mRNA_F-serratus_M_contig108.766.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig108.766.1
Unique NamemRNA_F-serratus_M_contig108.766.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: D8LMG2_ECTSI (Casein kinase II subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMG2_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 8.160e-37
Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNEDHQDQDQAP*PPLAGANGEAGSARGNEKQ 590
            K+ VGAFG CPR+ CQGQNVLP GL++VPR  T AV+CPKCQDI++P       IDGAY GTTF+H+FLL  P++ P   S+AY  RIYGFKIH +S  HRN                +NGE GS RG+ ++
Sbjct:  208 KFQVGAFGRCPRVYCQGQNVLPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKDP------------SNGEGGSGRGSRRK 327          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A836CD25_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD25_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.080e-36
Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 3
Query:  195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNEDHQDQDQAP*PPLAGANGEAGSARGNEKQKKGTQRT 611
            KY  GAFG CPRI CQGQNVLPVGL++VPR  T AV+CP+CQDI++P       +DGAY GTTF H+FLL  PDV P   S++Y+PR+YGF+I+ +S  +RN   +          A  + ++GSAR   +++ G + T
Sbjct:  208 KYQTGAFGRCPRIYCQGQNVLPVGLSDVPRSCTVAVYCPRCQDIFHPKSTRQANVDGAYFGTTFPHLFLLTHPDVIPARPSQSYVPRVYGFRINAASAYYRNNRRE---------RASEDSQSGSARTRRERRDGNRGT 337          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A6U2PBT7_9STRA (Casein kinase II subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBT7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.160e-30
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 3
Query:  195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNED 506
            KY + +FG CPR+ CQGQ VLPVG++++PR  T  VFCP+C +++ P       +DGAY GTTF H++L+  P++ P   S++Y PR+YGFKIH SS  +R +D
Sbjct:   43 KYRIASFGRCPRVFCQGQPVLPVGMSDLPRNYTVNVFCPRCHELFFPKSTRQANVDGAYFGTTFPHLYLMTHPEIIPARPSQSYAPRVYGFKIHSSSLYYRAKD 146          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A4P9YRM8_9FUNG (Casein kinase II subunit beta n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YRM8_9FUNG)

HSP 1 Score: 128 bits (322), Expect = 2.960e-30
Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 3
Query:  180 GMTKM--KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNEDHQDQDQ 524
            G+ KM  KY    FG CPR+ C GQ V+PVGL+++     A ++CP+CQDIY P  +    IDGAY GTTFAHM  + +P++ P  S E Y+P+I+GFKIH  S  HR +D   +DQ
Sbjct:  101 GLNKMLEKYKKAEFGRCPRVLCNGQPVVPVGLSDLAYNKAAKIYCPRCQDIYTPKSSRHATIDGAYFGTTFAHMLFMVYPNLVPQRSHERYVPKIFGFKIHEISKQHRKQDELREDQ 217          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A7S1CU52_9STRA (Casein kinase II subunit beta n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CU52_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.150e-29
Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 3
Query:  195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNED 506
            KY   +FG CP + CQGQ VLPVGL+++PR  T  VFCP+C  ++ P       IDGAY GTTF H++L+  PD+ P   S+ Y+PR+YGFKIH SS   RN +
Sbjct:   56 KYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMNHPDMIPVRPSQQYVPRVYGFKIHQSSLYFRNHE 159          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A2V3J007_9FLOR (Casein kinase II subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J007_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 1.980e-29
Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 3
Query:  126 VWARSRDAVRSHPRTVHPGMTKMKYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSS-GVHRNEDHQD 515
            + AR  DA+RS            KY  GAFG CPR+ CQGQ VLPVGL+++PR  T   FCP C D+Y P       +DGA+ GTTF HMFL  +  + PP + E Y+PRIYGFKIH ++  V RN + +D
Sbjct:  106 LTARGMDAMRS------------KYAEGAFGRCPRVYCQGQQVLPVGLSDMPRHSTVKTFCPMCWDVYYPRSRIHNNLDGAFWGTTFPHMFLHTYNSLVPPRNPERYVPRIYGFKIHKTAIQVRRNVNAED 224          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A8H7Q5C7_MORIS (Casein kinase II subunit beta n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7Q5C7_MORIS)

HSP 1 Score: 125 bits (315), Expect = 2.830e-29
Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 3
Query:  180 GMTKM--KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSGVHRNED 506
            G+ KM  KY    FG CPR+ C  Q +LPVGL++VP   T  ++CPKC+DIY+P  +    IDGAY GT+F HM    +P++ P  S+E YIPRI+GFK+H  + VHR +D
Sbjct:  107 GLAKMLDKYKKAEFGRCPRVLCHNQPLLPVGLSDVPHSKTVKLYCPKCEDIYSPKSSRHAAIDGAYYGTSFPHMLFQVYPNLMPQKSTERYIPRIFGFKVHEIAKVHRWQD 217          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A087SKW6_AUXPR (Casein kinase II subunit beta n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SKW6_AUXPR)

HSP 1 Score: 126 bits (317), Expect = 2.860e-29
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 3
Query:  195 KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSS 485
            K+  G FG CPR+ C GQ  LPVG++++PR+ T  +FCP+C++ Y P     G +DGAY GTT AH+ LL +P +RP  S+EA++PRI+GFKIHPS+
Sbjct:  133 KFRAGEFGRCPRVLCHGQPCLPVGVSDLPRQATVKLFCPRCEEAYYPRSRLHGNLDGAYFGTTMAHLLLLTYPALRPTKSTEAFVPRIFGFKIHPSA 229          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A1R1PTJ3_ZANCU (Casein kinase II subunit beta n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PTJ3_ZANCU)

HSP 1 Score: 125 bits (314), Expect = 3.000e-29
Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  180 GMTKM--KYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEA--YIPRIYGFKIHPSSGVHRNEDHQDQDQA 527
            G+ KM  KY  G FG CPR+ C  QN+LPVG+ +VP E +  ++C +C+DIY+P  +    IDGAY GT+F HM L  +P ++PP  +EA  Y+P+I+GFKIH  + VHR +D Q + QA
Sbjct:   94 GLIKMVEKYKRGDFGRCPRVYCNQQNLLPVGITDVPNEVSVKLYCCRCEDIYHPKSSRHCSIDGAYFGTSFPHMLLQAYPSLKPPPLTEAQRYVPKIFGFKIHNIANVHRWQDAQRKAQA 213          
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Match: A0A7S2Y033_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y033_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.990e-29
Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 3
Query:  180 GMTKM--KYNVGA-FGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYNPDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPSSG---VHRNEDHQDQDQAP 530
            GM  M  KY   A FG CPRI C+GQ  LPVGL++VPR  T AV+CP+C DI++P  +    IDGAY GTTF H+ LL  PD+ PP  S+ Y+PRIYG++I+  S    V R    +D+D AP
Sbjct:  161 GMQAMHDKYQAAACFGRCPRIFCEGQPTLPVGLSDVPRTCTVAVYCPRCCDIFHPKSSRQANIDGAYFGTTFPHLLLLTHPDLLPPPPSQRYVPRIYGYRINKDSAYYAVPRALQEEDEDPAP 283          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig108.766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG2_ECTSI8.160e-3753.03Casein kinase II subunit beta n=2 Tax=Ectocarpus T... [more]
