mRNA_F-serratus_M_contig106.595.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig106.595.1
Unique NamemRNA_F-serratus_M_contig106.595.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6H5JIX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX8_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.780e-55
Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 1
Query:   31 GGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            G  LNVLG PL++CSLPGGPTTGWRRDG+CSTDD+DRGQHCVCSEVT +FL+YTKAQGNDLSTP  P+FPGLK GDRWCLCSSRWLQAQRAG+AP
Sbjct:   29 GSPLNVLGTPLKACSLPGGPTTGWRRDGYCSTDDNDRGQHCVCSEVTQEFLDYTKAQGNDLSTPL-PHFPGLKAGDRWCLCSSRWLQAQRAGKAP 122          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: D7FXT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT4_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 4.790e-52
Identity = 75/87 (86.21%), Postives = 83/87 (95.40%), Query Frame = 1
Query:   55 KPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            +PLQ+CSLPGGPTTGWRRDG+CSTDD+DRGQHCVCSEVT +FL+YTKAQGNDLSTP  P+FPGLK GDRWCLCSSRWLQAQRAG+AP
Sbjct:   29 QPLQACSLPGGPTTGWRRDGYCSTDDNDRGQHCVCSEVTQEFLDYTKAQGNDLSTPL-PHFPGLKAGDRWCLCSSRWLQAQRAGKAP 114          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: F6DAF3_THICA (Uncharacterized protein n=2 Tax=Thiomicrospira TaxID=933 RepID=F6DAF3_THICA)

HSP 1 Score: 133 bits (335), Expect = 7.260e-38
Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 1
Query:   43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAPR 318
            N+LG+PLQ+CS    P TG+ RDG C TD+HDRG+H VC+++T+ FL+++KAQGNDLSTP  P+FPGLKPGD WCLC+ RW++A +AG AP+
Sbjct:    4 NLLGEPLQTCSHM--PLTGFYRDGLCRTDEHDRGRHVVCAQMTEHFLDFSKAQGNDLSTPIQPHFPGLKPGDFWCLCALRWIEAYQAGLAPK 93          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A2E7AEX7_9BACT (Uncharacterized protein n=8 Tax=Verrucomicrobiaceae TaxID=203557 RepID=A0A2E7AEX7_9BACT)

HSP 1 Score: 132 bits (333), Expect = 2.160e-37
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 1
Query:   34 GALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            GA NV G+PL  C     P TG+ RDGFC T  HDRG H VC+++T+DFL YT+AQGNDLSTP   Y FPGLKPGDRWCLC++RW +A+RAG AP
Sbjct:   13 GAQNVFGEPLHQCCTS--PLTGFERDGFCHTGPHDRGVHVVCAQMTEDFLAYTRAQGNDLSTPAPMYGFPGLKPGDRWCLCAARWAEAERAGVAP 105          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6P8H973_ACTTE (uncharacterized protein LOC116286862 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H973_ACTTE)

HSP 1 Score: 131 bits (330), Expect = 9.960e-37
Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 1
Query:   43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAPR 318
