mRNA_F-serratus_M_contig1074.712.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: D7FX85_ECTSI (Excinuclease ABC subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX85_ECTSI) HSP 1 Score: 803 bits (2073), Expect = 1.450e-279 Identity = 459/748 (61.36%), Postives = 526/748 (70.32%), Query Frame = 1
Query: 1 RIDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVF-RGKAWRKK*SEE--LKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEE-GLSRGEVLQACLERYWGDAL-EASTSRGVTMESK------RPSSSSPGFLNKKG--MLVADLPDEIVTADELPEGGAALLEELLSEARKETV-----ATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRP---VMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSSHPGA----VPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGIS---DAPPPSQPP-----------------------------------EAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDMFLP 2055
RIDYIVTASGAEALLLEAS+I+ HQPPFNVLLKDDK+NYPYVCVTWSEPYPR+LITRD+PRRGGG EDRYYGPFVD GQVK+TVAL+RRVLPLRER RPLYKDKPCLNYD+G+CPG CQGL+SE++YAETVRLAEMVFRGEG +LLS L+ RM+S S AE FERA EIK+Q+ LV+GGLLGS+LHFS+ G AAGG G G+ RG R +E +RDVVAVG AG LACFQVFQVRG RL GRLGFTYRVEE GLSRGEVLQACLERYWGD L A T+ G + + R + +PG +G V +P+EIVTAD LP+GGA LL ELLS ARK A AT + + + T+E+A + A VDK+ P V VV+G G GERHHLCVM KNAELEA RLL+G E+ GL+QL RMLGL S P RIEGYDVSHTGGG AVAS VCF+DGK S KDHR+YR+RSPG+RKGHSDDYASLREVIARRF+PP+P RS P + VP+LVL+DGGKGQL AALEGAA+A DAW SV+ G + + D VG + D P PP + EDPD VL +AA P E + +V VGGGRRVTFVSLAKK+EEV+VP SS+PL AA+EAGP+SPGVM+LRQVRDEAHRFAVAYHRKLRG DMFLP
Sbjct: 91 RIDYIVTASGAEALLLEASLIRQHQPPFNVLLKDDKQNYPYVCVTWSEPYPRVLITRDKPRRGGGSEDRYYGPFVDAGQVKSTVALVRRVLPLRERARPLYKDKPCLNYDMGICPGPCQGLVSEEDYAETVRLAEMVFRGEGSQLLSTLQGRMESESRAERFERAGEIKAQMTLVRGGLLGSSLHFSAGGVAAGGGGDRGGLQPRGDGARASSAEGGGSRRDVVAVGLAGDLACFQVFQVRGGRLIGRLGFTYRVEEEGLSRGEVLQACLERYWGDVLMSARTAAGGVGDERGDNLPSRTLNGNPGAKGGRGGGFSVLHVPEEIVTADALPDGGAVLLAELLSGARKAAADAQRGAQATGPGEGGSPRDL--------TTEKATTGKTARSKRSVDKSYPPAVAVRVVHGESGAGERHHLCVMALKNAELEAKRLLRGGESIARGLSQLARMLGLGSNPARIEGYDVSHTGGGNAVASLVCFLDGKASPKDHRRYRIRSPGIRKGHSDDYASLREVIARRFSPPTPSLRSPRPPSQANPVPELVLIDGGKGQLAAALEGAAIAADAWLSVERGGT----------TTLTGFDTEPAVGAAAAVDTKSPGAPPVESRELAGTPLLDDAVRRDEASWSALPPLLGERTAQEEDPDAVLSTAAVPPPEPSDGDVAGARSVGVGGGRRVTFVSLAKKEEEVYVPGSSEPLAAALEAGPSSPGVMVLRQVRDEAHRFAVAYHRKLRGNDMFLP 820
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: A0A1Z3HQZ6_9CYAN (UvrABC system protein C n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HQZ6_9CYAN) HSP 1 Score: 345 bits (884), Expect = 5.580e-105 Identity = 244/684 (35.67%), Postives = 327/684 (47.81%), Query Frame = 1
Query: 4 IDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRF---APPSPQARSSHPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDM 2046
