mRNA_F-serratus_M_contig1074.714.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI) HSP 1 Score: 1047 bits (2708), Expect = 0.000e+0 Identity = 639/1181 (54.11%), Postives = 727/1181 (61.56%), Query Frame = 2
Query: 47 ATLPGPSSDGGWPETKCCPPPNLVREYREEXXXXXXXXXXXXXXXXEAPPSSSTC---------------ATVSGRAG--ITGDRTYVGGGVMGARGMDGHRSSSQAMRNGGSGFDMEAFDTEAVATISAPNYGTTVRCDEDDDWMSDAEEKGPLFTPPAFQNGKPEARAGHKRGRSTPIQSPVGYGSDDDGDGRGKKKGRSEHCSTQALRRPRSSSLSLTPPRLAAFDSDEDASDDELTARRGSVAKKKGQRKGFRGCRLSRPRVSSVGGAATGERGERSDRGRKRGHEELLNDRIEAMRVGSDGEGSVNGSVSGCGGRRGGGDCGRVRTEPVDSDELVGEGRRLPRCRRGGGGKSGSAFDDLRREGQQIQDQDEEDRDDEMDAADLKPSIENPTWLGPLEAFDLCGGGFINPSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELKRRRRQGLPASTTGLPWLIVAPASVARVWMEHLETWGYFSTYHLESGKDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESG--DGIDPRAVLFRKFHPTGEECAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKFLMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSLLKTLRAKYAASAAAAAAGAGDRSIADEVPGAALAMEADVADSSITNRKKECDHKLRGSK-------VDTADEAELMSAMQEAVGQAKEE-MKDDRQEXXXXXXXXXXXXXLGMDAYTHDQLVAKDEGEEELPEEA-SASEMELPPLPFGGRRNAFECTMTSP 3505
A + P SDGGWPETK C PPNL S++ A SGRAG ITGDR Y G G+ R A R G G + + A G+ D++WMSDAE+ TP A + P RAG G +D+ R L+ P AA GS A VG RGRKRGHE+ LN++IEAMRVGSD EG G V P +D DLKP IE+P WLG L FDL GGFINPSINRYL+ YQREGV+WLY K+ AG+G +LGDDMGLGKTVQSIAL+++VL K+GT RD EEL+RRR++GLPAS+TGLPWLIVAPA+V W++ ++ WG+F+ Y LESG+D DDLM +L AGR EVV TSYDLLR DRLK+ RFDAV+FDEYHT+KS+++MVSQAA EL KRVFGLTGT+IQNDMKELWFL HLIDP +VGEQ+RF EHFSEPIKRARAMNATA+DRRLG+KRLKEL+ +R KNMIRRTK+E L DVLKGKSDTVVFCDLSEVQR+LY R L+LPEFQLL RA EPC+CGR G P RA CCHK P G DG+DPRAVLFR+ HPT EC KCPFCCQL AVSKLQKIANHPCLLQEN RD KR+ QR FAE+ FT++ +E MGGL+RSQKFL S+VG CGKM SLE LL F+ +RDKVLVFSWSTAMLDVLES V +KGY YRRLDG T KERQAR+ EFNSDR GVFVFLISTRAGGQGLNLH+ASRVVLYDVNWNPA QAQDRAYRIGQK KVAVFRLISKGTIEE+CYMRQIYKLQITSAAMGDQ RGGRRQF AVQGSK Q+GELFGIQNLLKFSDDSLLKTLR K+ A AAA A G GAA + GSK VD ADE +L+ AM+ A+G +KE K + + LG+DAYTHDQLVAKDEGEEEL EE+ +E+ L PLP GG RNA E + P
Sbjct: 176 AKVARPGSDGGWPETKRCSPPNLKASLISNGRGAACRKTEGGSGDSRGDDSANGSKGNGKXKGQSARDGDAASSGRAGLGITGDRWYGGAGIT--------RPQPTAQRRTGDG----------IGSAGAAAAGS------DNEWMSDAEDPRGA-TPNAIDS--PTRRAG---------------GLNDEEXXXXXXXXXXXXXXXXXXXXXRKELQLLSNPATAA----------------GSTA---------------------VG------------RGRKRGHEDFLNEKIEAMRVGSDEEGPHAGGXXXXXXXXXXXXXXAVTMGPDXXXXXX-----------------------------------------XVDYEDLKPHIEDPPWLGKLVPFDLGEGGFINPSINRYLRDYQREGVRWLYAKFQAGQGGILGDDMGLGKTVQSIALLASVLRKSGTGRDSEELRRRRKEGLPASSTGLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLESGRDADDLMVALKAGRYEVVATSYDLLRACVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVFGLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEPCNCGRSGRPTRARCCHKTPDSRGGGGDGVDPRAVLFRRLHPTLMECDKCPFCCQLPAVSKLQKIANHPCLLQENIRDPEHKRQQQRQFAEVAFTDRAREIMGGLERSQKFLDVSKVGVCGKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNSDRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVAVFRLISKGTIEEMCYMRQIYKLQITSAAMGDQARGGRRQFNAVQGSKEQQGELFGIQNLLKFSDDSLLKTLRMKHEAGLAAATATGG---------GAAXXXXXXXXXA--------------GSKGVGGIAGVDAADEEDLVVAMKNALGLSKEGGAKGEGEGPPEDNELAGLLGDLGVDAYTHDQLVAKDEGEEELAEESCGVAELTLSPLPSGGARNAMEEKIAMP 1201
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI) HSP 1 Score: 529 bits (1363), Expect = 2.000e-157 Identity = 321/710 (45.21%), Postives = 440/710 (61.97%), Query Frame = 2
Query: 1121 EEDRDDEMDAADLKPSIENPTWLGP----LEAFDLCGG--GFINPSINRYLKGYQREGVKWLY--TKYVAG-EGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELKRRRRQGLPASTTGLPWLIVAPASVARVWMEHLETWGYFSTYHLESG------KDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVF-GLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDE-SGDGIDPRAVLFRKFHPTGEECAK---CPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRM----FAEMVFTEKTKEAM--------GG-------------------------LDRSQKFLMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEF---NSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSLLKTLRAKY 3070
++D DDE + LKP+I NP + P L + GG + S NRYL+GYQREGV+++Y ++ G +G +L DDMGLGKTVQ+IAL+ A+L KTGT RD+ ++KRR+ S G P LIV P SV W HL+TWG+F T + SG + + + + L AG LEVVV + + L + +FDE+H K+ + ++A +L VF GLTGT++QN++ E W L + + P VG Q F HF+EPI R R A+ AD LG +R+ E+ R K ++RR K+ +L D+LKGK TVVFC+L+ VQ+ +Y L+LPEF+LL A++PC CGR A R SCC P D+ S D +DPRAV++R+FHP E C K CP+CC +A+SKLQK+ANHP LLQ + H+ + FA + F+E+ + M GG L R + FL R TCGKM +L+VLL+ F +++ KVL+FS+STAMLD+L++L +S+GY + +LDG T +RQ + F N+ ++ VF LIST AGG GLNL +AS+V+LYDVNWNPA +AQA+DRAYRIGQ +V VFRL+S GTIEE+ YMRQIYKLQ ++A MG++ GG RQF VQG + ++GEL+GI NL+KFS +S+L LR KY
Sbjct: 237 DDDLDDEGEG--LKPTIRNPPFEDPGKRPLVLTNEAGGERAEVPASANRYLQGYQREGVEFMYRRVRHTDGPKGVILADDMGLGKTVQTIALLLALLKKTGTRRDRMDIKRRKDCKGHVSVAGKPVLIVCPRSVLPNWTGHLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKD-ILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDA-RSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKMLDDIAFANVAFSEEARVIMADLPGQHGGGAVSGSSIGXXXXXXXXXXXXEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERF-KNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVF--LISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGEKAEGGLRQFEGVQGVREEQGELWGISNLMKFSGESMLLELRQKY 939
