mRNA_F-serratus_M_contig1063.632.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1063.632.1
Unique NamemRNA_F-serratus_M_contig1063.632.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1063.632.1 vs. uniprot
Match: A0A0M1JP84_9CYAN (Aspartate aminotransferase n=3 Tax=Planktothricoides TaxID=132607 RepID=A0A0M1JP84_9CYAN)

HSP 1 Score: 95.9 bits (237), Expect = 3.650e-19
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 3 
Query:  339 IEAVLSRYAGMHPKPANLAQGVAHWDPPLAALNEITRDEDKIQGTGLIDSSYHKYGPALGLPALRKALIGKLVQENGLDMTGQELMVTAGGNQAFAMVSLALLDPGDRVLLARPFYCAHQCAVQLAGGSLVECGWDPS-TLLPD 767
            I  V+       P   +LAQGV ++DPP    ++I +         L D   HKY   +G+PAL  A+  KL  ENG+DMTG+ ++VTAGGN  F    LA+  PGD ++L  P+Y  H+ A+ +A    V    D +  L PD
Sbjct:   15 IIPVVGELIRRSPGTISLAQGVVYYDPPSEVESQINQF--------LADRDNHKYKAVVGIPALHDAIAHKLSAENGIDMTGRAIVVTAGGNMGFINAVLAITSPGDEIILQTPYYFNHEMAIAIASCRAVLVSTDENYQLRPD 150
[Close]
BLAST of mRNA_F-serratus_M_contig1063.632.1 vs. uniprot
Match: A0A7S1U2Z5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2Z5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.390e-18
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 3 
Query:  387 NLAQGVAHWDPPLAALNEITRDEDKIQGTGLIDSSYHKYGPALGLPALRKALIGKLVQENGLDMTGQELMVTAGGNQAFAMVSLALLDPGDRVLLARPFYCAHQCAVQLAGGSLVECGWDPSTLLP 764
            +LAQG+ +W PP  AL +            +  S    YG   G P LR+ + GKL  ENGL  +G ++M+T+G NQAF  V +AL+DPGD+V +  PFY  H  A+Q+    +V    DP TLLP
Sbjct:   29 SLAQGIVYWGPPAEALGDAA--------AAVSQSVTSAYGADDGAPELRQKIQGKLEAENGL--SGVQVMLTSGANQAFMNVVMALVDPGDKVGVVPPFYFNHVMALQMNAAEIVHLEPDPETLLP 144
[Close]
BLAST of mRNA_F-serratus_M_contig1063.632.1 vs. uniprot
Match: A0A522ML19_9BACT (Pyridoxal phosphate-dependent aminotransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522ML19_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 4.620e-18
Identity = 51/125 (40.80%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:  348 VLSRYAGMHPKPANLAQGVAHWDPPLAALNEITRDEDKIQGTGLIDSSYHKYGPALGLPALRKALIGKLVQENGLDMTGQE-LMVTAGGNQAFAMVSLALLDPGDRVLLARPFYCAHQCAVQLAG 719
            V+ R    +P   +L QGV  + PP  AL  + R           D + H YGP  G+P L +A+ GKL  +NG+ +T +  ++VTAGGN AFA   LA+ DPGD V+L  P+Y  H+ AV +AG
Sbjct:   17 VVGRLIRDNPGTISLGQGVVSYPPPPEALEAVARFA--------ADPANHTYGPVEGIPPLLEAIRGKLAVDNGVTVTDESRIVVTAGGNMAFANAVLAVTDPGDEVILLEPYYFNHRMAVTIAG 133
[Close]
BLAST of mRNA_F-serratus_M_contig1063.632.1 vs. uniprot
Match: A0A1V0DJA1_9BACT (Aminotransferase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DJA1_9BACT)

HSP 1 Score: 92.4 bits (228), Expect = 6.070e-18
