mRNA_F-serratus_M_contig1083.781.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1083.781.1
Unique NamemRNA_F-serratus_M_contig1083.781.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: D7G8K1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K1_ECTSI)

HSP 1 Score: 478 bits (1230), Expect = 7.400e-153
Identity = 294/586 (50.17%), Postives = 347/586 (59.22%), Query Frame = 2 
Query:  368 GNAEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNGLAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCSLLPG---DTLFERRKARLRASGQHTFRKVRIRRGQWSSDLLQFNRCACLAVSELNQLEA----QEDARSADHPSQAH-----------------PGADVAQ-ARKVI---------------GSARQTVTYAASES-------FCSRPGADF-----GDERT--------AKGMRLPLDEEDACGS--------------------------------QLGSDEPCYSNASRG--FPGGALSVENELAALTEIVVQLLEARDIFPTKLESDERLIREV--NGDAFPELLNALKYRVTIKRILAEHLGLAERAIAFVQDI 1837
            G    EQ F  WLR +GA    V+WPS +T   VRGAVARRDIA  +HMV+IPH LM+S FHA+ADP  GHV+R    LL SDNGLA+YIMQE+LK E SFYWPYLR+LP P NLR+W+   LL LQ+ ++ R  A R+RQL  LYR+T+E LS+SYP L+   RYTFELFDFAW T+QARAFG+RLK SALVPFADCLNHGNVQTKYDFDV GNG FRLFP+G N YP+ +EVLNSYGRRAND LLLDYGF MLDN WDAAEV CSL P      L  RRKA LRASGQHT R +R+RR  W  +LL+F RCACL   EL+ LEA    Q    S   PS A                  P  D+ + AR+                 GS  +T T  A+ +        C +   D      GD+ T        A    LPL +E   GS                                + G D P  +  + G  FP  AL+ +NE+AALTE V  L +ARD +PT LE DE   RE   + D+ PEL  AL YRVT+KRILA  L +AE A AFVQ+I
Sbjct:   15 GEVREEQEFLRWLRSHGAAIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTAARSRQLLALYRETIEFLSSSYPELYTADRYTFELFDFAWRTIQARAFGKRLKSSALVPFADCLNHGNVQTKYDFDVGGNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDAAEVICSLPPSHDQSPLDRRRKACLRASGQHTVRILRVRRDVWPEELLRFCRCACLTAPELDNLEALGGQQARMASQSRPSGAMRPRGIAGTVEPTAAAVPPYQDLCRCARRSSKQATRGRAECGSGSGGSGDRTATGGATAAPLSSSLPSCEKAREDTINNNNGDDDTLREGLSVHASKCTLPLRDEHEEGSGDRGDRGAGAGAKEEGQEDGDVPSGAGGAGEKRGGVDSPDENPDASGCRFPCRALTAQNEVAALTEAVKYLAQARDNYPTTLEHDENAYREARTSPDSSPELATALIYRVTVKRILARQLEMAEAANAFVQNI 600
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: A0A6H5JC99_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC99_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 9.240e-129
Identity = 262/571 (45.88%), Postives = 310/571 (54.29%), Query Frame = 2 
Query:  368 GNAEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNGLAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHR----------------------------YTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCSLLPG---DTLFERRKARLRASGQHTFRKVRIRRGQWSSDLLQFNRCACLAVSELNQLEAQEDARSADHPSQAHPGADVAQARKVIG--------------------------------------------SARQTVTYAASESF--CSRPGAD-------FGDERT--------AKGMRLPLDEEDACGS--------------------------------QLGSDEPCYSNASRG--FPGGALSVENELAALTEIVVQLLEARDIFPTKLESDE 1702
            G    EQ F  WLR +GA    V+WPS +T   VRGAVARRDIA  +HMV+IPH LM+S FHA+ADP  GHV+R    LL SDNGLA+YIMQE+LK E SFYWPYLR+LP P NLR+W+   LL LQ+ ++ R  A R RQL  LYR+T+E LS+SYP L+   R                            YTFELFDFAW+T+QARAFG+RLK SALVPFADCLNHGNVQTKYDFDVE NG FRLFP+G N YP+ +EVLNSYGRRAND LLLDYGF MLDN WD AEVTC L P      L  RRKA L ASGQHT R +R+ R  W  +LL+F RCACL   EL+ LEA+   + A   SQ+ P  D  + R + G                                            S R T     S S   C +   D        GD+ T        A    LPL +E   G+                                + G D P  +  + G  FP  AL+ +NE+AALTE V  L +ARD +PT LE DE
Sbjct:   15 GAVSEEQEFLRWLRSHGAVIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTAARGRQLLALYRETIEFLSSSYPDLYTVSRRFDFWHPESRLLRLRVWCIYPCAPCADRYTFELFDFAWTTIQARAFGKRLKSSALVPFADCLNHGNVQTKYDFDVERNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDTAEVTCFLPPSHGQSPLDRRRKACLLASGQHTVRMLRVHRDVWPEELLRFCRCACLTAPELDNLEAR-GGQQATMASQSTPS-DAMRQRGIAGTVEPTAAAVPPYQDLCRCALRSSKQATRGKAEGGSGXXXXXDRTSTRGTTAAPPSSSLPSCGKAREDTINNNHNIGDDDTLREGLSVHASKCTLPLRDEHEEGNGDRGDRGAGAGAEEEGXXXXXXXXXXXXXXXKRGGVDSPDENLDASGCRFPCRALTAQNEVAALTEAVKYLAQARDNYPTTLEYDE 583