I++IVT + AEAL LEA+++K HQP FNVLLKDDK+ YPY+C+TWSE YPRL ITR R RRG G +DRYYGP+VD G ++ T+AL++R+ PLR+R +PL+KD+PCLNYDIG CPG CQ LI+ EY TV+ MVF+G EL+S L +M+SA+ +FE+A ++ QI RGL K + + RD +A+ H AC Q+FQVR RL GRLGF + G G++LQ LE ++ + + ++P I+ +LP+G +L LS+ R V P+ S +S V+ MV +NA+ E R + A+ + L L ML L +P RIEGYD+SH G AVAS V F DG + + +R Y++++P VR GHSDD+ASL EV+ RRF A + R +P PDLV++DGGKGQL A +E VL L D + VSLAKK EE+F P S PL + PN PGV LLR++RDEAHRFAV++HR+ R M
Sbjct: 77 IEFIVTDTEAEALALEANLVKQHQPHFNVLLKDDKK-YPYLCITWSEAYPRLFITRKR-RRGKG-QDRYYGPYVDVGLLRRTLALVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQQLITSQEYHRTVQRVAMVFQGRTQELVSMLTQQMESAAAELKFEQAARLRDQI-----------------------RGLERLCADQKVALP--DDTVSRDAIALAADAHHACVQIFQVRAGRLVGRLGFVADIHSG-GPGDILQRVLESHY-----------------------------QSVDAVEIPAVILCQHDLPDGE--ILGNYLSQRRGRKVTLEV--------------------------PQRQSKASLVE-----------------------MVERNAQYELARTQRFADRNAQALLDLAEMLDLPDLPRRIEGYDISHVQGADAVASQVVFTDGMAAKQHYRHYKIKNPEVRAGHSDDFASLAEVMGRRFRRYAADPQKPRLGNPDW-PDLVMIDGGKGQLSAVVE----------------------------------------------------------VLRQMNLLSD--------------------LRVVSLAKKREEIFTPGVSTPL----DTDPNQPGVQLLRRLRDEAHRFAVSFHRQQRSDRM 568
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: K9TG78_9CYAN (UvrABC system protein C n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9TG78_9CYAN) HSP 1 Score: 340 bits (871), Expect = 4.390e-103 Identity = 234/685 (34.16%), Postives = 325/685 (47.45%), Query Frame = 1
Query: 4 IDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSS----HPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDM 2046
I++IVT + AEAL LEA+++K HQP FNVLLKDDK+ YPY+C+TWSE YPR+ ITR R + +DRYYGP+VD G +++T+ L++++ PLR+R +PL+KD+PCLNYDIG CPG CQGLI ++Y +TV+ MVF+G ELL L+ +M+ A++ FE A ++ +I +Q G + D L +D +A+ G AC Q+FQVR +L GRLGF + G +LQ LE ++ + + ++P EI+ ELPE A +L + LS+ + V+ T R KA L MVAKNA+ E R+ K ++ + L +L L +P RIEGYD+SH G AVAS V F+DG + + +R+Y++R+P V+ GHSDD+ASL EV+ RRF Q R + H PDLV++DGGKGQL A +E VL L D V VSLAK+ EE+F P S P+P+ P PGV LLR++RDEAHRFAV +HR+ R + M
Sbjct: 76 IEFIVTDTEAEALALEANLVKQHQPYFNVLLKDDKK-YPYLCITWSETYPRIFITRKR--KAASAKDRYYGPYVDAGVLRSTLHLVKQIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQGLIDSEDYRKTVQKVAMVFQGRTEELLDILKQQMEVAAEELNFELAARLRDRIQGLQSLHAGQKVSLPDD-------------------------RLSQDAIALSSNGDRACIQLFQVRAGQLVGRLGFVAEAQTA-EPGAILQRVLEEHY-----------------------------RNVDSVEIPAEILVQHELPE--AEILGDWLSDRKGRKVSILT--------------------------------PQRQTKA-----------------ELIEMVAKNADYEMARMQKFSDRNAAAMQDLAELLDLPELPRRIEGYDISHVQGSDAVASRVVFIDGLPANQHYRRYKIRNPEVQSGHSDDFASLAEVLGRRFRDAGNQKRETGKIEHTPDWPDLVMIDGGKGQLSAVVE----------------------------------------------------------VLREMDLLED--------------------VRVVSLAKQREEIFQPGESLPVPS----DPEQPGVQLLRRLRDEAHRFAVTFHRQQRTERM 569
