mRNA_F-serratus_M_contig108.749.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig108.749.1
Unique NamemRNA_F-serratus_M_contig108.749.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 6.990e-31
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRG----TDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +FS L EIPYP SY+RFL  LD+FNFDI+WPL+  C+V  I FY +LV VT+ P+ +L+ L L+Y  AM  HR     + R S E R++A VRHAS ALL+LFL+FSSVSTTVF
Sbjct: 1227 QFSHLAEIPYPPSYQRFLNILDIFNFDITWPLTAACIVDNITFYHRLVWVTLGPLALLTFLSLTYVIAMHVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTTVF 1340
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.520e-30
Identity = 65/114 (57.02%), Postives = 84/114 (73.68%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRG----TDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +FS L EIPYP SY+RFL  LDVFNFDI+WPL+  C+V  I FY++LV VT+ P+++L+ L L+Y  A+  HR     + R S E R++A VRHAS ALL+LFL+FSSVST VF
Sbjct: 1221 QFSHLAEIPYPPSYQRFLNILDVFNFDITWPLTAACIVDNITFYQRLVGVTLGPLVLLAFLSLTYVIALYVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTAVF 1334
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.220e-17
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +FS +  + YP  Y+RFL  +DV NFDI W +S  C+V   +F++ L+  TI PI+V+  LG +YA A   +RG+D       R    +H S  LLV FL++SSVS+TVF
Sbjct:  716 QFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVD-FDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFR----KHVSAVLLVTFLVYSSVSSTVF 820
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 6.170e-15
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +F+ +  + YP  YKRFL  LDVFNFD+SW LS  C +  I+F+++L+  T++P++ L  L  +YA A+  +RG      E  +    +H S  LL+ FLI+SSVS T+F
Sbjct:  928 QFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGC-IFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRG----KAESLQVIWNKHVSLVLLLTFLIYSSVSATLF 1032
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.520e-14
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +F+    + YP  Y+RFL  LDVFNFDISW LS  C V  ++F+++L++ TI PIM L  L  +Y    R +RG    +    +    RH S  LL++FL++S VS+ VF
Sbjct:  689 QFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGC-VMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRG----NAATLQLVWDRHVSMVLLLVFLVYSGVSSVVF 793
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 5.500e-14
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            ++S +  I YP +Y+ FL+ +DV N D+ + LS  C V   NFY++L++ TI P++VL  LG +Y  A R     +R   E  R  + RH S  L V+F+I+++VS T+F
Sbjct:  713 QYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFAC-VYDTNFYDRLLMATIGPVLVLGLLGCTYVVARR----RNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIF 817
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.590e-14
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +F+ + ++ YP  Y+RFLA L++ NF++ + LS +CLV + NFY +L   TI P+ +L  L   +A A R     +R S    R+A  +H S AL ++F I+SSVS T+F
Sbjct:   56 QFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLV-ETNFYGRLAFSTIVPLAILGGLAAKHAIAKR----NNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIF 160
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.010e-13
Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            +FS +  + YP  Y+RFL  +++ NFD+ W  S  CLV +++F+ +L++ TI P++ L+ L ++Y  A R   G++    + R     +H S  LL+ FL++SSVS TVF
Sbjct: 1447 QFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLV-EVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRH----KHMSMVLLITFLVYSSVSATVF 1551
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.020e-13
Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 2 
Query:  200 RFSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            ++S +  + YP +Y+ FL+ +DV N D+ + LS  C V   NFY++L++ TI P++VL  LG +Y  A R     +R   E  R  + RH S  L V+F+I+++VS T+F
Sbjct:  732 QYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFAC-VYDTNFYDRLLMATIGPVLVLGLLGCTYLVARR----RNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIF 836
[Close]
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.030e-13
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 2 
Query:  203 FSGLTEIPYPSSYKRFLATLDVFNFDISWPLSTMCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRRQAKVRHASTALLVLFLIFSSVSTTVF 529
            F+    + YP  Y+R L  LDVFNFDISW +S  C V  ++F+++L++ TI PIM L  L  +Y    R +RG    +    +    RH S  LL++F+++SSVS+ VF
Sbjct: 2428 FTSAANVTYPDVYQRLLNGLDVFNFDISWIISAGC-VMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRG----NAATLQLVWDRHVSMVLLLVFVVYSSVSSVVF 2531
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig108.749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUJ2_9PHAE6.990e-3157.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTT7_ECTSI4.520e-3057.02Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FRV1_ECTSI3.220e-1743.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI6.170e-1541.82Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI1.520e-1441.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE5.500e-1439.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHA3_9PHAE7.590e-1440.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY65_9PHAE1.010e-1337.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI1.020e-1338.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI1.030e-1340.37LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig108contigF-serratus_M_contig108:25660..28741 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Exons5
Model size530
Cds size228
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig108.749.1prot_F-serratus_M_contig108.749.1Fucus serratus malepolypeptideF-serratus_M_contig108 25660..26490 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928928.3760417-CDS-F-serratus_M_contig108:25659..256891622928928.3760417-CDS-F-serratus_M_contig108:25659..25689Fucus serratus maleCDSF-serratus_M_contig108 25660..25689 -
1690962633.1335332-CDS-F-serratus_M_contig108:25659..256891690962633.1335332-CDS-F-serratus_M_contig108:25659..25689Fucus serratus maleCDSF-serratus_M_contig108 25660..25689 -
1622928928.386062-CDS-F-serratus_M_contig108:26292..264901622928928.386062-CDS-F-serratus_M_contig108:26292..26490Fucus serratus maleCDSF-serratus_M_contig108 26293..26490 -
