mRNA_F-serratus_M_contig1084.782.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1084.782.1
Unique NamemRNA_F-serratus_M_contig1084.782.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 216 bits (549), Expect = 3.020e-57
Identity = 119/314 (37.90%), Postives = 181/314 (57.64%), Query Frame = 2
Query: 1946 GFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 2884
            GF Q+ G+ + E  +   +  SIR+ L+V     +   QLDV+ AFL AD+ E++Y+E P+G +   ++V +L KA+YGL  AG  W K   G LI  GF+   +D C++  +  G    I + YVDD++V   T+       + + + F IK+LG + + LG  I  DR  R ++ +Q  Y +T+ ERF  +    +  P  ++  LS+ADGP++D + AEM   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG
Sbjct:   65 GFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICL-YVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSG 377          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 223 bits (568), Expect = 2.230e-56
Identity = 124/316 (39.24%), Postives = 186/316 (58.86%), Query Frame = 2
Query: 1943 KGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 2884
            KGF+Q KGI + E  SP    +SIR+ L ++A ++ E  Q+DV+ AFL   + EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   + ++G++++ AD CV+  K      V +++YVDD+L++ +  +  ++  ++L  SF +KDLG     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+   P +  EI EM  +PY  AVG LM+    TRPD+A+    +++F  NPG EHW+AV   L+YLK T  L + YGGA  D  L  + DAD A   D+R+S SG
Sbjct:  716 KGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSG 1029          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: A0A0A9X648_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X648_LYGHE)

HSP 1 Score: 211 bits (537), Expect = 3.690e-56
Identity = 118/315 (37.46%), Postives = 188/315 (59.68%), Query Frame = 2
Query: 1946 GFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KAPLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 2884
            G  Q KGI ++E  SP    SSIR  L + A+LD +  Q+D   AFL+ D+TEE+Y+  P+ Y++S N+V RL+K++YGL  A  +W+KK    L      +S+ D CV+ +K +   V+I+  YV+DLL+LS  K  +++  E L  +F + DLGE ++ LG  +TRDR  + V   Q+RY   + +RF + + + +  P      LS+   P +  + A+M  +PY+EAVG L++ + ++RPD+ +    +++F  NPG  HW AV + L+YLK +A   + +GG  E +  +  + D+D AS  D RRSV+G
Sbjct:    1 GCAQQKGIDFEETYSPVIRYSSIRYLLTLAAELDLDIEQMDAVTAFLQGDLTEEIYMVQPERYQNS-NKVCRLKKSIYGLKQASRVWNKKLDSCLKKCEMRQSKFDSCVY-FKFVDSQVLIVACYVEDLLILSNDKVMKNKLKEQLMKTFQMTDLGEANFVLGFKLTRDRAKKKVWISQERYISDMLKRFNMHECNPVDTPLSPNEKLSKEQSPVSAEDAAKMKNVPYQEAVGSLLFASQVSRPDINFAVSYVSRFSKNPGTAHWGAVKRILRYLKGSAHWKLEFGGGMEVVTDIVGYSDSDWASDQDERRSVTG 313          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: A0A4Y9ZBF0_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBF0_9AGAM)

HSP 1 Score: 223 bits (568), Expect = 4.270e-56