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: A0A8K1CPK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPK2_PYTOL) HSP 1 Score: 449 bits (1155), Expect = 2.960e-130 Identity = 277/666 (41.59%), Postives = 387/666 (58.11%), Query Frame = 2
Query: 1124 EDRDDEMDAADLKPSIENP-TWLGPLEAFDLCGGG---FINPSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELK-----RRRRQGLPASTTGL-----PWLIVAPASVARVWMEHLETWGYFSTYHLESG-KDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEECAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKFLMASRVG--TCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSLLKTLRAKY 3070
+D D++++ D P + +P L PL GG + +IN YL YQREG ++L+ Y GA+LGD+MGLGKT+Q IAL+SA+L K G RDKE + RR R+ +T P LIV PAS+ W L W +T L ++ + L+ + G EVV+ SYD+L++ DR++R +DAV+FDE H LK+ S ++QA + KR GLTGT++QN+ KEL L I P +G +F ++ + IK R +A K+ K+L + +RR KE S K D VVFCDL+ Q Y R L +PEF+LL+R E CDCGR A +R CC++ P + G + RA+L+ +FH GE C CP C L +++L K++NH LL+ N D E + +Q FA E + +A+GG+++ F +G TCGKM LE LL + R R K L+FS ST MLD+L+ + SK +Y RLDG T +ER V FN + VFLISTRAGG GLNL +A+ VV++D +WNPA++ QAQDRAYRIGQ V V+RLI+ GTIEE+ Y+RQIYK Q++ + +G R F VQG + Q+GELFGI+NLL + + +LK ++ Y
Sbjct: 397 DDEDEDVNEIDRWPMLPSPEVSLDPLVLKSPIEGGEDLTVCANINSYLFSYQREGAQFLFNAYAQHTGAILGDEMGLGKTIQVIALLSAILKKQGDYRDKESWRQLRTERRARRSENGATFSENDGPNPLLIVVPASLLHNWESELHVWMSCATVILHGKPEERERLLDQIERGEHEVVICSYDILKITLDRIRRTPWDAVVFDEMHCLKNPESKLTQAVKNIPCKRKLGLTGTLMQNNEKELHCLIDTIAPGVLGSWQQFRSYYGDDIKYGRKKSAAPEAVERSRKKEKKLRQVLVPYYLRREKEINPSFQEVKKRDQVVFCDLTPYQLAAYERILEMPEFELLRRGEELCDCGRDSARKRKECCYQTP---ASMGTNQRALLWERFHSNGEACNSCPNCMGLVCMAQLLKLSNHMELLKVNPHDPPELQEYQAQFAATALGEDS-DAVGGVNQVTTFQEMRDIGSKTCGKMVVLEKLLAVWKRKRQKTLLFSRSTRMLDILQLFLISKAVSYLRLDGNTKVEERLQLVNRFNDPESNISVFLISTRAGGLGLNLPTATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTL--KGVKAPRYFEGVQGDRRQQGELFGIRNLLCWKEGGVLKGIQDSY 1056
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: V4KFN1_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KFN1_EUTSA) HSP 1 Score: 436 bits (1121), Expect = 3.640e-129 Identity = 262/652 (40.18%), Postives = 372/652 (57.06%), Query Frame = 2
Query: 1115 QDEEDRDDEMDAADLKPSIENPT--WLGPLEAFDLCGGGFIN-----PSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELKRRRRQGLPASTTGLPWLIVAPASVARVWMEHLETWGYFSTYHLESGKDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEE-CAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKFLMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSL 3046