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: A0A8J7E1F3_9CYAN (UvrABC system protein C n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7E1F3_9CYAN) HSP 1 Score: 335 bits (859), Expect = 2.650e-101 Identity = 239/682 (35.04%), Postives = 328/682 (48.09%), Query Frame = 1
Query: 1 RIDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWG--DALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSSHPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGK 2040
I++IVT S AEAL LEA++IK HQP FNVLLKDDK+ YPYVCVTWSE YPR+ ITR R R G +DRYYGP+VD +++T+ L++R+ PLR+R +PL+K++PCLNYD+G CPG CQGLI+ +EY +TV+ MVF+G GEL+ L +M+ A++A FE+A I+ ++ +Q +LH + A + + RD +A+ C Q+FQVR +L GRL F + G + G +LQ LE ++ D++E +P EI+ ELPE A +L E LSE R V + R KA L MV +NA E R + + + L L ++L L +P RIEGYD+SH G AVAS V F+DG + + +R Y+++ P V+ GHSDD+AS+ EVI RRF + G PDLV++DGGKGQL A + AV + S P+ ++L + VSLAK+ EE+F+P S PLP E PGV LLR+VRDEAHRFAV++HR+ R K
Sbjct: 76 EIEFIVTDSEAEALALEANLIKQHQPYFNVLLKDDKK-YPYVCVTWSEDYPRIFITRKR--RKGKEKDRYYGPYVDTHLLRSTLHLVKRIFPLRQRPKPLFKERPCLNYDLGRCPGVCQGLITPEEYRKTVQKVAMVFQGRTGELIEILNKQMECAAEALNFEQAALIRDRVRGLQ------SLHANQKVALP-------------------DDTVSRDAIALAADDKYCCIQLFQVRAGKLVGRLVFFAETQSG-TFGAILQRVLEEHFARVDSVE-------------------------------IPSEILVQYELPE--AEILVEWLSERRGRKV--------------------------------HLLAPQRQSKA-----------------ELIEMVERNARYELERTQRSRDRNTQALQDLAQILDLPELPHRIEGYDISHIQGSNAVASQVVFIDGVPAKQHYRHYKIQDPTVKIGHSDDFASMAEVIRRRFRKYLQNPSEARTGNFPDLVMIDGGKGQLSAVV---AVLQENVES-----------------------------------------------------PILEDL-------------------SLVSLAKQREEIFLPGESNPLPTDSE----QPGVQLLRRVRDEAHRFAVSFHRQQRLK 567
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: UPI0019EA5B4D (Excinuclease ABC subunit UvrC n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI0019EA5B4D) HSP 1 Score: 335 bits (859), Expect = 3.030e-101 Identity = 245/688 (35.61%), Postives = 325/688 (47.24%), Query Frame = 1
Query: 1 RIDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTE-GVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWG--DALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRF---APPSPQARSSHPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDM 2046
I+ IVT + AEAL LEA++IK HQP FNVLLKDDK+ YPY+C+TWS+ YPR+ ITR R R G +DRYYGP+VD GQ++ T+ L++R+ PLR+R +PL+KD+PCLNYDIG CPG CQ LIS ++Y + VR M+F+G EL L +M+ A++ FE A ++ QI RGL GV + A + + RD +A+ H AC Q+FQ+R RL GRLGF G + GE+LQ LE ++ DA+E +P +++T ELP+ A +L E LSE R V+ V R KA L MV +NA E R + AE + + L +L L +P RIEGYD+SH G AVAS V F+DG + + +R Y++++P VR GHSDD+AS+ EVI RRF A R +P PDLV++DGGKGQL A +E VL L D V VSLAK+ EE+F+P S PL E PGV LLR++RDEAHRFAV++HR+ R M