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: A0A8K1FF70_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF70_PYTOL)

HSP 1 Score: 267 bits (682), Expect = 7.340e-77
Identity = 136/269 (50.56%), Postives = 178/269 (66.17%), Query Frame = 2 
Query:  383 EQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCSLLPGDT 1186
            E+ F  WL DNGA F  ++WP     G +RGA+AR +I   E M+ IP  LM+S     ADP    VY E   +   D+  +A+++++E LKGE SFY PYL ILP   N++ WS+ +L EL++  +A  AA R+ +++  Y   ME+L   YPG FP ++YTF+ F FAW ++QAR FGRRL  ++LVPFADCLNH NV TKYDFDV+GNG FRLFP+ +N Y +G EV NSYGRR N  LLLDYGF + DN W+  EV+   LP DT
Sbjct:    6 EERFVQWLLDNGASFPKLEWPVLTENG-LRGAIAREEIHPNEAMLTIPQRLMISEATCWADPQLRRVYEENRDVFARDDPVIALFLVREKLKGEESFYHPYLAILPEVINVQDWSKEELEELRDSSLAEAAARRSTEVQTFYDGIMELLDEKYPGEFPRNQYTFDRFRFAWKSIQARTFGRRLPWTSLVPFADCLNHSNVATKYDFDVDGNGSFRLFPSASNSYAKGAEVFNSYGRRPNFQLLLDYGFALEDNEWEYVEVS---LPRDT 270
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: A0A836CPE3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE3_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.100e-75
Identity = 133/264 (50.38%), Postives = 167/264 (63.26%), Query Frame = 2 
Query:  392 FTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAP-LLKSDNGLAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTN----CYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCS 1168
            F  WLR+NGA +  ++WPS  TA   RGA+A  DIA  E  + +P   ML+   A+  P  G V+  +A  LL+ D  LA+Y+M E+L+G++SFY PYL +LP P     W    +  LQ+ R+A  A  R+RQL   +  TM  L+ SYPG+FP   YT  L+  AW  ++ARAFGRRL  SALVP ADCLNHGNV TKYDFD  GNGVFRL+P+G        P+G E LNSYGRR+N  LLL+YGF MLDN WD   V  S
Sbjct:    2 FLQWLRENGATWDKLEWPSYATASGSRGAIATADIAPGEPFLCVPERCMLTPPQAQRLPCVGPVFAAEAEGLLRGDAALALYVMHELLRGDASFYAPYLAVLPAPHTAEDWDATAVAVLQDERLAASADARSRQLTRAWERTMSALAASYPGMFPRETYTLALWRRAWGVIRARAFGRRLPWSALVPLADCLNHGNVPTKYDFDAGGNGVFRLWPSGGGSASVAVPRGCEALNSYGRRSNAHLLLEYGFAMLDNEWDEVAVPLS 265
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: A0A225UML7_9STRA (SET domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UML7_9STRA)

HSP 1 Score: 260 bits (664), Expect = 7.810e-75
Identity = 131/263 (49.81%), Postives = 170/263 (64.64%), Query Frame = 2 
Query:  383 EQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCS 1168
            EQ F  WLRDNGA F  + WP+    G +RGAVA  DIAT E M+ +P  L++S      DP    VYR+   +   D+  L ++IM+E++ GE SF+ PYL ILP P +++ W+  +L EL + R+   AA R+ ++ + Y   M  L   YPG FP   YT + F FAW T+QAR FGRRL  +ALVPFADCLNH NV TKYDFDV+ NG+FRL+P+ + C+ +G EV NSYGRRAN  LLLDYGF + DN WD  +V  S
Sbjct:   12 EQRFLQWLRDNGATFPKLQWPTTTPNG-LRGAVALEDIATDEPMICVPRSLLISEHLCWQDPQLQCVYRDNRDVFTRDDPVLTLFIMRELVLGERSFFHPYLSILPYPESVQDWNVDELRELHDDRLVAAAARRSSEINVYYDRVMTRLQQKYPGEFPETLYTLDKFRFAWKTIQARTFGRRLPWTALVPFADCLNHSNVATKYDFDVDENGMFRLYPSSSTCFAKGEEVFNSYGRRANFQLLLDYGFALPDNEWDYVDVEIS 273
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: G4ZIF2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZIF2_PHYSP)

HSP 1 Score: 254 bits (650), Expect = 3.710e-72
Identity = 127/263 (48.29%), Postives = 169/263 (64.26%), Query Frame = 2 
Query:  374 AEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEV 1159
            A  EQ F  WLRDNGA F  + WP     G +RG VA   +A+ E M+ IP  L++S      DP  G V+++   +   D+  LA+++++E+L  + SF+ PYL +LP P +++ W++ +L EL + R+   AA RT ++ + YR  M  L   YPG FP   YTF+ F FAW T+QAR FGRRL  +ALVPFADCLNH NV TKYDFDV  NG+FRL+P+G   + QG EV NSYGRR+N  LLLDYGF + DN WD  +V
Sbjct:    8 AAAEQRFLQWLRDNGATFPKLQWPVTSPNG-LRGTVAAAAVASGEPMLCIPRRLLISEDLCWRDPQLGRVFQDNRDVFTRDDPVLALFLVRELLLADRSFFHPYLAVLPYPESVQDWTQAELGELHDERLVDAAARRTSEIDVYYRRVMVRLQTKYPGEFPEALYTFDRFKFAWKTIQARTFGRRLPWTALVPFADCLNHTNVATKYDFDVNDNGLFRLYPSGATSFAQGAEVFNSYGRRSNFQLLLDYGFALPDNEWDYVDV 269
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: W2Z914_PHYPR (SET domain-containing protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2Z914_PHYPR)

