mRNA_F-serratus_M_contig107.664.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig107.664.1
Unique NamemRNA_F-serratus_M_contig107.664.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.870e-44
Identity = 128/342 (37.43%), Postives = 167/342 (48.83%), Query Frame = 1
Query:    4 CSKLF-PSRGGRKSAGMFTCLVPSGCVWAERTLLTRESPMDVVDIIAELVVPPNLLIYNAACQTVRAFEQRCPGLL-DNGGKLPRLPVEAGSTAVGRVVLPHLAHLGNHSGTASQMTPRASSVNTPNRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGGAGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQRHGVQGQGVPGSGGAEGGAGVPTAGETVVHHEAAKFLRVLLFCLVGDK-AGNAPSFPTWLADGATFEGVLVEGLRRYAKDKEDFWVNGLQPGGAGERTRAARAVRSGIGLGRGIYSM 1020
            CSK F   RGG  +AGM     P+G + A + L T ESP DVVD +  + V P LL Y+AAC+ V+  E+ CP LL D  G L R          G VV P L H+GN+  +A++ T   +  + P     +D+YA+   + P+P  QS+VD   AL+ AAK      G  ++L ATRAL AL RDGV +LSLFEVLVF+Y+WH +AA   +                                                        L G + A    + P+WL      EG L  GLRRYAK K DF V+ L+P  A  R RAA AVR GIG GR +Y++
Sbjct:  649 CSKQFLGGRGGVATAGMVCVFTPAGVMVAWKVLPTAESPNDVVDFMRWMKVKPYLLSYDAACKLVKELEKYCPALLKDKTGVLQR-------DGEGNVVFPELVHVGNNRNSATRETAARTFQDLPRTTDREDMYAVIETAGPRPGLQSEVDSDEALFWAAKFSKV-VGGQSKLTATRALDALHRDGVRVLSLFEVLVFTYYWHRKAAGDATXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXLSGSRRASRVSALPSWLHASCISEGELETGLRRYAKAKVDFVVDCLKPLTAEVRERAAIAVRGGIGFGRDVYAL 969          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5JN33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN33_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 5.460e-25
Identity = 92/256 (35.94%), Postives = 128/256 (50.00%), Query Frame = 1
Query:  286 RVVLPHLAHLGNHSGTASQMTPRASSVNTPNRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGGAGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQR--HGVQGQGVPGSGGAEGGAGVPTAGETVVHHEAAKFLRVLLFCLVGDKAGNAPSFPTWLADG-------ATFEGVLVEGLRRYAKDKEDFWVNGLQPGGAGERTRAARAVRSGIGLGRGIYSMVS 1026
            RV LP LAHLG+++ + +   P+      P R S  D+ ALK  +      QSQV+ ++ L+ +A+ +G     A  LAATRA+AAL   G+ +LSLFEVLVF+Y W         ++  LG  GWT +R  HGV    VP    AE       + +TV    A K +R +L    G + G     P W   G       +T     ++GL  YA  K  F V+G+QP G  ER  A   +R GIG   G YS+++
Sbjct:   57 RVFLPALAHLGSNNASTTVEAPQVFLPVPPKRDSKVDLCALKAAAQGDRV-QSQVNVYDLLHASAETQGP-VPKAANLAATRAVAALWEAGIRVLSLFEVLVFTYVWLRNITEDEPDMLELGATGWTLRRPSHGV----VPVGTTAE-------SVDTVSTGAAEKHVREVLVVARGVRNGKGACLPDWFGAGDFVDGETSTLYAAQLDGLHAYAVAKTKFMVDGVQPIGEKERKIAESVIRCGIGYAAGEYSIMA 299          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5JGB2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB2_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 6.870e-18
