mRNA_F-serratus_M_contig1064.638.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1064.638.1 vs. uniprot
Match: A0A5N1IU35_9BACT (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=Adhaeribacter soli TaxID=2607655 RepID=A0A5N1IU35_9BACT) HSP 1 Score: 460 bits (1183), Expect = 2.320e-147 Identity = 280/655 (42.75%), Postives = 392/655 (59.85%), Query Frame = 3 Query: 348 RFQFEDIQLVVCKGQKLGLVGINGCGKSTLLKVLGKKEACDAGTIESPKATVVTYVDQDPVFA-EGATVRDAVFAADNTLMRAVREYQVATESVEAAASKPDNLDEAMGRFERAAATMDSVGGWDAETFAQQVMSRLNVMDLQDIPVANLSGGQCKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERLLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGNYERFLELKEERMNAAGAARDAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNEKGLTLSSTTTRLGKTVVYLKGASLMF-SAKILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGNQPLDSGEVVAGETVRYGYYEQGGLANMDQDLRVMELVEDTCAASEVFDADVEVVAPQVRARRLLNLFQFPAARWNDRVERLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGLVRDFQGTFTEYLEYRQDQMKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPVEHAGGD---KKRKLSSTERYEFTNLEKAIDALSERTKELEKLLEGAQRKGAGYSEIGEWMEELSRVEEETEAKTDRWLELAEI 2297 R+ F+D+ + +GQ++GLVG+NG GK+TLL++L + D+G++ + +V Y+ Q+PVF E ATV++A+F+ N + A+REY+ AA +N+D + ++A M + WD E +Q++ +L + DL P+ LSGGQ KRVA+A LI +PD+L+LDEPTNHLD+D IEWLE +L+ + T + VTHDRYFL+ V EI ELD +++ Y GNY FLE K ER G D ARN MR EL WMR+QPKAR KSK+R + F+E K KAA S L LS TTR G ++ + S F + K++D F+Y F K DRIGI+G NG+GK+T LN+L G DSGE+ GET +GYY Q L +D RV+++V++ E +V + A + L FQF A+ V +LSGGEKRRLQLL+VL +PNFL+LDEPTNDLDI++L ILEDFLLN + GCL+IVSHDR+FMD++ H FIFEG+G +R+F G +T+Y E+ ++Q K +P GD KKRK S E+ E+ LEK I+ L R E L+ + ++ E+ ++ ++ + K +RWLEL EI Sbjct: 16 RWLFKDLNFGINRGQRIGLVGVNGTGKTTLLRILAGEIQPDSGSVSTRNGILVGYLSQNPVFLNEDATVQEALFSGTNDTLNAIREYE--------AAMANENIDHDV--LQKAMDRMTDLNAWDYEQKVKQILGKLGIPDLNR-PIRVLSGGQRKRVAMARMLITEPDLLILDEPTNHLDLDTIEWLENVLSTQQQTLLMVTHDRYFLDRVATEIAELDQGQVFSYKGNYAYFLEKKAEREEMQGVEVDRARNLMRKELEWMRRQPKARGTKSKSRIDAFYETKEKAAGK--SQGPSLDLSVKTTRQGNKILEVSHISKSFGNKKVIDNFSYVFKKKDRIGIIGPNGMGKSTLLNILTGLIQPDSGEIEKGETTVFGYYTQTELT-FKEDQRVIDIVKEVAEVVETAKGEV------ISASQFLQHFQFAPAQQYTMVGKLSGGEKRRLQLLRVLIKNPNFLILDEPTNDLDIITLNILEDFLLN-FGGCLLIVSHDRYFMDQLIDHAFIFEGNGRIRNFPGNYTDYREWLKEQDKTV------------------NLQPEKPKTANPAPAAAPTGDPFEKKRKASFKEKQEYEQLEKDIEKLELRK---EALVAEMNSGALDHQQLSAAAAEMEQINKDLDQKGERWLELGEI 628
BLAST of mRNA_F-serratus_M_contig1064.638.1 vs. uniprot