1690962633.143298-CDS-F-serratus_M_contig108:26292..264901690962633.143298-CDS-F-serratus_M_contig108:26292..26490Fucus serratus maleCDSF-serratus_M_contig108 26293..26490 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928928.3959649-UTR-F-serratus_M_contig108:26490..265131622928928.3959649-UTR-F-serratus_M_contig108:26490..26513Fucus serratus maleUTRF-serratus_M_contig108 26491..26513 -
1690962633.1528785-UTR-F-serratus_M_contig108:26490..265131690962633.1528785-UTR-F-serratus_M_contig108:26490..26513Fucus serratus maleUTRF-serratus_M_contig108 26491..26513 -
1622928928.4053993-UTR-F-serratus_M_contig108:26741..268171622928928.4053993-UTR-F-serratus_M_contig108:26741..26817Fucus serratus maleUTRF-serratus_M_contig108 26742..26817 -
1690962633.1690578-UTR-F-serratus_M_contig108:26741..268171690962633.1690578-UTR-F-serratus_M_contig108:26741..26817Fucus serratus maleUTRF-serratus_M_contig108 26742..26817 -
1622928928.4150066-UTR-F-serratus_M_contig108:28198..283381622928928.4150066-UTR-F-serratus_M_contig108:28198..28338Fucus serratus maleUTRF-serratus_M_contig108 28199..28338 -
1690962633.1771293-UTR-F-serratus_M_contig108:28198..283381690962633.1771293-UTR-F-serratus_M_contig108:28198..28338Fucus serratus maleUTRF-serratus_M_contig108 28199..28338 -
1622928928.424429-UTR-F-serratus_M_contig108:28679..287411622928928.424429-UTR-F-serratus_M_contig108:28679..28741Fucus serratus maleUTRF-serratus_M_contig108 28680..28741 -
1690962633.1852143-UTR-F-serratus_M_contig108:28679..287411690962633.1852143-UTR-F-serratus_M_contig108:28679..28741Fucus serratus maleUTRF-serratus_M_contig108 28680..28741 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig108.749.1

>prot_F-serratus_M_contig108.749.1 ID=prot_F-serratus_M_contig108.749.1|Name=mRNA_F-serratus_M_contig108.749.1|organism=Fucus serratus male|type=polypeptide|length=76bp
MCLVGKINFYEKLVIVTIAPIMVLSALGLSYAGAMRWHRGTDRESVECRR
QAKVRHASTALLVLFLIFSSVSTTVF
back to top

mRNA from alignment at F-serratus_M_contig108:25660..28741-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig108.749.1 ID=mRNA_F-serratus_M_contig108.749.1|Name=mRNA_F-serratus_M_contig108.749.1|organism=Fucus serratus male|type=mRNA|length=3082bp|location=Sequence derived from alignment at F-serratus_M_contig108:25660..28741- (Fucus serratus male)
CAGCTGCGGAAGAAGGTTTCCTATCTGTGCGGCCGGTCTGAGTCCGCCGG
CATCGCCCAGTGGTACGTTCACACACGCTTAGGTTCACGCTTGATAGGGG
TGCGCCGCGGTACATGATTCCACAGAGCACAGTCGGAAGGAGCCCCTATC
CTATCTAAAACCTTATTTTTCAATGTTTAGGGCATCGGCGTAAAGCAGCG
CTAGATATTCCTAGAAAGTTTGTTTTGATCAATATGGCGCCAGTGAAGAA
TAATATCTAAAATGCAAGCGTGCAAGGAGGCTGACGGGGCCTCGTACGAG
GTGTTCTTCGGTAACGAAGGCGTTCCTCGAGCACGAGGAGCGAGGGCTGC
ATCGCCCCGTCTACTCCCGCTCTAACCTCATTTGTTTCGCACATCCTGCC
CAGGCCTGTCGGAGAAGGTCTTGACACGGACCAGAAACCACAGGGAAATG
GCGACCCAAATACGCGGGCCGGGGGGATGACCACCCGCCTTCTTCGTGCC
ATTCCGTTCCAGCAGCTCAAGATTTTGATAGGCGAGCATACGGGTTCGAG
GAGGTATATAGGCTTCCGTGTGCTATCAGTCACCCTTTTCGTGAGCGAGC
ATCCGCGCTGAGTATGGCGTTTCGTGTTGTGTTCTGGTGTTACATGAGGC
ACAAGTGCTTCGCTTACCTGATATCCCTAAGATGAAGACGGTCGACCACC
CGTTTTTGAATGCACGCCATTGACGCCTCCGCCGCTCACCTGTTCTCGTC
TTTTGTGTTTTACCCCTCCGCCTTTGCCGTTGGTTGAATCTGCTTCGGAA
CCGCCTTCTGAAAATTATCCGATAAAAAAACGGTAAATCGACATTTGTGG