++EED +DE +P + + GP E L G I SIN L YQREGVK+LY Y G +LGDDMGLGKT+Q+IA ++ V GK G D L+ + P LI+ P+SV W W F + G + D ++ L AG +EV+VTS+D R+ L I ++ V+ DE H LK+ S + +A L + K+ GLTGT++QN M EL+ L + P S+G + F E + EP+K+ + A ++ DKR + L ++ K M+RRTKEE + ++ GK D VVFC +SEVQ+ +Y R L LPE Q L + PC CG +++ CC +I P ++ H + C CPFC L + KLQ+I+NH L++ N +D EK++ F VF + +GG+ S+ F+ S V CGKM +LE L+ S+ DK+L+FS+S MLD+LE + KGY++ RLDG+TP RQ+ V +FN+ VFLISTRAGG GLNL SA+RVV++D NWNP+++ QAQDR++R GQK V VFRL++ G++EE+ Y RQ+YK Q+++ A+ G+ R F VQ K +GELFGI NL + D L
Sbjct: 88 EEEEDEEDEKPTEFGRPGLSRAEFDYTGPYEPLVLSSIGEIPIIQVPASINCRLLEYQREGVKFLYNLYKNNYGGILGDDMGLGKTIQTIAFLAGVYGKDGDSGDTSILESEKG----------PVLIICPSSVIHNWESEFSRWASFFKVSVYHGANRDMILEKLNAGGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLVIKTKKRIGLTGTVMQNKMSELFNLFEWVAPGSLGTREHFREFYDEPLKQGQRATAPVRFVQIADKRKQHLVSVLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSEVQKRVYQRMLQLPEIQCLVNKDNPCACG--SPLKQSQCCRRIV---------PEGTIWSYLHRDNHDGCDSCPFCLVLPCLLKLQQISNHLELIKPNPKDEPEKQKKDAEFVSAVFGTDI-DLVGGVSASESFMDLSDVKHCGKMRALEKLMASWLSKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYTRQVYKQQLSNIAVA--GKMETRYFEGVQDCKEFQGELFGISNLFRDLSDKL 714
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: B9RVX1_RICCO (Uncharacterized protein n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RVX1_RICCO) HSP 1 Score: 434 bits (1116), Expect = 2.090e-128 Identity = 265/613 (43.23%), Postives = 367/613 (59.87%), Query Frame = 2
Query: 1229 INPSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELKRR--RRQGLPASTTGLPWLIVAPASVARVWMEHLETWGYF--STYHLESGKDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADR--RLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEE-CAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKFLMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSL 3046
+ SIN L +QREGVK+LY Y G VLGDDMGLGKT+Q+IA ++AV GK G D L+ R+QG P LIV P SV + W L W F S YH G + D + L AG +E+++TS+D R+H + L +++ V+ DE H LK+ S + +A LE+ ++ GLTGTI+QN + EL+ L + P S+G + F E + EP+K + ATA +R R+ D+R L A+ K M+RRTKEE + ++ GK D VVFC +SE+Q+ +Y R L +P+ Q L + PC CG R+ CC +I P +++ H E C CPFC L + KLQ+I+NH L++ N RD +K+R FA VF + +GG +++ F+ S V CGKM +LE L+ S+ DK+L+FS+S MLD+LE V KGY++ RLDG+TP RQ+ V +FNS VFLISTRAGG GLNL SA+RVV++D NWNPA + QAQDR++R GQK V VFRL++ G+ EE+ Y RQ+YK Q+++ A+ G+ +R F VQ SK +GELFGI NL + D L
Sbjct: 137 VPASINCRLLEHQREGVKFLYKLYRNNHGGVLGDDMGLGKTIQTIAFLAAVYGKDGESTDSTMLRDNQVRKQG--------PVLIVCPTSVIQNWEIELSRWATFNVSLYH---GANRDLIREKLDAGGVEILITSFDTYRIHGNILSEFKWEIVIVDEAHRLKNEKSKLYEACLEIKTQKRIGLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQ--RATAPERFVRVADERKGHLVAVLGKYMLRRTKEETIGHLMLGKEDNVVFCAMSELQKRVYKRMLQIPDIQCLINKDLPCSCG--SPLRQVECCKRIV---------PDGIIWPYLHRDNPEGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEFASAVFGPDI-DLVGGNAQTESFMGLSDVKHCGKMRALEKLMCSWASRGDKLLLFSYSVRMLDILEKFVIRKGYSFSRLDGSTPTNLRQSMVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAYDLQAQDRSFRFGQKRHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVS--GKMEKRYFEGVQDSKHFQGELFGIANLFRDLSDKL 721