Identity = 127/316 (40.19%), Postives = 179/316 (56.65%), Query Frame = 2
Query: 1946 GFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAP-LSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKL-SAWVDADHASCPDTRRSVSG 2884
            GF Q  G  Y E  +PTP  S++R  LA+ A  D E   +D+  AFL  D+ EE+YV  P+G+ +  P  V RL K++YGL  AG  W KK    L A GF R + +  ++ ++    V +II V++DD+ + S+++    +  +DLR+ F  +DLG  S+ LG  ITRDR  RT++  Q++Y   + ERFG+ +   +  P      L+ A  PK   E AEMH  PYR AVG L ++A  TR D+A++   LA+FG NPG EHWKA+   L+YLK T    +TY        L +A+ DADH    D  RS SG
Sbjct:  740 GFSQRPGFDYTETFAPTPRWSALRAVLALAAIEDLELESIDISSAFLNGDLEEEIYVRQPEGFTEKGPEWVWRLLKSLYGLKQAGRCWHKKLNEVLEALGFHRIKCEHSIWVYQR-DDVRIIIPVFIDDMTIASKSQAAIQKVKDDLRAHFKFRDLGPTSWLLGVEITRDRSTRTLSLSQRQYTLDLLERFGMSQCDTVATPLNPGTRLTSAMSPKTQEESAEMHDKPYRAAVGALQYLATATRCDIAHSVGVLARFGHNPGIEHWKALKHLLRYLKGTLDYKLTYHPDPSGSHLFTAFCDADHGGDLDNGRSTSG 1054          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 222 bits (566), Expect = 5.360e-56
Identity = 125/349 (35.82%), Postives = 199/349 (57.02%), Query Frame = 2
Query: 1841 IDPKEKPYSAPRLFLNGRSA*MAV*KNKSAASKSKGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KAPLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 2884
            + P + P ++  +F   R     + K+K A    KG  Q KG+ ++E  SP    SSIR  LA+ A+ D +  Q+D   AFL+ D+TEE+Y+  P+GY++S  +V RL+K++YGL  A  +W+ K    L   G  +S+ DPC++ +K   K +V + V+VDDLL+ S+ K+        L   F + D+GE  + LG  I+RDR+ + +  DQ+ Y   V  RFG+   +    P      LS+   P +  E  +M  IPY+EAVG L++ + + RPD+A+    +++F  NPGP HW AV + L+Y+K T+   + Y G T+  +++ + D+D AS  D R+SV+G
Sbjct:  877 LPPGKVPLNSKWVFRTKRDVTGKIVKHK-ARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIY-YKSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTG 1221          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: W4VRQ4_9DIPT (Putative retrovirus-related pol polyprotein from transposon tnt n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=W4VRQ4_9DIPT)

HSP 1 Score: 222 bits (566), Expect = 5.630e-56
Identity = 129/351 (36.75%), Postives = 200/351 (56.98%), Query Frame = 2
Query: 1841 IDPKEKPYSAPRLFLNGRSA*MAV*KNKSAASKSKGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIR--KTSVIPVPTGKAPLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSG 2884
            +    KP     +F   R A  AV + K A    KG+ Q KG+ Y E  SP    SS+R   A+ A+ + +  Q+D   AFL+ D++EE+Y+  P  Y    ++  RL+KA+YGL  A  +W++K   +L + GF++S  D CV+ +K  G  ++II +YVDD+++ S          E L   F +KD+G+  + LG  IT  +    +T DQQ Y + +  +FG+   K S  P+   +  LS+AD P   AEI +M  +PY+EA+G LM+++N TRPD+++  + L++F +NPG EHW AV    +YL+ T+S  +TY  G+    ++ A+ DAD AS  D R+S SG