Match: UPI000E0CBD4C (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=Botryobacter ruber TaxID=2171629 RepID=UPI000E0CBD4C) HSP 1 Score: 459 bits (1182), Expect = 2.790e-147 Identity = 281/664 (42.32%), Postives = 392/664 (59.04%), Query Frame = 3 Query: 309 LIADGLINTFDGTRFQFEDIQLVVCKGQKLGLVGINGCGKSTLLKVLGKKEACDAGTIESPKATVVTYVDQDPVFAEGATVRDAVFAADNTLMRAVREYQVATESVEAAASKPDNLDEAMGRFERAAATMDSVGGWDAETFAQQVMSRLNVMDLQDIPVANLSGGQCKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERLLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGNYERFLELKEERMNAAGAARDAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNEKGLTLSSTTTRLGKTVVYLKGASLMFSAK-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGNQPLDSGEVVAGETVRYGYYEQGGLANMDQDLRVMELVEDTCAASEVFDADVEVVAPQVRARRLLNLFQFPAARWNDRVERLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGLVRDFQGTFTEYLEYRQDQMKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPVEHAGGDKKRKLSSTERYEFTNLEKAIDALSERTKELEKLLEGAQRKGAGYSEIGEWMEELSRVEEETEAKTDRWLELAEI 2297 L A+ + +F G R+ F+++ + +GQ++ LVG+NG GK+TLL VL K D G++ + K V Y+ Q+P F E TV+ +F+ + ++ +R+Y+ A +A++ L ER M+ + WD E +Q++S+L + +L D PV LSGGQ KRVA+A LI++PD+L+LDEPTNHLD+D IEWLE LL+ + T + VTHDRYFL+ V EI ELD +LY Y GNY F+E K R + A + ARN MR EL W+R+QPKAR K+K R + F ELK KAA L LS TTR G ++ + S F K I+D F+Y F K DRIGIVG NG GK+TFLN+L G DSG V AG+T +GYY Q L +D RV+++V++ E+ + +V + A + L FQF + V +LSGGEKRRLQLL+VL +PNFL+LDEPTNDLDI++L ILEDFLLN + GCL++VSHDR+FMD++ HLF+FEG G +R+F G +T+Y E+ ++Q A + E G KRK + E+ E+ LEK I+ L R EL + + ++++ W EL + E+ E K RWLELAE+ Sbjct: 4 LSAENIAKSF-GDRWLFKNLNFGLSQGQRVALVGVNGSGKTTLLNVLAGKLPPDEGSVSTRKEITVGYLGQNPEFDEELTVQQNIFSGQSEVLDLIRDYEAALADPSTSAARMQQL------MER----MEELQAWDFELKVKQILSKLGINNL-DTPVKTLSGGQRKRVAMARVLIEEPDLLILDEPTNHLDLDTIEWLENLLSTQNTTLLMVTHDRYFLDKVANEIAELDNGQLYTYKGNYSYFVEKKAAREESEAAETEKARNLMRKELDWIRRQPKARGTKAKYRVDAFEELKEKAAKKVAGP--ALELSVKTTRQGGKIIEVDHISKSFGEKKIVDNFSYVFKKKDRIGIVGPNGAGKSTFLNMLTGKLAPDSGTVEAGQTTVFGYYTQDELT-FKEDQRVIDIVKEIAEVVEMANGEV------ITAAQFLQHFQFAPPQQYTFVSKLSGGEKRRLQLLRVLIKNPNFLILDEPTNDLDIITLNILEDFLLN-FNGCLLMVSHDRYFMDRLVDHLFVFEGKGKIRNFPGNYTDYREWLKEQENQPAEQKPAIPAPV------------------APKQEQPSG--KRKATYNEKKEYETLEKEIEQLEARKTELTEAMTAGTT--TDHTQLTSWATELETINEQLEEKEFRWLELAEL 623
BLAST of mRNA_F-serratus_M_contig1064.638.1 vs. uniprot