HSP 1 Score: 253 bits (645), Expect = 5.620e-72
Identity = 127/263 (48.29%), Postives = 168/263 (63.88%), Query Frame = 2 
Query:  374 AEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEV 1159
            A  E  F  WLRDNGA F  ++WP     G +RGAVA   I T E M+ IP  L++S      DP  G V+R+   +   D+  +A++I++E+L  ESSF+ PYL ILP P +++ W+  +L EL + R+   AA R+ ++ + YR  +  L   YPG FP   YTF+ F FAW T+QAR FGRRL  +ALVPFADCLNH NV TKYDFDV  NG+FRL+P+    + +G EV NSYGRR+N  L+LDYGF + DN WD  +V
Sbjct:    2 ASAELRFLQWLRDNGATFPKLEWPVTTPNG-LRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILPYPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVLTRLQEKYPGEFPETLYTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNGLFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDV 263
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: A0A2P4WWD4_9STRA (SET domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWD4_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.500e-71
Identity = 130/266 (48.87%), Postives = 169/266 (63.53%), Query Frame = 2 
Query:  374 AEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCS 1168
            A  EQ F  WL DNGA F  + WP+  + G +RGAVA  DIA  E M+ IP  L++S      DP    V+ +   +   D+  LA++I++E+L  E SF+ PYL ILP P +++ WS  +L EL + R+   AA R+ ++ + YR  M  L   YP  FP   YT + F FAW T+QAR FGRRL  +ALVPFADCLNH NV TKYDFDV  NG+FRL+P+ + C+ +GTEV NSYGRR+N  LLLDYGF + DN WD  +V  S
Sbjct:    2 ATPEQRFLQWLHDNGATFPKLQWPTTTSNG-LRGAVAIEDIAMDELMLCIPRRLLISEELCWQDPQLKPVFLDNRDVFTRDDPVLALFIVRELLLEERSFFHPYLAILPYPESIQDWSLNELQELHDNRLVDAAARRSSEIDVYYRKVMTRLQEKYPDEFPETLYTLDKFRFAWKTIQARTFGRRLPWTALVPFADCLNHSNVATKYDFDVNDNGMFRLYPSASTCFAKGTEVFNSYGRRSNFQLLLDYGFALTDNEWDYVDVEIS 266
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: A0A662YJE2_9STRA (SET domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJE2_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.960e-71
Identity = 130/270 (48.15%), Postives = 172/270 (63.70%), Query Frame = 2 
Query:  353 TTTTTGNAEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEV 1159
            TTTTT     E+ F  WL DNGA F  + WP     G +RGA A +DIAT EHM+ IP  L++S      DP    V+ +   +   D+  LA+++++EM+ GE SF+ PYL  LP P +++ W+E +   L++ R+   A  R+ ++ + YR     L + YPG FP   YTF+ F FAW T+QAR FGRRL  +ALVPFADCLNH N+ TKYDFDV+GNG+FRLFP+ +  +   TEV NSYGRRAN  LLLDYGF + DN WD  +V
Sbjct:    2 TTTTTPE---ERRFLQWLTDNGAVFPKLAWPVATPNG-LRGATATQDIATGEHMLCIPRQLLISEELCWRDPQLRRVFEDNRDVFARDDPVLALFVVREMVLGEGSFFHPYLSTLPYPESVQDWTEDERRALRDKRLEEAAVRRSVEIEVHYRRVFARLHDKYPGEFPEELYTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHSNLATKYDFDVDGNGLFRLFPSASTSFAAHTEVFNSYGRRANFHLLLDYGFALPDNEWDYVDV 267
[Close]
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Match: W2Q7U8_PHYPN (SET domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q7U8_PHYPN)

HSP 1 Score: 251 bits (641), Expect = 5.800e-71
Identity = 126/263 (47.91%), Postives = 167/263 (63.50%), Query Frame = 2 
Query:  374 AEIEQNFTDWLRDNGAEFGGVDWPSRDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKAPLLKSDNG-LAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQEPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWSTLQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNCYPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEV 1159
            A  E  F  WLRDNGA F  ++WP     G +RGAVA   I T E M+ IP  L++S      DP  G V+R+   +   D+  + ++I++E+L  ESSF+ PYL ILP P +++ W+  +L EL + R+   AA R+ ++ + YR  +  L   YPG FP   YTF+ F FAW T+QAR FGRRL  +ALVPFADCLNH NV TKYDFDV  NG+FRL+P+    + +G EV NSYGRR+N  L+LDYGF + DN WD  +V
Sbjct:    2 ASAELRFLQWLRDNGATFPKLEWPVTTPNG-LRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMVLFIVRELLLKESSFFHPYLSILPYPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVLTRLQEKYPGEFPETLYTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNGLFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDV 263
