mRNA_F-serratus_M_contig106.595.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A3D2CEL0_9DELT (DUF2237 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D2CEL0_9DELT) HSP 1 Score: 127 bits (319), Expect = 2.270e-35 Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 ALNVLG+PL CS P TGW RDG C TD++DRG+H VC+ +TD+FL ++ ++GNDLSTP+ Y FPGLK GDRWCLC+SRW +A G+APR Sbjct: 4 ALNVLGQPLLPCSFE--PMTGWFRDGCCRTDENDRGRHTVCAVMTDEFLAFSSSRGNDLSTPQPEYGFPGLKAGDRWCLCASRWREAWEVGKAPR 96
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6P0YQW6_9CYAN (DUF2237 domain-containing protein n=1 Tax=Merismopedia sp. SIO2A8 TaxID=2607779 RepID=A0A6P0YQW6_9CYAN) HSP 1 Score: 127 bits (319), Expect = 2.560e-35 Identity = 62/95 (65.26%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 A+NVLG PLQSC P TG+ RDGFC T D G H VC+E+T +FLE+TKAQGNDLSTP Y FPGLKPGDRWCLC+SRW +A AG AP+ Sbjct: 13 AMNVLGTPLQSCCT--NPMTGFYRDGFCRTGGGDMGVHVVCAEMTTEFLEFTKAQGNDLSTPNPMYQFPGLKPGDRWCLCASRWQEAFDAGVAPK 105
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A2H3P4K5_9BACT (Uncharacterized protein n=1 Tax=Longimonas halophila TaxID=1469170 RepID=A0A2H3P4K5_9BACT) HSP 1 Score: 127 bits (319), Expect = 3.160e-35 Identity = 66/109 (60.55%), Postives = 79/109 (72.48%), Query Frame = 1 Query: 1 MSSSATTASGGGA---LNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 MSSS AS G A NVLG PLQ CS P TG+ R GFC+T DRG+H VC+++T +FL +TKAQGNDLSTPR Y FPGL PGDRWCLC++RW +A++AG AP Sbjct: 1 MSSSKAVASNGAAERATNVLGTPLQPCSH--NPETGFYRTGFCTTGPEDRGRHVVCAQMTAEFLSFTKAQGNDLSTPRPAYDFPGLTPGDRWCLCAARWEEARQAGCAP 107
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A524RQ50_9CYAN (DUF2237 domain-containing protein n=2 Tax=Aphanocapsa feldmannii TaxID=192050 RepID=A0A524RQ50_9CYAN) HSP 1 Score: 127 bits (318), Expect = 3.750e-35 Identity = 62/101 (61.39%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 16 TTASGGGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 TT+S ALNVLG+PL C P TGW RDGFC TD DRG H VC +T FL Y+KAQGNDLSTP Y FPGLKPGD WC+C+ RW QA G AP Sbjct: 2 TTSSASAALNVLGEPLDVCGCE--PMTGWHRDGFCRTDPTDRGSHTVCCVMTASFLSYSKAQGNDLSTPMPAYGFPGLKPGDHWCVCAPRWQQALLDGMAP 100
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A0G4EVM9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EVM9_VITBC) HSP 1 Score: 127 bits (318), Expect = 4.100e-35 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 34 GALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315 GA NVLG L+ C P TG+ RDGFC+T D G+H VC++VT +FL YT+AQGNDLSTP P+FPGL+PGDRWCLC+ RW +A RAG AP Sbjct: 7 GAKNVLGGQLECCCTS--PMTGFHRDGFCNTGPMDIGRHVVCAQVTAEFLAYTRAQGNDLSTPHPPHFPGLRPGDRWCLCADRWAEALRAGVAP 98
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: W0DV08_9GAMM (Uncharacterized protein n=1 Tax=Thiomicrospira aerophila AL3 TaxID=717772 RepID=W0DV08_9GAMM) HSP 1 Score: 126 bits (316), Expect = 5.590e-35 Identity = 54/92 (58.70%), Postives = 74/92 (80.43%), Query Frame = 1 Query: 43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 N+LG+PL+ CS P TG+ RDG C TDD DRG+H VC+++TD+FL ++K QGNDLSTP +P+FPG+KPG+ WCLC+ RW++A +AG AP+ Sbjct: 4 NLLGEPLEPCSHM--PLTGFYRDGLCRTDDLDRGRHVVCAQMTDEFLRFSKQQGNDLSTPIHPHFPGVKPGEFWCLCALRWVEAYQAGLAPK 93