Match: A0A1G9J1T5_9BACT (ATP-binding cassette, subfamily F, uup n=1 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G9J1T5_9BACT) HSP 1 Score: 459 bits (1181), Expect = 4.320e-147 Identity = 281/652 (43.10%), Postives = 381/652 (58.44%), Query Frame = 3 Query: 342 GTRFQFEDIQLVVCKGQKLGLVGINGCGKSTLLKVLGKKEACDAGTIESPKATVVTYVDQDPVFAEGATVRDAVFAADNTLMRAVREYQVATESVEAAASKPDNLDEAMGRFERAAATMDSVGGWDAETFAQQVMSRLNVMDLQDIPVANLSGGQCKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERLLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGNYERFLELKEERMNAAGAARDAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNEKGLTLSSTTTRLGKTVVYLKGASLMFSAK-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGNQPLDSGEVVAGETVRYGYYEQGGLANMDQDLRVMELVEDTCAASEVFDADVEVVAPQVRARRLLNLFQFPAARWNDRVERLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGLVRDFQGTFTEYLEYRQDQMKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPVEHAGGDKKRKLSSTERYEFTNLEKAIDALSERTKELEKLLEGAQRKGAGYSEIGEWMEELSRVEEETEAKTDRWLELAE 2294 G R+ F + L V +G K+ LVG+NG GKSTLLKVL D G + V + Q+P F E ATV D V + D+ L AV+ Y+ A +AA A MD W+ ET +Q +++L V DL + V LSGGQ KR+ LA L+ +PD+L+LDEPTNHLD+ IEWLE LA R T + VTHDRYFLE + I+EL+ +LYRY GNY FLE KEER + D ARN MR EL WMR+QPKAR KS+AR + F+EL+ KA P + GL LS T R GK ++ ++ K ++D+F+Y F + DRIGI+G NG GKTTFL +L G D+G V G T +GYYEQ + ++ D RV+++V++T V + V A +LL FQFP AR V +LSGGE+RR+QLL+VL PNFL+LDEPTNDLD+++L +LE+FLL D++GCL+IVSHDR+FMD++ +HLF+FEGDG +R+F G +T+Y + Q Q AA +P +KLS E+ E+ +LE ID+L R EL +LL + ++ +W +++ ++ E E KTDRWLEL+E Sbjct: 15 GDRWLFHRVSLGVSQGDKVALVGVNGSGKSTLLKVLAGLIPPDEGEVAVTAGIRVGMMSQNPTFHEDATVLDNVLSMDHPLALAVKAYEQALTGGKAA------------EITAATLRMDEQQAWEFETQIRQTLTQLGVPDLHQV-VRQLSGGQRKRLDLARVLLSEPDLLILDEPTNHLDLATIEWLEGHLASRQQTLLLVTHDRYFLERITNVIVELNEGQLYRYEGNYAYFLEKKEERQAQQASETDKARNLMRRELEWMRRQPKARGTKSQARIDAFYELEKKAQGP--GQKAGLDLSVPTARQGKKIMEVEDLQKSLGGKRLVDDFSYAFKRKDRIGIIGPNGTGKTTFLRLLTGQLSPDAGVVDVGSTTVFGYYEQE-VFDLPADKRVIDVVKETAEVMTVGKGET------VSASQLLQRFQFPPARQYTPVGKLSGGEQRRIQLLRVLIRQPNFLILDEPTNDLDLITLNLLEEFLL-DFEGCLLIVSHDRYFMDRLVEHLFVFEGDGKIRNFPGNYTDYRAFAQQQEATAAEVKWAEEKNRPTP----------------TPSTAPKTSSAKKLSFKEQREYESLEAEIDSLEGRKAELIQLLSSGSE---NHEDLTQWAQQIETLDAELEQKTDRWLELSE 624
BLAST of mRNA_F-serratus_M_contig1064.638.1 vs. uniprot
Match: A0A3D8LE73_9BACT (ABC transporter ATP-binding protein n=2 Tax=Pontibacter TaxID=323449 RepID=A0A3D8LE73_9BACT) HSP 1 Score: 459 bits (1180), Expect = 6.270e-147 Identity = 296/665 (44.51%), Postives = 404/665 (60.75%), Query Frame = 3 Query: 309 