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 3 
Query:  372 HPKPANLAQGVAHWDPPLAALNEITRDEDKIQGTGLIDSSYHKYGPALGLPALRKALIGKLVQENGLDMTGQE-LMVTAGGNQAFAMVSLALLDPGDRVLLARPFYCAHQCAVQLAGGSLVECGWDPSTLLPDMAQLKREI 791
            HP   +L QGV H+ PP  AL  ++          L     H+Y    GLPAL + +  KL  ENG+ +  ++ ++VTAGGN AF    LAL++PGD V+L  P+Y  H+ AV +AGG  V    D ++  P +  ++  +
Sbjct:   19 HPGTISLGQGVVHYPPPPEALARLSE--------ALAVPERHRYAHVAGLPALLERIRHKLADENGIAVGDEQAVVVTAGGNMAFLQAVLALVEPGDEVILPTPYYFNHEMAVGIAGGRAVLVPTDETSYQPSVEAIRAAL 151
[Close]
BLAST of mRNA_F-serratus_M_contig1063.632.1 vs. uniprot
Match: A0A7S0JI69_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI69_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 1.010e-17
Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 3 
Query:  297 PRLSDRVRNTEPAHIEAVLSRYAGMHPKPANLAQGVAHWDPPLAALNEITRDEDKIQGTGLIDSSYHKYGPALGLPALRKALIGKLVQENGLDMTGQELMVTAGGNQAFAMVSLALLDPGDRVLLARPFYCAHQCAVQLAGGSLVECGWDPST--LLPDMAQLKREIE 794
            P LS R+  T+   I  +     G      +LAQG+ HW PP AAL  +        G  + D     Y    GLP LR+ L  K+  +N  ++T  E+MVTAG NQA+  V LALLD  D  LL RP+Y  H  A+Q+ G +   C   PS   L PD++ L+RE++
Sbjct:    6 PALSARIGLTDTPCIVQMQKMLKGKQ-NILSLAQGIVHWRPPQAALEAV--------GKRVFDHETSLYAADDGLPELRQLLREKMAAQN--ELTQSEVMVTAGANQAYTNVVLALLDAEDPALLFRPYYFNHLMALQMTGSAEHLC-LPPSLADLQPDISALRRELK 161
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1063.632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M1JP84_9CYAN3.650e-1937.50Aspartate aminotransferase n=3 Tax=Planktothricoid... [more]
A0A7S1U2Z5_9STRA2.390e-1841.27Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A522ML19_9BACT4.620e-1840.80Pyridoxal phosphate-dependent aminotransferase n=1... [more]
A0A1V0DJA1_9BACT6.070e-1836.17Aminotransferase n=2 Tax=Bacteroidetes TaxID=976 R... [more]
A0A7S0JI69_9EUKA1.010e-1738.10Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1063contigF-serratus_M_contig1063:169087..173984 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score111.3
Seed ortholog evalue6.3e-22
Seed eggNOG ortholog248742.XP_005652101.1
Hectar predicted targeting categorychloroplast
GOsGO:0000096,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006555,GO:0006558,GO:0006568,GO:0006569,GO:0006570,GO:0006576,GO:0006586,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009641,GO:0009698,GO:0009850,GO:0009851,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010252,GO:0010326,GO:0010364,GO:0010366,GO:0010565,GO:0010600,GO:0010817,GO:0016054,GO:0016740,GO:0016769,GO:0017144,GO:0019222,GO:0019439,GO:0019748,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