mRNA_F-serratus_M_contig1079.745.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1079.745.1
Unique NamemRNA_F-serratus_M_contig1079.745.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1079.745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1079contigF-serratus_M_contig1079:144246..149310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size254
Cds size252
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1079.745.1prot_F-serratus_M_contig1079.745.1Fucus serratus malepolypeptideF-serratus_M_contig1079 144248..149310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928926.608776-CDS-F-serratus_M_contig1079:144247..1443271622928926.608776-CDS-F-serratus_M_contig1079:144247..144327Fucus serratus maleCDSF-serratus_M_contig1079 144248..144327 -
1690962632.7329204-CDS-F-serratus_M_contig1079:144247..1443271690962632.7329204-CDS-F-serratus_M_contig1079:144247..144327Fucus serratus maleCDSF-serratus_M_contig1079 144248..144327 -
1622928926.6267226-CDS-F-serratus_M_contig1079:147460..1475911622928926.6267226-CDS-F-serratus_M_contig1079:147460..147591Fucus serratus maleCDSF-serratus_M_contig1079 147461..147591 -
1690962632.7411702-CDS-F-serratus_M_contig1079:147460..1475911690962632.7411702-CDS-F-serratus_M_contig1079:147460..147591Fucus serratus maleCDSF-serratus_M_contig1079 147461..147591 -
1622928926.6418905-CDS-F-serratus_M_contig1079:149269..1493101622928926.6418905-CDS-F-serratus_M_contig1079:149269..149310Fucus serratus maleCDSF-serratus_M_contig1079 149270..149310 -
1690962632.7500515-CDS-F-serratus_M_contig1079:149269..1493101690962632.7500515-CDS-F-serratus_M_contig1079:149269..149310Fucus serratus maleCDSF-serratus_M_contig1079 149270..149310 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1079.745.1

>prot_F-serratus_M_contig1079.745.1 ID=prot_F-serratus_M_contig1079.745.1|Name=mRNA_F-serratus_M_contig1079.745.1|organism=Fucus serratus male|type=polypeptide|length=84bp
SRRAYCGRNRDWRGHDLAAAVRAMAIRDLQFNSQHPAHTCVRTDSGNGDL
SSGAGHLETPREEEGVCAGACSMGDAIAGCSRAW