Identity = 74/197 (37.56%), Postives = 101/197 (51.27%), Query Frame = 1
Query:  157 PNLLIYNAACQTVRAFEQRCPGLLDNGGKLPRL------------------PVEAGSTA-VGRVVLPHLAHLGNHSGTASQMTPRASSVNTPNRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGGAGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQR--HGV 684
            P L +Y+A C+ V   E+  PG+L N G+  RL                    E G  A   R+ L  LAHLG++S + +   P+ S    P R S  DVYALK  +      Q+QV+ ++ L+ +A+ +G     A  LAATRA+AALR  G+ +LS FEVLVF+Y W    A     +  LG  GWT +R  HGV
Sbjct:  250 PVLGMYDAGCKAVAHMEKHLPGVLQNRGRPTRLGDDGVGGGGSGYSNAASNDTEDGEPAPTPRIFLQALAHLGSNSASTTVEAPQVSLPVPPKRDSKVDVYALKAAAQGDRV-QNQVNVYDLLHASAETQGP-VPEAVNLAATRAVAALREAGIRVLSFFEVLVFTYVWLRNIAEDEPGMLELGATGWTLRRPSHGV 444          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5JGH9_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH9_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.260e-15
Identity = 60/135 (44.44%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  286 RVVLPHLAHLGNHSGTASQMTPRASSVNTPNRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGGAGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQR--HGV 684
            RV  P LAHLG+HS + +   P+ S    P R S  DVYALK  +      QSQV+ ++ L+ +A+ +G     A  LAATRA+A LR  GV +LSLFEVL+F+Y W    A     +  LG  GWT +R  HGV
Sbjct:  402 RVFFPALAHLGSHSSSTTVEAPQVSVPVPPKRDSKVDVYALKAAAQGDRV-QSQVNVYDLLHASAETQGP-VPKAVNLAATRAVAGLREAGVRVLSLFEVLIFTYVWLRNIAEDEPGMLELGATGWTLRRPSHGV 534          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5JT09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT09_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 6.520e-11
Identity = 71/221 (32.13%), Postives = 97/221 (43.89%), Query Frame = 1
Query:  286 RVVLPHLAHLGN----HSGTASQMTPRASSVNTP----NRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGGAGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQRHGVQGQGVPGSGGAEGGAGVPTAGETVVHHEAAKFLRVLLFCLVGDKAGNAPSFPTWLADG-------ATFEGVLVEGLRRYA 903
            R+  PH  H  +    H+  A+   P +     P     R S  DVYALK  +      QSQ++ ++ L  +A+ +G     A  LAATRA+AALR  G+ +L LFEVL+F+Y W    A     +  LG  GWT +R       +P    AE    V T        +A K LR +L    G + G     P W   G       +T     V+GL  YA
Sbjct:    4 RMASPHPHHAPSCRRWHTSAATAQVPPSKHRKFPYLYHQRDSKVDVYALKAAAQGDRV-QSQLNVYDLLLASAETQGP-VPKAVNLAATRAVAALREAGIRVLFLFEVLIFTYVWLRNIAEDEPGMLELGATGWTLRR-------LPVGTTAESVDAVSTG-------DAEKHLREVLVVARGARNGKGACLPDWFGAGDFVNGDTSTLYATQVDGLHAYA 208          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5KPP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 6.600e-10
Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = 1
