCCCGAAACTACCCCCAGGG
TCAACTATTACTAATATAACATAGCTACGATAGTTCGAGAAATATATGAT
ATCGCTGGTGGACTTGAGACCGGCGCCCCCTTTGGTGTTGAATGCGTTCG
CTCCCATCAACAGTATTCAGGCGCTCCATGCCTTGTTTCTGCCTAACAAA
TAGTTGGTGACACCATTCTCATAACAGTCCCTCCTTCCCTCCCGTTGTGA
TGGTTTTGTTATTGGTGGGGGTTGGTTCGAGCAGCACCTCCTTGGGGAGT
TCCGCAAGGAATCCGGCATTGACCTCTCGGGGGACACTCTGGCGATGCAG
CGTCTCCGCGAGGCGGCCGAGAAGGTGAGATGTGAAATGGAAACACTGTT
GTCATATCCACGAACCACGCACTCCGTGGTACTTTTTCTGTCTCGTACTG
TTAATCATTTTGCACCGTAGCTCAATGTTTTTCTCCCTGTGTGTCCGGTC
CAATACCGCCGAGTGGCAATTGCAGATTATTAATAGTTGCCCTATAGCAG
CAATACAGCGCGTTGCTGATGTTAAGTTACTTATAGTTGTCCAACCATCT
GCCCTTTGTGTTTGTGTTTGTGTGTTTGTTTATCTTTGGAGGGGTGGGTC
GAGAGCGTGCAATCCTTTGTTTTCTGGAACTCTATAAGTCTCTCTCTCTC
TACCCCCTTTCCTTCCTCCCCCTCCCCGGGGTTTCCAACAAATTGATAGC
GTGCAGTCTCATCATCGTATCTGGTGCCTTTGCCTACGCCACTGTAGTCA
TCGTCTATCACAGCGCAAGCCGGCCAGTCTCTGCCGACACCCTTCAACGT
AACACGCCCGCCATGTACCCTCGTCGTAATGCCTCCCGGTCATGATCATG
ATTTTTGAAGTGTAATTGGTTCCTTGCTGCTGCTGCTGCTGCTGCTGCCG
CTTCTGCTATTAACAGGCCAAGCGCGAGCTGGACGGCATGCCGCAGACGG
ACGTATCTCTTcCCTTCATCACTGCGGACTCCACCGGCCCCAAGCACATG
AACGTCAAGGTCTCCCGATCCGCTTTCGAGAACCTCGTGGACGGCCTGAT
CGAGCGTGCCATCAAGCCCTGCAAGAACTGCATCCGAGATGCCGGACTGT
GAGCTTTTCAGCCCTTTTTTACCCCCCCctCCCCCCGCCCCTTTGTACCC
GCTTCCTTTTTCTCGTAGTACAAAACGTAGGATGAAAGGGTTGTGTTATC
ACCTTTCACCCGATCTACCTCCTTTGTTCCCTGGGTGGAGCGGATACCGG
TAGTCTTTTAGTACTTCGTGCGTTGTAAAAGTGTGCCCCGCCCCCCACCC
GTTATAGTTGTTCTTCTCATCAAAATATAAAAATATACAGTATCGGGATT
ATATACTATAATATTATGTTATTACAGCCTACGTTCACCCCCCCTTCCCA
CTTGATCGTAGTACTCGCGTGTGCTCATGTTTGTACCCTGTAGTGTCTAC
AAATTATAGGTAAACTCACGTAAGTGTGTCTTCGTGTTTGTTTGTGGAGA
CCCCACCCGTTTCTGGCATGCTTGTCTTGCTCCTCTTCTCTTCTCTTTCA
ATGTTGAATACTTCGTGAAAAACAGGGAAACTAGTGACGTGCACGAGGTA
CTCCTGGTGGGCGGCATGACACGGATGCCCAAGGTTCAGGCCAAGGTGGA
GGCGTTCTTCGGAAAGCCGCCGTCCCGTGGTGTGAACCCGGACGAAGTAG
TGGCCATGGGGGCGGCCATTCAGGTGCCGTGATGTGTGATGTGATGTGAT
GGAGTCGGAGGAAATCAAGTGTACAGAGTAGCTCTGGTATCATTAGTGGT
AATGGTATTATACATGTTAACAGTATGTGATGTAATGCACTGTAACACAA
GTTTAATGTAACGTACATGATGTAATGAGTTGTGCGTGTACTGTGATTGT
GGTGGAATACAGAAGTGTCACCTGGTATGTATTAAGTTGCACCATATTTT
TCCTGAACAAGGTCTAAAGTGTCTTAATAAAGTACAAGATTTCTTTCATC