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mRNA from alignment at F-serratus_M_contig1079:144246..149310-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1079.745.1 ID=mRNA_F-serratus_M_contig1079.745.1|Name=mRNA_F-serratus_M_contig1079.745.1|organism=Fucus serratus male|type=mRNA|length=5065bp|location=Sequence derived from alignment at F-serratus_M_contig1079:144246..149310- (Fucus serratus male)
TCAAGGAGAGCCTACTGTGGAAGGAATCGGGACTGGCGAGGGTGAGGCGA
CCTTCAACAGTTGACTTATATTGTGTGCATTTTGTGTGGATTAATGGGTG
GTCTTGAGTTATTGTCGATGTAAAACAATATGTCTAATAATTGCAGAAGA
TCTTTGTCATGCCATTTGCGGCGGTTAAAAATCAACGACCAAAGAGCGGT
GATTGTATGCCCCTTTGTCTTGGCGTAGTGGTTTTTTCCTACTTATTTGC
TGTATATGAAATATTTCGTATTAGATAGTGGCTGTAATTTGCATTAAACC
ACGCAATCCGACCCTATTCTGCACTTATAGTGGTTTTGGTTACGAAAACC
TCTCATCAGACGCGACAAAAGATGTGCGCGGGCATGTGTGTGGTTGTATG
TGTGTCTGTCTGTGTGTGATGTTATCAAATAGCATGTAACCGCGAAATCT
GGCCCTGTAATCCCAGTCACGTTATGTCATTTGCACTGGTCCTCCCGACG
GGGGGATCCATGATACTTATTACGAAGTGTGTGCTTTTGTGTGTACGAGT
GCGTGCATTTTTTAAGTTGCACATAACCGCGCAATCCGGCCCTGTTATCC
TAGTCATTCCATGCCACTCTCGCATTGATCCTCCCACGGGGGGATCAATG
ATACTTATGTGTGTGTATTTATTAATTTATATATAACCGCCCAATCTAGC
CCTGCCATCCTAGTTATTCTATGCCACTCGCATTGATCCTCTGAGGGGGG
GATCAATAGTATAAAGTATTACGAAAACCTTTGATCAGGCGCAACAAAGT
GGCCATACCCTCTCTACTTACACAGTTATATCTTTAAAGCCCTGGCTCCT
AGTTTCTTGATATTCCCTAGATCACCCGAGTTAGTAGCTACCGGACCAAC
CCTTTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTGTCCGTGCGTGCG
GCTGTGCGTGTATTGATTAAATTGCACATACCCACGCATTCCGGCACTGA
CATTGCATTAACAGTCATTATGTGCTACTCGCATTGGCCCTCCCAAGGCG
AGCTCAAGTGTGTGCTCTCGCGTGTCTTCATTTGTGTGTTTTTCTTTTCC
CTATGGTTTATGGTTCTTGTTATGCTCTCCTCCCGTTCGAAGCCGCTATA
TATACCGTACAGTGCACAAACCACCCCTCAAAATACATATCATGTCTCGA
CTGTTACTTATACCCCTTGTCGGTATGCCTGGCACACTGACTTTTTTCGA
GTGTTACGTAACACTGCCGATCCTTTTTTGCTTGGAGGTGTATTTATAGC
TTTTTCGTTATCCTTCCGGATGGCGGTGGTTTTCTACGCGGTGACCAAGG
ACTGGGTTTTTACATCAGCTTATTATACGAGAATTCAATCAATCATTAAT
GTTGTAATGGTTTCAATAACAGGAGCCGGGCTGTTTGCATTTTTGGTGGC
AGCAATATCATGGGTACTACAGTACAAGTGGGTTTTAATGATTCTAGTGC
TCGGTAGTATATCGAAAGCCATTTGATGCTGGTAAAGGAACGTGGCAAAC
TTTATTTTTGTATTAAGTGTCCTCACAACAATTATAAGGGGGGGGAAAGG
AAATACTTTTCGTCCGCCACGTCGGATAGGGGTCTGACGTTTCTATAAAC
ATTATAAAATGAATCAGGTACCATATGTATATTTGACAAATCAGTCACTA
TTTTGTGTGAAATGACCAGGCATGATCTTGCCGCCGCAGTCCGAGCGATG
GCTATCCGGGATCTTCAGTTCAATTCCCAGCACCCAGCGCATACGTGCGT