Query:  319 NHSGTASQMTPRASSVNTPNRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGGAGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQR--HGV 684
            N+S + +   P+ S   TP R S  DVYALK  +      Q+QV+ ++ L+ +A+  G     A  LAATR +AALR   + ++SLFEVL+F+Y W    A     +  +G  GWT +R  HGV
Sbjct:   15 NNSASTTVEAPQVSLPVTPKRDSKVDVYALKAAAQGDRV-QNQVNVYDLLHASAETRGP-VPKAVNLAATRDVAALREAAIRVISLFEVLIFTYVWLRNIAEDEPGMLEIGAPGWTLRRPSHGV 136          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.240e-7
Identity = 41/107 (38.32%), Postives = 55/107 (51.40%), Query Frame = 1
Query:    4 CSKLFPSRGGRKSAGMFTCLVPSGCVWAERTLLTRESPMDVVDIIAELVVPPNLLIYNAACQTVRAFEQRCPGLLDNGGKLPRLPVEAGSTAVGRVVLPHLAHLGNH 324
            CSKLF  +    +AG+       G        +T ES  DVVDI+A ++V P L+I +  C+ V   E+  PGLL +GG LPR        A G+V L  L H+G H
Sbjct:   10 CSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPR-------DAEGQVCLKELQHIGAH 109          
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Match: A0A6H5K0A2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A2_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 2.320e-7
Identity = 52/143 (36.36%), Postives = 69/143 (48.25%), Query Frame = 1
Query:  508 ATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVLGDDGWTRQR--HGVQGQGVPGSGGAEGGAGVPTAGETVVHHEAAKFLRVLLFCLVGDKAGNAPSFPTWLA-------DGATFEGVLVEGLRRYAKD 909
            A  LAATRA+AALR  G+ ++SLFEVL+F+Y      A  +  +  L   GWT +R  HGV    VP    AE    V T+       +A K LR +L    G + G     P WL        D +T   + V+GL  YA +
Sbjct:  148 AVNLAATRAVAALREAGIRVISLFEVLIFTYVGLRNIAEDKPGMLELVATGWTLRRPFHGV----VPVGTTAESLDAVSTS-------DAEKHLRKVLVVARGARNGKGACLPDWLVAEDFVDGDTSTLYAIQVDGLHAYAAE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig107.664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KPP3_9PHAE2.870e-4437.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN33_9PHAE5.460e-2535.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGB2_9PHAE6.870e-1837.56CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JGH9_9PHAE3.260e-1544.44CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JT09_9PHAE6.520e-1132.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPP6_9PHAE6.600e-1038.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3W5_9PHAE1.240e-738.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0A2_9PHAE2.320e-736.36CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig107contigF-serratus_M_contig107:9277..11687 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1055
Cds size987