            NV G PLQ CS    P TGW RDG+C TD +D G H VC+ +T +FL+YTK +GNDLSTP NPYFPGL+PGD WCLC+ RW +AQ AG+AP+
Sbjct:    5 NVFGAPLQPCSTD--PMTGWYRDGYCKTDMNDHGVHTVCANMTREFLQYTKTKGNDLSTP-NPYFPGLRPGDSWCLCALRWKEAQEAGKAPK 93          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A835YP74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP74_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.500e-36
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 1
Query:   25 SGGGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            SG G LNVLG PL+ CS    P TG+ R+GFC  D  DRG H VC+ +TDDFLEYTKAQGNDLSTPR  + FPGLK GD WCLC+SRW QA  AG AP
Sbjct:    7 SGAGDLNVLGSPLKVCSTS--PMTGFYRNGFCQCDGADRGVHSVCAILTDDFLEYTKAQGNDLSTPRPEFGFPGLKAGDGWCLCASRWKQAADAGHAP 102          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A2T2RGJ0_9CYAN (DUF2237 domain-containing protein n=1 Tax=Cyanobacteria bacterium SW_9_44_58 TaxID=1919144 RepID=A0A2T2RGJ0_9CYAN)

HSP 1 Score: 129 bits (324), Expect = 4.080e-36
Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 1
Query:   37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            A NVLG+PLQ C     PTTG+ RDG+C+T   D G H VC+E+T++FLEYTK+QGNDLSTPR  + FPGLKPGDRWCLC+SRW +A++AG AP
Sbjct:    4 AKNVLGEPLQLCC--NNPTTGFYRDGYCNTGGQDFGLHVVCAEMTEEFLEYTKSQGNDLSTPRPMFDFPGLKPGDRWCLCASRWEEARQAGVAP 95          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6T9YYR6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A6T9YYR6_9RHOD)

HSP 1 Score: 130 bits (328), Expect = 4.280e-36
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 1
Query:   43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            NVLG PL  CS    P TGW RDGFC T+  D GQHCVC+ +T  FL+YTK+QGNDLSTPR   FPGLKPGD+WCLC+SRW QA  AG AP
Sbjct:   61 NVLGTPLSLCSSD--PLTGWNRDGFCCTEVADFGQHCVCASLTKSFLDYTKSQGNDLSTPRGS-FPGLKPGDKWCLCTSRWKQAHAAGCAP 148          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: UPI00200477EA (DUF2237 domain-containing protein n=1 Tax=Lysobacter sp. CAU 1642 TaxID=2933270 RepID=UPI00200477EA)

HSP 1 Score: 127 bits (320), Expect = 1.420e-35
Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1
Query:   37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAPR 318
            ALNVLG PLQ CSL   P TGW RDG C +D HD G H VC+ +T +FLE+++  GNDLSTPR  + FPGLKPGDRWCLC+ RW +A  AG APR
Sbjct:    3 ALNVLGTPLQPCSLD--PLTGWFRDGCCRSDPHDAGMHWVCAVMTSEFLEFSRQAGNDLSTPRPEFAFPGLKPGDRWCLCARRWQEAYVAGAAPR 95          
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A368CLR9_9SYNE (DUF2237 domain-containing protein n=1 Tax=Synechococcus sp. MED-G71 TaxID=2267256 RepID=A0A368CLR9_9SYNE)

HSP 1 Score: 128 bits (321), Expect = 1.620e-35
Identity = 59/93 (63.44%), Postives = 67/93 (72.04%), Query Frame = 1