031335,GO:0031336,GO:0032350,GO:0032351,GO:0032353,GO:0033238,GO:0033239,GO:0034641,GO:0042402,GO:0042430,GO:0042436,GO:0042445,GO:0042446,GO:0042592,GO:0042762,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045763,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046885,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051175,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090354,GO:0090356,GO:0090357,GO:1900908,GO:1900909,GO:1900911,GO:1900912,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901996,GO:1901997,GO:1902221
EggNOG free text desc.Aminotransferase class I and II
EggNOG OGs34K24@3041,37RZD@33090,COG0436@1,KOG0257@2759
Ec32 ortholog descriptionnicotianamide aminotransferase A
Ec32 orthologEc-09_004540.1
COG Functional cat.E
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons3
Model size795
Cds size723
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1063.632.1prot_F-serratus_M_contig1063.632.1Fucus serratus malepolypeptideF-serratus_M_contig1063 169087..173913 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928899.5613902-CDS-F-serratus_M_contig1063:169086..1692091622928899.5613902-CDS-F-serratus_M_contig1063:169086..169209Fucus serratus maleCDSF-serratus_M_contig1063 169087..169209 -
1690962621.5426269-CDS-F-serratus_M_contig1063:169086..1692091690962621.5426269-CDS-F-serratus_M_contig1063:169086..169209Fucus serratus maleCDSF-serratus_M_contig1063 169087..169209 -
1622928899.5763147-CDS-F-serratus_M_contig1063:169689..1697701622928899.5763147-CDS-F-serratus_M_contig1063:169689..169770Fucus serratus maleCDSF-serratus_M_contig1063 169690..169770 -
1690962621.5524323-CDS-F-serratus_M_contig1063:169689..1697701690962621.5524323-CDS-F-serratus_M_contig1063:169689..169770Fucus serratus maleCDSF-serratus_M_contig1063 169690..169770 -
1622928899.5883653-CDS-F-serratus_M_contig1063:173394..1739131622928899.5883653-CDS-F-serratus_M_contig1063:173394..173913Fucus serratus maleCDSF-serratus_M_contig1063 173395..173913 -
1690962621.5644283-CDS-F-serratus_M_contig1063:173394..1739131690962621.5644283-CDS-F-serratus_M_contig1063:173394..173913Fucus serratus maleCDSF-serratus_M_contig1063 173395..173913 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928899.5987816-UTR-F-serratus_M_contig1063:173913..1739841622928899.5987816-UTR-F-serratus_M_contig1063:173913..173984Fucus serratus maleUTRF-serratus_M_contig1063 173914..173984 -
1690962621.588932-UTR-F-serratus_M_contig1063:173913..1739841690962621.588932-UTR-F-serratus_M_contig1063:173913..173984Fucus serratus maleUTRF-serratus_M_contig1063 173914..173984 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1063.632.1