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig107.664.1prot_F-serratus_M_contig107.664.1Fucus serratus malepolypeptideF-serratus_M_contig107 9325..11667 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928911.734862-UTR-F-serratus_M_contig107:9276..93241622928911.734862-UTR-F-serratus_M_contig107:9276..9324Fucus serratus maleUTRF-serratus_M_contig107 9277..9324 +
1690962625.5707915-UTR-F-serratus_M_contig107:9276..93241690962625.5707915-UTR-F-serratus_M_contig107:9276..9324Fucus serratus maleUTRF-serratus_M_contig107 9277..9324 +
1622928911.800023-UTR-F-serratus_M_contig107:11667..116871622928911.800023-UTR-F-serratus_M_contig107:11667..11687Fucus serratus maleUTRF-serratus_M_contig107 11668..11687 +
1690962625.61104-UTR-F-serratus_M_contig107:11667..116871690962625.61104-UTR-F-serratus_M_contig107:11667..11687Fucus serratus maleUTRF-serratus_M_contig107 11668..11687 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928911.7463398-CDS-F-serratus_M_contig107:9324..94261622928911.7463398-CDS-F-serratus_M_contig107:9324..9426Fucus serratus maleCDSF-serratus_M_contig107 9325..9426 +
1690962625.5787413-CDS-F-serratus_M_contig107:9324..94261690962625.5787413-CDS-F-serratus_M_contig107:9324..9426Fucus serratus maleCDSF-serratus_M_contig107 9325..9426 +
1622928911.7592874-CDS-F-serratus_M_contig107:9696..104521622928911.7592874-CDS-F-serratus_M_contig107:9696..10452Fucus serratus maleCDSF-serratus_M_contig107 9697..10452 +
1690962625.5858507-CDS-F-serratus_M_contig107:9696..104521690962625.5858507-CDS-F-serratus_M_contig107:9696..10452Fucus serratus maleCDSF-serratus_M_contig107 9697..10452 +
1622928911.7714326-CDS-F-serratus_M_contig107:11113..111771622928911.7714326-CDS-F-serratus_M_contig107:11113..11177Fucus serratus maleCDSF-serratus_M_contig107 11114..11177 +
1690962625.5948172-CDS-F-serratus_M_contig107:11113..111771690962625.5948172-CDS-F-serratus_M_contig107:11113..11177Fucus serratus maleCDSF-serratus_M_contig107 11114..11177 +
1622928911.7825594-CDS-F-serratus_M_contig107:11602..116671622928911.7825594-CDS-F-serratus_M_contig107:11602..11667Fucus serratus maleCDSF-serratus_M_contig107 11603..11667 +
1690962625.6040883-CDS-F-serratus_M_contig107:11602..116671690962625.6040883-CDS-F-serratus_M_contig107:11602..11667Fucus serratus maleCDSF-serratus_M_contig107 11603..11667 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig107.664.1

>prot_F-serratus_M_contig107.664.1 ID=prot_F-serratus_M_contig107.664.1|Name=mRNA_F-serratus_M_contig107.664.1|organism=Fucus serratus male|type=polypeptide|length=329bp
MFTCLVPSGCVWAERTLLTRESPMDVVDIIAELVVPPNLLIYNAACQTVR
AFEQRCPGLLDNGGKLPRLPVEAGSTAVGRVVLPHLAHLGNHSGTASQMT
PRASSVNTPNRVSCQDVYALKHFSLPQPTPQSQVDEHNALYTAAKIEGGG
AGPATQLAATRALAALRRDGVSILSLFEVLVFSYHWHVQAAPSRSEVAVL
GDDGWTRQRHGVQGQGVPGSGGAEGGAGVPTAGETVVHHEAAKFLRVLLF