A0A836CD25_9STRA4.080e-3648.92Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A6U2PBT7_9STRA1.160e-3049.04Casein kinase II subunit beta n=1 Tax=Leptocylindr... [more]
A0A4P9YRM8_9FUNG2.960e-3048.72Casein kinase II subunit beta n=1 Tax=Syncephalis ... [more]
A0A7S1CU52_9STRA1.150e-2950.96Casein kinase II subunit beta n=1 Tax=Skeletonema ... [more]
A0A2V3J007_9FLOR1.980e-2948.09Casein kinase II subunit beta n=1 Tax=Gracilariops... [more]
A0A8H7Q5C7_MORIS2.830e-2949.55Casein kinase II subunit beta n=2 Tax=Umbelopsis T... [more]
A0A087SKW6_AUXPR2.860e-2952.58Casein kinase II subunit beta n=2 Tax=Auxenochlore... [more]
A0A1R1PTJ3_ZANCU3.000e-2948.33Casein kinase II subunit beta n=1 Tax=Zancudomyces... [more]
A0A7S2Y033_9STRA3.990e-2951.22Casein kinase II subunit beta (Fragment) n=1 Tax=F... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig108contigF-serratus_M_contig108:643466..646609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.4
Seed ortholog evalue3.3e-32
Seed eggNOG ortholog2880.D8LMG2
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001932,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005956,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007623,GO:0008134,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010228,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019207,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0022414,GO:0030234,GO:0031323,GO:0031399,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0042325,GO:0042752,GO:0042753,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043549,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045859,GO:0048511,GO:0048518,GO:0048573,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051174,GO:0051246,GO:0051338,GO:0060255,GO:0061458,GO:0065007,GO:0065009,GO:0071704,GO:0071900,GO:0080090,GO:0098772,GO:0140096,GO:1901564
EggNOG free text desc.protein kinase regulator activity
EggNOG OGsCOG5041@1,KOG3092@2759
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons5
Model size1725
Cds size351
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928931.1842551-UTR-F-serratus_M_contig108:643465..6435851622928931.1842551-UTR-F-serratus_M_contig108:643465..643585Fucus serratus maleUTRF-serratus_M_contig108 643466..643585 +
1690962634.4832935-UTR-F-serratus_M_contig108:643465..6435851690962634.4832935-UTR-F-serratus_M_contig108:643465..643585Fucus serratus maleUTRF-serratus_M_contig108 643466..643585 +
1622928931.1977265-UTR-F-serratus_M_contig108:643980..6440421622928931.1977265-UTR-F-serratus_M_contig108:643980..644042Fucus serratus maleUTRF-serratus_M_contig108 643981..644042 +
1690962634.4949307-UTR-F-serratus_M_contig108:643980..6440421690962634.4949307-UTR-F-serratus_M_contig108:643980..644042Fucus serratus maleUTRF-serratus_M_contig108 643981..644042 +
1622928931.2700403-UTR-F-serratus_M_contig108:645417..6466091622928931.2700403-UTR-F-serratus_M_contig108:645417..646609Fucus serratus maleUTRF-serratus_M_contig108 645418..646609 +
1690962634.5498276-UTR-F-serratus_M_contig108:645417..6466091690962634.5498276-UTR-F-serratus_M_contig108:645417..646609Fucus serratus maleUTRF-serratus_M_contig108 645418..646609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928931.2151737-CDS-F-serratus_M_contig108:644042..6440541622928931.2151737-CDS-F-serratus_M_contig108:644042..644054Fucus serratus maleCDSF-serratus_M_contig108 644043..644054 +