TCGTACGGACTCCGGAAATGGTGACCTTTCTTCTGGGGCTGGCCACCTTG
GTGAGTGGGCACGTACTTGTCAGTTTTTGTTTTATTTATTATTGTAATTG
TACAGACTATATAATACGTTTTTCTCGTTTTTGCCAGCAGTATGTACTCC
GTCCATTTTGTTGCTGTACTTTTTTTTTTTTCAAGAGACCGCATAAGCAC
GACCTGACCTCTCTGTTTCCCAGATACCGCTTGTTTTGTGTTACTTTTGC
GCGAGTCAAAACAAAAGGGCAAGGTTGAGGGGAGATGCGGCCACGCTGAA
AAGAAAAAGAAGAAATGCGTCACTTGACAGATAAGGCAGGAAGCAAGAGT
AATACTACTACCTGGTACAGGGTTACCAGTGCCGTACTTATTTTCGGCAA
ACACTGTCTTCCTGGAGAAATGGTTTCACGTTGTACCGGACTTATGTTCG
GCAAGCACAGTCATCCTGGAGAATTGGTTATAACAAAAAGCCTTTGAATA
CTTGGATTTGTTTTGTAACAACCGTAGGACAGTACTGTTCCCCTTGTCGC
GGTAATGTTCTTACCACAAGTGGGGGCAGAGCGAGGGTCGATCGACAGCA
AATGAATTAGTTGATCTACTGCCCGCTGCACAGGTGCTCGCTGTCCGATT
TGGTGTTTGTATTTTTCCAGGAAACACTCGCGCGCAGTCAAAGTGTACTG
GATATACTATAGCGTAGTGATCGTTTTTTTCACCGTCTTCTCCTCGTGAT
GAGTGGTAATCGAATGCTGTTTAGCTTCAACGTCGCCGTGGGATTCCAGT
TCAGTCTTCAATCTTGAATGTATTTTTTTGGTCTTGCGTTCTCTTCGTGT
ACCGGTATGAAAAAAAAATCGAAGGGATTATACTTGACTTGATGTACGGA
GCAGTTGCATCCCCCACACGAACACCCCCTAAGAGATTTTCACAAGATCG
AGACAGTTCGTGCCGAACTTCCTTGGAACCAAGAGTTTTGTTTTGCATCC
TCCTACCCCCCCCATCCCCCCCCTTTCCCCTCCGTAAGCGTAAATAAAAA
CTGGTAAAATATATGAACCAATACCCCAAAAACAATGAGCATTTCCAAAT
TTAGGGAAGAAAAGGCCATGCCTACTCATATAGCTGTGGCGTAGGAAGTA
GATCTGACCAGCATTAGCTATGCGTCGTGTGTCTACTCTATGTGGTTGTG
TCATGGCCGTTCCTTGCCCCACCCCTCCCCTCCCCCATGTTCGTCCCTTG
ACTTCAGCTGATCGTTTTCACGCCTATGCGATAATTATGTTCCTCTCGAC
TTTCCCCGTGACGCGCACATCATGTTAAAAAAATATACGCTCAGATCTCG
CTTATAATTTTTATTTTCGATGTGATCACCATGAAGACCTTCCGGGCGCT
CACTGTGACGGTTTTCTTGTCGGCGGGGGGGTTTTATATCCTCCTCATTC
AGCGACCGAGGTACCTCAACGAGGCCGATCAAGGTAGGGAGAGGGTAGTA
AAGCCTGCCCCACTATGTGCGAAAACCTCCACGATCGCTTCCGAGGGTCA
AAACATTTTTAGAAGTCCCCCCGTCTTATTTGAAGTGTGGTCAAATTGGT
TTTGCTTAGGATTTCGTTTAAATGTTTTACCGTCGGTCGAGAGGGGATTG
TTTTGGCCGCAAACAAACGAACGAGTGTAACTAGACATCTCTAATGGCAC
TTACTGTATACTAAATTCGTAGGTAACTAGGCCAATCGGTGAAAAAAAGT
GACAACACATCCAAAGTTGCTGCCGGAATTTCGCTTCCAAGCTAAAGTTT
CCGATTGTCGAGATTTATTCGGGATTTAGTAGACTAGGATCGGACGGTAG
ACTAGAAGTAACTCAATTTGAAGACTCGTAAGTATTTTACTTCCTCCCCG
GGGTTTCCACTTTCGAATCAAAACATCATACCTGGTATGCGTTGTTTGAA
TATAATATTTCGGCGCGGGACACATGTGAAGGGAAGACCTGGCAGTAATA
ATAGCATAATAATAATTTCTATATCTGGAGCAACGCCTAATCTCCCAATG