Sbjct:  918 LPENRKPIQCKWVFKTKRDATGAVDRYK-ALLVIKGYSQRKGVDYAETYSPVVRHSSLRYLFALAAKHNLQVHQMDAVTAFLQGDLSEEIYMRQPPMYSTDNSKCCRLKKALYGLKQASRVWNRKLDEKLKSLGFQQSTYDTCVY-FKIEGNRILIIAIYVDDMMLFSNCLNWLKEIKEKLGREFRMKDMGKAKFCLGIKITETKSC--ITLDQQHYIEEILNKFGMSECKPSYTPMQHNQK-LSKADSPNLPAEIEDMKQVPYQEAIGCLMYLSNCTRPDISFVVNKLSRFNNNPGTEHWAAVKHLFRYLRGTSSYNLTYNRGSNSASEVVAYCDADWASDLDDRKSTSG 1263          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: A0A0V1GP69_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Trichinella TaxID=6333 RepID=A0A0V1GP69_9BILA)

HSP 1 Score: 210 bits (534), Expect = 5.660e-55
Identity = 122/350 (34.86%), Postives = 197/350 (56.29%), Query Frame = 2
Query: 1841 IDPKEKPYSAPRLFLNGRSA*MAV*KNKSAASKSKGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCV-FRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KAPLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 2884
            + P +K   +  +F         + K K A   ++G+ Q++GI Y++  +PT   SS+R  L++ A+ + E  Q+DV  AFL   + EE+Y+ELP G  D  N+  RL+K++YGL  A   W       L + G  R + +PC+ F WK+  K+ + + VYVDDLL+LS  +  ++     L   F +KDLG+  + LG  I +D +  T++ DQ++Y + +  RF +     +  P      LS+A  P++D EI +MH +PYREAVG L++++   RPD+ +    +++F DNPG  HW AV +  +YLK T +  + Y   TE+  L+ + D+D  +  D RRS+SG
Sbjct:  152 LPPHKKAIKSKWVFKTKYKEDGTIEKRK-ARLVARGYSQLQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPTGVGDENNKYCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRVKNEPCIYFLWKN--KIFLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPLDPNQVLSKAMMPRSDEEIKQMHSVPYREAVGCLVYLSQSCRPDICHAVGIVSRFSDNPGKAHWTAVKRIFRYLKYTKTAKIVYR-RTENA-LTVYSDSDWGNDRDDRRSISG 496          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 207 bits (527), Expect = 2.140e-54
Identity = 117/317 (36.91%), Postives = 176/317 (55.52%), Query Frame = 2
Query: 1940 SKGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 2884
            +KG+ Q  GI + +  +P   + SI  +LA  A+ D E   +DV+ AFL  DV EELY++ PDG+ D  N   +  L++A+YG   A   W+ K    L  +GF RS ADPCV+  +   +   I+V+YVDDL++ S+TK+        L+  F IK+LGE+ Y LG  I R+R+ +T+  +Q+ Y + + E+FG+ K   +  P        +   K   E A +   PYRE VG LM++A  TRPD+A     +AKF +     HW A  + L+YLK T  +G+ + GA +   +  + DA+ A   DTRRS +G
Sbjct:   51 AKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYS-IVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPAD----CNSKLVKMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPIG-YADANWAGDLDTRRSTTG 361          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 217 bits (552), Expect = 2.990e-54
Identity = 118/321 (36.76%), Postives = 184/321 (57.32%), Query Frame = 2
Query: 1940 SKGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIA--EMHGIP-YREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK--RTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSG 2884
