mRNA_F-serratus_M_contig108.766.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: D8LMG2_ECTSI (Casein kinase II subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMG2_ECTSI) HSP 1 Score: 149 bits (377), Expect = 8.160e-37 Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 3 Query: 195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNEDHQDQDQAP*PPLAGANGEAGSARGNEKQ 590 K+ VGAFG CPR+ CQGQNVLP GL++VPR T AV+CPKCQDI++P IDGAY GTTF+H+FLL P++ P S+AY RIYGFKIH +S HRN +NGE GS RG+ ++ Sbjct: 208 KFQVGAFGRCPRVYCQGQNVLPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKDP------------SNGEGGSGRGSRRK 327
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A836CD25_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD25_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.080e-36 Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNEDHQDQDQAP*PPLAGANGEAGSARGNEKQKKGTQRT 611 KY GAFG CPRI CQGQNVLPVGL++VPR T AV+CP+CQDI++P +DGAY GTTF H+FLL PDV P S++Y+PR+YGF+I+ +S +RN + A + ++GSAR +++ G + T Sbjct: 208 KYQTGAFGRCPRIYCQGQNVLPVGLSDVPRSCTVAVYCPRCQDIFHPKSTRQANVDGAYFGTTFPHLFLLTHPDVIPARPSQSYVPRVYGFRINAASAYYRNNRRE---------RASEDSQSGSARTRRERRDGNRGT 337
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A6U2PBT7_9STRA (Casein kinase II subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBT7_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.160e-30 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNED 506 KY + +FG CPR+ CQGQ VLPVG++++PR T VFCP+C +++ P +DGAY GTTF H++L+ P++ P S++Y PR+YGFKIH SS +R +D Sbjct: 43 KYRIASFGRCPRVFCQGQPVLPVGMSDLPRNYTVNVFCPRCHELFFPKSTRQANVDGAYFGTTFPHLYLMTHPEIIPARPSQSYAPRVYGFKIHSSSLYYRAKD 146
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A4P9YRM8_9FUNG (Casein kinase II subunit beta n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YRM8_9FUNG) HSP 1 Score: 128 bits (322), Expect = 2.960e-30 Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 180 GMTKM--KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNEDHQDQDQ 524 G+ KM KY FG CPR+ C GQ V+PVGL+++ A ++CP+CQDIY P + IDGAY GTTFAHM + +P++ P S E Y+P+I+GFKIH S HR +D +DQ Sbjct: 101 GLNKMLEKYKKAEFGRCPRVLCNGQPVVPVGLSDLAYNKAAKIYCPRCQDIYTPKSSRHATIDGAYFGTTFAHMLFMVYPNLVPQRSHERYVPKIFGFKIHEISKQHRKQDELREDQ 217
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A7S1CU52_9STRA (Casein kinase II subunit beta n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CU52_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.150e-29 Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 3 Query: 195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNED 506 KY +FG CP + CQGQ VLPVGL+++PR T VFCP+C ++ P IDGAY GTTF H++L+ PD+ P S+ Y+PR+YGFKIH SS RN + Sbjct: 56 KYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMNHPDMIPVRPSQQYVPRVYGFKIHQSSLYFRNHE 159
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A2V3J007_9FLOR (Casein kinase II subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J007_9FLOR) HSP 1 Score: 127 bits (318), Expect = 1.980e-29 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 126 VWARSRDAVRSHPRTVHPGMTKMKYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSS-GVHRNEDHQD 515 + AR DA+RS KY GAFG CPR+ CQGQ VLPVGL+++PR T FCP C D+Y P +DGA+ GTTF HMFL + + PP + E Y+PRIYGFKIH ++ V RN + +D Sbjct: 106 LTARGMDAMRS------------KYAEGAFGRCPRVYCQGQQVLPVGLSDMPRHSTVKTFCPMCWDVYYPRSRIHNNLDGAFWGTTFPHMFLHTYNSLVPPRNPERYVPRIYGFKIHKTAIQVRRNVNAED 224