AGGTGTCAAGGTTTGGGAGAGTTATGTGGGTTGGCCAAAGCTAAACCACC
ATTTTGAACCGGGAATTTCTTGGGAGACAAATTTCTGGTTCGTAGATTCA
CAATATACGCCGTGTTGAGCCCTTCCAACAGCAATATTTCGTTATATGAA
ATTAATACAGAGTGGCAGCACATGTGGTAAAACCGTTACACGACTCGACA
CTCTCTTTTTCTTCCCTCCACTGCGCGATAACAAAAAACAATCGGCAGTG
CTCGCGGAAAATATGGAGGCAACAGCGGCGGGTGCCTCCAATAGAGTCAT
TGCCAAGGAAGAGCGTCGATCGATGTTCCACTACTTCACCCTGCGCCCGC
CGACCCCCCTCGAAAATGCTTTCGCTTATGAGGACGCTCCCACCGGGGCC
AGCACACTCTCCGGGGCAAGTACACTTTCCGGCGATGGTGACGGGTGGGG
AGCGGAGGATTTCTCCAGGAAGGCTCTCGACCAAAGTTTCTCGTACGGTG
ACGAGGCTGGAAGAGCCCAGAGTGGTCATACCCTGAATGCGACTGTTCCT
CCGCGTGACGGTCACCTGGGAGGAGGTGAAAGGAAAGTTCTCACGAAAAG
GGAAACCCGCACCGTGGAAATTGAGACGCGAAGGGTCGAGCGTAGGTCGG
GATCGGCCTTGAGGAAAGTGTTCAGCAGACCGAGGTCTGATGGCGTCGAT
GTAATGGCGAGCATCGGGACGGGCGCACAAGGGCAGCAGCCCCCCGACAG
GGCGGCGTTCGGAAAAATCGTCGATGGTAGGTTGGCGGGCGATTCTTCTC
CTGCCTTGTTGTATGTTATGCTCTGGGGAGATATCTCGGCAGGACGAGCA
TTAAACCAATGTTTCGTGCATTTGCGCCGAATATTTGAGCAGAGAAAAAA
TGATACTTTGATGCCTCGCGATGCCGAACGCTCAACGTCGACGAGTGGGT
GGGAAAGGAACAAACCAAAAAGAAACAAAAACAAGAAATCAAAACAGGGC
CAAATGCCCGAACATTTGTTTCTAGTTTTTTTAACAGCCCCCCCCCGCCC
CACCCCGCCCGACAGAAAACAAACAAAACGCCTTCCGGCGCTGCTTGTAT
CTTCTACTGCATGTTCTCGATTCTCAAAACAAGAAACTCCACGGGAGGAG
GAAGGCGTTTGTGCCGGTGCTTGTTCTATGGGTGATGCTATTGCCGGTTG
CTCGAGAGCTTGGCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1079:144246..149310-

>mRNA_F-serratus_M_contig1079.745.1 ID=mRNA_F-serratus_M_contig1079.745.1|Name=mRNA_F-serratus_M_contig1079.745.1|organism=Fucus serratus male|type=CDS|length=504bp|location=Sequence derived from alignment at F-serratus_M_contig1079:144246..149310- (Fucus serratus male)
TCAAGGAGAGCCTACTGTGGAAGGAATCGGGACTGGCGAGGTCAAGGAGA
GCCTACTGTGGAAGGAATCGGGACTGGCGAGGGCATGATCTTGCCGCCGC
AGTCCGAGCGATGGCTATCCGGGATCTTCAGTTCAATTCCCAGCACCCAG
CGCATACGTGCGTTCGTACGGACTCCGGAAATGGTGACCTTTCTTCTGGG
GCTGGCCACCTTGGCATGATCTTGCCGCCGCAGTCCGAGCGATGGCTATC
CGGGATCTTCAGTTCAATTCCCAGCACCCAGCGCATACGTGCGTTCGTAC
GGACTCCGGAAATGGTGACCTTTCTTCTGGGGCTGGCCACCTTGAAACTC
CACGGGAGGAGGAAGGCGTTTGTGCCGGTGCTTGTTCTATGGGTGATGCT
ATTGCCGGTTGCTCGAGAGCTTGGAAACTCCACGGGAGGAGGAAGGCGTT
TGTGCCGGTGCTTGTTCTATGGGTGATGCTATTGCCGGTTGCTCGAGAGC
TTGG
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