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: A0A1S4DX38_CUCME (switch 2 isoform X2 n=9 Tax=Benincaseae TaxID=1003877 RepID=A0A1S4DX38_CUCME) HSP 1 Score: 432 bits (1110), Expect = 2.820e-128 Identity = 255/609 (41.87%), Postives = 358/609 (58.78%), Query Frame = 2
Query: 1229 INPSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELKRRRRQGLPASTTGLPWLIVAPASVARVWMEHLETWGYFST--YHLESGKDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEE-CAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKFLMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSL 3046
+ PSIN L +QREGVK+LY Y G G +LGDDMGLGKT+Q+IA ++AV K G KE +++ P LIV+P SV W W FS YH G + D + L AG +EV++TS+D R+H L ++++ ++ DE H LK+ S + A + + FGLTGTI+QN + EL+ L L+ P S+G + F E F EP+K + A R+ D+R + L A+ K M+RRTK+E + ++ GK D VVFC +SE+Q+ +Y R L LP+ Q L + PC CG +A CC + P +++ H E C CPFC L + KLQ+I+NH L++ + +D EK+R FA V+ + +GG +++ F+ S V CGKM +LE LL S+ DK+L+FS+S MLD+LE + KGY++ RLDG+TP RQ+ V +FNS VFLISTRAGG GLNL SA+RVV++D NWNPA + QAQDR++R GQK V VFRL++ G++EE+ Y RQ+YK Q+++ A+ G+ +R F VQ K +GELFGI NL D L
Sbjct: 132 VPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKD----------PVLIVSPTSVIHNWENEFSKWAKFSVAVYH---GTNRDLIYDKLEAGAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHRLKNEKSKLYSACAGIKTLKRFGLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEPLKHGQRSTAPERFIRIADERKQHLAAVLRKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQCLINKDLPCGCGSPLT--QAECCKRTV---------PNGIIWPYLHRDNPEGCDSCPFCIVLPCLVKLQQISNHLELIKPSPKDDPEKQRRDAEFASAVYGSDI-DLVGGSAQNESFMALSDVRHCGKMRALEKLLTSWTSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGSTPTNMRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAVS--GKMEKRYFEGVQDCKEFQGELFGICNLFSDLSDKL 712
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: A0A6J1D950_MOMCH (switch 2 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D950_MOMCH) HSP 1 Score: 434 bits (1116), Expect = 3.080e-128 Identity = 261/627 (41.63%), Postives = 360/627 (57.42%), Query Frame = 2
Query: 1190 GPLEAFDLCGGGFIN-----PSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEELKRRRRQGLPASTTGLPWLIVAPASVARVWMEHLETWGYFST--YHLESGKDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEE-CAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKFLMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSL 3046