>prot_F-serratus_M_contig1063.632.1 ID=prot_F-serratus_M_contig1063.632.1|Name=mRNA_F-serratus_M_contig1063.632.1|organism=Fucus serratus male|type=polypeptide|length=241bp
MQRIFCLKTLARVCVSLCVIMASYVAAHAASSSTAPKAKSATSTCGTSNS
GSTAAVLGSSVQTRENSAAHTQASRPRLSDRVRNTEPAHIEAVLSRYAGM
HPKPANLAQGVAHWDPPLAALNEITRDEDKIQGTGLIDSSYHKYGPALGL
PALRKALIGKLVQENGLDMTGQELMVTAGGNQAFAMVSLALLDPGDRVLL
ARPFYCAHQCAVQLAGGSLVECGWDPSTLLPDMAQLKREIE
back to top

mRNA from alignment at F-serratus_M_contig1063:169087..173984-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1063.632.1 ID=mRNA_F-serratus_M_contig1063.632.1|Name=mRNA_F-serratus_M_contig1063.632.1|organism=Fucus serratus male|type=mRNA|length=4898bp|location=Sequence derived from alignment at F-serratus_M_contig1063:169087..173984- (Fucus serratus male)
CCGCCTTCCGTCAGCCTTGGCTGCGCATGGATACATTTTGACTGCACACA
TCCTCACTCAAGAACCATTTAATGCAGCGAATATTTTGTCTTAAAACTCT
CGCACGGGTGTGTGTATCGCTTTGTGTCATCATGGCCTCCTACGTTGCGG
CCCATGCGGCGAGCAGTAGCACGGCCCCAAAAGCCAAAAGTGCTACGAGT
ACCTGTGGTACATCCAACTCCGGTTCAACCGCAGCTGTCTTAGGATCTTC
AGTGCAGACAAGGGAAAATTCCGCGGCACATACACAAGCCTCGAGACCAC
GGCTATCGGATCGAGTCCGGAACACCGAGCCAGCACACATAGAGGCCGTT
CTGTCGAGATACGCCGGAATGCACCCAAAGCCTGCCAATCTGGCTCAGGG
CGTTGCTCACTGGGACCCGCCTCTCGCTGCTCTGAACGAGATAACTCGGG
ACGAGGACAAGATACAAGGTACCGGGTTGATTGACTCAAGCTACCACAAG
TATGGACCCGCCCTTGGACTGCCTGCGCTACGGAAGGCGCTTATCGGGAA
GTTGGTGCAAGAGAATGGCCTCGATATGACCGGTCAAGAGGCGAGAAGGG
ATTCAAATAATACTTCTAGTCCACTACTACAAGTAGGTATTACACATGCA
GAGCATAAATTTTAGGGCATGGCTATTTGCCCCACCGGTGGGCCATACCC
AAATTTACCCCACCACCTGTATCTCGCGTCAGAAGGCACGGTTGGTCACA
ATACATGCACGAGTGTGTTGGCGCGTTGCAGGGCTATCATAGGGTCATTC
GTGCAGCCCAAACGGTCCTGTCTACGTGATGTTACGGTCGGTGGGGTGGT
TGGTGTTTTCTGGTATGTAAGGGCAAATAGCCATACATACCAGAAAACAC
CAACCACCCCACCGGCCGTGGTAGCACGTAGACGAGACCGTTTGGGCTGC
ACGATAAACCCGATACTAGCTAACCCTAACCCTAACACACCCATGCAGAT
ACTGTGACCAACCAAGTCTTCTGACGCGAGATCCAGGTGGGGGGGTAAAC
AAGAGAATAGCCCACCGGTGGGCCAAATAGCCATACCCTAAATTTTACGA
TACACCTTGACAAAATCCATGGGTGTGTTAGGGTTAGGGTTAGCTATTAT
CTGGTCTATCGTGCAGCCCAAACGGTCCTGTCTACGTGATGTTACGGCCG
GTGGGGTGGTTGGGGTTTTCTGGTATGAAAGGGCAAATAGCCATACATAC
CAAGAAACCCCAACCACCCCACCGGCCGTGGTAGCACGTAGACAGGACCG
TTTGGGCTGCACGATAGACCAGATAATAGCAACCCTAACACACCCATGCA
TGTACTGTGACCAACCAAGTCTTCTGGCGCGAGATCCAGGTGGGGGGGTA
AACGAGAGAATTGCCCACCGGTGGGCCAAATAGCCATACCCTAAATTTTA
CGATACACCTGACACACGCACTATTAATAGTACCTGGTACCATAAACCGG
AAAAGGCAGCACCCGCCGTTACTCCAACTACCTTGATGGCTACTGGACAT
ATGCCGGCGGACTCTCGGCGGTGCATCGGCACGTATTTGCGTGACCCGAT
AAGCTTGGGGCTGAGCCGATGACGGTTGGCCGTACCGACTTTGATTGGCC
