mRNA_F-serratus_M_contig1083.780.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Match: D7G8K2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K2_ECTSI) HSP 1 Score: 135 bits (340), Expect = 4.420e-31 Identity = 118/300 (39.33%), Postives = 154/300 (51.33%), Query Frame = 3
Query: 681 SAGGASGAGGNQDETLPPSVARAWRTFDVTKQIEFEKKERQKAHQARQEKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKNLAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKWLGSIKEEGARKREIRAQEQRELSELDSRLVKDHLRKIEEDERKRAEMTRHRMKRHEDIGDFWERHGAGRENKDLKKREEQRILEAARRIEEAQLERERKEAEKRRLAMIAMATDNKKVIAEKNATREKAQREDMELARR 1580
SAGG G D LPPS+ARAWRTFDV KQIE+E KE+QK+ +A+Q+K XXXXXXXXXX E+ LA+F XX K L +I+ E A++REIR Q QRE D+ L+K+H ++++ +E+ RA + RMKR+EDIG+FW AG +++ RE Q+ L+AARR EEA LERERKE E RR+A + MA +N+KVI EKNA K +EDME A+R
Sbjct: 42 SAGGVDDVG---DGLLPPSIARAWRTFDVAKQIEYETKEQQKSEKAKQQKIIFREELEVHRAKQAEKKAVEXXXXXXXXXXXERKLAEFHMEQEAIKKRASDKHAEEKALXXQQVKRLQAEKEIERQARLDEEMLDIERCKAKLQGEVDEADRKRKSEKDRLAAIQAENAKQREIREQRQRESDAADALLLKEHRQRMDAEEQARAAKLKQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQR 338
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Match: A0A835ZGD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD1_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.900e-16 Identity = 76/220 (34.55%), Postives = 124/220 (56.36%), Query Frame = 3
Query: 1164 LGSIKEEGARKREIRAQEQRELSELDSRLVKDHLRKIEEDERKRAEMTRHRMKRHEDIGDFWERHGAGRENKDLKKREEQRILEAARRIEEAQLERERKEAEKRRLAMIAMATDNKKVIAEKN---ATREKAQREDMELARRFISDSEAFVREERDKMATKKATTVRYRKDLEKQVAETKARRMQLEMNDTEFKLNSDIVKKLESDKELVAQVKQRMDSA 1814
L IK+E A R I Q +E +E D RL++++ +++++E RAE R IG FW GAG++ + ++R E I+ A E A + RE + EK+R I A N+ + E+ A ++ +R +E AR+ SEA + E K K++ +RY +LE+Q+AET+ R Q++M++TE LN+D++ +LE+D L +VK RM +A
Sbjct: 201 LERIKQENAAHRIILEQRAKEAAEQDMRLMQEYKERLDKEEADRAEKLRR-------IGAFWTEKGAGKKEAEEQRRAEALIVAEANAKERADIARELHDREKKRTGCINTALQNRLAMEERRRRQADEQEKERVYLETARKL---SEADKQAEAAKRQRKRSAMLRYTAELERQMAETRRMRQQVDMSETEALLNADMIARLEADVALQGKVKARMGAA 410
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Match: A0A7S1TWB0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWB0_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.940e-14 Identity = 60/208 (28.85%), Postives = 119/208 (57.21%), Query Frame = 3
Query: 1182 EGARKREIRAQEQRELSELDSRLVKDHLRKIEEDERKRAEMTRHRMKRHEDIGDFWERHGAGRENKDLKKREEQRILEAARRIEEAQLERERKEAEKRRLAMIAMATDNKKVIAEKNATREKAQREDMELARRFISDSEAFVREERDKMATKKATTVRYRKDLEKQVAETKARRMQLEMNDTEFKLNSDIVKKLESDKELVAQVKQRM 1805
E A++ E+ +E E D RL++++ K+E ++ +R RM+R+E G W GAG++ ++ + R E+ IL A++ E+A +ERER++ E R +++A NK ++ EK ++ M A F + E +V ER + A ++ ++ L++Q+ + RR +EM+D E +N ++++K++ D E+V++++ R+
Sbjct: 33 ENAKRAEVAKEEAAE----DVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKKKEDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 236
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Match: A0A7S1TW05_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW05_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.050e-12 Identity = 60/208 (28.85%), Postives = 119/208 (57.21%), Query Frame = 3
Query: 1182 EGARKREIRAQEQRELSELDSRLVKDHLRKIEEDERKRAEMTRHRMKRHEDIGDFWERHGAGRENKDLKKREEQRILEAARRIEEAQLERERKEAEKRRLAMIAMATDNKKVIAEKNATREKAQREDMELARRFISDSEAFVREERDKMATKKATTVRYRKDLEKQVAETKARRMQLEMNDTEFKLNSDIVKKLESDKELVAQVKQRM 1805