Sbjct: 76 EIEIIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCITWSDAYPRIFITRRR--RSGEAKDRYYGPYVDVGQLRRTLGLVKRLFPLRQRPQPLFKDRPCLNYDIGRCPGVCQKLISSEDYHKIVRRVAMIFQGRTQELTEILTQQMEKAAEELNFELAAHLRDQI-----------------------RGLDNLGVDQKVALP---DDTVSRDAIALMADEHHACIQLFQIRAGRLVGRLGFVADATTG-TPGEILQRVLEEHYATVDAVE-------------------------------IPSDVLTQHELPD--AEILTEFLSERRGRKVSIY--------------------------------VPQRQSKA-----------------DLIEMVERNAGYELARTQRFAERNHQAMLDLAEVLDLPDLPHRIEGYDISHIQGSDAVASQVVFLDGLPAKQHYRHYKIKNPTVRSGHSDDFASMAEVIQRRFRRYAQDPTTQRVGNPD-FPDLVMIDGGKGQLSAVVE----------------------------------------------------------VLREMNLLED--------------------VKVVSLAKQREEIFLPGESLPLDTEAE----QPGVQLLRRLRDEAHRFAVSFHRQQRSTRM 568
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: A0A0M1JMA2_9CYAN (UvrABC system protein C n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JMA2_9CYAN) HSP 1 Score: 335 bits (860), Expect = 3.220e-101 Identity = 236/690 (34.20%), Postives = 337/690 (48.84%), Query Frame = 1
Query: 4 IDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVE-------EGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSSH--PGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDM 2046
I++IVT + AEAL LEA++IK HQP FNVLLKDDK+ YP++C+TWSEPYPR+ ITR R + P+DRYYGP+VD Q++ T+ L++R+ PLR+R +PL+KD+PCLNYDIG CPG CQGLI+ ++Y +TV+ MVF+G ELL L M+ A+++ FE+A I+ QI A+ G G+ + V + + RD VA+ G C Q+FQ+R +L GRLGF R+ +G+ +G Q+ R +GD L+ + E + + + ++P EI+ EL + L LS+ + V+ T P+ S + ++ MV +NA E +R+ K ++ + L L +L LA +P RIEGYD+SH G AVAS V F+DG + + +R Y++++P V GH+DD+AS+ EVI RRF S+H P +PDLV++DGGKGQL A ++ +LS D+G + VSLAKK EE+F+P S PL E PGV LLR+VRDEAHRFAV++HR+ R M
Sbjct: 82 IEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKK-YPFLCITWSEPYPRVFITRKRQK--SNPQDRYYGPYVDSQQLRNTLKLVKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQGLITPEDYHKTVQKVAMVFQGRTAELLETLTSYMEQAAESLNFEQAAIIRDQI------------------ASLKGLGIQQKVALP-------DDRISRDAVALATDGQNTCIQLFQIRAGQLVGRLGFVVRLSPVEPPQPDGVQKGR--QSDESREFGDVLQR-----ILEE------------HYQQVDAVEIPSEILVQYELKDED--FLASWLSDRKGRKVSILT--------------------------PQRQSKAELIE-----------------------MVERNAYHELSRMQKVSDRNMQALQDLAEILDLADLPHRIEGYDISHIQGSDAVASRVVFIDGLPAKQHYRHYQIKNPAVHAGHADDFASMAEVIQRRFRHGKAGKNSAHSIPEDLPDLVMIDGGKGQLSAVVK-----------------------------------------------------------VLS-------------------DLGLMADLRVVSLAKKREEIFLPGESLPLKTDSE----QPGVQLLRRVRDEAHRFAVSFHRQKRTNRM 591
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: UPI001A07F103 (Excinuclease ABC subunit UvrC n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI001A07F103) HSP 1 Score: 334 bits (857), Expect = 7.360e-101 Identity = 238/686 (34.69%), Postives = 329/686 (47.96%), Query Frame = 1