TTTCACCCCTCAACTCAAGTCACCCCCGTATTTCACCACATACACGTGTT
CGGCCCTCCAAATAATGTTGCCGGCTTCGGGTACTAAACAAAGATGGGCT
TGGGAAAGAGAGGCGCATATTAGTTGGTTCATGGTGATCTGCCAAGGCAG
CACTCGTTCGGAACTACCTTGAGGTTTACTGACCCTGTGCGGGCGGACTC
TCGGCAGTGAACACCATCGGTACGCAAAGCTCGGGACTGGCCCGATGACG
TATGCCAGTTTAAAATAAATAATGGACGCCGCCACGGAACTCAGAAGGAA
TCCCGTGAGTACGCACCATGTTCAGCCTGCGTATGGAGATGAGCAGGCTG
GCGCGGGACGGGACTGCCGAAGCCGTCTCGCGCGACCAAATTCTCAGGCG
CGAATGCAGACAGGAAAATGTCATTTTCCCTGTTTAGCTGACCATGAGTA
GGATTGGCAACCTTACCCGGTTGATCCATTACTCTTGCTATATGTGATGA
GGACTATGACCATATATACGTAGGCTGACACCGTGAAGGGAAGGAATCCC
GTGAATAAACGCCATATTCACCCTGGGTGTGGAGAACAAACAGACTGACG
GGGGACGGTATGGTCGAACCTGTCTCACGAGACCAAATTCTTAGGCGCAG
ACGGGGGTTGATAGGGAAAAAAAGGATTGGCAGCCATACCCCGCGGCTGA
TGCCCAGTCTACTGTATACAATGAACGCAACCACACACAACCGCCTGTAG
AGATATCCTACTGCGGTCCTTACGATTACAGTACAGTACAGCACAGTATG
TACCGGATACCTTGTCAGTAAATCATATGCTGATTTTTCAATTATTAGAG
CTAACAGCCGACAGCCGATATTCCCAATTAAACGGCCGGACCCAATTCAA
TTCCCCTGCACGGTGTGTATCCCCGGAAGGTTCATATTTTTTCTATTTAT
AACTTCTTGTGGGCAAAATAACACTGAAGGCTATTCTGATATCTTCGTGA
CACGGCAGATTTCTCTTGAAACTGTCTGTGCGTGATAGACTTGGGCTATT
GTGTTGGCTAAACCGTGAACCGATTGAAACCTTACCTTTCAACTTGACAT
TCCTCGGATGGGGTATGATGGGGTATGATGGGGTATGAAAGAAAACGTAC
CTTCTGTACTTCGCATTCACTCAACAGTAATAATAGTATTTGGGCTCAAA
TGGAATTTCGAAGAACAAGTATGCTTGTGGATCATCATCGAAAAATAAGT
TTTGTACTGTGCATAGAGGGCAGCTCTGCAATGCGTACCTTGCGCACTAT
TTAAGTGGTGGGAATTTGGGATCGCTGCTTAGCTCTATACCTACTTCAAG
AGCACAGTACTACAGTACAAGTAGATAAATCGGCCGTTCGCCCCAGTAGC
TCAGAGGTAACCTCGCGACCTTCTGACACTTTTGGACGTGAGTTCGATTC
CGGTAAACGGGATCTTTCTCACTAAAAATAAATAAATAAAAATAAAAATG
CCCAACAAGTGGAAAATCGTTAGTACACAAAATTCGACTTCACGGTCGAC
GAGGGAAAGGAACGGCTGAATCCTTCTCGCGAGAAAAATAAAGGCACGCA
CCGCAGAAGGAAGGCGGATGAGAAATCCTGTGTGGCCTTCCCCCTATGTG
ACCCCGGCTGGTACATCCAACGAACTTGATATCCAGAATAAATGGGGAGA
AAACACACACACACACACACACACATGCTTTCACTGTCGTCTGTAATCGT
CGCCCGAGTGGTCTAGTAGGTAACCTTGCACACCTGCTAGTAGTGCGGAA
ATCGTGAGTTCAATTCTTGCGAAAATCATAATTTTATAATTTTTAATCCA
TAAGGGGAAGCCTGAGAACGTTAGGAAGTAAAATTCAACTATTAGTTGAC
GAGTTGTAAGAAAGCTGAACTTGCATCGCGATAAAAATCTGTAAGACGAG
AATCGCGGAGAGATGGGAGGATCCTTCGTGACCACAGTAATTGATAGGAT
GGATGATGGCAACGTTGCAACAAGTGGGATTGGTCACCTATTAATAGCAC
GTTGGGCCCCATCGGCCGTAAGTGAGATACAAGCAAACAAACATAACCGC
GTCGATGCCCTACTCAAATACCTACGCTGCTTGGTTGAATCCTCACTTAA
AGCTTATACTTCGTATAAAAAATCCAGCCCGTGGTCACAAGGTAGTTTTG
TGGTTCACTGGAGGGCTCGAAACGTAAAATTCTACAGAACCTTGTACAGG
ACAGGGAGTCTACTCTGGTGTACGAAGCTGCCAGCAAAAAAAGCAAAAAA
TTGTACCAGTACAAGTACACAGTAGTACTTGCGATCACCGAAATAATCGT
GATGGAGTTTTTCTCGTGAGTATTCGACTGTGTTCAGCCGTAATCTCCCG
AAGTAGTTCATTGCAAGCAATCCACTGGCAAGGAATACACTGTATAATAA
CTATAAACTACACACCTGCTACCTGCTTGTACAGTCGACTTCTAGCGCTC