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1083.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8K1_ECTSI7.400e-15350.17SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JC99_9PHAE9.240e-12945.88SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8K1FF70_PYTOL7.340e-7750.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A836CPE3_9STRA4.100e-7550.38Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A225UML7_9STRA7.810e-7549.81SET domain-containing protein (Fragment) n=1 Tax=P... [more]
G4ZIF2_PHYSP3.710e-7248.29Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W2Z914_PHYPR5.620e-7248.29SET domain-containing protein n=1 Tax=Phytophthora... [more]
A0A2P4WWD4_9STRA3.500e-7148.87SET domain-containing protein n=1 Tax=Phytophthora... [more]
A0A662YJE2_9STRA4.960e-7148.15SET domain-containing protein n=2 Tax=Nothophytoph... [more]
W2Q7U8_PHYPN5.800e-7147.91SET domain-containing protein n=8 Tax=Phytophthora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1083contigF-serratus_M_contig1083:246344..254800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score480.7
Seed ortholog evalue1e-132
Seed eggNOG ortholog2880.D7G8K1
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-lysine monomethylation
EggNOG OGsKOG1337@1,KOG1337@2759
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-14_003300.1
EC2.1.1.43
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons7
Model size2908
Cds size1905
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928933.3840191-UTR-F-serratus_M_contig1083:246343..2466411622928933.3840191-UTR-F-serratus_M_contig1083:246343..246641Fucus serratus maleUTRF-serratus_M_contig1083 246344..246641 +
1690962635.2952478-UTR-F-serratus_M_contig1083:246343..2466411690962635.2952478-UTR-F-serratus_M_contig1083:246343..246641Fucus serratus maleUTRF-serratus_M_contig1083 246344..246641 +
1622928933.5255783-UTR-F-serratus_M_contig1083:254095..2548001622928933.5255783-UTR-F-serratus_M_contig1083:254095..254800Fucus serratus maleUTRF-serratus_M_contig1083 254096..254800 +
1690962635.3902228-UTR-F-serratus_M_contig1083:254095..2548001690962635.3902228-UTR-F-serratus_M_contig1083:254095..254800Fucus serratus maleUTRF-serratus_M_contig1083 254096..254800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928933.4114118-CDS-F-serratus_M_contig1083:246641..2468481622928933.4114118-CDS-F-serratus_M_contig1083:246641..246848Fucus serratus maleCDSF-serratus_M_contig1083 246642..246848 +
1690962635.31964-CDS-F-serratus_M_contig1083:246641..2468481690962635.31964-CDS-F-serratus_M_contig1083:246641..246848Fucus serratus maleCDSF-serratus_M_contig1083 246642..246848 +
1622928933.4248796-CDS-F-serratus_M_contig1083:247466..2478141622928933.4248796-CDS-F-serratus_M_contig1083:247466..247814Fucus serratus maleCDSF-serratus_M_contig1083 247467..247814 +
1690962635.3346431-CDS-F-serratus_M_contig1083:247466..2478141690962635.3346431-CDS-F-serratus_M_contig1083:247466..247814Fucus serratus maleCDSF-serratus_M_contig1083 247467..247814 +
1622928933.4352822-CDS-F-serratus_M_contig1083:249918..2500521622928933.4352822-CDS-F-serratus_M_contig1083:249918..250052Fucus serratus maleCDSF-serratus_M_contig1083 249919..250052 +
1690962635.3448231-CDS-F-serratus_M_contig1083:249918..2500521690962635.3448231-CDS-F-serratus_M_contig1083:249918..250052Fucus serratus maleCDSF-serratus_M_contig1083 249919..250052 +
1622928933.468055-CDS-F-serratus_M_contig1083:251536..2517881622928933.468055-CDS-F-serratus_M_contig1083:251536..251788Fucus serratus maleCDSF-serratus_M_contig1083 251537..251788 +
1690962635.355524-CDS-F-serratus_M_contig1083:251536..2517881690962635.355524-CDS-F-serratus_M_contig1083:251536..251788Fucus serratus maleCDSF-serratus_M_contig1083 251537..251788 +