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A8H7Q5C7_MORIS (Casein kinase II subunit beta n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7Q5C7_MORIS) HSP 1 Score: 125 bits (315), Expect = 2.830e-29 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 3 Query: 180 GMTKM--KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNED 506 G+ KM KY FG CPR+ C Q +LPVGL++VP T ++CPKC+DIY+P + IDGAY GT+F HM +P++ P S+E YIPRI+GFK+H + VHR +D Sbjct: 107 GLAKMLDKYKKAEFGRCPRVLCHNQPLLPVGLSDVPHSKTVKLYCPKCEDIYSPKSSRHAAIDGAYYGTSFPHMLFQVYPNLMPQKSTERYIPRIFGFKVHEIAKVHRWQD 217
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A087SKW6_AUXPR (Casein kinase II subunit beta n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SKW6_AUXPR) HSP 1 Score: 126 bits (317), Expect = 2.860e-29 Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSS 485 K+ G FG CPR+ C GQ LPVG++++PR+ T +FCP+C++ Y P G +DGAY GTT AH+ LL +P +RP S+EA++PRI+GFKIHPS+ Sbjct: 133 KFRAGEFGRCPRVLCHGQPCLPVGVSDLPRQATVKLFCPRCEEAYYPRSRLHGNLDGAYFGTTMAHLLLLTYPALRPTKSTEAFVPRIFGFKIHPSA 229
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A1R1PTJ3_ZANCU (Casein kinase II subunit beta n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PTJ3_ZANCU) HSP 1 Score: 125 bits (314), Expect = 3.000e-29 Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 3 Query: 180 GMTKM--KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEA--YIPRIYGFKIHPSSGVHRNEDHQDQDQA 527 G+ KM KY G FG CPR+ C QN+LPVG+ +VP E + ++C +C+DIY+P + IDGAY GT+F HM L +P ++PP +EA Y+P+I+GFKIH + VHR +D Q + QA Sbjct: 94 GLIKMVEKYKRGDFGRCPRVYCNQQNLLPVGITDVPNEVSVKLYCCRCEDIYHPKSSRHCSIDGAYFGTSFPHMLLQAYPSLKPPPLTEAQRYVPKIFGFKIHNIANVHRWQDAQRKAQA 213
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A7S2Y033_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y033_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.990e-29 Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 180 GMTKM--KYNVGA-FGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSG---VHRNEDHQDQDQAP 530 GM M KY A FG CPRI C+GQ LPVGL++VPR T AV+CP+C DI++P + IDGAY GTTF H+ LL PD+ PP S+ Y+PRIYG++I+ S V R +D+D AP Sbjct: 161 GMQAMHDKYQAAACFGRCPRIFCEGQPTLPVGLSDVPRTCTVAVYCPRCCDIFHPKSSRQANIDGAYFGTTFPHLLLLTHPDLLPPPPSQRYVPRIYGYRINKDSAYYAVPRALQEEDEDPAP 283 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig108.766.1 >prot_F-serratus_M_contig108.766.1 ID=prot_F-serratus_M_contig108.766.1|Name=mRNA_F-serratus_M_contig108.766.1|organism=Fucus serratus male|type=polypeptide|length=117bp MTKMKYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNback to top mRNA from alignment at F-serratus_M_contig108:643466..646609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig108.766.1 ID=mRNA_F-serratus_M_contig108.766.1|Name=mRNA_F-serratus_M_contig108.766.1|organism=Fucus serratus male|type=mRNA|length=3144bp|location=Sequence derived from alignment at F-serratus_M_contig108:643466..646609+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig108:643466..646609+ >mRNA_F-serratus_M_contig108.766.1 ID=mRNA_F-serratus_M_contig108.766.1|Name=mRNA_F-serratus_M_contig108.766.1|organism=Fucus serratus male|type=CDS|length=702bp|location=Sequence derived from alignment at F-serratus_M_contig108:643466..646609+ (Fucus serratus male)back to top |