mRNA_F-serratus_M_contig1058.580.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1058.580.1 vs. uniprot
Match: UPI001CF29BBA (uncharacterized protein LOC114969674 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF29BBA) HSP 1 Score: 115 bits (288), Expect = 5.980e-26 Identity = 78/229 (34.06%), Postives = 123/229 (53.71%), Query Frame = 1 Query: 13 RKTTMDRATSILFTLVILRTGMQLNLASVLFGLSASTAGRVFVTWLCLLHSV-HFPMIRMPTWKEVVDGCPSSVREQGMGEVAVMIDCTEFSTERMWLEDAVHYFFSTYKQRPTAKFVVGITTSGAFCYVSEGYGGRMTDNAVVRKSGLLEVLREQKYPKGAEVLADRGFQGLERDLV-KIGMYLSTPPSSRGRLDETRFSQEDAEFATEAANVRIHVERAIGGLKEWK 693 RK T + TLV LR G+ NL S LFG+S ++ + F TW+C L + ++ P+ +++ P S ++ V ++IDCTE E+ A +S YKQ T K +VGI+ G F +VS+ + G +D + ++SGLL++L G ++AD+GF RDL K + L+ PP +G+ + S + + + A+VRIHVERAI LK ++ Sbjct: 253 RKRTFSPFEEFILTLVRLRLGLLTNLLSDLFGISTASVSKTFRTWICFLGKILKDTLLIWPSKQQISSNLPKSFKK--FPSVRIIIDCTEIYIEKPTTPSAQRATWSNYKQHNTIKALVGISRDGMFTFVSKLWTGNSSDRHITQQSGLLDLLES-----GDSIMADKGFN--IRDLATKKRVLLNVPPLCKGK----QLSTKAVKTTRQIASVRIHVERAIERLKNFR 468
BLAST of mRNA_F-serratus_M_contig1058.580.1 vs. uniprot
Match: UPI00148ACDDB (uncharacterized protein LOC117689614 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148ACDDB) HSP 1 Score: 115 bits (289), Expect = 6.410e-26 Identity = 83/257 (32.30%), Postives = 135/257 (52.53%), Query Frame = 1 Query: 25 MDRATSILFTLVILRTGMQLNLASVLFGLSASTAGRVFVTWLCLLHSVHFPMIRMPT---WKEVVDGCPSSVREQGMGEVAVMIDCTEFSTERMWLEDAVHYFFSTYKQRPTAKFVVGITTSGAFCYVSEGYGGRMTDNAVVRKSGLLEVLREQKYPKGAEVLADRGFQGLERDLV-KIGMYLSTPPSSR----GRLDETRFSQEDAEFATEAANVRIHVERAIGGLKEWKYVVQPVAWDGLDLIETAVQLCAALTN 771 + R L TL+ LR + + + +FG+S + ++FVTW+ ++ V P+++ P+ K+ + C SV + +IDCTEF ER A +S+YKQ+ T K +V +T SGAF ++S +GG ++D + G L++++ G EV+ADRGF L RDL+ + L+ PP ++ G+ + D + A +RIHVERAIG LK +K + + L V++CA L+N Sbjct: 287 LTRFHEFLITLLRLRLALPTFVIADIFGISCTRVSQIFVTWINYMNVVFSPLLKRPSAKCMKKFLPKCFKSV----FPKTTCIIDCTEFFIERPSTPTAQSRTYSSYKQKNTFKALVAVTPSGAFMFISNLWGGNVSDRYITEHCGFLDIVKP-----GDEVMADRGF--LIRDLLLERRATLNIPPFTKKCSWGK--GKHLTAHDVLKTKKIAKLRIHVERAIGRLKNYKILSHTIPLKIKPLCNQIVKVCAFLSN 530
BLAST of mRNA_F-serratus_M_contig1058.580.1 vs. uniprot
Match: UPI00148AC44B (uncharacterized protein LOC105344497 isoform X1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AC44B) HSP 1 Score: 110 bits (276), Expect = 1.380e-25 Identity = 78/257 (30.35%), Postives = 128/257 (49.81%), Query Frame = 1 Query: 1 SRRKRKTTMDRATSILFTLVILRTGMQLNLASVLFGLSASTAGRVFVTWLCLLHSVHFPMIRMPTWKEVVDGCPSSVREQGMGEVAVMIDCTEFSTERMWLEDAVHYFFSTYKQRPTAKFVVGITTSGAFCYVSEGYGGRMTDNAVVRKSGLLEVLREQKYPKGAEVLADRGFQGLERDLVKIGMYLSTPPSSRGRLDETRFSQEDAEFATEAANVRIHVERAIGGLKEWKYVVQPVAWDGLDLIETAVQLCAALTN 771 +R +R +D L T++ L+ G+ + + FG+S + F TW+CLL+ + P+ PS + + V++DCTE +R + FS YK T KF+VGIT G +VSEG+GGR++D ++ ++ LL+++ E G V+AD+GF ++ L K G L+ PP R +F+ ++ E A +RIHVERAIG +K + ++ + L +C +TN Sbjct: 15 TRSRRCMALDPIDQFLATMMRLKVGLYVQDMAERFGVSVGAFSQYFSTWVCLLYKELKELNPFPSRDVSQRNIPSCFKS--FPSLRVILDCTEIFIQRSSSLVNQNQSFSNYKHHTTLKFLVGITPFGVISFVSEGFGGRVSDRQMIERTCLLDLIEE-----GDGVMADKGFT-IKDMLEKKGSTLNIPPF---RSSSNQFTTQEVLDTQEIAKLRIHVERAIGRVKNFHIFDGVLSLSLVPLSSQMFSVCCWITN 260