E A++ E+ +E E D RL++++ K+E ++ +R RM+R+E G W GAG++ ++ + R E+ IL A++ E+A +ERER++ E R +++A NK ++ EK ++ M A F + E +V ER + A ++ ++ L++Q+ + RR +EM+D E +N ++++K++ D E+V++++ R+
Sbjct: 388 ENAKRAEVAKEEAAE----DVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKKKEDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 591
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Match: A0A7S2WFB5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFB5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.320e-11 Identity = 66/220 (30.00%), Postives = 119/220 (54.09%), Query Frame = 3
Query: 1164 LGSIKEEGARKREIRAQEQRELSELDSRLVKDHLRKIEEDERKRAEMTRHRMKRHEDIGDFWERHGAGRENKDLKKREEQRILEAARRIEEAQLERERKEAEKRRLAMIAMATDNKKVIAEKNATREKAQREDMELARRFISDSEAFVREERDKMATKKATTVRYRKDLEKQV---AETKARRMQLEMNDTEFKLNSDIVKKLESDKELVAQVKQRMDSA 1814
+ +K + ++R+IR Q +++ + D RL++ + K+E +E +RA RM+R + G W GAG+E + +++ EQ+IL A R E+A LERER++ + + MA N+K+I K ++ Q+ED A + D + F E K K +++ L +Q+ + M+ M+D E K+N +++KKL + EL+ +V R+ +A
Sbjct: 286 MRQVKLDNLKERQIRMQRKQQEALEDQRLMEAYKAKLEREEVERANAFERRMERLQASGQKWAEEGAGKEQLEFEQKLEQQILGEALRKEQADLERERRDKQAIKDKQRLMAESNRKLIEAKKLRMQRKQQEDQSFAEKSQRDQKEFFESEARKKKEKALLMNQHQIALSQQIHHRSNNPTDPMKASMSDHERKINGELLKKLHQEPELLLKVANRVHAA 505
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Match: D8LLG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG7_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 4.690e-11 Identity = 59/196 (30.10%), Postives = 113/196 (57.65%), Query Frame = 3
Query: 1230 SELDSRLVKDHLRKIEEDERKRAEMTRHRMKRHEDIGDFWERHGAGRENKDLKKREEQRILEAARRIEEAQLERERKEAEKRRLAMIAMATDNKKVIAEKNATREKAQREDMELARRFISDSEAFVRE----ERDKMATKKATTVRYRKDLEKQVAETKARRMQLEMNDTEFKLNSDIVKKLESDKELVAQVKQRM 1805
+E D RL+K++ +++ ++ +R R++R+E IG+ W GAG+ D EE+RIL A E+ +RE ++ E R+ + DNK+++ +K A ++ ++ + E A++F E V + +R+ + KKA Y + LE Q+ ET+A ++M DTE K+N ++++KL+ D++L ++ +R+
Sbjct: 184 AEEDKRLMKEYRERLDREQAERTAAHNKRLQRYEMIGNQWAESGAGKRQHDKDIAEERRILAEAAIKEKIDEDREIRDKEALRVDRLRCLEDNKRLMGDKAARKKADEKLEAEYAQQFRVQGEMHVAKGLERKREMVREKKA----YARMLEDQIRETRAALRTVQMTDTERKMNGELLRKLQGDRDLQERISRRL 375 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1083.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1083.780.1 >prot_F-serratus_M_contig1083.780.1 ID=prot_F-serratus_M_contig1083.780.1|Name=mRNA_F-serratus_M_contig1083.780.1|organism=Fucus serratus male|type=polypeptide|length=542bp MSRLQMMLQQKLIQKYGNKRNPTSRFNAEINDAVQEFIAQTTSSAKVSDEback to top mRNA from alignment at F-serratus_M_contig1083:173425..201060- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1083.780.1 ID=mRNA_F-serratus_M_contig1083.780.1|Name=mRNA_F-serratus_M_contig1083.780.1|organism=Fucus serratus male|type=mRNA|length=27636bp|location=Sequence derived from alignment at F-serratus_M_contig1083:173425..201060- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1083:173425..201060- >mRNA_F-serratus_M_contig1083.780.1 ID=mRNA_F-serratus_M_contig1083.780.1|Name=mRNA_F-serratus_M_contig1083.780.1|organism=Fucus serratus male|type=CDS|length=3252bp|location=Sequence derived from alignment at F-serratus_M_contig1083:173425..201060- (Fucus serratus male)back to top |