1622928933.4817734-CDS-F-serratus_M_contig1083:252173..2526361622928933.4817734-CDS-F-serratus_M_contig1083:252173..252636Fucus serratus maleCDSF-serratus_M_contig1083 252174..252636 +
1690962635.3636656-CDS-F-serratus_M_contig1083:252173..2526361690962635.3636656-CDS-F-serratus_M_contig1083:252173..252636Fucus serratus maleCDSF-serratus_M_contig1083 252174..252636 +
1622928933.4976943-CDS-F-serratus_M_contig1083:253124..2532531622928933.4976943-CDS-F-serratus_M_contig1083:253124..253253Fucus serratus maleCDSF-serratus_M_contig1083 253125..253253 +
1690962635.3724616-CDS-F-serratus_M_contig1083:253124..2532531690962635.3724616-CDS-F-serratus_M_contig1083:253124..253253Fucus serratus maleCDSF-serratus_M_contig1083 253125..253253 +
1622928933.510197-CDS-F-serratus_M_contig1083:253723..2540951622928933.510197-CDS-F-serratus_M_contig1083:253723..254095Fucus serratus maleCDSF-serratus_M_contig1083 253724..254095 +
1690962635.3813174-CDS-F-serratus_M_contig1083:253723..2540951690962635.3813174-CDS-F-serratus_M_contig1083:253723..254095Fucus serratus maleCDSF-serratus_M_contig1083 253724..254095 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1083.781.1prot_F-serratus_M_contig1083.781.1Fucus serratus malepolypeptideF-serratus_M_contig1083 246642..254095 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1083.781.1

>prot_F-serratus_M_contig1083.781.1 ID=prot_F-serratus_M_contig1083.781.1|Name=mRNA_F-serratus_M_contig1083.781.1|organism=Fucus serratus male|type=polypeptide|length=635bp
MDAVLAQVHAIHDDGVNTTTTTTGNAEIEQNFTDWLRDNGAEFGGVDWPS
RDTAGRVRGAVARRDIATWEHMVVIPHHLMLSVFHARADPDTGHVYREKA
PLLKSDNGLAIYIMQEMLKGESSFYWPYLRILPVPSNLRHWSEPDLLELQ
EPRVARWAATRTRQLRMLYRDTMEVLSNSYPGLFPTHRYTFELFDFAWST
LQARAFGRRLKCSALVPFADCLNHGNVQTKYDFDVEGNGVFRLFPTGTNC
YPQGTEVLNSYGRRANDILLLDYGFTMLDNPWDAAEVTCSLLPGDTLFER
RKARLRASGQHTFRKVRIRRGQWSSDLLQFNRCACLAVSELNQLEAQEDA
RSADHPSQAHPGADVAQARKVIGSARQTVTYAASESFCSRPGADFGDERT
AKGMRLPLDEEDACGSQLGSDEPCYSNASRGFPGGALSVENELAALTEIV
VQLLEARDIFPTKLESDERLIREVNGDAFPELLNALKYRVTIKRILAEHL
GLAERAIAFVQDIKQELESICDATVDHGNTKTDTWDVPTHPVQDDDHVPI
SFKTYLEDLRGRFLALRAPSSATPGGMDGGFGCETRRLETASFCAARVLV
DDSASVSSASTGMCSRSAAGDSRPKMPATSSVPV*
back to top

mRNA from alignment at F-serratus_M_contig1083:246344..254800+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1083.781.1 ID=mRNA_F-serratus_M_contig1083.781.1|Name=mRNA_F-serratus_M_contig1083.781.1|organism=Fucus serratus male|type=mRNA|length=8457bp|location=Sequence derived from alignment at F-serratus_M_contig1083:246344..254800+ (Fucus serratus male)
TCTGTGGCAATATTTGTACCATAAAAAAGGAGTGTACAACTGTAGTAGTA
CTACTACTACTGTACTACTGTACAAAGTACTGCTGTATGTAGTGCTCGTG
GCAATATTTGCACTTGTGCCCTTTAGGGAGCATATTTCATAAATCTTGAC
CTTGACCGGGAAGCGGGCGGGTGTGCACTTATTTATCATATCTGAGTGGG
ACTCGCCAATATCTATTGTGCCCTCGGTGGGTACACTTAAACCGAGCCCC
GCTTTGATTATTGCGCTCGCCGCTCCTCGTCAAAGGCGGCTGAGTATCAT
GGATGCCGTTCTTGCCCAAGTGCATGCGATCCATGACGACGGCGTGAACA
CAACAACAACAACAACAGGAAACGCGGAGATTGAACAAAATTTCACCGAT
TGGCTTCGTGATAACGGCGCCGAGTTCGGCGGCGTCGACTGGCCCTCGCG
CGACACGGCTGGTAGAGTGCGCGGTGCTGTAGCCCGCCGAGATATCGCGA
CCTGGGTGAGTGAGATCTTTATATTTTTGGCTGTCACAGACAGTGGGATG
CTTTTGCTTTTTTTAATAGTCCAGCTCGAAGATGAAACAGACATCGCGTT
TGATTCAGCTCTACAAAGTTGCTGGATCTCAAGTCAAGTAAGTAGAACAC
TGCATACAGAAGTACAACACCGAATTGCACAGTACAGTACCATAGTACAG
TAGTATTATAGTAGTGCGAGTAGTTTTACAGCACAGGTTATATACGAAAA
CTGAACAACTGCAACACTCCTACAGAGTAGTATGCTATACTTTATTGTAA
TCTAAGCGACGAGGGTACTACGGTACCGTATTTGAATACGATTTGGTACT
GTAATTATTGAATGTGCGCAGCGTATGTACATCTATCTCGTGGTCGCTGA
TTTTATATTTCCACTCCCCCCCGTGGGAGTTGTTGTACAGTACAGTACTA
CAGCAGGTACAAAATGTAGTAAAAGGAGCAGAGTTGTCATCGAGCGGCCA
CAATTCGACAAACTTGTTGGTTATCAACGATGATCGGACGGATCTCTTCT
TCGAATGCTCCACGCCTTTACCTCGTCCTTTAATTTTCCCCCTTCAACGC
ACGGACACTCCCAACGCAACCAGGAACATATGGTGGTCATCCCGCACCAC
CTCATGCTTTCCGTGTTCCATGCAAGGGCCGACCCCGACACAGGCCACGT
CTACAGGGAGAAAGCCCCCTTACTCAAGAGTGATAACGGCCTCGCCATAT
ACATCATGCAGGAGATGCTCAAGGGCGAGAGCTCCTTCTACTGGCCATAC
TTGAGAATTCTGCCAGTGCCCTCTAATCTACGGCATTGGAGCGAGCCTGA