1690962634.5021539-CDS-F-serratus_M_contig108:644042..6440541690962634.5021539-CDS-F-serratus_M_contig108:644042..644054Fucus serratus maleCDSF-serratus_M_contig108 644043..644054 +
1622928931.2279177-CDS-F-serratus_M_contig108:644327..6444531622928931.2279177-CDS-F-serratus_M_contig108:644327..644453Fucus serratus maleCDSF-serratus_M_contig108 644328..644453 +
1690962634.5098388-CDS-F-serratus_M_contig108:644327..6444531690962634.5098388-CDS-F-serratus_M_contig108:644327..644453Fucus serratus maleCDSF-serratus_M_contig108 644328..644453 +
1622928931.2399864-CDS-F-serratus_M_contig108:644826..6449461622928931.2399864-CDS-F-serratus_M_contig108:644826..644946Fucus serratus maleCDSF-serratus_M_contig108 644827..644946 +
1690962634.5301645-CDS-F-serratus_M_contig108:644826..6449461690962634.5301645-CDS-F-serratus_M_contig108:644826..644946Fucus serratus maleCDSF-serratus_M_contig108 644827..644946 +
1622928931.2535493-CDS-F-serratus_M_contig108:645324..6454171622928931.2535493-CDS-F-serratus_M_contig108:645324..645417Fucus serratus maleCDSF-serratus_M_contig108 645325..645417 +
1690962634.5404513-CDS-F-serratus_M_contig108:645324..6454171690962634.5404513-CDS-F-serratus_M_contig108:645324..645417Fucus serratus maleCDSF-serratus_M_contig108 645325..645417 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig108.766.1prot_F-serratus_M_contig108.766.1Fucus serratus malepolypeptideF-serratus_M_contig108 644043..645417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig108.766.1

>prot_F-serratus_M_contig108.766.1 ID=prot_F-serratus_M_contig108.766.1|Name=mRNA_F-serratus_M_contig108.766.1|organism=Fucus serratus male|type=polypeptide|length=117bp
MTKMKYNVGAFGVCPRINCQGQNVLPVGLANVPREGTAAVFCPKCQDIYN
PDDAELGGIDGAYLGTTFAHMFLLEFPDVRPPGSSEAYIPRIYGFKIHPS
SGVHRNEDHQDQDQAP*
back to top

mRNA from alignment at F-serratus_M_contig108:643466..646609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig108.766.1 ID=mRNA_F-serratus_M_contig108.766.1|Name=mRNA_F-serratus_M_contig108.766.1|organism=Fucus serratus male|type=mRNA|length=3144bp|location=Sequence derived from alignment at F-serratus_M_contig108:643466..646609+ (Fucus serratus male)
TTCATCCGAAGCGATATAAACCTGGCAGGACTGTCAGATATCCTCCCGAT GTATGAGGAAGCCCTGGCCACCATCCTCGACGAGATGCCAGCGGAAGAAG TACCGACAGAGGAACACGAGGTGCACTATTAATACTACCTGGTACTCTAG AGCAGCATTAAATACCTGATACTAATACTGGAGTACTTAATACTCTATAA AAGTATTAGACCTAATAACAGGTACCAGTACAGTGATAGGATGGAAACCG ACGAAAACTAACTGACGGTGGGAAAAGAGCGAAGATACTGTAGATGAGAT ACTACTGTTCCAATTGTTTGCGTTGTTGCGGAATAGTGCAGTGGTGCAGT CTTGAAGTCTTGAAGCGTCATACACCTACAGCACCACAGCATCCTATTAA TATTAATATTCATGGCTTGATAGCTTGATTGGTTTCCTCTGCTTCCTCTG CGCTCGCCGTGCTTCGCCTGCTCGCTCCATCGTCTGACTGCTGCGATCGA TGGCTGCGAATATAGTGGGTGTTTGGGCGCGCAGCCGAGATGCTGTACGG TCTCATCCACGCACGGTGCATCCAGGGATGACGAAAATGGTGAGAGCCAG CATAAGGGAGATGGATACTGTAAAGTCTCTCATGATCTTGCTTGATCGAG ATGGATGTGATGATATGATACGTGTGAATGACATGACGATATTCGCTAGA CTACGTGCACCGATGTGACCCTCCTCATGTTGTTATCGCTCAAAATATAA TGTATCATTAATTAATTAATACAAGCAGTCTAGGGATGAGGCGAGACTCA ATTAAATTAAATTATACTCCTTGTTTATTTCCTTGCTTCCTTCCCAACTG TCCCAACTGGAGAAGTACAACGTCGGCGCCTTTGGCGTTTGCCCACGAAT CAACTGCCAGGGGCAAAATGTTTTGCCGGTGGGACTCGCCAACGTGCCTC