GP E L G I PSIN L +QREGVK+LY Y G G +LGDDMGLGKT+Q+IA ++AV K G KE +++ P LIV P SV W W FS YH G + + + L AG +E+++TS+D R+H L I+++ ++ DE H LK+ + + A + + FGLTGTI+QN + EL+ L L+ P S+G + F E + EP+K + A R+ DKR + L A+ K M+RRTK+E + ++ GK D VVFC +SE+Q+ +Y R L LP+ Q L + PC CG +A CC + P +++ H E C CPFC L + KLQ+I+NH L++ N RD +K+R FA MVF +GG +++ F+ S V CGKM +LE L S+ DK+L+FS+S MLD+LE + KGY++ RLDG+TP RQ V +FNS VFLISTRAGG GLNL SA+RVV++D NWNPA + QAQDR++R GQK V VFRL++ G++EE+ Y RQ+YK Q+++ A+ G+ +R F VQ K +GELFGI NL D L
Sbjct: 113 GPFEPLILSSEGDIPLIQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKENYGKKKG----------PVLIVCPTSVIHNWENEFSKWANFSVAVYH---GANRESIYDKLEAGTMEILITSFDTYRIHGGILSEIKWEILIVDEAHRLKNEKAKLYSACAGIKTLKRFGLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPERFVRIADKRKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQCLINKDLPCSCGSPLT--QAECCKRTV---------PDGIIWPYLHRDNPEGCESCPFCIVLPCLVKLQQISNHLELIKPNPRDDPDKQRRDAEFASMVFGSDI-NLVGGSAQNESFMALSDVRHCGKMRALEKLFSSWATQGDKILLFSYSVRMLDILEKFLVRKGYSFSRLDGSTPTNLRQTLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAVS--GKMEKRYFEGVQDCKEFQGELFGICNLFSDLSDKL 711
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: A0A329RF68_9STRA (Switch 2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RF68_9STRA) HSP 1 Score: 440 bits (1132), Expect = 1.250e-127 Identity = 266/631 (42.16%), Postives = 369/631 (58.48%), Query Frame = 2
Query: 1238 SINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEE----LKRRRRQGLPASTTG-------------LPWLIVAPASVARVWMEHLETWGYFSTYHLESG-KDIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEECAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKF--LMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSLLKTLRAKY 3070
++N YL YQREGV++L + Y GA+LGDDMGLGKTVQ IA +SA++GK G RDK+ L +RR + + G P IV PAS+ + W + L TW ST L +D D ++ + G E+V+ SYD+L+M+ +RL +I ++AV+ DE H LK+ + ++QA + ++ GLTGT++QN+ KEL L I P ++G A F+ ++ + IK R +A + ++ KEL +RR KE + K+D VVFCDL+ +Q Y R LA+PEFQLL+R E CDCGR +R CC+K P D SGDG +L+ +FH G C CP C L V+ L K++NH LL+ N D E + +QR FA F E +GG+++ F + A TCGKM LE LL + + R + L+FS ST MLD+++ + +K Y RLDG T +ER V FNS VFLISTRAGG GLNL SA+ VV++D +WNPA++ QAQDRAYRIGQ V V+RLI+ GTIEE+ Y+RQIYK Q++ + +G R F VQG+ Q GELFGI NL+ + +LK ++ Y
Sbjct: 364 NLNSYLFDYQREGVEFLLSAYQRDTGAILGDDMGLGKTVQVIAFLSAIMGKHGDHRDKDAWRALLHQRRERYSESGAVGHPEDSGFSFSGEVAPIFIVMPASLLQNWEQELLTWMSCSTIILRGKPRDRDAMIDQIARGEYEIVICSYDILKMYLNRLHKIPWEAVILDEMHCLKNPEAKLTQAVKVIKCRKKLGLTGTLMQNNEKELHCLVDTIAPGAIGSWAEFSMYYGQDIKFGRKKSAAPEAVKRSQQKEKELRLKLRPYYLRREKEINPTFQEVKKNDQVVFCDLTPLQMAAYQRVLAMPEFQLLQRGEERCDCGRDSGEKRKKCCYKTPSD-SGDGP---GLLYERFHEHGP-CKNCPNCMGLPCVAMLLKLSNHLELLKVNPHDGQELQHYQRKFARTAFGSDLDE-VGGVNQVSSFQEMCAISTKTCGKMIVLEKLLAVWKKRRQRTLIFSRSTRMLDIIQLFLITKATKYSRLDGNTKVEERLQMVNGFNSSESNTTVFLISTRAGGVGLNLQSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTL--KGSNAPRYFEGVQGNPQQRGELFGIANLICWKPGGVLKGIQDAY 986