Query: 4 IDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVFRGKAWRKK*--SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRF---APPSPQARSSHPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDM 2046
I++IVT + AEAL LEA++IK HQP FNVLLKDDK+ YPY+C+TWSE YPR+ +TR R R G +DRYYGP+VD G ++ T+++ +R+ PLR+R +PL+KD+PCLNYDIG CPG CQ LIS ++Y +TV+ MVF+G EL+ L +M+ A++ FE+A +++ Q+ +G+ R A +K + + RD +A+ AC Q+FQ+R RL GRLGF + G + GE+LQ LE ++ ++P EI+ ELP+ A +L E L++ R VA ++P + K E L MV +NA+ E R+ K A+ + L L L L +P RIEGYD+SH G AVAS V FVDG + + +R Y++++P VR GHSDD+AS+ EVI RRF A + R +P PDLV++DGGKGQL A +E VL L D + VSLAKK EE+F+P S PL E PGV LLR++RDEAHRFA+++HRK R M
Sbjct: 76 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCITWSEDYPRIFVTRKR--RKGNSKDRYYGPYVDTGLLRRTLSIAKRIFPLRQRPQPLFKDRPCLNYDIGRCPGVCQQLISPEDYHKTVQRVAMVFQGRTTELVDVLARQMEKAAEELRFEQAAQLRDQL---------------------------QGLERLTAHQKVALPDDTVSRDAIALASDDQFACIQLFQIRAGRLVGRLGFNADAQAG-TPGEILQRVLEEHYSMVEPI-----------------------------EIPAEILVQYELPD--ADMLAEYLTDRRGRKVAI----DMPQRQTKAE---------------------------------------------LVEMVERNAQYELARMQKVADRNLQALQDLAEALDLPDLPKRIEGYDISHIQGSDAVASQVVFVDGMPAKQHYRHYKIKNPDVRSGHSDDFASMAEVIRRRFRRYAADPEKLRVGNPDW-PDLVMIDGGKGQLSAVVE----------------------------------------------------------VLRELNLLQD--------------------LNVVSLAKKREEIFLPGESLPLNTEAE----QPGVQLLRRLRDEAHRFAISFHRKKRTDRM 567
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: UVRC_THEVB (UvrABC system protein C n=8 Tax=Cyanobacteria TaxID=1117 RepID=UVRC_THEVB) HSP 1 Score: 333 bits (853), Expect = 1.900e-100 Identity = 236/687 (34.35%), Postives = 323/687 (47.02%), Query Frame = 1
Query: 1 RIDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGP------EDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTE-GVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSSHPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGK 2040
I++IVT + AEAL LEA++IK HQP FNVLLKDDK+ YPYVC+TWSEPYPR+ ITR R GG +DRYYGP+VD +++ T+AL++R+ PLR+R RPL++D+PCLNYDIG CPG CQGLIS EY +T++ M+F+G GEL+++L+ +M A+ FE A ++ QI RGL GV + + + + RD +A+ A Q+FQ+R RL GRL F + G S G +LQ LE ++ + ++P EI+ LPE L LSE + V +V R KA L M RL + ++ L L ++LGL ++P RIEGYD+SH G AVAS V F+DG + + +R Y +R+P V+ GHSDD+ASL E++ RRFAP + + P PD++L+DGGKGQL A ++ VL PL +EL T VSLAK+ E++F+P QPLPA P PGV LLR+VRDEAHRFA+ +HR+ R +
