mRNA_F-serratus_M_contig108.759.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI) HSP 1 Score: 220 bits (560), Expect = 1.850e-61 Identity = 139/298 (46.64%), Postives = 175/298 (58.72%), Query Frame = 1 Query: 1 MILVYPIGIPVMFAYLLLNRRHKINPFTASTEARP---------VSFDVPVRVFPKHWEATGANAASTDISVMA----TSSTMLSDYRDVDEEAREAAAV----ERPGACVTRQGAPKERFSRRDDSE--------------------------RVREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEIVLTMQ 765 MIL+YPIG+P++FA LLL RR KINP T + + VS D R+ + GA AA+ + A + L+ +D AR +AV E R ER + S + REE L+ RA+D DLQ T+FLWEPYEP YY+ETVECGRRCL+TGALVFV+P+TAGQ GA +FAF+ LL FEL+RPHLS+ DAWMYRIGCI IFFSNFLGL AK +VSDE+A+SQE +G+LLI VH MV AI+ + ++MQ Sbjct: 1373 MILLYPIGVPMLFAVLLLKRREKINPPTQTLDLAAATGPVLMERVSSDT-ARMENEGSGHPGAAAATPRATPTARGRDSGDIELAGMKDTSRGARRGSAVSVASEGDSQYHRRCSGEGERRPLSNGSSGXXXXXXXXXXXXXXXXXXXXXXGLVQDREEVLENRAQDPDLQSTRFLWEPYEPDNYYYETVECGRRCLLTGALVFVLPNTAGQAAGASVFAFVGLLGFELLRPHLSHTDAWMYRIGCITIFFSNFLGLMAKADVSDEEAQSQEAYGLLLIAVHVLMVLAILAQAYVSMQ 1669
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.620e-39 Identity = 101/263 (38.40%), Postives = 144/263 (54.75%), Query Frame = 1 Query: 1 MILVYPIGIPVMFAYLLLNRRHKINPFTASTEARPVSFDVPVRVFPKHWEATGANAASTDISVMATSSTMLSDYRDVDEEAREAAAVERPGACVTRQGAPKERFSRRDDSERVREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEI-VLTMQAASDSRD 786 MI+VYPIGIP+++A++L R +NP RP + D V + T A D S + +S R+A G V+++ P+E EE LQKR ++ DL P+ FLW+ ++P YY+E +ECGRR L+TGAL+F+ P TA Q AC+FAF SLL FEL+RPHL D+W+YR+GC+ IF SNFL L K + + E S + G +LI V+ +V A++ T Q D+R+ Sbjct: 782 MIVVYPIGIPLLYAFILWINRESLNP-----RPRPKATDDDV-------DETTVPAQDADASGWSVAS-------------RKAGGXX-XGEYVSKE-TPEEL-----------EERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRS--ILGGILIAVNVLLVVAVLASTWFATQQTVDDNRE 1004
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.750e-36 Identity = 90/264 (34.09%), Postives = 137/264 (51.89%), Query Frame = 1 Query: 1 MILVYPIGIPVMFAYLLLNRRHKINPFTASTEARPVSFDVPVRVFPKHWEATGANAASTDISVMATSSTMLSDYRDVDEEAREAAAVERPGACVTRQGAPKERFSRRDDSERVREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEI-VLTMQAASDSRDS 789 MI VYPIGIP+++A++L R +NP + + +TG ++D E E P+E +E ++ L+KR ++ DL P+ FLW+ + P YY+E +ECGRR L+TGAL+F+ P T Q AC+FAF SLL FEL+RPHL D+W+YR+GC+VIF SNFL L K + + E + S + G +++ ++ ++ A++F T Q+ DSRD+ Sbjct: 1353 MIAVYPIGIPLLYAFILWRNRDSLNP--------------------RAYYSTGL---------------------ELDGEMSE---------------GPRE-------TEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVLFSTWFATQQSVDDSRDN 1551
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 146 bits (368), Expect = 8.050e-36 Identity = 94/271 (34.69%), Postives = 138/271 (50.92%), Query Frame = 1 Query: 1 MILVYPIGIPVMFAYLLLNRRHKINPFTASTEARPVSFDVPVRVFPKHWEATGANAASTDISVMATSSTMLSDYRDVDEEAREAAAVERPGACVT-RQGAPKERFSRRDDSERVREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEIVLTMQAASDSRDSLVGHLHA 810 MI+VYP+GIP+++A++L R +NP RV + GA V R +R + + +SE + EE L+KR + DL P+ FLW+ + P YY+E VECGRR L+TG LVF+ P+TA Q+ AC+FAF+SLL FEL+RPHL D+W+YR+GC+ IF SNFL L K + S D + ++FG ++I ++ ++ A++ +MQ D G L A Sbjct: 1270 MIMVYPVGIPLLYAFILWQNRESLNP----------------RV--------------------------------------------KTGAVVNPRADGSTDRITYKANSEDL-EEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD-SGVDG-NHDVFGAIMIGINMFLIMAVLLASWFSMQQTMDEYVVAAGTLLA 1477
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI) HSP 1 Score: 145 bits (365), Expect = 2.020e-35 Identity = 69/156 (44.23%), Postives = 103/156 (66.03%), Query Frame = 1 Query: 343 EEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEIVLTMQAASDSRDSLVGHLHA 810 EE L+KR + DL P+ FLW+ + P YY+E VECGRR L+TG L+F+ P+TA Q+ AC+FAF+SLL FEL+RPHL D+W+YR+GC+ IF SNFL L K + + + ++++FG ++I ++ ++ A++ +MQ D G L A Sbjct: 1314 EEKLEKRRRNPDLVPSMFLWKDFGPDMYYYEVVECGRRILLTGVLIFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCMCIFLSNFLALLIKVDSAGDS--NRDVFGWIMIVINLLLIMAVLLASWFSMQQTMDEYAVAAGTLLA 1467