            ++GF QI G+ Y +  SP     ++R  +A+ A  DWE RQ+D++ A+L  ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W+KK   +L   GF R+ ADPCV+     GK+  I+ V+VDD+++  +++      +  L+  F +KDLGE    LG  I R+RK +T+T  Q+ Y  T+ ERF   K + IP+P       R    K D EI   E H +  Y+  +G +M+ +  T P LAY   TL++F  NPG EH  A+ +  +YL   R   +G+ YGG  +  + +  + DAD AS P+ R+S+SG
Sbjct:  924 AQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLR----KRDDEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISG 1239          
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Match: G8DCY4_PHAVU (Putative gag/pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=G8DCY4_PHAVU)

HSP 1 Score: 216 bits (550), Expect = 6.160e-54
Identity = 126/349 (36.10%), Postives = 188/349 (53.87%), Query Frame = 2
Query: 1847 PKEKPYSAPRLFLNGRSA*MAV*KNKSAASKSKGFRQIKGIHYQEPSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRWKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGVLMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 2884
            PK+K     R     +    +      A    KGFRQ KGI + E  SP    SSIR+ L++ A LD E  Q+DV+ AFL  D+ EE+Y++ PDG+      + V RL+K++YGL  A   W KKF   +  +G++++ +D CVF  K      +I+++YVDD+L++ +     +R  + L  SF +KD+G     LG  I RDR+ + +   Q+ Y + V +RF +    V+  P      LS    P  + E ++M  IPY  AVG LM+    TRPD+A+   T+++F  NPG EHW AV   L+YL+ T  L + +GG  +   L  + D+D     D+RRS SG
Sbjct:  793 PKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGG--DKPTLVGYTDSDMGGDIDSRRSTSG 1139          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1084.782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL3.020e-5737.90Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
UPI001F00A0482.230e-5639.24DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A0A9X648_LYGHE3.690e-5637.46Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9ZBF0_9AGAM4.270e-5640.19Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
A0A0A9Z683_LYGHE5.360e-5635.82Retrovirus-related Pol polyprotein from transposon... [more]
W4VRQ4_9DIPT5.630e-5636.75Putative retrovirus-related pol polyprotein from t... [more]
A0A0V1GP69_9BILA5.660e-5534.86Retrovirus-related Pol polyprotein from transposon... [more]
H3G9E3_PHYRM2.140e-5436.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM2.990e-5436.76Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
G8DCY4_PHAVU6.160e-5436.10Putative gag/pol polyprotein n=1 Tax=Phaseolus vul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1084contigF-serratus_M_contig1084:4978..8121 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score147.9
Seed ortholog evalue1.5e-32
Seed eggNOG ortholog5270.UM06203P0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Retrotransposon gag protein