TCTGCTCGAGCTTCAGGAGCCGAGAGTAGCCCGCTGGGCTGCTACCAGGA
CGCGCCAGCTCCGCATGCTGTACCGCGATACAATGGAGGTGTTATCGAAT
TCCTACCCAGGGCTGTTTCCGGTGAGCGCCGCGGTAGCCAGATCGGACGG
GCGCGCGTTCGAATTCTTGAGGCAGTTCACGTGCTCCAAAGAAAAAAAAG
CCCTCTGTTGTGCCGTCTACCGTTCATGATGCGGAACGAATAAAATGAAC
GAAGGGTTCTGCACTCTAATATGTAGTATGTAGTATGAACTGCAGTTACA
CGAAGGATCAACTGCAACTACTCGATGTATACTACTGACTGTACCTCTGG
TACTACTGTAGTGTACCTGTTGTATCCGTACGAGAGCAGCAACGATCACC
CTGTACTGTACAGGCAGGACTACTGTTGTCTACGTCATTCGCCTGAAAGC
GAGAAATCGACCCATCTAGGTGTGGTGTATTGATGAATGGTCTACAGTAG
CTTCAGAGCGACTTACGATTTTTGAACGAGTCACGAGTGAAAGACACGAC
CCATACTTGCACCGCGTACACTTCCTGCTTCAGTGCAAGTTTTTGTACCG
AATGCTACAAAAGCAACTTGCCCTTCCTCCAAAACTTTCAACATGCCCAC
CTCATACGCCACCAAGTAGTGGGTGTGGGCAAAGTGAGGCGCACATTAAT
TGCGATCGGTCTACAGTGATACATAGGCAGCACCCGTTACCGGGACTACC
TTGAGGTTTACTGGCCCGGTGCCGGTGGACTCTTGGCAGTGAACGCCATC
GGCCCGCAATGTGGTGAACCGATACACTCGGTACTGACCCGATGGCGTAT
GGCGGTTTAAATAAATAAATGGCCGCCGCCGCGGAAATCGGGAAAAAATT
CCGCGAGTAGCGCCAGATTCAGCCTGAGTAAAGGGAATAAGCAGGCTGGC
GTGGGATGGTACGGCCGAACCCGTCTCGCGAGACCATTTTTTCAGGCGTT
AACGGGGACGGCAGGGAAAAAATATCCATTTTCCTGTTCAGCTGACCACG
AGCAGGATTGGCACCTTTATCCGGTGATGATTATACATACATACATACAT
AAATATACATACATACATACATACATACATGCAGCACATAGGTAAATGGA
TTCAGTCATTTAGTCATAACTTACTGCAGAGTACTGGTATGGATCAACCA
TCACCGGGTAAAGTTGCCAATCTTACTCGTGGTCAGCTGAACAGGGAAAA
TGGATATAATTTCCCTGCCGTTCCCGTTCGCACCTGAGAGTTTGGTCTCG
CGAGACGGGTTCGGCCGTCCCGTCTCACGTCAGCCCGCTCGTTCTCTACA
CTCAGCCTGAATGTGGTACACTACCTGGTATATAATAACAGCAGTAGTCG
TCGGCCTATAGTGGTACCGATACCTACGAGAAATGCTTAAAATTAATGAC
TCATTTTCAAAGGCAAAGGTTAGATGCAGGGTACAGCAATTGAGTGCATA
CTTGATGTTTGTCCGTAGTAGCCGAATGCGTCCGATTGACTGTCCGGCCG
AGAGTCGAGCGTTACTCTGTGATACGGAGTATATCTGATATTTTATTTCA
TTTTGATTTAAGCGAGAAAAAAATCCCGTTCACCGGGATTCGAACTCACG
TCCCACCGTGTCAGAAGGTTACGAGGTTATTTCTGAGCTACCGGGGCGAC
AAATACTGCCCTTATGCGCACAAACTTATACTACATCCAACGGCGATATT
CTGTCTCAAAACTTGAGCTCCGTGTCAATCAAGTACCATAAAGGTAAAGC
TCGAGATAAGGTTTCCCCCACAAACACAGACTCTTGTCGGAGATGGTGCT
TGCGAGTCAACAGGTCGTGCAAAATCTAACCTTTCAGTCTACTGGTATTC
AATAATAAAATAGACTCTATACAGTCAGTCGCTCAAAGCTCTACGTCCCT
TTCCCTGCGGTGGCAATGACAAAGTACCCTTTTGACCGCTCAAGAAAATC
CACATAATCTCTCCGACGTGGCTGCACCGAAGTCCATTTGGCGCCCTTCT
CGGAATCACAGCTTGCAATCTGACGCGATCGATGTAACCACGAACAGTCG
GTGGGTTCGGGCTGCACCCACACTCCCTATGCGGCCTTAGACGTATTTGA
TGAACGCAACGCTTTCTCGTGCCACCCGTTTCCGGATTTCCAAATTTCCA
AATCCTTGCCGTTTATCGCTGTCAGACTCACCGGTACACATTCGAGCTCT
TTGATTTCGCGTGGAGCACACTGCAAGCGAGGGCATTCGGGAGGCGACTA
AAATGCTCAGCGCTGGTGCCGTTCGCTGACTGCCTTAACCACGGAAACGT
CCAGACGAAGTGAGAGAAACTTAACTTCAACTACTACTGTGCCCAGGTAC
AAATAAGGTTGCCGTTGGTACAGTAGACTGTTCAACACCCCTTCTGCTCG
CCACTCATCAACCTGTAGTACCTCGTACTATCTCGTAGTGTAATGGTTAC
ACACACAGCAAGCGTATGGATCAACCTGGTAAGGTTGCCAATCGTGTTCG
TGGTCAGCTGAACAGGAAAAAAGAAGAATCCCCTGTCCGCGTTCGTACCT
GAGAATTTGGTCTCGCGAGACGGTTTCGGCAGTCCCGTCTTGCGTCAGCC
TGCTCATCTCCATACTACTCAGGCTGAATATGGTGCTTACTTACGGGATT
CCTCCCGAGTTCCGCGGCGGCATCCATATATTTATATTAAATCGCCATAC
GCCATTGGGTAAGTCCCGAGTTTATCGGGTCACGCAACTGCGAATCATCG
CAAAATTAAGGCACGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGT
GACCTTCCTCCCGTGTGACCCCCGGCTGGTACGTCCAACGAACGTCTGAT
CAGAGGTTTTCGTAGTATCATTGATCCGCCCTCGGGAGGATCAAAGCGAG
TGACATAAAATGACTATGACTAGGATGAGGCTGGATTGCGCGGTGATGTG
CAATTTAATAAACCACACACACACAGGCATATAATGATAATAGGATGACA
GGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATATATATAAATATAT
GTCTACCCTGGTCAAGAGTTTAGTTGTGGTAAGAAGAGGCTATTACGTTA
GTCCATCCATCTACGAAAAATACCGTTTTTTGTTTTGTTTTGTTTTTTTA
CTTTCATGTTTTGAACAAGTTGGTGGAGCCTTTGCCCACGCGATGAGTTA
GTTTCTTGAACCTTTGCTGAAGATTTTACACCGTCAAGATGTCACTATTA
TATTTTATTATGATACCAGTACCTGGTAGGAATACCGTCTAAACGGTTCT
CTCCTTTCTCTTTTGAGAAGTTGAAAAGTTGACAAGTTGGGTGGGGGTGG
CAATGTGTCCCGGAAGCGCCCCAAACGAAATGCAATGACGTCTGCAGCCC
GGTCGATATAGAAAACGAGAAATCAAAGGGACGCCAAACCCTTATAATTT
GTAGTCACATGATAGCGTAGCTATATAATCAACTTAAAATCAGCCGCAAC
CGAAAAGCACTCAGTCGGATGCAAAATACTTGATAGCGTCGTACCGGTAT
TTCCTTGATAGGCATTAATTGACATTGACATTGACATTGATTTTAATCAC
CTTGCCCACGAACACCCCAAACCATGCGGTCAGCGGTCAGCGATCAGCGG
TCAGCGGTGCATAACCCTGCGAATAGTAGTTGGGTTCAGTACAGTACATC
