mRNA_F-serratus_M_contig1064.644.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A1Y1HMY1_KLENI (Helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HMY1_KLENI) HSP 1 Score: 105 bits (262), Expect = 1.060e-23 Identity = 58/132 (43.94%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPP--PATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVV------IYASRTHSQLSQ 372 MP + + G V FPF YDCQL Y+ V+ AL +NALLESPTGTGKTLCLLCA+LAW++ +A + QPP P P + A + P + T G + + P+ + +Y+SRTHSQL Q Sbjct: 1 MPVYTLRGVQVDFPFSAYDCQLVYMERVIQALQTGQNALLESPTGTGKTLCLLCATLAWRESLKTANKPQPPNPQGPPVQAAGNWQPQSSALPLTSGEAFTGGFLSQVSNPNTISALPTIVYSSRTHSQLQQ 132
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A7S4AI69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI69_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.320e-23 Identity = 55/118 (46.61%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 7 SFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHS 360 + ++ G P+ FPFKPY CQ Y+ V+ AL S+NALLESPTGTGKTLCLLCA+LAWQ++ A + Q T QT S ++ QQ + V +IYASRTHS Sbjct: 6 TIELRGVPIHFPFKPYKCQEDYMGKVLDALLRSENALLESPTGTGKTLCLLCATLAWQREQARILRGQSEY--GTIAVPIQTALPSSSSQETQQQKNRRVP-------TIIYASRTHS 114
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A095C263_SCHHA (Regulator of telomere elongation helicase 1 n=5 Tax=Schistosoma TaxID=6181 RepID=A0A095C263_SCHHA) HSP 1 Score: 105 bits (261), Expect = 1.440e-23 Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSV--------VIYASRTHSQLSQA 375 MP I+G + FP++PYDCQ+ Y+ V+ +LNE K+A+LESPTGTGKTLCLLCASLAW K A++++S T ++ T+ RP + T +S + L S+ +I+ASRTHSQL+QA Sbjct: 1 MPQIAIDGVEIDFPYQPYDCQIEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLDKQANSVQS------ITNAKHQNTMG--KRPTSDNVDNT--LSHQNFLASLGKVNNGCKIIFASRTHSQLAQA 123
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: D8LG74_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG74_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.630e-23 Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 106 KNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAY-EQTVTDLSRPR---QPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 KNALLESPTGTGKTLCLL ASLAWQQ+N++ + S+P P T+LAY E+ VTDLSRPR QP Q ++ A+PSV+IYASRTHSQL Q Sbjct: 2 KNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAP---TQLAYDERPVTDLSRPRHEQQPYQENKPALAA--AMPSVIIYASRTHSQLGQ 89
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A2P4XZQ0_9STRA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZQ0_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.720e-23 Identity = 60/126 (47.62%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAM--ESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 M + +I G PV FPF PYD QL Y+ V+ AL+ +NA+LESPTGTGKTLCLLCA+LAW+++ + S P LAYE +D G S P LP + IY+SRTHSQL Q Sbjct: 1 MVTLEICGIPVEFPFPPYDSQLIYMEKVLLALSSKQNAILESPTGTGKTLCLLCATLAWRRELQKKLGTSSLAQKRPGGSLAYEGYGSD-------------GESEAPQLPRI-IYSSRTHSQLKQ 112
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A1E7FWS7_9STRA (DNA repair helicase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWS7_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.580e-23 Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 16 IEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 + G P+ FPF+PY CQ Y+ V+ ALN S+NALLESPTGTGKTLCLLC++LAWQ++ A + +P + +P Q+R+ V +IYASRTHSQLSQ Sbjct: 1 LRGVPIHFPFQPYKCQQDYMEKVLDALNRSENALLESPTGTGKTLCLLCSALAWQREQAKDLNIKPNGDFGSSXXXXXXXXXXXXXXEPTQHRSRRVP-------TIIYASRTHSQLSQ 112
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: I0Z7K7_COCSC (DNA repair helicase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z7K7_COCSC) HSP 1 Score: 104 bits (259), Expect = 2.590e-23 Identity = 58/124 (46.77%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MP++ I G V FP + Y+CQ+TY+ V+TAL E KNALLESPTGTGKTLCLLCA+LAWQ+ ++ + +TDL R+ +S P + IYASRTHSQL+Q Sbjct: 1 MPTYSIRGIEVQFPHEAYECQVTYMERVITALQEGKNALLESPTGTGKTLCLLCATLAWQESLKQGKVTKKMHNHISHTKKSFGLTDL---------RSGDLSATPTI----IYASRTHSQLAQ 111
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A6G0XJA7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJA7_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.630e-23 Identity = 58/124 (46.77%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MP+ +I G PV FPF+PY+ QL Y+ VV AL +NA+LESPTGTGKTLCLLCA+L W+ ++SQ +L YE T+ + + N+ LP + IYASRTHSQL Q Sbjct: 1 MPTLNICGVPVSFPFEPYESQLVYMEKVVRALESKQNAMLESPTGTGKTLCLLCATLGWRVHRKKQLKSQSS---KKKLQYEDAATEDNEEANEETNK---------LPKI-IYASRTHSQLKQ 111
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A8J5IT16_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IT16_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.560e-23 Identity = 62/127 (48.82%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQ---QKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 M +I G PV FPF PYD QL Y+ V+ AL +NA+LESPTGTGKTLCLLCA+LAW+ QK P P LAYE +D G S P LP + IY+SRTHSQL Q Sbjct: 1 MVKLEICGIPVEFPFPPYDSQLIYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAWRRELQKKLGTSTLAPTKRPGASLAYEGYGSD-------------GESDAPQLPRI-IYSSRTHSQLKQ 113
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: G4YUL1_PHYSP (DNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID=G4YUL1_PHYSP) HSP 1 Score: 103 bits (258), Expect = 3.630e-23 Identity = 63/131 (48.09%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQ-------KNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 M +I G PV FPF PYD QL Y+ V+ AL +NA+LESPTGTGKTLCLLCA+LAW++ K+A A S P LAYE +D G S P LP + IY+SRTHSQL Q Sbjct: 1 MVRLEICGIPVEFPFPPYDSQLVYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAWRRQLQKTLGKSAMATSSAAQQRPGASLAYEGYGSD-------------GESDAPQLPRI-IYSSRTHSQLKQ 117 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1064.644.1 >prot_F-serratus_M_contig1064.644.1 ID=prot_F-serratus_M_contig1064.644.1|Name=mRNA_F-serratus_M_contig1064.644.1|organism=Fucus serratus male|type=polypeptide|length=137bp MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLback to top mRNA from alignment at F-serratus_M_contig1064:279788..281603+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1064.644.1 ID=mRNA_F-serratus_M_contig1064.644.1|Name=mRNA_F-serratus_M_contig1064.644.1|organism=Fucus serratus male|type=mRNA|length=1816bp|location=Sequence derived from alignment at F-serratus_M_contig1064:279788..281603+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1064:279788..281603+ >mRNA_F-serratus_M_contig1064.644.1 ID=mRNA_F-serratus_M_contig1064.644.1|Name=mRNA_F-serratus_M_contig1064.644.1|organism=Fucus serratus male|type=CDS|length=822bp|location=Sequence derived from alignment at F-serratus_M_contig1064:279788..281603+ (Fucus serratus male)back to top |