CLVGDKAGNAPSFPTWLADGATFEGVLVEGLRRYAKDKEDFWVNGLQPGG
AGERTRAARAVRSGIGLGRGIYSMVSSN*
back to top

mRNA from alignment at F-serratus_M_contig107:9277..11687+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig107.664.1 ID=mRNA_F-serratus_M_contig107.664.1|Name=mRNA_F-serratus_M_contig107.664.1|organism=Fucus serratus male|type=mRNA|length=2411bp|location=Sequence derived from alignment at F-serratus_M_contig107:9277..11687+ (Fucus serratus male)
ACGTGTTCCAAGCTGTTCCCCAGCCGAGGAGGAAGGAAGAGCGCGGGCAT GTTCACCTGCTTAGTTCCGTCCGGGTGTGTGTGGGCCGAGCGGACTTTGC TCACGCGCGAGAGCCCGATGGACGTAGTCGACATCATCGCCGAGCTTGTG GTGAGCGAACGGAAACCTTTCGCTTCCATCAGTGCATGGCTTGTCTGTTG GGTCATAATTTGCCTTAGGCCGTGGAGTGCCCCCAATAGGTCGAACGAAG TGCATCATAATACGTACCTGAGCCCATTTTTTCCTTGCCTTGCTGTTGTT AGGATCATATATTTGTAGGCACGAGGATAATTGTATGTGTTAACGACGCG TGATCTGTCTCGTGCCAACCACGTCTCGGCATGATTTTTTTTCTGTCGCG GTATCGTGTTCAATAAACAGGTGCCGCCGAATCTTCTTATTTACAATGCA GCATGCCAAACTGTTCGTGCTTTCGAACAGAGGTGCCCGGGTCTACTAGA TAACGGGGGAAAGCTGCCGCGCCTTCCAGTAGAAGCGGGATCGACGGCGG TGGGGCGCGTCGTGCTGCCCCATCTTGCTCACTTGGGAAACCATAGCGGC ACCGCCTCTCAGATGACCCCACGCGCCTCGTCTGTCAATACACCCAATAG GGTTAGTTGTCAAGACGTGTACGCCCTGAAGCACTTTTCCTTACCGCAGC CAACCCCTCAAAGCCAAGTAGACGAGCACAATGCTCTCTACACGGCGGCT AAAATAGAGGGGGGAGGAGCGGGTCCGGCGACGCAGTTGGCGGCTACTAG GGCCTTGGCGGCCTTGAGGCGAGACGGTGTAAGTATTCTGTCGCTCTTCG AGGTGCTCGTTTTCAGCTACCACTGGCATGTACAAGCAGCGCCGTCTAGG TCGGAAGTGGCGGTTCTGGGGGACGACGGATGGACTAGGCAACGGCACGG CGTGCAGGGACAGGGCGTACCGGGCAGCGGTGGGGCAGAGGGAGGGGCAG GCGTTCCGACAGCAGGCGAAACCGTCGTACACCACGAGGCTGCAAAGTTC CTGCGTGTGCTGCTGTTTTGTTTAGTTGGAGATAAGGCCGGTAACGCGCC TTCGTTCCCAACGTGGCTCGCAGATGGCGCTACCTTTGAGGGAGTGTTGG TCGAAGGGCTACGACGGTACGCTAAGGTGAGAACACGGCCATATCTGCCG TACTACCGCCAAGGGCATTCTACACCCAATATATGTGAATAAATGCTGAG GAGAGGTAATACGATTTTCTGTAGCGAAAACTAGATTTGTTTCATTTGTT TCATTTGGGAAAAGGGGGTATTCGGGGTGGGGGGGGGGGGGGGCAAATGT AAAACAATTGAAGCCCGACCACCTCTccCCCCCCTCCAGGACAACAGCAg GGGGGGGGACTGTCAAAATCTGCTCACCCCCCTGACCGTACCTCACGGGC TCGCCTGTACCACACACCACTTTCCACCTAGCTTTCACGTGATAGGTTGA CACCTGTGTACTAATGTAAACATCCGGTGTCATAGGTACATGAGGCTCTT GAAAGCCACCGTCTAGGTTGTAGGTTGCCTTTTGAGGTGTACCGTAAGTT TGCCGGGTTTTATCTGATAGCCGTTGTCATGGAAGACAAGCATAAACCAT CATGTGACCAAGATGTGCGTGTTCACGGTCCGGCTTGTACTTGGACAACT CTGTGAAAGCTTTCTTGCTGTAAATAATTCGCCCCCTTCTCTCCCCGTAA GCATTTAAATAATTCGGGGGAGAGCGAGACTGAAGGCAAAAAAGACTGCA CGCTTACCCCTATAATTTCCTGTCTCGTCTGTGTCAGGACAAGGAAGATT TCTGGGTCAATGGCCTACAGCCCGGTGGAGCTGGGGAGAGAACACGAGCA GGTGCGCACATGTTGCGGTTCGTCTTTATACACATGTTGCGGTTCGTCTT TATACGTGTATGAGGATCCTGTGACTCGACACGTGGGAATACTTTGTGGG CTTGTTTTGTCAGACAAAGATGTCGTGGTTGGTTGGTTGGCGTAGTGGAA CGGCGCCGTTTGTGAATTGCTAAAGGGCTGCGTGTGGTGACCTATGGATG TGGAATATTTACATACATCTGCGCCTGAACGGGGATTGCTTTGTGTCCCG TACTGTAGAGGTCGCAAAATCGGTGCAGGGATACATTCGATACGAACGAT GTGATCATGCCGACGTAGGGCGGATCAGATCTGACACGGTCTAACGTTTC CACCTTCACTGCCTGCGCTCACTCCGTTTAACCTCTGCCGTCTTTTGTTG AAACATTCACGTTTGCGCGAGTGCAGCAAGAGCGGTCCGTTCCGGGATTG GACTCGGTCGCGGCATCTACTCTATGGTATCAAGCAACTAGAACTCGCGC TGGCGGTTGGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig107:9277..11687+