BLAST of mRNA_F-serratus_M_contig1058.580.1 vs. uniprot
Match: A0A2B4S2B2_STYPI (THAP-type domain-containing protein n=2 Tax=Astrocoeniina TaxID=123757 RepID=A0A2B4S2B2_STYPI) HSP 1 Score: 114 bits (285), Expect = 2.110e-25 Identity = 84/245 (34.29%), Postives = 128/245 (52.24%), Query Frame = 1 Query: 43 ILFTLVILRTGMQLNLASVLFGLSASTAGRVFVTWLCLLHSV-HFPMIRMPTWKEVVDGCPSSVREQGMGEVAVMIDCTEFSTERMWLEDAVHYFFSTYKQRPTAKFVVGITTSGAFCYVSEGYGGRMTDNAVVRKSGLLEVLREQKYPKGAEVLADRGFQGLERDLVKIGMYLSTPP-SSRGRLDETRFSQEDAEFATEAANVRIHVERAIGGLKEWKYVVQPVAWDGLDLIETAVQLCAALTN 771 ++ TLV LR G+ + +F +S S R+F TW+C L +V ++ P+ +EV P S + V+IDCTE E+ A +S YK T K +VGIT SG F ++S+ + G +D + ++SGL ++L E G V+ADRGF + L K +YL+ PP S +G+ + S+ +F + A VRIHVERAI LK++K + L + + +C AL N Sbjct: 286 LIVTLVRLRLGLMGRQLADIFSVSQSQLSRIFTTWVCFLATVLKEVLVLWPSQEEVKGNLPRSFSKYP--NTRVIIDCTEMYIEKPTSPYAQRATWSEYKGHNTIKALVGITPSGYFSFLSKFWTGSTSDRKITQESGLKDLLEE-----GDSVMADRGFN-IRDILTKRKVYLNIPPFSKKGK----QLSRAATKFTRQIARVRIHVERAIERLKDFKIFQGNLPLTLAPLADQMLIVCGALCN 518
BLAST of mRNA_F-serratus_M_contig1058.580.1 vs. uniprot
Match: A0A8D8VWA9_9HEMI (Hypothetical protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8VWA9_9HEMI) HSP 1 Score: 110 bits (275), Expect = 2.520e-25 Identity = 73/227 (32.16%), Postives = 121/227 (53.30%), Query Frame = 1 Query: 103 FGLSASTAGRVFVTWLCLLHSVHFPMIRMPTWKEVVDGCPSSVREQGMGEVAVMIDCTEFSTERMWLEDAVHYF--FSTYKQRPTAKFVVGITTSGAFCYVSEGYGGRMTDNAVVRKSGLLEVLREQKYPKGAEVLADRGFQGLERDLVKIGMYLSTPPSSRGRLDETRFSQEDAEFATEAANVRIHVERAIGGLKEWKYVVQPVAWDG--LDLIETAVQLCAALTN 771 F LS + G +F L + I P+ +V P R + +V +IDC E ++ +++H +S YK+ T K+++ T G C++SEG+GGR +D+ +++KSG L+++ G +++ADRGF+ +E+D+ + G L PPS G ET FS+ DA + A +RIHVER IG L+ + + V D + L++ ++ ALTN Sbjct: 59 FDLSPTYLGTIFRNVLPRVAECLEKFIFWPSKSQVFLNLPIPFRAR-FSKVVAIIDCFELEIQKP--SNSLHQAMTWSAYKKCNTLKYLIACTPDGTCCFISEGWGGRTSDSVILKKSGFLDLIEP-----GVQIMADRGFKHVEKDIAEKGAMLVRPPSVVGT--ET-FSKADARLTKQIAALRIHVERVIGRLRNFNILTPHVCLDNKLVPLVDAITKVVCALTN 274 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1058.580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1058.580.1 >prot_F-serratus_M_contig1058.580.1 ID=prot_F-serratus_M_contig1058.580.1|Name=mRNA_F-serratus_M_contig1058.580.1|organism=Fucus serratus male|type=polypeptide|length=249bp MDRATSILFTLVILRTGMQLNLASVLFGLSASTAGRVFVTWLCLLHSVHFback to top mRNA from alignment at F-serratus_M_contig1058:64837..65607- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1058.580.1 ID=mRNA_F-serratus_M_contig1058.580.1|Name=mRNA_F-serratus_M_contig1058.580.1|organism=Fucus serratus male|type=mRNA|length=771bp|location=Sequence derived from alignment at F-serratus_M_contig1058:64837..65607- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1058:64837..65607- >mRNA_F-serratus_M_contig1058.580.1 ID=mRNA_F-serratus_M_contig1058.580.1|Name=mRNA_F-serratus_M_contig1058.580.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig1058:64837..65607- (Fucus serratus male)back to top |