EggNOG OGs38DPC@33154,3NUZ7@4751,3V2N5@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBasidiomycota
Best eggNOG OGNA|NA|NA
Exons3
Model size2884
Cds size1824
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1084.782.1prot_F-serratus_M_contig1084.782.1Fucus serratus malepolypeptideF-serratus_M_contig1084 5939..8022 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928933.7276456-UTR-F-serratus_M_contig1084:4977..59381622928933.7276456-UTR-F-serratus_M_contig1084:4977..5938Fucus serratus maleUTRF-serratus_M_contig1084 4978..5938 -
1690962635.4667559-UTR-F-serratus_M_contig1084:4977..59381690962635.4667559-UTR-F-serratus_M_contig1084:4977..5938Fucus serratus maleUTRF-serratus_M_contig1084 4978..5938 -
1622928934.026744-UTR-F-serratus_M_contig1084:8022..81211622928934.026744-UTR-F-serratus_M_contig1084:8022..8121Fucus serratus maleUTRF-serratus_M_contig1084 8023..8121 -
1690962635.5071452-UTR-F-serratus_M_contig1084:8022..81211690962635.5071452-UTR-F-serratus_M_contig1084:8022..8121Fucus serratus maleUTRF-serratus_M_contig1084 8023..8121 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928933.7434149-CDS-F-serratus_M_contig1084:5938..61771622928933.7434149-CDS-F-serratus_M_contig1084:5938..6177Fucus serratus maleCDSF-serratus_M_contig1084 5939..6177 -
1690962635.4811108-CDS-F-serratus_M_contig1084:5938..61771690962635.4811108-CDS-F-serratus_M_contig1084:5938..6177Fucus serratus maleCDSF-serratus_M_contig1084 5939..6177 -
1622928933.8312364-CDS-F-serratus_M_contig1084:6347..67251622928933.8312364-CDS-F-serratus_M_contig1084:6347..6725Fucus serratus maleCDSF-serratus_M_contig1084 6348..6725 -
1690962635.491975-CDS-F-serratus_M_contig1084:6347..67251690962635.491975-CDS-F-serratus_M_contig1084:6347..6725Fucus serratus maleCDSF-serratus_M_contig1084 6348..6725 -
1622928933.8423562-CDS-F-serratus_M_contig1084:6815..80221622928933.8423562-CDS-F-serratus_M_contig1084:6815..8022Fucus serratus maleCDSF-serratus_M_contig1084 6816..8022 -
1690962635.4995003-CDS-F-serratus_M_contig1084:6815..80221690962635.4995003-CDS-F-serratus_M_contig1084:6815..8022Fucus serratus maleCDSF-serratus_M_contig1084 6816..8022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1084.782.1

>prot_F-serratus_M_contig1084.782.1 ID=prot_F-serratus_M_contig1084.782.1|Name=mRNA_F-serratus_M_contig1084.782.1|organism=Fucus serratus male|type=polypeptide|length=608bp
MTPDPTGFERYETAPPGRTVEMGDGTLLPVAGYGGLRLKIEQDDADGGQT
RDLMLRRTAHVPGLRHNLLSAAQLSATFEHPMQLWPRAAVFRCPRDRKSV
MFRKSARRLFEATARRSVKQDSGKSLVAAKPMSCGIMMFHQLVAHPGEDI
TRRTAQVAGLRLTGKWNACEKCSEARVMRHAVPKSTETRADKRAGRVFID
LAGPFHVESLAGSRFAMLCVDDFSRYKIVAFMAKKSDVTAVLRAIIARYF
ASAGLNIGVIRTDNGREFQGAFQSLLAELGIKHERTPPYTPQYNGVAERT