GGGAGGGCACTGCAGCGGTGTTCTGCCCCAAGTGTCAGGTGATGTGCTCG ACGCAGCTTTCCTCGTCAAAACATGTGTTCTTATATTCGTTCACCCTTTT CCTCTTGTACGCTTATCTCTTAATAGTGAAGCTTATTCCTCCATTAATAG CGGAGATATCGGAGATAACGGAGATGCTATTATTTCATTTCACCAGTTCT CCCAGTGCCGTGGCGAGCTGCTTCACCTCGCGCACTTGTATAGTACAGTA TAGTACAGTATAGTATAGCTCTAGTTCTAATGGACTACTTCGTATTTTTT ATCTAGAATACGCGTGTTATAGAGTAATACTATAGAGTACAGTAATATGA TCAACCGCTCAAAAATCACGATAAAATGAACGTCAAGCTATTTTTGGTGA TGTGCTGGTAGGACATCTACAACCCCGATGATGCTGAACTGGGGGGCATC GACGGCGCGTACTTGGGAACGACTTTTGCACACATGTTTCTGCTAGAGTT TCCGGACGTTCGCCCACCGGGATCTAGCGAGGTAAGCTGCGCTATTCGGA GGTGGTGCAAATAAACAATAAACGAGGTGTCATCAAAAGTAGGGAGCGGA CATACGACATGTCTCTCCGATACAGTACGCGGGAAATCTCGGTGCGCATT AGCTTGACTATTAATAGTGTTGGTGTTGAAGGCTGGGACCGGACGGTAAA GGTAAAGAGATTTGAGTCATAGTGTTGAGTTCTTTCAAGCAGCATATAGA GCATATAGAGCATGTCATGTGATGGTGTTATAATCGTAAGTAAAACAATG TCTAAGGTATATGGGAGTGTGGCAACCGGACGTTAACGTTTCACGCACAA ACGCTCGCTGGGGCTAACTACAAAGTATGGTACTTAATAACCACGATGCT ATTGCACAGGCGTATATCCCGCGCATATACGGGTTCAAAATCCACCCAAG TAGCGGCGTTCACCGCAACGAGGACCACCAGGACCAGGACCAGGCACCTT AACCTCCATTGGCTGGAGCAAACGGGGAGGCAGGGAGTGCGAGAGGAAAC GAAAAACAGAAGAAGGGCACGCAAAGGACGTTAAGATGGGTGGACCGCCG ATCGCCTTTGAATTACGGTACACTCATGGACTGTTTTTCCTGAAAGCTTT CCTGAAAGCTGTAGATTTTGTTCTTGTCTCACTTCGATTGAACCTGCGAC TCGCAACCCACTCGGCGCTCGCAGACCGGGCAGTTTTTCTCGAGCCCTGG AGCTTAAGTGTTTTTTCTGGTTCGTGTAAGGTACAAAATAAATGTTAAAA CAGGATGTCATAGTGCAGTATGTCATAGTACAGTATGCCATACACTTTCG TGACTTGTTGACGGTGCCAGATGTTTTGAGTCAGCGCTTCACGGCCTTGG ACGTTGACGCCGTGTTGGCCAATCGGCATTCAATCCCCGCGGATAGAAAG AGTCGGGACTGTACTGTACTGTACTGTACTGTACTGTACCGTGGTGGTGC ATGGGCATCTAACACTGACGCATTTGTTTTTTGCCAGCCAAAATCAATCT GGTACTGAGTACGATATTACTGTATAACTAGAGCGCTCAGCATTGGGCTA GGGGTCATCTGGGGGCAGCGTCCTTATAAAAAGGAGGCGGCGGCGATGGT GGCGGGCGGTGGGCACGCTTCCGCCTTTGGCTTTGGCTTAACGCCCCCAC GTGTATTTGTCGCTTCTTCAGGAGAAAGTACTCCTTGAGCCTCATCGCTG AGGGAGAATCGCCGTTTTCTTTGGAGCAAGAGGGAAAAAGAGGGCGTGGT GCATGAACTAGGCTTATGGAGGGTCGTGCGTTGTAACTTATGCGGTCGCC TTCCGATCGATGGTCATCAATGGTCAATTCCGACGACGGAGGTAGAGAGA GAGAGAGTAAAAGCTGCCTGCGCAAGTGACGTCCTCTTTTCGAATTGCAG TTTTTGAGGTGACGTTGGTTTCAACAGTTTGCATGGGGTGACGGTAATGG TAACGGTAACGGTAACGGTGCGAACTTGATAGCTAGTGGTGAGAAGGGAA TGTGTGCAGCGCTAGCAGGGAGATCTGCTGTGCTGTAAACTTCAGCAGAC TCGACGGAGAGTCTGCGAGTAGAGGTTTCACAGGAGCGCGGTAGCGACAC ACGATGTGCCTCAAGAACAAAAGGAAGAAGGTAAGAAGATGCCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig108:643466..646609+

>mRNA_F-serratus_M_contig108.766.1 ID=mRNA_F-serratus_M_contig108.766.1|Name=mRNA_F-serratus_M_contig108.766.1|organism=Fucus serratus male|type=CDS|length=702bp|location=Sequence derived from alignment at F-serratus_M_contig108:643466..646609+ (Fucus serratus male)
ATGACGAAAATGATGACGAAAATGAAGTACAACGTCGGCGCCTTTGGCGT
TTGCCCACGAATCAACTGCCAGGGGCAAAATGTTTTGCCGGTGGGACTCG
CCAACGTGCCTCGGGAGGGCACTGCAGCGGTGTTCTGCCCCAAGTGTCAG
AAGTACAACGTCGGCGCCTTTGGCGTTTGCCCACGAATCAACTGCCAGGG
GCAAAATGTTTTGCCGGTGGGACTCGCCAACGTGCCTCGGGAGGGCACTG
CAGCGGTGTTCTGCCCCAAGTGTCAGGACATCTACAACCCCGATGATGCT
GAACTGGGGGGCATCGACGGCGCGTACTTGGGAACGACTTTTGCACACAT
GTTTCTGCTAGAGTTTCCGGACGTTCGCCCACCGGGATCTAGCGAGGACA
TCTACAACCCCGATGATGCTGAACTGGGGGGCATCGACGGCGCGTACTTG
GGAACGACTTTTGCACACATGTTTCTGCTAGAGTTTCCGGACGTTCGCCC
ACCGGGATCTAGCGAGGCGTATATCCCGCGCATATACGGGTTCAAAATCC
ACCCAAGTAGCGGCGTTCACCGCAACGAGGACCACCAGGACCAGGACCAG
GCACCTTAAGCGTATATCCCGCGCATATACGGGTTCAAAATCCACCCAAG
TAGCGGCGTTCACCGCAACGAGGACCACCAGGACCAGGACCAGGCACCTT
AA
back to top