mRNA_F-serratus_M_contig1086.793.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: UPI001E1BA19B (secreted RxLR effector protein 161-like n=2 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA19B) HSP 1 Score: 103 bits (257), Expect = 3.210e-24 Identity = 61/188 (32.45%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 16 APQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTNLSAWVDADFANCPDTRRSVSGGAVMLE---------------------------EVVNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 AP E E M+ TPY+EAVG LM+ T+TTRP +A+A +Q+ + + NP P HW+ KRI+ YL T+N G+ + + S + L+ + DAD+A +TRRS +G +L E E +L+++ L + I + DN+ A+++ + S RT+H+D+K Sbjct: 2 APTNEEEELSMQTTPYQEAVGCLMYLTSTTRPDIAFATNQVARFSHNPGPAHWEGVKRILSYLSGTRNYGLCFSGS--SSSTLTGFTDADYAGDVETRRSTTGYVFLLHGGPVAWCCKRQKCTSLSTTESEYIAACESTREAVWLKRLLIELGLQETNPIPLLCDNQSAVRLVRNPDSHQRTKHIDIK 187
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: A0A6G0X7I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7I6_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.230e-23 Identity = 60/176 (34.09%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 58 PYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTN--LSAWVDADFANCPDTRRSVSGGAVM---------------------------LEEVVNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 PYR VG+LM+ TRP +A+ HQL + DNP P HW+AAKR ++YL T++ G+ G + S N LSA+VD D+ANCPDTRR VSG ++ L + E +++Q+ L + +++ +DN+ I +A + R++H+DV+ Sbjct: 1479 PYRSLVGSLMYLAMGTRPDLAFPLHQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSD-SVHNPFLSAYVDEDYANCPDTRRCVSGYVLLFLGSPISWLAKKQNIVTLSTTEAEFVALSLCIQECLYIQQLASELKQSSDQPVVIYEDNQSTIHIAQNSEHHGRSKHIDVR 1653
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.260e-23 Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 58 PYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTN--LSAWVDADFANCPDTRRSVSGGAVM---------------------------LEEVVNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 PYR VG+LM+ TRP +A+ QL + DNP+P HW+AAKR ++YL T++ G+ G + S N LSA+VDAD+ANCPDTRR VSG ++ L + E +++Q+ L + +++ +DN+ I +A + R++H+DV+ Sbjct: 1774 PYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSD-SVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPISWLAKKQNIVTLSTTEAEFVALSLCIQECLYIQQLASELKQSSDQPVVIYEDNQSTIHIAHNSEHHRRSKHIDVR 1948
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E) HSP 1 Score: 101 bits (251), Expect = 4.220e-23 Identity = 65/189 (34.39%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 16 APQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTP-GSCTNLSAWVDADFANCPDTRRSVSG-----------------GAVMLE----------EVVNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 +PQT+ E EEM+ PY+EAVGAL++ +TTTRP ++YA Q+ K N NP HWKA KRI +YL T+ GI + P G + + DAD A PD + S SG G L E E ++R + + + I + DN+GAI++A + R +HV+++ Sbjct: 22 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILFSPNPSGKEEEIVDFTDADHAGDPDDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWIRAFLKEIGKRNLEAIPLFCDNQGAIRVANNPELHRRMKHVELR 210
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0) HSP 1 Score: 99.4 bits (246), Expect = 4.360e-23 Identity = 63/183 (34.43%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 16 APQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTP-GSCTNLSAWVDADFANCPDTRRSVSG-----------------GAVMLE----------EVVNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRT 480 +PQT+ E EEM+ PY+EAVGAL++ +TTTRP ++YA Q+ K N NP HWKA KRI +YL T+ GI + P G + + DAD A PD + S SG G L E E ++R + + + I + DN+GAI++A + ++ +T Sbjct: 2 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFFSPNPSGKEEEIVGFTDADHAGDPDDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWIRAFLKEIGKRNLEAIPLFCDNQGAIRVANNPVANTQT 184
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: A5B7I7_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5B7I7_VITVI) HSP 1 Score: 104 bits (260), Expect = 5.290e-23 Identity = 63/172 (36.63%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 19 PQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTNLSAWVDADFANCPDTRRSVSGGAVMLEEVV------NELRFLR------QVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 P+ E++EM+ PY AVG+LM+A TRP +AY LG+ NP HW+AAKR+++YL RTK +TY R L + D+DFA C D+RRS SG +L+E V N+ +LR +V + RP+ + DN+ A+ + + SS +++++D+K Sbjct: 653 PKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLDQ--LELIGYSDSDFAGCQDSRRSTSGYIYLLDEFVACYEASNQGIWLRNFVTGLRVLDGIERPLK----IFCDNKSAVLYSNNNRSSTKSKYIDIK 818