LGLLRDKTVALLQGVTEGASERLWAEAMAYACDMSNKCVTDSLDHDKTPY
EMWHGRPTTFDTLLPFGTVGYRRVEKPAHKLASRGAKCILLGTAGPHDVN
DHRGGHSPRRGDWGGVKGDKNHSPHLEDHAVRTEALEAEVGSEKQVASEE
LRNIPEDFPLKPELPEELLEPPKLPEMRADVDEPATGLGRLEDEESEPDW
QAEQRDAPAALRKLRNAFTGDLHPILPSPASTMPTGLASYLPDEPTTLHE
AKMSSEWPQWRGALKREMDGQIARGVWKVVDRPQGKTVLGTKTVFKRKVG
LNGRVEK*
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mRNA from alignment at F-serratus_M_contig1084:4978..8121-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1084.782.1 ID=mRNA_F-serratus_M_contig1084.782.1|Name=mRNA_F-serratus_M_contig1084.782.1|organism=Fucus serratus male|type=mRNA|length=3144bp|location=Sequence derived from alignment at F-serratus_M_contig1084:4978..8121- (Fucus serratus male)
GATAAGCCCGCTGGAGCCGGTCTGTGGGCGTGCGACGACACGACCACGGC TGGCGGAAGCGGCGAGCGTTGGATCAGCGACAGTGGAGCGACGGAAAGCA TGACACCGGATCCAACTGGTTTTGAAAGATACGAGACTGCACCCCCGGGG CGCACAGTGGAGATGGGCGACGGAACGCTCCTCCCGGTGGCGGGCTACGG AGGCCTTCGTCTAAAGATAGAACAAGACGACGCGGACGGTGGCCAGACGC GCGATCTTATGCTCAGGCGCACGGCACACGTGCCGGGCCTTAGACACAAC CTGCTCTCGGCGGCGCAACTGTCGGCGACGTTCGAGCATCCGATGCAGCT GTGGCCACGGGCCGCTGTTTTTAGGTGCCCGCGCGACAGAAAATCTGTGA TGTTTAGAAAATCCGCGCGGCGCTTGTTTGAGGCAACGGCACGCCGGAGC GTAAAGCAGGACTCAGGAAAGTCGCTGGTAGCGGCTAAACCAATGAGCTG TGGCATAATGATGTTCCACCAACTGGTTGCTCACCCTGGAGAGGACATCA CGCGTCGAACAGCCCAGGTGGCAGGACTGCGGCTGACCGGAAAGTGGAAT GCGTGCGAAAAGTGCTCCGAGGCTCGGGTCATGAGGCATGCAGTACCCAA GTCTACAGAGACTCGGGCGGACAAGCGTGCCGGAAGAGTATTCATCGACC TGGCCGGACCATTCCACGTGGAGAGCTTGGCGGGGAGCCGATTCGCGATG TTGTGCGTGGATGACTTCTCACGGTACAAGATTGTCGCGTTCATGGCCAA AAAGAGTGACGTCACGGCGGTACTTAGGGCGATCATCGCCAGGTACTTCG CGTCCGCCGGACTAAATATTGGCGTCATCCGGACTGACAACGGCAGGGAG TTCCAAGGGGCGTTTCAGTCACTCCTCGCCGAGCTGGGCATCAAACACGA GCGCACCCCGCCGTATACGCCTCAGTACAACGGGGTAGCGGAGCGGACCC TGGGTCTTCTTCGTGATAAAACCGTCGCCCTGCTACAAGGAGTGACGGAG GGAGCGAGCGAACGTCTATGGGCGGAAGCGATGGCGTACGCCTGCGATAT GTCCAACAAATGCGTCACAGATTCGCTCGATCACGACAAGACACCGTACG AGATGTGGCATGGTCGGCCAACCACGTTCGACACCCTGTTACCGTTCGGT ACCGTGGGCTACCGGCGCGTGGAAAAGCCGGCGCACAAGCTGGCTTCGCG CGGGGCCAAGTGCATTCTCCTAGGTACTGCTGGTCCTCATGACGTCAACG ATCATCGTCCTCGCGGTACTTTCCGCTTGCGCGACCTGACCACCGGTGCC ATCATCTGGCGACAAGCCGTTACTTGGCACCCCACCGCCGGAGCAGGGGG GGGGCATTCCCCTCGCCGCGGCGACTGGGGGGGGGTGAAGGGCGATAAAA ACCATTCGCCGCACCTCGAGGATCACGCGGTTCGCACGGAGGCGCTGGAA GCGGAAGTAGGGTCGGAGAAGCAGGTGGCGTCGGAGGAGTTACGGAATAT ACCGGAGGACTTCCCCCTGAAGCCGGAACTACCGGAAGAGCTGCTAGAGC CTCCAAAGCTTCCGGAGATGCGAGCAGATGTTGATGAGCCAGCGACAGGG TTGGGAAGACTCGAGGATGAGGAGTCGGAACCGGACTGGCAGGCCGAGCA GCGGGACGCGCCGGCTGCTTTAAGGAAGCTCCGTAACGCATTCACGGGTG ATTTACACCCCATCCTACCCAGCCGTACAAGAAGGGGCAGGCAAGGCGAC AAAAATGAAAATGTCGGTGGGGGCGAGGGCGCCCTCTGTTGCAACGTGCC GAGTGAACAAACGCTACCGGCGTTGCGGTAGGTGTTAAGCCAAGCCAAAT CTCACTCGAGTCTCGCAGGGCGGATCACGCGATCGCCCTGCAAGCGGCAT