CTTGCTTCGTCGTTAAACTCGCGCAACACGCCAAACTGCACCCCCCTGCC
GATTCTTCTTTCCGATGGGCCGCGGCGGGCGCCGGACTTGCGTACCCATT
TTTCCCTTCGCGCCAGTTGTGTGGCAGATGCTGACACAGGTGATTTATTG
TCTTAATTCGCTATAAAAATAGTTATATATATATATATATATATATATAT
CCAGGAGGCGTGCGCAGCTCTACGGTAGACTTGCTAATCTCACCCCCCTG
GATGATAGGCTCTCACCCCCTCTCCTCCCTTGTCAGAAACAGTCGCGCCC
GTGTGCTCGGTTGGGCACGTAGAACGCAGAACCTCGTGCGAAGCGCTCGA
TCCCGCGATGGAGACGAACATTTCTATTTCGGATAGAGCGATTTTGAAAT
TCCAAAAATGCCGTGGGTACAGTATAGTACAAGTGTTAGCTCTCTCCAGC
ATACGCTATACGTCGTCCCGTATGTGACGGAGTATATTCTGAATCCCCCT
TGGTGTTTAAAGAAAAATCTGAACACGTCTAGATCTTCTGAGCATCCCAC
ACAGGGGGAAATGTCAAAACGCTTAGATGGGATCATAGGCTGCATGTGCG
ATACCCCGCTTGTGCACGACCTTTTTTTGCTAAAAGAAAAAAAAACATGT
TCATCCATATCCCTGGAACGAAAACCCTAGGGTTTTCGCCCTTGAAAAGT
TTTTTGCCCTTTCGTCTACACAGTATCCCCCCTCCCCGAGCTCCGTTGAG
GCTTACCTGTTGTACTTCAGGCGTGTTGCCACTGCATAGGGAATTATTGT
GGTGATTTCGGTCCGAAACTGTTACCGCCGGGGGATGGCACTGCATATTA
TTCCTAGCGTAGAGCTAAACCCCGTCACCAACCATAAAGGCGTAGAGCCT
ATATGATCAGCTCGCGTAGTAGAACATGTTTCCCCACGTCGCGTTCCATA
TTTCCCTGTGCTTGCTGTTGGAGGCAGCTCCAAACGGCCGTGTACCCACG
ACCGTAATATTGCAGCGCTGCTCGGTTCACCTTTCCTACGCCTCTCCTCT
TCGCGCCCTACCCTCGCCCCCCAGTTCTCTGGTCTTACAGAAATTCCTTA
CCCGTCCAGCTACAAACGGTTTCTGGCGACTCTAGATGTGTTTAACTTTG
GTGAGAGGGGGGAACGGGACAGGAACAGCCGGCCGCCGACATTTTGCCCG
AGAACTGCGACTTACTCTTAAAATTACGACTAAGGTGGTAGGAGACGCAG
GGAGTAATCGATTTATTTCACCGAAGCTGCGTTTTTCCTGCAGCTTGAGC
TCTAAAGGGTTTGCGTCTCCTCTATCTCTTCACCCCCCCCCCCGCCCTCT
ATTTCTCGTCCGCAACCCCTTCGATCAGACATCTCGTGGCCCCTCTCTAC
TATGTGTCTCGTTGGAAAGATCAACTTCTACGAGAAGCTCGTTATCGTGA
CCATCGCCCCCATCATGGTACTGAGTGCGCTCGGGCTCAGCTACGCGGGC
GCCATGCGATGGCACCGGGGTACAGACAGGGAATCAGTCGAGTGCCGCCG
GCAGGCCAAAGTGCGGCACGCCAGCACCGCACTGTTGGTGCTTTTCTTGG
TGGGTTTCCAGTCGAGACGGGGGGCGAGAGGGGGAGGGGGGTAGGGGGGT
AAGGGCGCTTCTGCGAAAGAGAGAAAAATATGCGTTCCTCTCGTGGGCCT
TGGTTGGTCATAGGTCGGTCTTCGATCAAGAGGTCCCGAACCCGGTTCTT
GATTCCAGCTGTGCATATTCATTTCCCAGCTTTCCGGCAATAAGAGTCGT
ATGTTGTGTGTGTTTATGTGGATGTGTGTGGGTGTGGGTGTGGGTGTTCT
GCTTGATGGAGAACACCATTTTTGATGGTCAGGGCCATCCCACAAGTTGA
AACAGTCTCACCCTTGACGGCCACGATGACGTGTGCCACTCGACCCCGAT
CGATTCAACCTGTGACAGGAAATGTAATTGATTCTTTAAGTACAGAGGTT
CCGTCGCCGGTACACAAGAAATGATTCACGCCATGGATGGATAATGTCTC
ATGTAGAGTATCGCGATAAGTTGGCAGAGCAGTAGCATCCTTTCAGAACC
TTCGTGTTCGGCGAGAAGCGGTTGACTCATCGCTCCTCGTCACCAAGTAA
ACGGCGCCGTGACTCCCTTCCGATCGACCTCGTAATGGCAACAACATCGC
AGATTTTCAGCTCTGTCAGCACCACGGTTTTC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig108:25660..28741-

>mRNA_F-serratus_M_contig108.749.1 ID=mRNA_F-serratus_M_contig108.749.1|Name=mRNA_F-serratus_M_contig108.749.1|organism=Fucus serratus male|type=CDS|length=456bp|location=Sequence derived from alignment at F-serratus_M_contig108:25660..28741- (Fucus serratus male)
ATGTGTCTCGTTGGAAAGATCAACTTCTACGAGAAGCTCGTTATCGTGAC
CATCGCCCCCATCATGGTACTGAGTGCGCTCGGGCTCAGCTACGCGGGCG
CCATGCGATGGCACCGGGGTACAGACAGGGAATCAGTCGAGTGCCGCCGG
CAGGCCAAAGTGCGGCACGCCAGCACCGCACTGTTGGTGCTTTTCTTGAT
GTGTCTCGTTGGAAAGATCAACTTCTACGAGAAGCTCGTTATCGTGACCA
TCGCCCCCATCATGGTACTGAGTGCGCTCGGGCTCAGCTACGCGGGCGCC
ATGCGATGGCACCGGGGTACAGACAGGGAATCAGTCGAGTGCCGCCGGCA
GGCCAAAGTGCGGCACGCCAGCACCGCACTGTTGGTGCTTTTCTTGATTT
TCAGCTCTGTCAGCACCACGGTTTTCATTTTCAGCTCTGTCAGCACCACG
GTTTTC
back to top