GTACGAAAAATGACATTCGAAAGCTGCGTGACACGCCTAAAACACCCCCG
CTTCGGACCCCCATCGTCATGCTGTACCTTACAACATTTGTAGGTACGAC
TTTGACGTCGAAGGCAACGGCGTCTTCCGGCTTTTCCCCACGGGGACGAA
TTGTTACCCACAGGGTACCGAGGTTCTCAATAGCTACGGACGACGAGCGA
ACGACATCCTTCTCCTCGATTACGGCTTCACGATGCTCGACAACCCTTGG
GACGCGGCTGAGGTCACCTGCTCCCTTCTACCCGGGGATACGCTATTCGA
ACGGAGGAAAGCGCGTTTGCGCGCCAGTGGGCAGCACACTTTCCGGTGAG
CGGCAGACCCGTTGCGTTTCGCTGTCGCAATGTTGATGGCATGGTACTTT
ATCAATAATAGTGCTGCAGTGTTCAAGTGCTGCCATAGTGCCCCCGACCG
GACTTGGCACGTAATACCGGTATTGCAGAATAACAGTAATATTATTTGTA
TATTAGTGATACCATACCATATATATTTCTTGTTTCAAACAGCGAGCGAT
CAAAACAAGAAGGGCTGCAGCCGAGGAATACATACATGCATACATACATA
CATACATCCATACATACATACATACATACAAACTCGAGATGAATGTTATA
TCCCGTAGAAGACTTGTTGATGCATCGTGCCTTCTGTCGACACCGTTCGC
CCTGCGTCATCACCCGCCGGCCGGCCTTAGAAAAGTACGCATCCGCCGGG
GGCAGTGGTCCTCGGACCTTCTGCAATTTAATCGCTGCGCGTGCCTGGCG
GTTTCTGAGCTGAACCAGCTGGAAGCTCAAGAAGATGCACGAAGCGCCGA
CCATCCGAGCCAGGCTCATCCGGGCGCCGACGTTGCCCAAGCCAGGAAGG
TCATAGGCAGTGCCCGGCAGACGGTGACATACGCAGCGAGCGAATCGTTT
TGTTCACGCCCAGGGGCGGACTTCGGCGACGAACGTACTGCTAAGGGAAT
GCGTCTTCCTCTCGATGAAGAAGACGCTTGTGGTTCTCAACTAGGATCGG
ACGAGCCATGCTATTCCAACGCCTCGAGAGGATTTCCGGGCGGGGCTCTG
TCGGTCGAGAACGAGCTGGCGGCGTTGACAGAAATCGTGGTGCAACTGCT
GGAGGCCAGGGATATCTTCCCCACCAAACTTGAGAGCGACGAGGCACGAC
TGATGATTTCAAATTAAAATTAAATGAGCTCAGACAAATCGTTATATTTC
ATTTCATCAATTATGATATGATATATGGGAGGGGGGGCGGGAAGGGGAGG
GAGGCGAGGAGAGGGCGTATCCGGCGCTCTTTGGCATTTTTTTTTTCTGT
CTCTCGATACGTCTTGTTTCCACAAAATGTAAACTGCGCAGGACATGAGT
CGACCCTACTTGAGAAGTGAAGCGGACGCGGACGCGGAGGCCTTCTTGTA
GACTTTTCAAACTCCGCATACTCATCACTTCATAGTTTCCACGGTCTAAG
TCTGGGTCGGGGCTGGTACGTTGTGGAATGCCTCGACAAAGCCTTCGAAC
ACCTTCGTCCCTTAGGCCTCGTCCGCGTGAAACACCCAATGGCCCAATGG
CCGACGCACATCCCCTCGCTCCCCTCAAAGAGCACTTCGTGTTCCGGCAA
ACTGTATGCCAACGCTATGAATCTTGAGCAGAGATTGATCCGAGAGGTCA
ATGGCGACGCGTTCCCCGAGCTGCTGAACGCCTTGAAGTACCGCGTCACA
ATAAAGCGCATTTTGGCCGAGCATTTAGGTCTGGCCGAACGAGCCATCGC
TTTTGTGCAGGTAGGAGACGGGCAAGTTTTTACCTTCCAGTGAAGACTTC
AAATCGTTCCACGCGCCCCGTGAATTTTTAAGTTGCATCTTAAGTCGTAT
CTTTCGGCGGCGATTCCAGAACACAAAACGTATTGAAGAAATCCAAATCC
AAGGGCCTCGAGTGGGATACAAGACGGATACTGTATTCAAGAATAACGTC
GAGGGCCGGCACATTCCGATGCGATCCAGACACATATGAATGACACAATC
GTGTAGCAGTATGCTGACCCCGCGGTTTGATGTGGAGCTGGGGTATCGCG
GTGCACCTCGACATTACACATTCTAAACAATCGGTGTTTCTCATGAGACG
TCGCACTAAGCGCCTTTGCTGGAGAGACCACACCAACAATGCCACGCGTA
ACATTAGACCAGGTAAGTAGTATAAAAGAAAATTGTCGCCCGCTCTACTC
CGCCCAAACGTTGCCCCGTCTCGTCGAAAGGACATAAAGCAAGAGCTCGA
GTCGATTTGCGACGCCACGGTGGATCATGGAAACACCAAGACTGACACCT
GGGACGTACCTACGCACCCAGTCCAAGACGATGATCACGTTCCGATTTCC
TTCAAGACCTATTTGGAAGATCTAAGGGGCCGTTTCTTGGCGCTGCGAGC
ACCGTCGTCAGCGACCCCAGGCGGCATGGACGGTGGCTTCGGTTGCGAGA
CGCGTCGGTTGGAAACGGCGTCGTTTTGCGCCGCCCGGGTCCTAGTTGAT
GACAGCGCCAGCGTATCCTCTGCCTCTACCGGCATGTGCAGTCGCAGCGC
CGCGGGGGATAGCAGACCCAAAATGCCAGCAACTTCGTCTGTACCGGTCT
AGCTCTTCTAGCGCTATAAATAGCTGCTGGCTGTCACTCGCCCGTGTCTA
GGCTCTTCGATCGTCGAGCAAGGATTTGAATGGCTGCTGCAGACAATGGC
CGAACGCCTTGGTGCTATCAAGGCTGGAACCCAACCGTAGGCGTGCTCAT
GAGTTATTAGTAGTGGCCGCGGAGCTCGCCAATGTTGTTTGATAACGTTG
TGTTTCTTTTCCTCGGAGAGTTGTAACACGTCACCTGCTTGAGGTAGACA
TGGCTGGCGCTGTTTGTAGAGGGATCACCGCGTTCGGTTTCCTAAAAATA
AATTTTGGACTTGCGACGTCAGCTGCCGATATTAGCAGCTCTTTCTCGAG
AATATTTCGAAATGGAGCGGGGACGGCAAAGGACGCTGAGCAGCACATGC
TTTGAGTATTACATCAAATTTCGGGGTTGTTGTTATATCGTAAACTGATC
AGATTTGCAGGTATATAACATAACGAATTTGTAGCACAGACAGTACTACT
GGTAGGTTTAGACTCTTACTCGAATTACCGCCATATTATGGTCATTATGG
TCATTATGGTCATTTCCAACGCAGTTAGCTTCGCAAGCTTTCCCCTCCTC
TCCATCCCCCAGGACTACATCTACATTACGGTTCACCTGCGATACGTGAA
TGCTCATAAATGTTCTCGTAACTGTCACTCAAGGCTAGCCTCCAAGCCCA
AAGGCCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1083:246344..254800+

>mRNA_F-serratus_M_contig1083.781.1 ID=mRNA_F-serratus_M_contig1083.781.1|Name=mRNA_F-serratus_M_contig1083.781.1|organism=Fucus serratus male|type=CDS|length=3810bp|location=Sequence derived from alignment at F-serratus_M_contig1083:246344..254800+ (Fucus serratus male)
ATGGATGCCGTTCTTGCCCAAGTGCATGCGATCCATGACGACGGCGTGAA