LIADGLINTFDGTRFQFEDIQLVVCKGQKLGLVGINGCGKSTLLKVLGKKEACDAGTIESPKATVVTYVDQDPVFAEGATVRDAVFAADNTLMRAVREYQVATESVEAAASKPDNLDEAMGRF-ERAAATMDSVGGWDAETFAQQVMSRLNVMDLQDIPVANLSGGQCKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERLLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGNYERFLELKEERMNAAGAARDAARNKMRGELAWMRKQPKARQAKSKARQERFFELKAKAAAPAGSNEKGLTLSSTTTRLGKTVVYLKGASLMFSAK-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGNQPLDSGEVVAGETVRYGYYEQGGLANMDQDLRVMELVEDTCAASEVFDADVEVVAPQVRARRLLNLFQFPAARWNDRVERLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGLVRDFQGTFTEYLEYRQDQMKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPVEHAGGDKKRKLSSTERYEFTNLEKAIDALSERTKELEKLLEGAQRKGAGYSEIGEWMEELSRVEEETEAKTDRWLELAEI 2297 L AD + +F R+ F+++ + +GQ++ LVG+NG GK+TLL VL D G++ K + Y+ Q+P F E TV +F+ N + +R+Y EAA + PD E M ER MD + WD E +QV+S+L + +L D + NLSGGQ KRVA+A LI++PD+L++DEPTNHLD+D IEWLE +L+ + T + VTHDRYFL+ V EI ELD ++Y Y GNY F+E K ER AA A + ARN MR EL W+R+ PKAR K+K R + F ELK KAA + L LS TTR G ++ ++ S F K I+D+F Y F K DRIG+VG NG GK+TFLN+L G DSG + G+T +GYY Q L +D RV+++V+D E+ + +V + A + L FQFP A+ V +LSGGEKRRLQLL+VL +PNFL+LDEPTNDLDI++L ILEDFLLN + GCL+IVSHDR+FMD++ +HLF+FEG+G +R+F G +T+Y E++++Q + XXXXXXXXXXXXXXX KRK S E+ E+ LEK I L R EL + + + ++ W EL + + E K RWLEL+E+ Sbjct: 4 LSADNISKSFS-ERWLFKNLNFGISQGQRIVLVGVNGSGKTTLLNVLAGHLPPDEGSVSVRKEVTIGYLGQNPAFDEELTVHQNIFSGQNETLDLIRDY-------EAAMANPDTTGEKMQELMER----MDELQAWDFEVKVKQVLSKLGINNL-DAVIKNLSGGQRKRVAMARVLIEEPDLLIMDEPTNHLDLDTIEWLEGMLSTQNTTLLMVTHDRYFLDKVANEIAELDNGEIYTYKGNYSYFIEKKAEREEAAVAETEKARNLMRKELEWIRRMPKARGTKAKYRVDAFEELKEKAAKKTSGPQ--LELSVKTTRQGGKIIEVEHISKSFGEKKIVDDFTYVFKKKDRIGVVGPNGAGKSTFLNMLTGKLQPDSGYIDPGQTTVFGYYTQDELT-FREDQRVIDIVKDIAEVVEMANGEV------ITASQFLQHFQFPPAQQYTFVSKLSGGEKRRLQLLRVLIKNPNFLILDEPTNDLDIITLNILEDFLLN-FGGCLLIVSHDRYFMDRLVEHLFVFEGEGEIRNFPGNYTDYREWQKEQEREXXXXXXXXXXXXXXXXX----------------XXXXXXXXKRKASYAEQKEYEQLEKDIAKLESRKAELTETMTAGTT--TDHEQLTAWATELESINDTLEEKEFRWLELSEL 627
BLAST of mRNA_F-serratus_M_contig1064.638.1 vs. uniprot
Match: A0A7S2ZBK7_9RHOD (Probable ATP-dependent transporter ycf16 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBK7_9RHOD) HSP 1 Score: 460 bits (1183), Expect = 6.630e-147 Identity = 281/658 (42.71%), Postives = 389/658 (59.12%), Query Frame = 3 Query: 291 TGTQQLLIADGLINTFDGTRFQFEDIQLVVCKGQKLGLVGINGCGKSTLLKVLGKKEACDAGTIESPKATVVTYVDQDPVFAEGATVRDAVFAADNTLMRAVREYQVATESVEAAASKPDNLDEAMGRFERAAATMDSVGGWDAETFAQQVMSRLNV--MDLQDIPVANLSGGQCKRVALAAALIQKPDVLLLDEPTNHLDVDAIEWLEKLLAERLLTFVCVTHDRYFLENVCQEIIELDTAKLYRYPGNYERFLELKEERMNAAGAARDAARNKMRGELAWMRKQPKARQAKSKARQERFFELKA---KAAAPAGSNEKGLTLSSTTTRLGKTVVYLKGASLMFSAK-ILDEFAYEFDKGDRIGIVGGNGVGKTTFLNVLMGNQPLDSGEVVAGETVRYGYYEQGGLANMDQDLRVMELVEDTCAASEVFDADVEVVAPQVRARRLLNLFQFPAARWNDRVERLSGGEKRRLQLLQVLATSPNFLVLDEPTNDLDILSLQILEDFLLNDYKGCLVIVSHDRFFMDKVAKHLFIFEGDGLVRDFQGTFTEYLEYRQDQMKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPVEHAGGDK---KRKLSSTERYEFTNLEKAIDALSERTKELEKLLEGAQRKGAGYSEIGEWMEEL 