CGACGATGCCGACTGGTCTCGCGAGCTACCTACCGGACGAGCCCACCACC CTGCACGAAGCGAAGATGTCCTCCGAGTGGCCGCAATGGCGCGGCGCGCT CAAGCGCGAGATGGACGGCCAGATTGCGCGTGGTGTGTGGAAGGTCGTCG ATCGACCCCAAGGAAAAACCGTACTCGGCACCAAGACTGTTTTTAAACGG AAGGTCGGCCTGAATGGCCGTGTAGAAAAATAAAAGTGCCGCTTCGAAAT CCAAGGGTTTCCGCCAGATCAAGGGGATTCATTACCAAGAGCCATCGTCA CCGACACCTACACAGTCGAGCATCCGGATGGCGCTGGCGGTGATGGCCCA GTTGGACTGGGAGGGGCGGCAGCTTGACGTAGAAATGGCGTTTCTCGAGG CGGATGTTACGGAGGAGCTATACGTTGAGCTCCCCGATGGGTATCGCGAC TCGCCGAATCAGGTTGGACGACTGCAGAAGGCCATGTACGGTCTGATGCA CGCCGGACTACTGTGGTCGAAGAAATTCGGCGGAGAGTTGATAGCGAAGG GGTTCGAGAGGTCCCAAGCCGATCCCTGCGTGTTCCGGTGGAAGCATCTA GGGAAGGTCGTCGTCATCATAGTGGTCTACGTTGACGATCTACTAGTGCT GAGCGAAACGAAGCAGGACGAGCATCGGGCGATGGAAGACCTTCGATCCA GCTTCCCCATCAAGGATCTAGGGGAGATCTCGTACTACCTGGGATGTCAC ATTACTCGGGACCGCAAGGCCAGGACGGTGACGTTCGATCAGCAGCGTTA CGCGCAGACGGTAACCGAGCGATTCGGAATTCGGAAGACCAGCGTGATCC CTGTTCCTACGGGGAAAGCACCACTTTCGAGGGCAGACGGGCCGAAAAAC GACGCTGAGATCGCAGAGATGCATGGCATCCCGTATCGCGAGGCAGTGGG GGTACTAATGTGGGTAGCCAACATGACTCGGCCTGACCTAGCTTATACCG CGCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCCGAGCACTGGAAG GCAGTAATGAAAGCGCTACAGTACCTGAAACGAACGGCGAGCCTAGGGGT AACATATGGAGGCGCGACGGAGGACATGAAGCTATCGGCATGGGTGGACG CCGATCACGCATCATGTCCTGATACGCGTCGTTCGGTATCGGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1084:4978..8121-

>mRNA_F-serratus_M_contig1084.782.1 ID=mRNA_F-serratus_M_contig1084.782.1|Name=mRNA_F-serratus_M_contig1084.782.1|organism=Fucus serratus male|type=CDS|length=3648bp|location=Sequence derived from alignment at F-serratus_M_contig1084:4978..8121- (Fucus serratus male)
ATGACACCGGATCCAACTGGTTTTGAAAGATACGAGACTGCACCCCCGGG
GCGCACAGTGGAGATGGGCGACGGAACGCTCCTCCCGGTGGCGGGCTACG
GAGGCCTTCGTCTAAAGATAGAACAAGACGACGCGGACGGTGGCCAGACG
CGCGATCTTATGCTCAGGCGCACGGCACACGTGCCGGGCCTTAGACACAA
CCTGCTCTCGGCGGCGCAACTGTCGGCGACGTTCGAGCATCCGATGCAGC
TGTGGCCACGGGCCGCTGTTTTTAGGTGCCCGCGCGACAGAAAATCTGTG
ATGTTTAGAAAATCCGCGCGGCGCTTGTTTGAGGCAACGGCACGCCGGAG
CGTAAAGCAGGACTCAGGAAAGTCGCTGGTAGCGGCTAAACCAATGAGCT
GTGGCATAATGATGTTCCACCAACTGGTTGCTCACCCTGGAGAGGACATC
ACGCGTCGAACAGCCCAGGTGGCAGGACTGCGGCTGACCGGAAAGTGGAA
TGCGTGCGAAAAGTGCTCCGAGGCTCGGGTCATGAGGCATGCAGTACCCA
AGTCTACAGAGACTCGGGCGGACAAGCGTGCCGGAAGAGTATTCATCGAC
CTGGCCGGACCATTCCACGTGGAGAGCTTGGCGGGGAGCCGATTCGCGAT
GTTGTGCGTGGATGACTTCTCACGGTACAAGATTGTCGCGTTCATGGCCA
AAAAGAGTGACGTCACGGCGGTACTTAGGGCGATCATCGCCAGGTACTTC
GCGTCCGCCGGACTAAATATTGGCGTCATCCGGACTGACAACGGCAGGGA
GTTCCAAGGGGCGTTTCAGTCACTCCTCGCCGAGCTGGGCATCAAACACG
AGCGCACCCCGCCGTATACGCCTCAGTACAACGGGGTAGCGGAGCGGACC
CTGGGTCTTCTTCGTGATAAAACCGTCGCCCTGCTACAAGGAGTGACGGA
GGGAGCGAGCGAACGTCTATGGGCGGAAGCGATGGCGTACGCCTGCGATA
TGTCCAACAAATGCGTCACAGATTCGCTCGATCACGACAAGACACCGTAC
GAGATGTGGCATGGTCGGCCAACCACGTTCGACACCCTGTTACCGTTCGG