ACACCCTTCATCGCTGAATGATCTACTCTGTCTGATGCACCCTTGTGTGA
TTTGCTTGTTCCAGCTCATGGTTACCGCCGGCGGAAACCAGGCGTTCGCC
ATGGTATCTCTGGCCTTGCTCGATCCCGGAGACAGGGTACTCTTGGTGAG
AAACGCCCTGCACTACGTACGGTAGCCTTATTGATCGTGCATACAGCAGC
ACTGAACTACTGCAGCAGCGTTAGTTGCAGAACCACATTATATGTACCAT
ATTAAATACACCTTCTTACAAAGAGCGACGAGCTAAACCTTAAGCGGAGG
CCTCCCCCTTCAAGAGTCAAGATTTCTTCCCCCTGACTGGGGGATGCTCA
GAAGGTCTAGGTGCGTTCTGTATTTTCTTCAAACAGTACAACACCCGTTA
TATGGGTTTTTGATGCTCTATAACCATAATTATTTGCACGAAACGACATC
AATTGCCCCGCTAATCTGCGTGGTTCGACAACGATTCGTTGGGGGCACTG
AGTCGCGAAAAACTACTCAACACAGAGTCTACCGAGTATCAGCGTCATAA
ACTATTAATAATAGTATTATAATAGCGAAACGCCTTTTCTCGGTTTGTTC
TACTCGCGCGACGGACTGTGCGCAGGCTCGTCCCTTCTACTGCGCTCACC
AGTGCGCTGTGCAGCTCGCCGGCGGGAGCTTGGTGGAGTGCGGGTGGGAC
CCGTCGACACTCTTGCCCGACATGGCTCAGCTCAAGAGGGAGATCGAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1063:169087..173984-

>mRNA_F-serratus_M_contig1063.632.1 ID=mRNA_F-serratus_M_contig1063.632.1|Name=mRNA_F-serratus_M_contig1063.632.1|organism=Fucus serratus male|type=CDS|length=1446bp|location=Sequence derived from alignment at F-serratus_M_contig1063:169087..173984- (Fucus serratus male)
ATGCAGCGAATATTTTGTCTTAAAACTCTCGCACGGGTGTGTGTATCGCT
TTGTGTCATCATGGCCTCCTACGTTGCGGCCCATGCGGCGAGCAGTAGCA
CGGCCCCAAAAGCCAAAAGTGCTACGAGTACCTGTGGTACATCCAACTCC
GGTTCAACCGCAGCTGTCTTAGGATCTTCAGTGCAGACAAGGGAAAATTC
CGCGGCACATACACAAGCCTCGAGACCACGGCTATCGGATCGAGTCCGGA
ACACCGAGCCAGCACACATAGAGGCCGTTCTGTCGAGATACGCCGGAATG
CACCCAAAGCCTGCCAATCTGGCTCAGGGCGTTGCTCACTGGGACCCGCC
TCTCGCTGCTCTGAACGAGATAACTCGGGACGAGGACAAGATACAAGGTA
CCGGGTTGATTGACTCAAGCTACCACAAGTATGGACCCGCCCTTGGACTG
CCTGCGCTACGGAAGGCGCTTATCGGGAAGTTGGTGCAAGAGAATGGCCT
CGATATGACCGGTCAAGAGATGCAGCGAATATTTTGTCTTAAAACTCTCG
CACGGGTGTGTGTATCGCTTTGTGTCATCATGGCCTCCTACGTTGCGGCC
CATGCGGCGAGCAGTAGCACGGCCCCAAAAGCCAAAAGTGCTACGAGTAC
CTGTGGTACATCCAACTCCGGTTCAACCGCAGCTGTCTTAGGATCTTCAG
TGCAGACAAGGGAAAATTCCGCGGCACATACACAAGCCTCGAGACCACGG
CTATCGGATCGAGTCCGGAACACCGAGCCAGCACACATAGAGGCCGTTCT
GTCGAGATACGCCGGAATGCACCCAAAGCCTGCCAATCTGGCTCAGGGCG
TTGCTCACTGGGACCCGCCTCTCGCTGCTCTGAACGAGATAACTCGGGAC
GAGGACAAGATACAAGGTACCGGGTTGATTGACTCAAGCTACCACAAGTA
TGGACCCGCCCTTGGACTGCCTGCGCTACGGAAGGCGCTTATCGGGAAGT
TGGTGCAAGAGAATGGCCTCGATATGACCGGTCAAGAGCTCATGGTTACC
GCCGGCGGAAACCAGGCGTTCGCCATGGTATCTCTGGCCTTGCTCGATCC
CGGAGACAGGGTACTCTTGCTCATGGTTACCGCCGGCGGAAACCAGGCGT
TCGCCATGGTATCTCTGGCCTTGCTCGATCCCGGAGACAGGGTACTCTTG
GCTCGTCCCTTCTACTGCGCTCACCAGTGCGCTGTGCAGCTCGCCGGCGG
GAGCTTGGTGGAGTGCGGGTGGGACCCGTCGACACTCTTGCCCGACATGG
CTCAGCTCAAGAGGGAGATCGAAGCTCGTCCCTTCTACTGCGCTCACCAG
TGCGCTGTGCAGCTCGCCGGCGGGAGCTTGGTGGAGTGCGGGTGGGACCC
GTCGACACTCTTGCCCGACATGGCTCAGCTCAAGAGGGAGATCGAA
back to top