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: A0A0P1B1F0_PLAHL (Dna repair and recombination protein rad26 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1F0_PLAHL) HSP 1 Score: 438 bits (1126), Expect = 2.620e-127 Identity = 268/643 (41.68%), Postives = 377/643 (58.63%), Query Frame = 2
Query: 1205 FDLCGGGFINPSINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEE-----LKRRRR------------QGLPASTTGLPWLIVAPASVARVWMEHLETWGYFSTYHLESGKDIDD--LMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEECAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKF--LMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSLLKTLRAKY 3070
F++C S+N YL YQR+GV++L+ Y GA+LGDDMGLGKT+Q IA +SA++GK G RDKE L+RR+R G S P IV PAS+ + W + L TW +T L GK ID ++ + G E+V+ SYD+L+ H RL +I ++ V+ DE H LK+ S +++A + ++ GLTGT++QN+ KEL L I P ++G A F+ ++ + IK R +A + ++ EL S +RR K + + K D VVFCDL+++Q Y R LA+PEFQLL+R +E CDC R +R SCC+K P D G P +L+ +FH G C CP C L V+ L K++NH LL+ N D E + +Q FA+ F +E +GG+++ F + + TCGKM LE LL + + R+K L+FS ST MLD+++ + +K Y RLDG T +ER V EFNSD VFLISTRAGG GLNL SA+ VV++D +WNPA++ QAQDRAYRIGQ V V+RLI+ GTIEE+ Y+RQIYK Q++ + + +G R F VQG+ Q+GELFGI NL+ + +LK ++ Y
Sbjct: 344 FEVCA------SLNSYLLDYQRQGVEFLFKAYNCNTGAILGDDMGLGKTIQIIAFLSAIMGKQGDYRDKETWQKILLQRRKRFSDSGAVGHPEDSGFCFSDEISPIFIVMPASLLQNWEQELHTWMSCTTVILR-GKPIDRDAIIDQIARGEFEIVICSYDILKTHSSRLNKISWEVVILDEMHCLKNPESKLTKAVKGIRCRKKLGLTGTLMQNNEKELHCLVDTIAPGAIGTWAEFSLYYGQDIKYGRKKSAAPEAVKRSRQKEIELRRKLSPYYLRREKGINPTFQVVKKCDQVVFCDLTQMQMAAYQRVLAMPEFQLLQRGDERCDCNRDSMEKRKSCCYKTPADL---GERP-GLLYERFHEQGP-CKNCPNCMGLPCVAMLLKLSNHLELLKVNPHDGPEVQHYQEEFAKTAFGSDLEE-VGGVNQVSNFKEMCSISTKTCGKMIVLEKLLAVWKKRREKTLIFSRSTRMLDIIQLFLITKATRYSRLDGNTKVEERLKMVNEFNSDDSHTAVFLISTRAGGVGLNLQSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDSTL--KGFNAPRYFEGVQGNPQQQGELFGIANLICWKPGGVLKGIQDAY 971
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Match: D0NZ28_PHYIT (DNA repair and recombination protein RAD26 n=18 Tax=Phytophthora TaxID=4783 RepID=D0NZ28_PHYIT) HSP 1 Score: 435 bits (1119), Expect = 4.890e-127 Identity = 262/632 (41.46%), Postives = 365/632 (57.75%), Query Frame = 2