Query:   40 LNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315
            LNVLG PLQ C     P TGW RDGFC TDD DRG H VC  V++ FL Y+KAQGNDLSTP   + FPGLKPGD WC+C++RWL+A   G AP
Sbjct:    9 LNVLGTPLQRCGCE--PMTGWYRDGFCRTDDADRGSHTVCCVVSESFLSYSKAQGNDLSTPMPQFQFPGLKPGDHWCVCAARWLEAHADGMAP 99          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIX8_9PHAE2.780e-5584.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXT4_ECTSI4.790e-5286.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F6DAF3_THICA7.260e-3861.96Uncharacterized protein n=2 Tax=Thiomicrospira Tax... [more]
A0A2E7AEX7_9BACT2.160e-3764.21Uncharacterized protein n=8 Tax=Verrucomicrobiacea... [more]
A0A6P8H973_ACTTE9.960e-3763.04uncharacterized protein LOC116286862 n=1 Tax=Actin... [more]
A0A835YP74_9STRA2.500e-3666.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2T2RGJ0_9CYAN4.080e-3664.89DUF2237 domain-containing protein n=1 Tax=Cyanobac... [more]
A0A6T9YYR6_9RHOD4.280e-3667.03Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
UPI00200477EA1.420e-3563.16DUF2237 domain-containing protein n=1 Tax=Lysobact... [more]
A0A368CLR9_9SYNE1.620e-3563.44DUF2237 domain-containing protein n=1 Tax=Synechoc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig106contigF-serratus_M_contig106:648401..654335 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.2
Seed ortholog evalue1.6e-40
Seed eggNOG ortholog2880.D7FXT4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Uncharacterized protein conserved in bacteria (DUF2237)
EggNOG OGs2S415@2759,COG3651@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size398
Cds size396
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig106.595.1prot_F-serratus_M_contig106.595.1Fucus serratus malepolypeptideF-serratus_M_contig106 648401..654335 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928893.8187106-CDS-F-serratus_M_contig106:648400..6485331622928893.8187106-CDS-F-serratus_M_contig106:648400..648533Fucus serratus maleCDSF-serratus_M_contig106 648401..648533 -
1690962618.958659-CDS-F-serratus_M_contig106:648400..6485331690962618.958659-CDS-F-serratus_M_contig106:648400..648533Fucus serratus maleCDSF-serratus_M_contig106 648401..648533 -
1622928893.834697-CDS-F-serratus_M_contig106:649200..6493971622928893.834697-CDS-F-serratus_M_contig106:649200..649397Fucus serratus maleCDSF-serratus_M_contig106 649201..649397 -
1690962618.9682486-CDS-F-serratus_M_contig106:649200..6493971690962618.9682486-CDS-F-serratus_M_contig106:649200..649397Fucus serratus maleCDSF-serratus_M_contig106 649201..649397 -
1622928893.8553321-CDS-F-serratus_M_contig106:654269..6543351622928893.8553321-CDS-F-serratus_M_contig106:654269..654335Fucus serratus maleCDSF-serratus_M_contig106 654270..654335 -