>mRNA_F-serratus_M_contig107.664.1 ID=mRNA_F-serratus_M_contig107.664.1|Name=mRNA_F-serratus_M_contig107.664.1|organism=Fucus serratus male|type=CDS|length=1974bp|location=Sequence derived from alignment at F-serratus_M_contig107:9277..11687+ (Fucus serratus male)
ATGTTCACCTGCTTAGTTCCGTCCGGGTGTGTGTGGGCCGAGCGGACTTT
GCTCACGCGCGAGAGCCCGATGGACGTAGTCGACATCATCGCCGAGCTTG
TGATGTTCACCTGCTTAGTTCCGTCCGGGTGTGTGTGGGCCGAGCGGACT
TTGCTCACGCGCGAGAGCCCGATGGACGTAGTCGACATCATCGCCGAGCT
TGTGGTGCCGCCGAATCTTCTTATTTACAATGCAGCATGCCAAACTGTTC
GTGCTTTCGAACAGAGGTGCCCGGGTCTACTAGATAACGGGGGAAAGCTG
CCGCGCCTTCCAGTAGAAGCGGGATCGACGGCGGTGGGGCGCGTCGTGCT
GCCCCATCTTGCTCACTTGGGAAACCATAGCGGCACCGCCTCTCAGATGA
CCCCACGCGCCTCGTCTGTCAATACACCCAATAGGGTTAGTTGTCAAGAC
GTGTACGCCCTGAAGCACTTTTCCTTACCGCAGCCAACCCCTCAAAGCCA
AGTAGACGAGCACAATGCTCTCTACACGGCGGCTAAAATAGAGGGGGGAG
GAGCGGGTCCGGCGACGCAGTTGGCGGCTACTAGGGCCTTGGCGGCCTTG
AGGCGAGACGGTGTAAGTATTCTGTCGCTCTTCGAGGTGCTCGTTTTCAG
CTACCACTGGCATGTACAAGCAGCGCCGTCTAGGTCGGAAGTGGCGGTTC
TGGGGGACGACGGATGGACTAGGCAACGGCACGGCGTGCAGGGACAGGGC
GTACCGGGCAGCGGTGGGGCAGAGGGAGGGGCAGGCGTTCCGACAGCAGG
CGAAACCGTCGTACACCACGAGGCTGCAAAGTTCCTGCGTGTGCTGCTGT
TTTGTTTAGTTGGAGATAAGGCCGGTAACGCGCCTTCGTTCCCAACGTGG
CTCGCAGATGGCGCTACCTTTGAGGGAGTGTTGGTCGAAGGGCTACGACG
GTACGCTAAGGTGCCGCCGAATCTTCTTATTTACAATGCAGCATGCCAAA
CTGTTCGTGCTTTCGAACAGAGGTGCCCGGGTCTACTAGATAACGGGGGA
AAGCTGCCGCGCCTTCCAGTAGAAGCGGGATCGACGGCGGTGGGGCGCGT
CGTGCTGCCCCATCTTGCTCACTTGGGAAACCATAGCGGCACCGCCTCTC
AGATGACCCCACGCGCCTCGTCTGTCAATACACCCAATAGGGTTAGTTGT
CAAGACGTGTACGCCCTGAAGCACTTTTCCTTACCGCAGCCAACCCCTCA
AAGCCAAGTAGACGAGCACAATGCTCTCTACACGGCGGCTAAAATAGAGG
GGGGAGGAGCGGGTCCGGCGACGCAGTTGGCGGCTACTAGGGCCTTGGCG
GCCTTGAGGCGAGACGGTGTAAGTATTCTGTCGCTCTTCGAGGTGCTCGT
TTTCAGCTACCACTGGCATGTACAAGCAGCGCCGTCTAGGTCGGAAGTGG
CGGTTCTGGGGGACGACGGATGGACTAGGCAACGGCACGGCGTGCAGGGA
CAGGGCGTACCGGGCAGCGGTGGGGCAGAGGGAGGGGCAGGCGTTCCGAC
AGCAGGCGAAACCGTCGTACACCACGAGGCTGCAAAGTTCCTGCGTGTGC
TGCTGTTTTGTTTAGTTGGAGATAAGGCCGGTAACGCGCCTTCGTTCCCA
ACGTGGCTCGCAGATGGCGCTACCTTTGAGGGAGTGTTGGTCGAAGGGCT
ACGACGGTACGCTAAGGACAAGGAAGATTTCTGGGTCAATGGCCTACAGC
CCGGTGGAGCTGGGGAGAGAACACGAGCAGGACAAGGAAGATTTCTGGGT
CAATGGCCTACAGCCCGGTGGAGCTGGGGAGAGAACACGAGCAGCAAGAG
CGGTCCGTTCCGGGATTGGACTCGGTCGCGGCATCTACTCTATGGTATCA
AGCAACTAGCAAGAGCGGTCCGTTCCGGGATTGGACTCGGTCGCGGCATC
TACTCTATGGTATCAAGCAACTAG
back to top