TACCGTGGGCTACCGGCGCGTGGAAAAGCCGGCGCACAAGCTGGCTTCGC
GCGGGGCCAAGTGCATTCTCCTAGGTACTGCTGGTCCTCATGACGTCAAC
GATCATCATGACACCGGATCCAACTGGTTTTGAAAGATACGAGACTGCAC
CCCCGGGGCGCACAGTGGAGATGGGCGACGGAACGCTCCTCCCGGTGGCG
GGCTACGGAGGCCTTCGTCTAAAGATAGAACAAGACGACGCGGACGGTGG
CCAGACGCGCGATCTTATGCTCAGGCGCACGGCACACGTGCCGGGCCTTA
GACACAACCTGCTCTCGGCGGCGCAACTGTCGGCGACGTTCGAGCATCCG
ATGCAGCTGTGGCCACGGGCCGCTGTTTTTAGGTGCCCGCGCGACAGAAA
ATCTGTGATGTTTAGAAAATCCGCGCGGCGCTTGTTTGAGGCAACGGCAC
GCCGGAGCGTAAAGCAGGACTCAGGAAAGTCGCTGGTAGCGGCTAAACCA
ATGAGCTGTGGCATAATGATGTTCCACCAACTGGTTGCTCACCCTGGAGA
GGACATCACGCGTCGAACAGCCCAGGTGGCAGGACTGCGGCTGACCGGAA
AGTGGAATGCGTGCGAAAAGTGCTCCGAGGCTCGGGTCATGAGGCATGCA
GTACCCAAGTCTACAGAGACTCGGGCGGACAAGCGTGCCGGAAGAGTATT
CATCGACCTGGCCGGACCATTCCACGTGGAGAGCTTGGCGGGGAGCCGAT
TCGCGATGTTGTGCGTGGATGACTTCTCACGGTACAAGATTGTCGCGTTC
ATGGCCAAAAAGAGTGACGTCACGGCGGTACTTAGGGCGATCATCGCCAG
GTACTTCGCGTCCGCCGGACTAAATATTGGCGTCATCCGGACTGACAACG
GCAGGGAGTTCCAAGGGGCGTTTCAGTCACTCCTCGCCGAGCTGGGCATC
AAACACGAGCGCACCCCGCCGTATACGCCTCAGTACAACGGGGTAGCGGA
GCGGACCCTGGGTCTTCTTCGTGATAAAACCGTCGCCCTGCTACAAGGAG
TGACGGAGGGAGCGAGCGAACGTCTATGGGCGGAAGCGATGGCGTACGCC
TGCGATATGTCCAACAAATGCGTCACAGATTCGCTCGATCACGACAAGAC
ACCGTACGAGATGTGGCATGGTCGGCCAACCACGTTCGACACCCTGTTAC
CGTTCGGTACCGTGGGCTACCGGCGCGTGGAAAAGCCGGCGCACAAGCTG
GCTTCGCGCGGGGCCAAGTGCATTCTCCTAGGTACTGCTGGTCCTCATGA
CGTCAACGATCATCGGGGGGGGCATTCCCCTCGCCGCGGCGACTGGGGGG
GGGTGAAGGGCGATAAAAACCATTCGCCGCACCTCGAGGATCACGCGGTT
CGCACGGAGGCGCTGGAAGCGGAAGTAGGGTCGGAGAAGCAGGTGGCGTC
GGAGGAGTTACGGAATATACCGGAGGACTTCCCCCTGAAGCCGGAACTAC
CGGAAGAGCTGCTAGAGCCTCCAAAGCTTCCGGAGATGCGAGCAGATGTT
GATGAGCCAGCGACAGGGTTGGGAAGACTCGAGGATGAGGAGTCGGAACC
GGACTGGCAGGCCGAGCAGCGGGACGCGCCGGCTGCTTTAAGGAAGCTCC
GTAACGCATTCACGGGTGATTTACACCCCATCCTACCCAGCCGGGGGGGG
CATTCCCCTCGCCGCGGCGACTGGGGGGGGGTGAAGGGCGATAAAAACCA
TTCGCCGCACCTCGAGGATCACGCGGTTCGCACGGAGGCGCTGGAAGCGG
AAGTAGGGTCGGAGAAGCAGGTGGCGTCGGAGGAGTTACGGAATATACCG
GAGGACTTCCCCCTGAAGCCGGAACTACCGGAAGAGCTGCTAGAGCCTCC
AAAGCTTCCGGAGATGCGAGCAGATGTTGATGAGCCAGCGACAGGGTTGG
GAAGACTCGAGGATGAGGAGTCGGAACCGGACTGGCAGGCCGAGCAGCGG
GACGCGCCGGCTGCTTTAAGGAAGCTCCGTAACGCATTCACGGGTGATTT
ACACCCCATCCTACCCAGCCCGGCATCGACGATGCCGACTGGTCTCGCGA
GCTACCTACCGGACGAGCCCACCACCCTGCACGAAGCGAAGATGTCCTCC
GAGTGGCCGCAATGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCCAGAT
TGCGCGTGGTGTGTGGAAGGTCGTCGATCGACCCCAAGGAAAAACCGTAC
TCGGCACCAAGACTGTTTTTAAACGGAAGGTCGGCCTGAATGGCCGTGTA
GAAAAATAACGGCATCGACGATGCCGACTGGTCTCGCGAGCTACCTACCG
GACGAGCCCACCACCCTGCACGAAGCGAAGATGTCCTCCGAGTGGCCGCA
ATGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCCAGATTGCGCGTGGTG
TGTGGAAGGTCGTCGATCGACCCCAAGGAAAAACCGTACTCGGCACCAAG
ACTGTTTTTAAACGGAAGGTCGGCCTGAATGGCCGTGTAGAAAAATAA
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