1690962618.9761639-CDS-F-serratus_M_contig106:654269..6543351690962618.9761639-CDS-F-serratus_M_contig106:654269..654335Fucus serratus maleCDSF-serratus_M_contig106 654270..654335 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig106.595.1

>prot_F-serratus_M_contig106.595.1 ID=prot_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=polypeptide|length=132bp
MSSSATTASGGGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQH
CVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQR
AGRAPRWCWRAPTGKRWKWSPSSCSWSTAPTP
back to top

mRNA from alignment at F-serratus_M_contig106:648401..654335-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig106.595.1 ID=mRNA_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=mRNA|length=5935bp|location=Sequence derived from alignment at F-serratus_M_contig106:648401..654335- (Fucus serratus male)
ATGTCGTCTAGCGCTACGACAGCTTCCGGAGGAGGGGCACTGAACGTGCT GGGCAAACCCCTACAGGTGCGTGTAGAGCTCTACGCAAAGCTGACCGCGA CCAAACGAGAGCACAGCATATATGTTTGCCACGCACCCGTAGGCAGTAGG AAGACGTTACCACATGTACAGCGTCGCGCCGACCTAATTGGATAATCTGT TCTGCACAAAAGCAGAAGACCTCCACAACTACGTAGTCACGACACTAAGG CCGCTGCAACGCTACACCCTGTCCCGCCCATCTTCTATTCGATGCGGCGT CCACTTTCTACTGTTTTGGTTAGTACCGCTGGACTTCCAACTAGTCTTTA GTCTTTACTCGTTCGTATCTAAACCTTCTTCTGAGTATCCACCCCAGTCA GAGGGGAAAATTCTGAACACGTTGATTCAGAAGGTCTAGGTGCGTTCTGT ATTTTCTTCAAACATCAGTTGTTTGTGTTGTGTCCAGGACGAGACGAATC TGCGTCTCGATCCGTCGCACGCTCGAATTTTGGGTCGTCGGAATTGCAAC GAGACCTTGGCCTGTTTACGCTGCAGCACAGCAGGCTCGAAACAAACATG CAGTAGTAGTAGAACTTTGTTCCGCTGTACATATCTTCTGCCGCAGCAGC AGCAGCAGTTGTATGATGACTCATACACACATATGCAAGTACTTCCTTGT TCAAGTAGTTGGATACATGTATACTGGTATACAGCACTACTGCTGTACAT GTAGACTAGTATCCGGAGGACACCGCAACTTCGGGTTCCGCTTTTTTTTG CAGGTCACATGCGTTGGAGCTCTAATCGGAAGACAACCAGTATGTGTGTA TGTACATGTATGTATGGTTATCACAAACCATGAGCAAGATCGGGCATCAA CCGGTGGTTGCTTGCCCAGTCCTGCTCGTGGTCAACTAGCCTATTATTAG CTTAAGGCCACTTCTTATGTTGTTAGAAAAATGTTATCAGAAAACGCGTT TTCTGATAACCGTTTTTCTAACAGGATTTTTCCAAAGACCCGTTCTTATC TTGCAGCTTGTCAAAATATAAAAGGGCAATATAAAAGTAGTTATCACCGG CCTTTTACTAGGAGGCGTCTGCACGTTTGGAGAGTCTGTCGAATGTGTTG ACAGTCTGCTGTATGTTTTGTGTTGTCACGAACAACACGTACGTCGCGAA GGACTACTGCATGTAGACTCATTGCCTAGCTTGTGCACCTACTTCTAACC GTGGCGTAGTACAGTACGTGATCTTCGATCGTTTCGGACGTGCGCAACCA CACAAATGCATCTCGAAGGCCGCAACGTGCCATGCAAACTGTGAAAAATC AGAACCCGCCTAGACCTTTTTTTGTACTGCAAGCGGCCTCTAAAAACATA GTCTATAATCTGTACGGAGAACGTAACTGCTGTATGATGCACATTGCAGA GGCTACAGATGTGTTCTCGAGCCATGATTGCACCTTCCACGTGGAACGAG TGGCAACTGATTACCATTTTTTATCCTCTGCTTGCGGCGTCAATATGCTG CCACCGTGGCCGTCACCGCTGCGACACAGTAATCCATGCGAGTCTCCAAC CTACACGAGGTCTGTCTTTGAAGGCGAATTTGATTTTTTGCGTCTGTCCG TTCCGAGGCACGCCCACAACACATAGCGAAGGACTGCTGCTGCGGGTAGG CGTATTACCTTGTACACCTACTTACAACCGTGGCATGGTTCAGCACGTGG TCTTCAATCGTTTGGGGCTTGCACAGCCACACGAATGCAGCTCGAAGGCC