2237 T QL+ +G+ ++ G R Q ED +++ KG KLG++G+NG GKSTLL +L +KE D+G + K V VDQDP + T + VFAADN RA+R+Y+ ++ + L M MDS+ WDAE A+Q++SRL + L++ LSGGQ KRVALAAAL+Q PDVL+LDEPTNHLD+DAIE+LE + LT V VTHDRYFL+ C +I+EL +Y + G Y++FL K R+ + A ++R E WMR+QPKAR KSK+R +RF+ L++ K A PA + L+S +R+G + A L F + IL F+YEF + DRIGIVGGNGVGKTTFL VLM Q LD+GEV+ GETV +GYY Q G+ + +RV + V+D A++V P + ++L + F + ++RLSGGEKRRLQLL+V+ PNFLVLDE TNDLD+ +L +LE+FLL DY G LV+VSHDRFFMD++A HLFIFEGDG ++DF G F++YL+ R++++ SS K K+K+S+ ER E+ ++ + IDAL+ R +LE L + Y+++ EEL Sbjct: 36 TAGSQLIWCEGISKSYCGVRVQVEDADIILTKGSKLGVIGVNGAGKSTLLNILARKEIPDSGAVRYRKGLRVVIVDQDPQMDDDMTPMECVFAADNPTNRAIRDYEDVLARLDKKQCGQEELQRVMNN-------MDSLHAWDAEANARQILSRLGLDFRSLRNRKFRLLSGGQQKRVALAAALVQNPDVLILDEPTNHLDIDAIEFLENAIRAPELTVVLVTHDRYFLDRSCTDIMELYRGNVYNHSGGYDKFLLNKALRLKEEEHIAEVALGRLRKEAEWMRRQPKARSTKSKSRIDRFYSLQSMAKKRARPAS-----VELASKVSRMGNKTLEFIDADLAFDQRVILKSFSYEFKRNDRIGIVGGNGVGKTTFLRVLMQLQNLDAGEVIIGETVVFGYYNQAGV-DFPPKVRVFDYVKDILYANDV---------PDPKPIKVLEQYGFETEQMYTEIDRLSGGEKRRLQLLEVMTKDPNFLVLDEVTNDLDLQTLTLLENFLL-DYSGVLVVVSHDRFFMDRIASHLFIFEGDGKIQDFNGNFSDYLDVRREKIPEP----------------DSSSMNDTSESNGSSQGHQRSNSKTAPKKKMSNKERKEYESILEEIDALAARQADLESSLVSGK---LDYAQLSSRTEEL 651 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1064.638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1064.638.1 >prot_F-serratus_M_contig1064.638.1 ID=prot_F-serratus_M_contig1064.638.1|Name=mRNA_F-serratus_M_contig1064.638.1|organism=Fucus serratus male|type=polypeptide|length=766bp MKACNRLPLVTVLMMALCNGSEAVCFVGVYAPASPWRRTRTACMQRRVVRback to top mRNA from alignment at F-serratus_M_contig1064:66444..90099+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1064.638.1 ID=mRNA_F-serratus_M_contig1064.638.1|Name=mRNA_F-serratus_M_contig1064.638.1|organism=Fucus serratus male|type=mRNA|length=23656bp|location=Sequence derived from alignment at F-serratus_M_contig1064:66444..90099+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1064:66444..90099+ >mRNA_F-serratus_M_contig1064.638.1 ID=mRNA_F-serratus_M_contig1064.638.1|Name=mRNA_F-serratus_M_contig1064.638.1|organism=Fucus serratus male|type=CDS|length=4596bp|location=Sequence derived from alignment at F-serratus_M_contig1064:66444..90099+ (Fucus serratus male)back to top |