GCTCGTACGAACATTATACACCTTTTCATAGTTATCATTACCATACTTTT
CTTCACCGGCGACTTATGTTAGAGGTGGGTATTTGTTTTCGGCTcccCCC
CCCTCCCGCGACAACCGCCTCTTTTATTGTTTGAAACCCATTGTCAGGAG
GCCAGTACCTAATCGAGACAGCGACTATGGGTTATTCGTTCTATGTTGTA
GTTTATTAAGCTTGGTGATTCAACGGCGAAAATATGACTGTGACCAATCA
CTGCTGGGACCTGGCGCGCGTTTCTCGTTAGTGACCGCTTTCCGAACACC
ATGCTTTATTTTGTGTGTGCTCGTGTGAATTCGCTCATTGGTCTGGCATG
GTATGTTATGTTATGGCAGGGGGAGTGCTGAGGGTAGCGTGAAGGACATC
TTGCTGCTGGACGTAACGCCCCTGTCTCTCGGTATCGAAACCCTTGGAGG
CGTGTTCACGAAGTTGATCAACCGCAACACCACCATCCCCACGAAGAAGG
TTCAGGTGAGCTTACTTCAGTATTTGTCTACTATTAATAGAGCTGCCGCA
ACGGGGGAAGATGTCACCCGCTGCCACCCATCCTTCAGCGGGAAAAGCGA
AAACAAAAGCTCGAAGAGCGCTATCGTTGTCGAAGACCGACCGACCTTGT
CCCGAAGACAAGCTCGAGAGCTTTGCTCTCCTGGAGCAGGTGGTGGGGAT
ATTGCCTAATGCTGCCGGATGAAGGACTGTGTTATCTTGGATGCGACCCT
TATATCTTGTCATATCGTGTCATATCTTGTCTTATCTCATAATAGAGAGG
TTCACTCTCTTTCTGTGTTGCGGTGCAGCACCTGCGACGATCTCACCCTT
TCCCGCAAATACTTTCCTCTCTTTTGAAAACCCCCCCGGTGCTGCCGATG
GCACGGGACGCAGACCTTCTCCACGGCGGCAGACAACCAGAGCCAGGTGC
AGATCAAGGCTCTGCAGGGCGAGAGAGAAATGGCGACGGATAACAAGATG
CTGGGGCAGTTCGACCTCGTCGGCATTCCACCGGCGGCGCGGTAAATACT
ACTAATAATGACAAAAATACTTCCAAACATTTACCGGTACAACGATTAAA
AGTGATAGTTGTGTGTGTGTTCGTGATGAAGTTCTTGCGCCAAAGAGGTT
TCGGTAGGGGGTTCTTCTCCTTATACCTGCATTAAAATGAAGGTATATAA
TAGTGAAATAGTATGGTAGTGTGTCGTTATTCTTATTGGATGAGGGGTAT
ATATATTCTTTATAAATATGTTCAGTCTTCGGTACTACTCATGTTTCCAT
ATACACCGCAGGGGTGTGCCGCAGATCGAAGTGTCGTTCGACATCGACGC
CGACGCGGATCTTGCACGTTGGTGCCAAGGATAAGCAGACGGGCAAGGAG
CAGAGCATCGTCATCCAGAGCTCCGGGTGGTCTGGGGAGGTCAGCAGAGG
ACGACAGACGTCGGACATTCATGTTTTACGAAAATCTATGTCTTTGCCTT
GATATTATTTTTCAGAAAAATAAATGATCCTGTAATACAGTAGTACCATC
TTCCCTGTGGTGGAGGAGAGGTTTCACCAAACGCCGTCCTGTGTCGTTTC
GGTATTTGAGCCGTCAGGTCATTGATACGAAGTAATTTCTCTCAACATTA
TTTCTTATTGAAAGACCGCTTGAGTACCGTACCTGGTTACCACTCTAAAT
GCGTGACGTACCCCCTTCAATTCATAATGTGTCGCTCATAATCTCAAATG
GACCTCTTCCATCGTTTGACGCGCGGCACCTTTTCCATGGTGTTTTTGGG
TCTAGGCACTCTATCTTATATCGTCTATCGTATCGAGTACCGCGTCTCGC
CGGCTAAAATGACTGACTCATTTGCAATACAATGATACGGTATTTCAGTA
ATACAGTACAGTAGATGGCAGTCGACATCCCGAGAAAGAGAGAAAGAAGC
TGTGTTTGGCGAAAGACGTTATTATATTTTGAGTGAAAGTGCCAATCCCC
CCCCCCCCCCCTGACAAATCGCACGCTCTTGTGTGCAAGAAAAGGCAGGG