GCAATGTTCCATGCAACTAGTACTGCTGTGCAAGCGACCTCCAATTACAG CATCAAACAGCATCTAAAACAGCATACATAATAATCTGTACAGAGGAGGT AAAGCTGCACGACGCACGCTGCAAAGGCTTCAGACAAATATTTTCTCGGG GAACGACTGCGTCTTCCTCGTCGAGTAACCCCAGAACAAGTGCCAACTGA TTGATATTTTTTATTCTCTGCTTGGGTTGGGCGTCGATATATATCTGCTA TCGCGGCTGTCACCGCTGCAACTTATCAGCCGTTGAGAATTCAAACCCTA GCCGTTGGGAATTCAAACCCATTTCTGATAAGATTTTTAATAAGTGCATC CTGTTAGAAAATCCTGATTTTCTAACAGGATGAGGTTATCAGAAAATTTT ATCAGAAAACATCTTGTTAGAAAACGCCTTTTCTGATAACGTAAGAAGCG GATTTTTGGTCTCTTATCAGAAATGGCGTTTTCTGATAAGATTTTCTAAC AACATAAGAAGTGGTCTAACCGGGGAACTTACTTTTCTCCTGTACCCGTT CGCGCGCAAAAAAAAATTGAGCCCGCGAGACAGTTTTGGCCGTCCCGTCC CGCACTATTAATATTAATAGCCCGCTTCGCTCCTTCTCCACACCCAGACT GAATCGGGTGCTTAGACTACATAAGCCCGAGTGGTCTATTAATATAATAG TAGGTAACCTGCATACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTAG CTTAAGCAGAATTTGTGTTCTTTCTTTTGTAACGGAAAGCGTGGGAACGT GAGTAAGTAAAATTCAACCATTGGTTGACGAGTTGTAAGAGTGCTGAACT TGCATCGCGATAAAAAAAATGTAAGGCGTGAACCGGGGAGGGATGGGAAG ATCCTTTGTGACCACAGGCAGGATGGTAATTAGAGGTCCATCGGCTATAA GTGTGATTAAAAAAATAAAGAAAAAAAACTACATGCGTACCGCCAACCGC CATTGGGTCAGTCCCGAGTCTATCGAGTCACTCAATTACGTAAAATGCCG ATGACGTTCACCGCCAGGAGTCCGCCAGCACAGGGGTAGCAGTCCCCAAG GTGGTTCGAGTAACGGGTGTGCTGTGCACACTTATAGCCGATGGACCTCT AATTACCATCCTGCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGT TCACGCCTTGCAATTTTTTATCGCGATGCAAGTTCAGCACTCTTACAACT CGTCAACCAATGGTTGAATTTTACTTACTCACGTTCCCACGCTTTCCGTT ACGAAAGAAAGAACACAAATTCTGCTTAAGCTAAGAATCGAACTCACGAC TTCCGCACTAGCAGGTATGCAGGTTACCTACTAGACCACTCGGGCGACGA AATCACGAAACTATTGTACGACGGCACACGGCACAGCTGTCAGCATTTGT CATGTTTGACGTGTTTCTCGACTGTGGGCACCTCTAAACTCTCCCTGCTG TTGTAGTCTACCAGTAGTATATAATACGGTTTAAAAGCGGTACAAATCAA TAAATATTAACGGTTTGAGTCGCTTCCCACACTGTCCGACTATTTCTACT GCCGCTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCACACCTGCTACTG TAGTGCGGAAGTCGTGAGTTCGATTCTTAGCTTAAGCAGAATTTGTGTTC TTTCTTTCGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAGCCA TTGGCTGACGAGTTGTAAGAGTGATGAACTTGCATCGCGATAAAAATTGC AAGGCGTGAACCGGGGAGAGATGGGCAGATCCTTTGTGACCACAGGCAGG ATGGTAATTAGAGAGGTCCATCGGCTTATAAGTGTGATAAAATAAAATAA AATAAATCATTGGTTGACGAGTTGTAAGATTGCTGAACTTGCATATCGCA ATAAAAAATATTTGGTACATGAGTAGGTAGCTGCTCTAAGGTGTCAACCG GGAAGAGAGATGGCAACGTTGAGGCCCCGGCTAGGAGTTTTTGAGTGAGG AAAGAAAAATAAAAAGAAGTGGACTTGAGTGGAGTTAGTTAATTCGCACC TTCATTACCTACTGGTATAACAGACTGAAACGGCGAAACGGCCCTCCCAA AATCGCGTGTACAGCAGTACTCGTGTCGCGAGTAGGGTCTAGAAAAAGAG GAGCCGTCTCCCAACACATCACATTTACCGCATAATACATGTAATACACC CAGACAGTACCTACTCTACGGGAGAGTAGTTCTGCTACCACAACCACCCT CTATTCTCGGTGTGTTCTCGGCCTCAGCCCTGGTTTTAAAGATTCGATTC AATATCTACTCCCGACGGGGCTCGTACCTTGCTTTGCCTTGGCTCACAGA CCACACATGGGCTCTACCAAGGTACAGTACGAGGCTTTTTAGCCGGCGCG GCGTTGCCTGTCGCTGGCAGGCGTGGTTTCGACGGGCATAGAGGGACCAA CCTTACAAGAACAAAAAGCCATCAAGCTGAGATGTTTTGGTGTGCCACCT TACAATACACGAGAAAAAATGTGTGTGATTTTTTTTAACATTGCGCGGCC