Sbjct: 71 EIEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYVCITWSEPYPRIFITRKRQFGNGGDPRSDSAKDRYYGPYVDSFRLRQTLALVKRLFPLRQRPRPLFRDRPCLNYDIGRCPGVCQGLISPQEYRQTLQRVAMIFQGRTGELVAQLQAQMAQAAADLNFELAARLRDQI-----------------------RGLEHLGVDQKVSLP---DDTVSRDAIALAVGDRHAAIQLFQIRAGRLVGRLAFVADAQSG-SAGTILQRVLEEHYAQVEDV-----------------------------EIPSEILLQHPLPEPD--FLRTYLSEKKGRAVTL--------------------------------TVPQRQAKA-----------------ELIAMXXXXXXXXXARLQQASDRTQTALEDLAQLLGLDTLPHRIEGYDISHIQGSDAVASRVVFIDGLPAQQHYRHYNIRNPEVKLGHSDDFASLAEILRRRFAPYL-EGQGETPDDWPDIILIDGGKGQLSAVVQ----------------------------------------------------------VL---EPLLEEL-------------------TLVSLAKQREDIFLPHQRQPLPA----DPEQPGVQLLRRVRDEAHRFALNFHRQKRAQ 564
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: A0A7C3VM84_9CYAN (UvrABC system protein C n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3VM84_9CYAN) HSP 1 Score: 332 bits (850), Expect = 5.090e-100 Identity = 240/687 (34.93%), Postives = 321/687 (46.72%), Query Frame = 1
Query: 4 IDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGLTEGVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSSHPGAV------PDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLRGKDM 2046
I++IVT + AEAL LEA++IK H P FNVLLKDDK+ YP++C+TWSE YPR+ ITR R R +DRYYGP+VD GQ++ T L++R+ PLR+R +PLYKD+PCLNYDIG CPG CQ LIS ++Y +TV+ MVF+G EL++ L +M++A+++ +FE A I+ QI +Q + D + RD++A+ AC Q+FQ+R +L GRLGF E GE+LQ LE + A ++P EI+ ELP+G +L LS+ ++ V T R KA L MVAKNA E RL K ++ L L +L L +P R+EGYD+SH G AVAS V FVDG + + +R+Y++R P V GHSDD+ASL EVI RRF + R S G + PDLV++DGGKGQL A +E VL L D V VSLAK+ EE+F+P S PL E PGV LLR++RDEAHRFAV++HR+ R + M
Sbjct: 77 IEFIVTDTEAEALALEANLIKQHDPHFNVLLKDDKK-YPFLCITWSEEYPRIFITRKRQMRHA--KDRYYGPYVDAGQLRNTWQLVKRIFPLRQRPQPLYKDRPCLNYDIGRCPGVCQNLISPEDYRQTVQKVAMVFQGRTTELVATLTKQMETAAESLQFELAARIRDQIAGLQSLTASQKVSLPDD-------------------------TISRDIIALAAGKDSACIQLFQMRAGQLVGRLGFVSGAGE---LGEILQRVLEECYQTAEPV-----------------------------EIPTEILVQHELPDGD--ILAAWLSQRKERKVTIIT--------------------------------PQRQTKA-----------------ELIEMVAKNAGYELERLEKQQDSNYAALQDLAELLDLPELPHRMEGYDISHIQGSDAVASQVVFVDGIPAKQHYRRYKIRHPEVTSGHSDDFASLAEVIGRRFRDIAKIKRES--GQIIPSQDMPDLVMIDGGKGQLSAVVE----------------------------------------------------------VLRELELLSD--------------------VRVVSLAKQREEIFLPGESLPLATDAE----QPGVQLLRRLRDEAHRFAVSFHRQQRTERM 568
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Match: A0A8K1ZZM8_9CYAN (Excinuclease ABC subunit UvrC n=2 Tax=Petrachloros TaxID=2918834 RepID=A0A8K1ZZM8_9CYAN) HSP 1 Score: 332 bits (850), Expect = 5.090e-100 Identity = 236/679 (34.76%), Postives = 324/679 (47.72%), Query Frame = 1