CACAACAACAACAACAACAGGAAACGCGGAGATTGAACAAAATTTCACCG
ATTGGCTTCGTGATAACGGCGCCGAGTTCGGCGGCGTCGACTGGCCCTCG
CGCGACACGGCTGGTAGAGTGCGCGGTGCTGTAGCCCGCCGAGATATCGC
GACCTGGATGGATGCCGTTCTTGCCCAAGTGCATGCGATCCATGACGACG
GCGTGAACACAACAACAACAACAACAGGAAACGCGGAGATTGAACAAAAT
TTCACCGATTGGCTTCGTGATAACGGCGCCGAGTTCGGCGGCGTCGACTG
GCCCTCGCGCGACACGGCTGGTAGAGTGCGCGGTGCTGTAGCCCGCCGAG
ATATCGCGACCTGGGAACATATGGTGGTCATCCCGCACCACCTCATGCTT
TCCGTGTTCCATGCAAGGGCCGACCCCGACACAGGCCACGTCTACAGGGA
GAAAGCCCCCTTACTCAAGAGTGATAACGGCCTCGCCATATACATCATGC
AGGAGATGCTCAAGGGCGAGAGCTCCTTCTACTGGCCATACTTGAGAATT
CTGCCAGTGCCCTCTAATCTACGGCATTGGAGCGAGCCTGATCTGCTCGA
GCTTCAGGAGCCGAGAGTAGCCCGCTGGGCTGCTACCAGGACGCGCCAGC
TCCGCATGCTGTACCGCGATACAATGGAGGTGTTATCGAATTCCTACCCA
GGGCTGTTTCCGGAACATATGGTGGTCATCCCGCACCACCTCATGCTTTC
CGTGTTCCATGCAAGGGCCGACCCCGACACAGGCCACGTCTACAGGGAGA
AAGCCCCCTTACTCAAGAGTGATAACGGCCTCGCCATATACATCATGCAG
GAGATGCTCAAGGGCGAGAGCTCCTTCTACTGGCCATACTTGAGAATTCT
GCCAGTGCCCTCTAATCTACGGCATTGGAGCGAGCCTGATCTGCTCGAGC
TTCAGGAGCCGAGAGTAGCCCGCTGGGCTGCTACCAGGACGCGCCAGCTC
CGCATGCTGTACCGCGATACAATGGAGGTGTTATCGAATTCCTACCCAGG
GCTGTTTCCGACTCACCGGTACACATTCGAGCTCTTTGATTTCGCGTGGA
GCACACTGCAAGCGAGGGCATTCGGGAGGCGACTAAAATGCTCAGCGCTG
GTGCCGTTCGCTGACTGCCTTAACCACGGAAACGTCCAGACGAAACTCAC
CGGTACACATTCGAGCTCTTTGATTTCGCGTGGAGCACACTGCAAGCGAG
GGCATTCGGGAGGCGACTAAAATGCTCAGCGCTGGTGCCGTTCGCTGACT
GCCTTAACCACGGAAACGTCCAGACGAAGTACGACTTTGACGTCGAAGGC
AACGGCGTCTTCCGGCTTTTCCCCACGGGGACGAATTGTTACCCACAGGG
TACCGAGGTTCTCAATAGCTACGGACGACGAGCGAACGACATCCTTCTCC
TCGATTACGGCTTCACGATGCTCGACAACCCTTGGGACGCGGCTGAGGTC
ACCTGCTCCCTTCTACCCGGGGATACGCTATTCGAACGGAGGAAAGCGCG
TTTGCGCGCCAGTGGGCAGCACACTTTCCGGTACGACTTTGACGTCGAAG
GCAACGGCGTCTTCCGGCTTTTCCCCACGGGGACGAATTGTTACCCACAG
GGTACCGAGGTTCTCAATAGCTACGGACGACGAGCGAACGACATCCTTCT
CCTCGATTACGGCTTCACGATGCTCGACAACCCTTGGGACGCGGCTGAGG
TCACCTGCTCCCTTCTACCCGGGGATACGCTATTCGAACGGAGGAAAGCG
CGTTTGCGCGCCAGTGGGCAGCACACTTTCCGAAAAGTACGCATCCGCCG
GGGGCAGTGGTCCTCGGACCTTCTGCAATTTAATCGCTGCGCGTGCCTGG
CGGTTTCTGAGCTGAACCAGCTGGAAGCTCAAGAAGATGCACGAAGCGCC
GACCATCCGAGCCAGGCTCATCCGGGCGCCGACGTTGCCCAAGCCAGGAA
GGTCATAGGCAGTGCCCGGCAGACGGTGACATACGCAGCGAGCGAATCGT
TTTGTTCACGCCCAGGGGCGGACTTCGGCGACGAACGTACTGCTAAGGGA
ATGCGTCTTCCTCTCGATGAAGAAGACGCTTGTGGTTCTCAACTAGGATC
GGACGAGCCATGCTATTCCAACGCCTCGAGAGGATTTCCGGGCGGGGCTC
TGTCGGTCGAGAACGAGCTGGCGGCGTTGACAGAAATCGTGGTGCAACTG
CTGGAGGCCAGGGATATCTTCCCCACCAAACTTGAGAGCGACGAGAAAAG
TACGCATCCGCCGGGGGCAGTGGTCCTCGGACCTTCTGCAATTTAATCGC
TGCGCGTGCCTGGCGGTTTCTGAGCTGAACCAGCTGGAAGCTCAAGAAGA
TGCACGAAGCGCCGACCATCCGAGCCAGGCTCATCCGGGCGCCGACGTTG
CCCAAGCCAGGAAGGTCATAGGCAGTGCCCGGCAGACGGTGACATACGCA
GCGAGCGAATCGTTTTGTTCACGCCCAGGGGCGGACTTCGGCGACGAACG
TACTGCTAAGGGAATGCGTCTTCCTCTCGATGAAGAAGACGCTTGTGGTT
CTCAACTAGGATCGGACGAGCCATGCTATTCCAACGCCTCGAGAGGATTT
CCGGGCGGGGCTCTGTCGGTCGAGAACGAGCTGGCGGCGTTGACAGAAAT
CGTGGTGCAACTGCTGGAGGCCAGGGATATCTTCCCCACCAAACTTGAGA
GCGACGAGAGATTGATCCGAGAGGTCAATGGCGACGCGTTCCCCGAGCTG
CTGAACGCCTTGAAGTACCGCGTCACAATAAAGCGCATTTTGGCCGAGCA
TTTAGGTCTGGCCGAACGAGCCATCGCTTTTGTGCAGAGATTGATCCGAG
AGGTCAATGGCGACGCGTTCCCCGAGCTGCTGAACGCCTTGAAGTACCGC
GTCACAATAAAGCGCATTTTGGCCGAGCATTTAGGTCTGGCCGAACGAGC
CATCGCTTTTGTGCAGGACATAAAGCAAGAGCTCGAGTCGATTTGCGACG
CCACGGTGGATCATGGAAACACCAAGACTGACACCTGGGACGTACCTACG
CACCCAGTCCAAGACGATGATCACGTTCCGATTTCCTTCAAGACCTATTT
GGAAGATCTAAGGGGCCGTTTCTTGGCGCTGCGAGCACCGTCGTCAGCGA
CCCCAGGCGGCATGGACGGTGGCTTCGGTTGCGAGACGCGTCGGTTGGAA
ACGGCGTCGTTTTGCGCCGCCCGGGTCCTAGTTGATGACAGCGCCAGCGT
ATCCTCTGCCTCTACCGGCATGTGCAGTCGCAGCGCCGCGGGGGATAGCA
GACCCAAAATGCCAGCAACTTCGTCTGTACCGGTCTAGGACATAAAGCAA
GAGCTCGAGTCGATTTGCGACGCCACGGTGGATCATGGAAACACCAAGAC
TGACACCTGGGACGTACCTACGCACCCAGTCCAAGACGATGATCACGTTC
CGATTTCCTTCAAGACCTATTTGGAAGATCTAAGGGGCCGTTTCTTGGCG
CTGCGAGCACCGTCGTCAGCGACCCCAGGCGGCATGGACGGTGGCTTCGG
TTGCGAGACGCGTCGGTTGGAAACGGCGTCGTTTTGCGCCGCCCGGGTCC
TAGTTGATGACAGCGCCAGCGTATCCTCTGCCTCTACCGGCATGTGCAGT
CGCAGCGCCGCGGGGGATAGCAGACCCAAAATGCCAGCAACTTCGTCTGT
ACCGGTCTAG
back to top