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6F8PRE6_9GAMM (Uncharacterized protein n=2 Tax=Thiosulfativibrio zosterae TaxID=2675053 RepID=A0A6F8PRE6_9GAMM) HSP 1 Score: 126 bits (316), Expect = 5.760e-35 Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 1 Query: 40 LNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 LN+ G+PL++CSL P TG+ RDG C TD+HDRG+H VC+ VT++FL +++ QGNDLSTP FPGLKPG+ WCLC+ RWL+A RAG AP+ Sbjct: 4 LNLWGQPLETCSLD--PMTGFYRDGLCRTDEHDRGRHVVCALVTEEFLAFSQRQGNDLSTPIPGMFPGLKPGEYWCLCALRWLEAYRAGVAPK 94
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A1J0PCH5_9SYNE (Uncharacterized protein n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A1J0PCH5_9SYNE) HSP 1 Score: 126 bits (317), Expect = 6.160e-35 Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAPRWCWRA 333 AL+VLG+PL+ CS P TGWRRDG C TD D GQH VC VT++FL Y+++QGNDLSTP Y FPGLKPGD WC+C++RWL+A + G AP C A Sbjct: 17 ALSVLGEPLEICSCQ--PLTGWRRDGRCRTDSSDLGQHTVCCVVTENFLSYSRSQGNDLSTPMPAYGFPGLKPGDHWCVCAARWLEAHQDGVAPPVCLEA 114
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A1G7HDR2_9FLAO (Uncharacterized protein n=1 Tax=Pricia antarctica TaxID=641691 RepID=A0A1G7HDR2_9FLAO) HSP 1 Score: 125 bits (315), Expect = 8.170e-35 Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 NVLG LQSC P TG+ RDGFC T + D G H VC+ +T+DFLEYTKA+GNDLSTPR + FPGLKPGD WCLC SRWL+A++ G+AP+ Sbjct: 7 NVLGTELQSCCTD--PMTGFYRDGFCKTGEQDVGTHVVCAIMTEDFLEYTKAKGNDLSTPRPEWQFPGLKPGDTWCLCVSRWLEAEKEGKAPQ 97
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: UPI00093527BD (DUF2237 domain-containing protein n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00093527BD) HSP 1 Score: 125 bits (315), Expect = 8.680e-35 Identity = 59/94 (62.77%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 A NVLG+PL+ C G P TG+ RDGFC T D G+H VC+E+T++FL++TKAQGNDLSTPR + FPGLKPGDRWCLC+ RW +A AG AP Sbjct: 4 ATNVLGRPLELCC--GAPRTGFYRDGFCHTGPEDVGRHLVCAEMTEEFLDFTKAQGNDLSTPRPEFNFPGLKPGDRWCLCAVRWQEALEAGVAP 95 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig106.595.1 >prot_F-serratus_M_contig106.595.1 ID=prot_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=polypeptide|length=132bp MSSSATTASGGGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHback to top mRNA from alignment at F-serratus_M_contig106:648401..654335- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig106.595.1 ID=mRNA_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=mRNA|length=5935bp|location=Sequence derived from alignment at F-serratus_M_contig106:648401..654335- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig106:648401..654335- >mRNA_F-serratus_M_contig106.595.1 ID=mRNA_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=CDS|length=792bp|location=Sequence derived from alignment at F-serratus_M_contig106:648401..654335- (Fucus serratus male)back to top |