CTCTACAAGGCAGTGCTGCACGGAAACGTTTGTACCCTTTTTCGTCTCGC
CCAACCCCAGCTTCTCCCAACTTCACCACCCTTTGCGCCCCCCACGCGCG
ACGTTATTTGTTCCACACGTTGCATGTTGCATGGGGTCACTCGTTGCGTT
GCTGCTTTTTATTTTCAGGCGGACATCGAAAAGATGGTGAGGGACGCCGA
GGAGAACGCCGAAGCGGACAAGCAGCGGAGGGATCTCATCGAGGCCAAGA
ACAACGCTGACACCGCCGTATGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1086:157795..169817+

>mRNA_F-serratus_M_contig1086.798.1 ID=mRNA_F-serratus_M_contig1086.798.1|Name=mRNA_F-serratus_M_contig1086.798.1|organism=Fucus serratus male|type=CDS|length=1404bp|location=Sequence derived from alignment at F-serratus_M_contig1086:157795..169817+ (Fucus serratus male)
ATGCAGCGTCTCCGCGAGGCGGCCGAGAAGATGCAGCGTCTCCGCGAGGC
GGCCGAGAAGGCCAAGCGCGAGCTGGACGGCATGCCGCAGACGGACGTAT
CTCTTcCCTTCATCACTGCGGACTCCACCGGCCCCAAGCACATGAACGTC
AAGGTCTCCCGATCCGCTTTCGAGAACCTCGTGGACGGCCTGATCGAGCG
TGCCATCAAGCCCTGCAAGAACTGCATCCGAGATGCCGGACTGCCAAGCG
CGAGCTGGACGGCATGCCGCAGACGGACGTATCTCTTcCCTTCATCACTG
CGGACTCCACCGGCCCCAAGCACATGAACGTCAAGGTCTCCCGATCCGCT
TTCGAGAACCTCGTGGACGGCCTGATCGAGCGTGCCATCAAGCCCTGCAA
GAACTGCATCCGAGATGCCGGACTGGAAACTAGTGACGTGCACGAGGTAC
TCCTGGTGGGCGGCATGACACGGATGCCCAAGGTTCAGGCCAAGGTGGAG
GCGTTCTTCGGAAAGCCGCCGTCCCGTGGTGTGAACCCGGACGAAGTAGT
GGCCATGGGGGCGGCCATTCAGGTGCCGGAAACTAGTGACGTGCACGAGG
TACTCCTGGTGGGCGGCATGACACGGATGCCCAAGGTTCAGGCCAAGGTG
GAGGCGTTCTTCGGAAAGCCGCCGTCCCGTGGTGTGAACCCGGACGAAGT
AGTGGCCATGGGGGCGGCCATTCAGGTGCCGGGGAGTGCTGAGGGTAGCG
TGAAGGACATCTTGCTGCTGGACGTAACGCCCCTGTCTCTCGGTATCGAA
ACCCTTGGAGGCGTGTTCACGAAGTTGATCAACCGCAACACCACCATCCC
CACGAAGAAGGTTCAGGGGGAGTGCTGAGGGTAGCGTGAAGGACATCTTG
CTGCTGGACGTAACGCCCCTGTCTCTCGGTATCGAAACCCTTGGAGGCGT
GTTCACGAAGTTGATCAACCGCAACACCACCATCCCCACGAAGAAGGTTC
AGACCTTCTCCACGGCGGCAGACAACCAGAGCCAGGTGCAGATCAAGGCT
CTGCAGGGCGAGAGAGAAATGGCGACGGATAACAAGATGCTGGGGCAGTT
CGACCTCGTCGGCATTCCACCGGCGGCGCGACCTTCTCCACGGCGGCAGA
CAACCAGAGCCAGGTGCAGATCAAGGCTCTGCAGGGCGAGAGAGAAATGG
CGACGGATAACAAGATGCTGGGGCAGTTCGACCTCGTCGGCATTCCACCG
GCGGCGCGGGGTGTGCCGCAGATCGAAGTGTCGTTCGACATCGACGCCGA
CGCGGATCTTGCACGTTGGTGCCAAGGATAAGGGTGTGCCGCAGATCGAA
GTGTCGTTCGACATCGACGCCGACGCGGATCTTGCACGTTGGTGCCAAGG
ATAA
back to top