TCCAAAAATCGAAACACGTGTTACGGCGGAGGATATAGACGTTTGCTCTC GTGCGGCGCGACTCCGCACCTTCTGCATACCTCCCGTAATAGTTACATTC ATAGACTACTTACATTACGGTTACATTTCCATACCCAATCTAGACTGGAA GATTTTAAATCTGAATAGCCACCTCTTGAGATTGTGAAATACAGTTTGAC GTTCCTTCCTCCCCCAACCACCCCCCCCCACCCCCCGCCCCCCTGTGCAC GCTTTCGGTACATCAAATCAGTACAATATGCCCCTGCGCCCTTAGTCAAG ATCAGCTCGACTCACACTCGAGTGACTTCAGGAATGCAGTATATATTGGT TATGTATATCGCCGTCCGCGTGGAGCGAACATTGGAACTCCCGCGGTATG ACATTTAAGCCACCCCCCCCCCCAAAGTATGACGTCATCCTGGCAACCGT TTGTTGCGATCCACTCCGTTCTATGGCCCCCTTCGAATAAACACTCCCGT GTTGACTTGACGTCATTCTACGCCTCATACGACGCCAGTCTTGCTCGCTG CCTGGAGGGCCGACGACCGGCTGGCGACGAGACGGCTTCTGCAGCACCGA CGATCACGATCGTGGTCAACACTGCGTCTGCTCGGAGGTGACGGACGATT TTCTGGAGTACACCAAAGCCCAGGGTAACGACCTCTCCACACCGCGGAAC CCCTACTTCCCAGGCCTCAAGCCGGGAGATCGATGGTGGGTAGTGGGCAT CCCCCCCCTCTTCTGAATCAGAAATCTTTCCGTTTTTTTCTTCTCTAACA TCCCGATCACGTTTCTCTCTGTTTTGATCGCTATTTCATATGAGGACACT CACGTTTCGTATGAAAGTACAGTTGAGCGAGTTGATCAACCAGCCAGCCT CCGCCCGCTGGAGAGGAAATTTGGTCGTTCTTAACATTGTTTTTTTTTTT TTAATGTTTTGTTGTTGTGAATTCTGATTTTGGAGTTTTGTATTAGTGTT TTTTTTTAATGTTTTGTTGTGCTTTGTTGTGTTTTGGCTCTTCTTCTTTT TCTCGGTCTTTGGCAAGGAGGTTTCGGTCAATGGTACGTCTTTTTCCTTG CTGACGCTTCCCTTCCCTTCCCTTCCCTTCCCTTAACTCTGGGTCCGCTT TTCTGTCTTGCTGGCCCTTCGATGACTGCTCGCGCGCTAGGCCCGTTTAG TTGTTGCTGTTGCTGCAGCTGCTATTGTTCTTCTATTCTGAATATAGAGG TACCTGTCAAGAACACAATAAGCACGCTGACAGGACGCCAATACCTGAAA TACCGACGTACATCCGAATGCCTAAAATGTCCCTCCTTGGTTGACTTCAC GGCTGGTAGCTGTCAACGTGCTCAACGTGCTCAACGTGCTCGCCTCGACC AGGTGTCTTTGTTCGTCGCGGTGGCTGCAGGCGCAGCGCGCTGGGAGAGC TCCCCGGTGGTGTTGGAGAGCACCCACCGGAAAGCGCTGGAAGTGGTCCC CCTCGAGCTGCTCATGGAGCACAGCTCCAACCCCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig106:648401..654335-

>mRNA_F-serratus_M_contig106.595.1 ID=mRNA_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=CDS|length=792bp|location=Sequence derived from alignment at F-serratus_M_contig106:648401..654335- (Fucus serratus male)
ATGTCGTCTAGCGCTACGACAGCTTCCGGAGGAGGGGCACTGAACGTGCT
GGGCAAACCCCTACAGATGTCGTCTAGCGCTACGACAGCTTCCGGAGGAG
GGGCACTGAACGTGCTGGGCAAACCCCTACAGTCTTGCTCGCTGCCTGGA
GGGCCGACGACCGGCTGGCGACGAGACGGCTTCTGCAGCACCGACGATCA
CGATCGTGGTCAACACTGCGTCTGCTCGGAGGTGACGGACGATTTTCTGG
AGTACACCAAAGCCCAGGGTAACGACCTCTCCACACCGCGGAACCCCTAC
TTCCCAGGCCTCAAGCCGGGAGATCGATGTCTTGCTCGCTGCCTGGAGGG
CCGACGACCGGCTGGCGACGAGACGGCTTCTGCAGCACCGACGATCACGA
TCGTGGTCAACACTGCGTCTGCTCGGAGGTGACGGACGATTTTCTGGAGT
ACACCAAAGCCCAGGGTAACGACCTCTCCACACCGCGGAACCCCTACTTC
CCAGGCCTCAAGCCGGGAGATCGATGGTGTCTTTGTTCGTCGCGGTGGCT
GCAGGCGCAGCGCGCTGGGAGAGCTCCCCGGTGGTGTTGGAGAGCACCCA
CCGGAAAGCGCTGGAAGTGGTCCCCCTCGAGCTGCTCATGGAGCACAGCT
CCAACCCCGGTGTCTTTGTTCGTCGCGGTGGCTGCAGGCGCAGCGCGCTG
GGAGAGCTCCCCGGTGGTGTTGGAGAGCACCCACCGGAAAGCGCTGGAAG
TGGTCCCCCTCGAGCTGCTCATGGAGCACAGCTCCAACCCCG
back to top