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.430e-34 Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 337 VREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEIVLTMQAASDSRDSLV 795 V EE + +R D + PT FLW Y P YY+E EC RR L+TG LVFV+PDT GQ+ C+FAFLSLLAFEL+RPH + D +YR GC+VIFF+NFL L K V++ D+ ++ V+LI V+ +I + +A+ R ++ Sbjct: 1720 VVEEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMM 1872
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 141 bits (355), Expect = 4.430e-34 Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 337 VREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAI 738 V +E + +R D + PT FLW Y P YY+E EC RR L+TG LVF++PDT GQ+ C+FAFLSLLAFEL+RPH + D +YR GC+VIFF+NFL L K V+ D+ E++ V+LI V+ +I Sbjct: 1514 VVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSI 1647
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.010e-33 Identity = 88/247 (35.63%), Postives = 126/247 (51.01%), Query Frame = 1 Query: 1 MILVYPIGIPVMFAYLLLNRRHKINPFTASTEARPVSFDVPVRVFPKHWEATGANAASTDISVMATSSTMLSDYRDVDEEAREAAAVERPGACVTRQGAPKERFSRRDDSERVREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAII 741 MILVYPIGIP+++A++L R +NP S EA P + TG D++++ + Y D EE L++R + DL P+ FLW+ + P YY+E +ECGRR L+TG L+F TA Q ACIFAF+SLL FEL+RPHL DAW+YR+GC++IF SNFL L K + + E ++ G +LI V+ ++ A++ Sbjct: 1298 MILVYPIGIPLLYAFILWINRESLNPRVRS-EATP--------------QPTGG--VEMDVALVPAN------YGDDLEE------------------------------------RLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEG--NRAALGGILIAVNVFLILAVL 1483
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 135 bits (341), Expect = 3.200e-32 Identity = 70/168 (41.67%), Postives = 101/168 (60.12%), Query Frame = 1 Query: 304 ERFSRRDDSERVREEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEIVLTMQAA---SDSRDSLVG 798 E +R V E + R +D + PT FLW Y P+ YY+E EC RR L+TG LVF++PDT GQ+ +CIFA LSL+ FEL+RPH+++ D +YR GC+VI F+NFL L K+ +D+D+ + V L+ V+ +I F T +A S ++D L+G Sbjct: 1514 EALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLG 1681
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 134 bits (338), Expect = 7.860e-32 Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 1 Query: 343 EEALQKRAEDLDLQPTKFLWEPYEPRTYYFETVECGRRCLMTGALVFVMPDTAGQMTGACIFAFLSLLAFELIRPHLSYNDAWMYRIGCIVIFFSNFLGLSAKTEVSDEDAESQEMFGVLLIFVHATMVAAIIFEIVLTMQAA---SDSRDSLVG 798 E+ + R +D + PT FLW Y P+ YY+E EC RR L+TG LVF++PDT GQ+ +CIFA LSL+ FEL+RPH++ D +YR GC+VI F+NFL L K+ +D+D+ + V L+ V+ +I F T +A S ++D L+G Sbjct: 1252 EQKMSVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLG 1406 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig108.759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig108.759.1 >prot_F-serratus_M_contig108.759.1 ID=prot_F-serratus_M_contig108.759.1|Name=mRNA_F-serratus_M_contig108.759.1|organism=Fucus serratus male|type=polypeptide|length=281bp MILVYPIGIPVMFAYLLLNRRHKINPFTASTEARPVSFDVPVRVFPKHWEback to top mRNA from alignment at F-serratus_M_contig108:484177..487357- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig108.759.1 ID=mRNA_F-serratus_M_contig108.759.1|Name=mRNA_F-serratus_M_contig108.759.1|organism=Fucus serratus male|type=mRNA|length=3181bp|location=Sequence derived from alignment at F-serratus_M_contig108:484177..487357- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig108:484177..487357- >mRNA_F-serratus_M_contig108.759.1 ID=mRNA_F-serratus_M_contig108.759.1|Name=mRNA_F-serratus_M_contig108.759.1|organism=Fucus serratus male|type=CDS|length=1686bp|location=Sequence derived from alignment at F-serratus_M_contig108:484177..487357- (Fucus serratus male)back to top |