Query: 1 RIDYIVTASGAEALLLEASMIKHHQPPFNVLLKDDKRNYPYVCVTWSEPYPRLLITRDRPRRGGGPEDRYYGPFVDQGQVKATVALIRRVLPLRERQRPLYKDKPCLNYDIGLCPGACQGLISEDEYAETVRLAEMVFRGEGGELLSRLRDRMQSASDAEEFERADEIKSQIVLVQGGLLGSALHFSSDGAAAGGRGL-TEGVFRGKAWRKK*SEELKRDVVAVGQAGHLACFQVFQVRGSRLTGRLGFTYRVEEGLSRGEVLQACLERYWGDALEASTSRGVTMESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARKETVATATESNVPSTKKKIEDCEQPAETSEEARPPRNASVSSRVDKAPRPVMVVYGGEGTGERHHLCVMVAKNAELEATRLLKGAEAAGEGLAQLVRMLGLASVPGRIEGYDVSHTGGGQAVASAVCFVDGKVSLKDHRKYRVRSPGVRKGHSDDYASLREVIARRFAPPSPQARSSHPGAVPDLVLVDGGKGQLHAALEGAAVATDAWRSVDGDGDGGDECRKALPSLINATDGNTIVGISDAPPPSQPPEAEDPDDVLLSAAPLPDELPNFRAGAGSTVDVGGGRRVTFVSLAKKDEEVFVPWSSQPLPAAVEAGPNSPGVMLLRQVRDEAHRFAVAYHRKLR 2034
I++IVT + AEAL LEA++IK HQP FNVLLKDDK+ YPY+C+TWS+ YPR+ ITR R R+ +D++YGP+VD + T+ L++R+ PLR+R +PL+KD+PCLNYDIG CPG CQ LIS ++Y +T++ M+F+G GEL+ L +M+ A+ FE A ++ QI RGL T G + A + + RD +A+ + AC Q+FQ+R RL GRLGF + G S G +LQ LE ++ A ++P EI+ ELPE A +L E LS + VA + R KA L MVA+NA+ E R K + LA L +L L P RIEGYD+SH G AVAS V F+DG + + +R+Y++R+P VR GHSDD+ASL EVI RRF + + P PDLV++DGGKGQL A + AA+ T +N L+S V +SLAK+ EEVF+P + PL P+ P V LLR++RDEAHRFA+++HR+ R
Sbjct: 76 EIEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKK-YPYLCITWSDTYPRIFITRKRRRQEQ--KDKFYGPYVDSRTLGQTLRLVKRLFPLRQRPKPLFKDRPCLNYDIGRCPGVCQQLISPEDYRKTLQKVAMIFQGRTGELIDTLTAQMEQAATDLNFEYAARLRDQI-----------------------RGLQTLGADQKVALP---DDTVSRDAIALAKNAQYACVQLFQIRAGRLVGRLGFVADAQAG-SEGAILQRVLEEHYASADPV-----------------------------EVPTEILVQTELPE--AEILAEYLSRYKGRKVALL--------------------------------MPQRQSKA-----------------DLIEMVARNAQYELERTQKSCDRNTAALADLAALLDLPETPRRIEGYDISHVQGSDAVASRVVFIDGLPAKQYYRRYKIRNPEVRPGHSDDFASLTEVIQRRFRCYADSTATPEPEDWPDLVMIDGGKGQLSAVV--AAIET-----------------------LN----------------------------LVSP-------------------------VVVISLAKQREEVFLPGAKLPL----VTNPDQPSVQLLRRLRDEAHRFAISFHRQQR 562 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1074.712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1074.712.1 >prot_F-serratus_M_contig1074.712.1 ID=prot_F-serratus_M_contig1074.712.1|Name=mRNA_F-serratus_M_contig1074.712.1|organism=Fucus serratus male|type=polypeptide|length=424bp MESKRPSSSSPGFLNKKGMLVADLPDEIVTADELPEGGAALLEELLSEARback to top mRNA from alignment at F-serratus_M_contig1074:78771..82425- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1074.712.1 ID=mRNA_F-serratus_M_contig1074.712.1|Name=mRNA_F-serratus_M_contig1074.712.1|organism=Fucus serratus male|type=mRNA|length=3655bp|location=Sequence derived from alignment at F-serratus_M_contig1074:78771..82425- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1074:78771..82425- >mRNA_F-serratus_M_contig1074.712.1 ID=mRNA_F-serratus_M_contig1074.712.1|Name=mRNA_F-serratus_M_contig1074.712.1|organism=Fucus serratus male|type=CDS|length=2544bp|location=Sequence derived from alignment at F-serratus_M_contig1074:78771..82425- (Fucus serratus male)back to top |