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB) HSP 1 Score: 100 bits (249), Expect = 6.620e-22 Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 16 APQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTP-GSCTNLSAWVDADFANCPDTRRSVSG 324 +PQT+ E EEM+ PY+EAVGAL++ +TTTRP ++YA Q+ K N NP HWKA KRI +YL T+ GI + P G + + DAD A PD R S SG Sbjct: 265 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILFSPNPSGKEEEIVGFTDADHAGDPDDRSSTSG 368
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: UPI001D00A395 (secreted RxLR effector protein 161-like n=2 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D00A395) HSP 1 Score: 97.4 bits (241), Expect = 1.030e-21 Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 58 PYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTNLSAWVDADFANCPDTRRSVSGGAVMLEEV---------------------------VNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 PYREAVG+L++A TRP + YA + + + DN HW A K+I +YL T + GI YG + GS +L + DAD+A CPDTRRS SG ML V E +L+++ L +++ + DN+ AIK+A++ RT+H++V+ Sbjct: 32 PYREAVGSLLFAARVTRPDIEYAVNTVSQFVDNYNNTHWSAVKKIFRYLVGTIDCGIIYGAS-GSDESLVGYTDADYAGCPDTRRSRSGYVFMLNNAPVSWCSKKQNIVSLSTTEAEYIALGHGVKEAIWLKRMLKELGIQF-ESVPMNVDNQSAIKLASNPEFHKRTKHIEVR 203
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.580e-21 Identity = 59/176 (33.52%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 58 PYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTN--LSAWVDADFANCPDTRRSVSGGAVM---------------------------LEEVVNELRFLRQVKGSLTRPIHDNIIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 PYR VG+ M+ TRP +A+ QL + DNP P HW+AAKR ++YL T++ G+ G + S N LSA+VDAD+ANCPDTRR VSG ++ L + E +++Q+ L + +++ +DN+ I +A + R++H DV+ Sbjct: 630 PYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSD-SVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPISWLTKKQNIVTLSTTEAEFVALSLCIQECLYIQQLASELKQSSDQPVVIYEDNQSTIHIAQNSEHHGRSKHFDVR 804
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Match: A0A075B126_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B126_ROZAC) HSP 1 Score: 98.2 bits (243), Expect = 1.830e-21 Identity = 58/189 (30.69%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 19 PQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINDNPEPVHWKAAKRIIQYLWRTKNVGITYGRTPGSCTNLSAWVDADFANCPDTRRSVSGGAVMLEE---------------------------VVNELRFLRQVKGSLTRPIHDN--IIVRDDNEGAIKMATSRFSSVRTRHVDVK 498 P T A+ E+M+V PYR A+G+L++A+ TRP + YA + K NP HW AKRI++YL TK+ G+ + + + +VD+D+ + DTRRSVSG A ML E +++++ ++ I DN I++ +DN G I + +T+H+ +K Sbjct: 62 PTTPADIEDMKVIPYRSAIGSLLYASCGTRPDITYAVNIASKYLSNPGKEHWLLAKRIMRYLIGTKDYGLVFQGSQNKSFIVQGYVDSDWGSDIDTRRSVSGYAFMLNHDLITWKSTRQQTVATSTTEAEYLALGLATQEAMWIKELLTEISPNIIDNEPIVLHEDNNGCIDLTKKTTQHGKTKHISIK 250 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1086.793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1086.793.1 >prot_F-serratus_M_contig1086.793.1 ID=prot_F-serratus_M_contig1086.793.1|Name=mRNA_F-serratus_M_contig1086.793.1|organism=Fucus serratus male|type=polypeptide|length=166bp LSEDDAPQTEAETEEMRVTPYREAVGALMWATTTTRPKVAYAAHQLGKINback to top mRNA from alignment at F-serratus_M_contig1086:101..598- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1086.793.1 ID=mRNA_F-serratus_M_contig1086.793.1|Name=mRNA_F-serratus_M_contig1086.793.1|organism=Fucus serratus male|type=mRNA|length=498bp|location=Sequence derived from alignment at F-serratus_M_contig1086:101..598- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1086:101..598- >mRNA_F-serratus_M_contig1086.793.1 ID=mRNA_F-serratus_M_contig1086.793.1|Name=mRNA_F-serratus_M_contig1086.793.1|organism=Fucus serratus male|type=CDS|length=996bp|location=Sequence derived from alignment at F-serratus_M_contig1086:101..598- (Fucus serratus male)back to top |