mRNA_F-serratus_M_contig1086.794.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: A0A6H5K314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K314_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.940e-28 Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 39 VPVSLRV-LSGQTPACLVEVYLAHTKECSSRSDVIELVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 +P RV L+ C++E++ AHTK+ + SD+I+L ++ SDGVWEWFPS+N+E+MSKRFWSILGYD +M +P AW ++P D + +A F+AH+ + G +PY+ V Sbjct: 64 IPCKCRVVLALDEDLCVMEMFPAHTKKWTQSSDLIQLTDLASDGVWEWFPSVNFEYMSKRFWSILGYDQHDMDETPLAWMDCLNPDDKEAVLAMFEAHMKSGGASPYHSRV 174
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: D8LP35_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP35_ECTSI) HSP 1 Score: 108 bits (269), Expect = 6.000e-25 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 39 VPVSLRVLSGQTPAC-LVEVYLAHTKECSSRSDVIELVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 +P L+ + TP +VE++ AHTK SD+++L ++TSDGVWEWFP LN+E+MS+R+W ILGYD +EM +AW I P D + HV +KG PY+ V Sbjct: 66 IPCRLQKIVNLTPHVHIVEIFPAHTKTWEQSSDLVQLTDLTSDGVWEWFPPLNFEYMSQRYWDILGYDQKEMHEKQNAWMDLIHPDDLQRVLKMSDDHVESKGNVPYHATV 176
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: Q6XLV6_9PHYC (FirrV-1-F1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLV6_9PHYC) HSP 1 Score: 103 bits (257), Expect = 2.570e-23 Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 3 Query: 66 GQTPACLVEVYLAHTKECSSRSDVIELVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLN 365 G + +VEV+LAH+K ++D L ++ +DG WEW+P+LNYE+MS RFWSILGY +M SPDAW+ KI P A+ F H + PY +N Sbjct: 76 GAADSTIVEVFLAHSKTTPIKTDFTVLADLATDGFWEWYPALNYEYMSVRFWSILGYAQADMDESPDAWKEKIHPESREFALENFVKHAESNATIPYYVN 175
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: B5LWN0_9PHYC (Putative hybrid sensor histdine kinase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN0_9PHYC) HSP 1 Score: 102 bits (253), Expect = 9.140e-23 Identity = 42/106 (39.62%), Postives = 69/106 (65.09%), Query Frame = 3 Query: 39 VPVSLRVLSGQTPACLVEVYLAHTKECSSRSDVIELVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPY 356 +PV L+ L T +V+++LA TK +D +L ++ +DG WEW+P ++YE+MS RFWSILGY ++M SP +W++KI+ D A+ ++ H+ ++G PY Sbjct: 75 IPVKLQKLWPSTDGFIVQIFLASTKASIHPTDFTKLGDLATDGFWEWYPVVDYEYMSNRFWSILGYSQKDMDESPSSWQAKIEKEDHLIALKTYEDHIQSRGKKPY 180
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: D8LPJ7_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ7_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 4.340e-21 Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 129 SDVIELVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 +D L ++ +DG WEW+P+LNYE+MS+RFWSILGY EM SPDAW KID D AMA F H ++G PY L V Sbjct: 5 TDFTILADLATDGFWEWYPALNYEYMSERFWSILGYSQGEMDESPDAWVEKIDSDDARRAMANFTEHSGSRGAVPYYLTV 84
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: UPI0003F77010 (PAS domain-containing protein n=3 Tax=Teredinibacter turnerae TaxID=2426 RepID=UPI0003F77010) HSP 1 Score: 79.3 bits (194), Expect = 8.780e-15 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 147 VEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 ++ +SDG W+W+ +YE+MS RFW ILG+D +E P P AW+ I P D A+ F+ H+AT+G P++ V Sbjct: 150 LDTSSDGFWDWYIQEDYEYMSPRFWEILGFDAQEKPHKPSAWQELIFPEDLQIALGNFQQHIATRGEHPFDQEV 223
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: UPI0003FF1771 (PAS domain-containing protein n=3 Tax=Teredinibacter turnerae TaxID=2426 RepID=UPI0003FF1771) HSP 1 Score: 76.6 bits (187), Expect = 7.710e-14 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 147 VEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 ++ +SDG W+W+ +YE+MS RFW ILGYD E P P AW+ I D A+ F+ H+AT+G P++ V Sbjct: 150 LDTSSDGFWDWYIQEDYEYMSPRFWEILGYDPHEKPHKPSAWQELIFSDDLQLALGNFQQHIATRGEHPFDQEV 223
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: A0A1Y6BGI3_9PROT (Histidine kinase n=1 Tax=Pseudobacteriovorax antillogorgiicola TaxID=1513793 RepID=A0A1Y6BGI3_9PROT) HSP 1 Score: 75.9 bits (185), Expect = 1.440e-13 Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 3 Query: 144 LVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 L+E T DG W+W NYE+MS RFW ILG+ E P W+ I P D A+ F HVA+ G PY+L V Sbjct: 139 LIEATYDGYWDWKIQENYEYMSPRFWEILGFQAHEKKHDPKEWQELIFPEDLKRALKSFDRHVASHGADPYSLEV 213
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: C6AR52_TERTT (Histidine kinase n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) TaxID=377629 RepID=C6AR52_TERTT) HSP 1 Score: 74.3 bits (181), Expect = 4.970e-13 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 3 Query: 147 VEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPYNLNV 368 ++ +SDG W+W+ +YE+MS RFW ILG+D E P P AW+ I P D A+ F H+ T+G P++ V Sbjct: 150 LDTSSDGFWDWYIQEDYEYMSPRFWEILGFDAHEKPHKPSAWQDLIFPDDLNIALNNFHQHIETRGEHPFDQEV 223
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Match: A0A7Y2E948_9BACT (PAS domain-containing protein n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A7Y2E948_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 4.290e-12 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 3 Query: 144 LVEMTSDGVWEWFPSLNYEFMSKRFWSILGYDHREMPSSPDAWRSKIDPRDFASAMACFKAHVATKGVAPY 356 L E SDG W+W +YE+MS RFW +LG++ E P W+ +I P D A+ FK HVATKG P+ Sbjct: 63 LQEHVSDGFWDWRIQEDYEYMSPRFWEMLGFEPHEKAHHPSEWQRQIYPEDLEIALLNFKKHVATKGEHPF 133 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1086.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1086.794.1 >prot_F-serratus_M_contig1086.794.1 ID=prot_F-serratus_M_contig1086.794.1|Name=mRNA_F-serratus_M_contig1086.794.1|organism=Fucus serratus male|type=polypeptide|length=120bp MFGRLVEGDVPVSLRVLSGQTPACLVEVYLAHTKECSSRSDVIELVEMTSback to top mRNA from alignment at F-serratus_M_contig1086:31128..32075- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1086.794.1 ID=mRNA_F-serratus_M_contig1086.794.1|Name=mRNA_F-serratus_M_contig1086.794.1|organism=Fucus serratus male|type=mRNA|length=948bp|location=Sequence derived from alignment at F-serratus_M_contig1086:31128..32075- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1086:31128..32075- >mRNA_F-serratus_M_contig1086.794.1 ID=mRNA_F-serratus_M_contig1086.794.1|Name=mRNA_F-serratus_M_contig1086.794.1|organism=Fucus serratus male|type=CDS|length=720bp|location=Sequence derived from alignment at F-serratus_M_contig1086:31128..32075- (Fucus serratus male)back to top |