Query: 1238 SINRYLKGYQREGVKWLYTKYVAGEGAVLGDDMGLGKTVQSIALVSAVLGKTGTVRDKEE----LKRRRRQGLPASTTG-------------LPWLIVAPASVARVWMEHLETWGYFSTYHLESGK--DIDDLMASLGAGRLEVVVTSYDLLRMHKDRLKRIRFDAVLFDEYHTLKSSSSMVSQAALELDRKRVFGLTGTIIQNDMKELWFLTHLIDPTSVGEQARFAEHFSEPIKRARAMNATAADRRLGDKRLKELNALRSKNMIRRTKEEVLSDVLKGKSDTVVFCDLSEVQRDLYLRTLALPEFQLLKRANEPCDCGRKGAPRRASCCHKIPFDESGDGIDPRAVLFRKFHPTGEECAKCPFCCQLAAVSKLQKIANHPCLLQENSRDSMEKRRHQRMFAEMVFTEKTKEAMGGLDRSQKF--LMASRVGTCGKMASLEVLLDSFYRSRDKVLVFSWSTAMLDVLESLVTSKGYNYRRLDGATPPKERQARVKEFNSDRHGVFVFLISTRAGGQGLNLHSASRVVLYDVNWNPANEAQAQDRAYRIGQKNKVAVFRLISKGTIEEVCYMRQIYKLQITSAAMGDQGRGGRRQFTAVQGSKGQEGELFGIQNLLKFSDDSLLKTLRAKY 3070
++N YL YQREGV++L + Y GA+LGDDMGLGKT+Q IA +SA++GK G RDK+ L RR + + G P IV PAS+ + W + L TW +T L GK D D ++ + G E+V+ SYD+L+M+ RL +I ++AV+ DE H LK+ + +++A + ++ GLTGT++QN+ KEL L I P ++G A F+ ++ + IK R +A + ++ KEL +RR KE + K+D VVFCDL+ +Q Y R LA+PEFQLL+R E CDCGR +R CC+K P D D +L+ +FH G C CP C L V+ L K++NH LL+ N D E + +Q FA F E +GG+D+ F + A TCGKM LE LL + + R + L+FS ST MLD+++ + +K Y RLDG T +ER V +FNS VFLISTRAGG GLNL SA+ VV++D +WNPA++ QAQDRAYRIGQ V V+RLI+ GTIEE+ Y+RQIYK Q++ + +G R F VQG+ Q GELFGI NL+ + +LK ++ Y
Sbjct: 239 NLNSYLFDYQREGVEFLLSAYQRDTGAILGDDMGLGKTIQVIAFLSAIMGKHGDRRDKDAWRALLHTRRERYSESGAVGHPEDSGFSFAGEVAPIFIVMPASLLQNWEQELHTWMSCTTIILR-GKPSDRDAMIDQIARGEYEIVICSYDILKMYLSRLHKIPWEAVILDEMHCLKNPEAKLTKAVKAITCRKKLGLTGTLMQNNEKELHCLVDTIAPGAIGSWAEFSMYYGQDIKYGRKKSAAPEAVKRSQQKEKELRQKLHPYYLRREKEINPTFQEVKKNDQVVFCDLTPLQMAAYQRVLAMPEFQLLQRGEERCDCGRDSGEKRKKCCYKTPSDIG----DAPGLLYERFHEDGP-CKNCPNCMGLPCVAMLLKLSNHLELLKVNPHDGQELQHYQSEFASTAFGSDLDE-VGGVDQVSSFQEMCAISTKTCGKMIVLEKLLSVWKKRRQRTLIFSRSTRMLDIIQLFLITKATKYSRLDGNTKVEERLQMVNDFNSSESNTTVFLISTRAGGVGLNLQSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTL--KGSNAPRYFEGVQGNPQQRGELFGIANLICWKPGGVLKGIQDAY 861 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1074.714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1074.714.1 >prot_F-serratus_M_contig1074.714.1 ID=prot_F-serratus_M_contig1074.714.1|Name=mRNA_F-serratus_M_contig1074.714.1|organism=Fucus serratus male|type=polypeptide|length=1239bp MGARGMDGHRSSSQAMRNGGSGFDMEAFDTEAVATISAPNYGTTVRCDEDback to top mRNA from alignment at F-serratus_M_contig1074:101476..127619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1074.714.1 ID=mRNA_F-serratus_M_contig1074.714.1|Name=mRNA_F-serratus_M_contig1074.714.1|organism=Fucus serratus male|type=mRNA|length=26144bp|location=Sequence derived from alignment at F-serratus_M_contig1074:101476..127619+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1074:101476..127619+ >mRNA_F-serratus_M_contig1074.714.1 ID=mRNA_F-serratus_M_contig1074.714.1|Name=mRNA_F-serratus_M_contig1074.714.1|organism=Fucus serratus male|type=CDS|length=7434bp|location=Sequence derived from alignment at F-serratus_M_contig1074:101476..127619+ (Fucus serratus male)back to top |