mRNA_F-serratus_M_contig1056.572.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1056.572.1 vs. uniprot
Match: A0A7S2UAP0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAP0_9STRA) HSP 1 Score: 219 bits (559), Expect = 3.730e-54 Identity = 147/380 (38.68%), Postives = 205/380 (53.95%), Query Frame = 1 Query: 2092 PFALLSPEKLASYDVVLTTFDVLRAEVHHAESKFANQDGLSGPVMSLRKRKKYRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMTLKIPATHRRVIFVWCVTGTPLGKGSIDDIFGLLVFLKASPLDSKAVWTSAIREPIDQRLPGAMERLTWALKHVMWRVTKA--SVSAQIDIPQQTCVDRRLSFSSVEAHFYQKQ--HRAAADDARRLLTATAKGGRGVEEKLFKALLKLRQACCHPCIGSGGLGGPSGGQKLGGGSXXXXXXSSSRGGQRWLLTMDQVLDSLIDEERLKAEEEQRKVILNLNASGAVARLVLRAKERTRDSGDGPMDSAIVRETPGSLLRDSISCYERALKMAHDNRTPGLVTGGADLTGSRGL 3219 PF L P+ LA DVVLTTF VL ++ H++ N P LRKRK YR++PSPL ++ WWR+ +DEA VE+TT +++M L + + R WCVTGTP+G+G +DD++GLL+FLK P K + ++ + R GA++R LK + WR TKA SV Q+ IP+Q L FSSVE HFYQ+Q A DA + + E L L LR ACCHP +GS G K + RGG +LTMDQ+LD LID+ + K EE QR V+L+ NA ++A+L + A S + +++ L+R S + Y +AL +A +N +P LV G L+G G Sbjct: 726 PFQLAIPKYLADADVVLTTFQVLMTDLGHSKD---NPYASGSPTRRLRKRKSYRIVPSPLTSIFWWRICLDEAQRVETTTAASSRMALYLESRFR-----WCVTGTPIGRGKVDDLYGLLLFLKLVPFADKRWFKHCLK--LCHR--GALDRTQIMLKEIFWRSTKANHSVRQQMGIPEQVEKKIMLKFSSVERHFYQQQLEKTIVAADAVAGEKNSYRSNTKNEAMLSHHLHCLRAACCHPQVGSNHSFGRV---KKNSSRSVGRSRLNGRGGVSSVLTMDQILDRLIDDAKGKCEEAQRVVLLHTNALASMAKLKVEAMRFGLIS--------LEQQSEEDLIRQSRTFYTQALDLAEENSSPTLVAGEGILSGCSGF 1082
BLAST of mRNA_F-serratus_M_contig1056.572.1 vs. uniprot
Match: A0A0U9HIZ5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIZ5_KLENI) HSP 1 Score: 220 bits (560), Expect = 1.500e-53 Identity = 364/1515 (24.03%), Postives = 542/1515 (35.78%), Query Frame = 1 Query: 2098 ALLSPEKLASYDVVLTTFDVLRAEVHHAESKFANQDGLSGPVMSLRKRKKYRVIPSPLPALKWWRVVIDEAHMVESTTQETAKMTLKIPATHRRVIFVWCVTGTPLGKGSIDDIFGLLVFLKASPLDSKAVWTSAIREPIDQRLPGAMERLTWALKHVMWRVTKASVSAQIDIP-QQTCVDRRLSFSSVEAHFYQKQHRAAADDARRLL------------------TATAKGG---------------------------RGVE---------------------EKLFKALLKLRQACCHPCIGSGGLGGPSGGQKLGGGSXXXXXXSSSRGGQRWLLTMDQVLDSLIDEERLKAEEEQRKVILNLNASGAVARLVLRAKERTRDSGDGPMDSAIVRETPGSLLRDSISCYERALKMAHDNRTPGLVTGGADLTGSRGLLPWSDPSAARRATAPIDGADAAPGEAGGDSSAPAPPEPVSGPSALPLHSQRNAHTSYVETRRPFALAWRVVAGSAIDDAFGKANPESNNSNGSKGVSEKK---DDEKATATALSGGGACRPRDPTWARFIFAERKRILQIRVRCCHSHARHRPTSSVVGDDVETEAGNGVAHEEAYTVGRDG------LDPVCFPQQCVLQVGHHHDWSGFRRRTSPVPPLQKACASSGLWEAPTALGKSTHTDTNTHTRGKLKCKIFCTRTLPRAHSSLTTCRRKAASQPGTFADVVRFSLKAPEPSLAHPPPAAEVKDPSRGEAGQTLKTKKSDGEGRRCGGSD---------------RPGAAGGSMPMWQEVAVPSERSVRAREWRIVVETLRLGGQ---QEWPGRGGEAIVGLELELKEAEVDADDLQMLHAAHNLLEVLHQADMLRLPHGPKRRHFEVAQLEKMVDRVKEGYTATAVGIHFSSRVQLKEARQACEAALAAAERKRAGSLEWWEVALRVMEGTPEDKNFVQTAQLELLHDKAGQFGVTVRMTFPKFNSSSGLRM----MLSLK-IKEARERRALVLRKLEALRTDPGPMEVHLNSNCRRCRADWAKSGPVCGHCKIEEDIDFWEACLVYFRRPHKSPSAGGGSAAAFLQPGLQTEDGLAQQGPGANNAHQGQTFKEPAATVKLLRLIQSWLRERVQGAGGSGLEDWTALIAESKEFLASWEVSVKELTSARTLWRAHFDLLSNLDELESCVTHLRLAEKGERLDLLTEEQRRMVLPEATLSIKRREYELERQAAAYSLDRSRGQLTYLNTLVNEQRDAL-STKTCAVCHDDLVEEVAVVPCGHSFHPLCIEFLLKV--------GNGYIFRYLSMCPTCRRSSSVSSVSYTTTLN--QSDGSASG-------------LPVKGSWGTKITALVGDVLALRPSD---KCLVFSQWDEMLDIVEMAFKENAISCARMKGKKRSESALESFRAA--NGPRALMLPIKSGSHGLNLVEANHVFMLEPLLNAAVEAQAINRVHRGGQTRPTTVHRLVVRGTIEEEIESLRKKKA 6258 A++ LA DVVLTT+D LRA++ H + + G +LR +K+Y+V+P+PL L WWRV +DEA MVES+T + +M LK+ A +R WC++GTP+ +G ++D++GLL FL+A P DS+ W A + P + A R L+ +MWR +KA V +I +P QQ +DR L FS+VEAHFY++QH A AR ++ TA G +GV+ KL LL+LRQACCHP +GS G+ S QR +TM+++L L+++ R++AEE QR ++ +LN G +A + GD P RE G + + + R + + L A G R P P S L + + + + A +V S +D GK E S G KK + GGG C+ V+ R ++ D+ E G VA +A D + V + C + G W G+ R +PP + + E K D RG L + L + + S+ D R +L +L+ PP V E T +D G C + A G M + E A+ ++ AR V ++ QE P +A GL + D A +L + D +R G V +K ++ ++ R + +AR LA A+R +L+ +A+ + + F + + K + R T KF + L+ + LK +KE R+R A A + PGP + + A P + D K+ S GG + L +E+ L PG+ G+ G G D +P AT AA G +D L S + C VC + L E+ V+PCGH LC + LK+ R CPTCR+ + V ++ + + G A G + VKGS TK+ A+V VL + +D K L+FS W ++LD+V A + N + R KG+ A++ FR G RAL+LPI G++GLNLVEA HV ++EPLLN EAQA+ RVHR GQ RPT VHR ++ G++EE + +L KKKA Sbjct: 832 AVVGAHDLARADVVLTTYDALRADLAHEPAGWGEAGG-----RALRSKKRYQVVPTPLTRLTWWRVCLDEAQMVESSTAKATEMALKLRAVNR-----WCISGTPIQRG-LEDLYGLLKFLRADPFDSRFWWNRAFQGPYEAGHVAAKRRAHVFLRALMWRNSKADVQDEIGLPPQQERIDR-LRFSAVEAHFYRRQHDVVAAQARDVIRKHRRAALPRSRQNPHKKTAPHSGPSDPAXXXXXXXXXXXXXXXXXXXXXDHKGVQIAREESPFEDLADETLTHAEAAKLMVPLLRLRQACCHPQVGSSGI--------------------RSLTQQRSPMTMEEILGVLVEKARVEAEEAQRLMVSSLNGLGGLALI----------EGDRPAAIKAYREALGVVEENEVKDGIRTDPLQKLHTLHNL----AQALGYR-------------------------------------PNPFS---VALLGGENTGNEGSDQEKTEGARRKELVGPSGEEDRKGKRKIEDGTETESNGTERKKRRISSVDQDEIVVEGGGGCQE--------------------VKLPPDVPRTLRDDKLL-DEAEEIRGRYVAAFQAKLAAADKEYQKVHTEVVESTEACRREPGGSCWWVGYLRA---LPPRNEEALVDYVKE------KLLEND-----RGHLDSRQKNASNLALRFRDIGGLQYVLQSELAAV-DASRGALLESLHALSGPPTEELV------ERAGDCATCHTDMRGEMCAHCAMDELFQNYESRLFKLKANAMGVGMVVTAEEAISAQSKKFARGRAHFVAGIKGDVDKPPQEGPQLWDDAGKGLRQGMASTAADVQTSWAPSDAERILRCI--LDFMRRNSGANSGEGAVRAAKKHLEAME------------GMRREFFKARL-----LAGAQRALLYALDELGMAVTRVRLRLPGETFESEVEKNVTVQKFEIPVMNARFTSEKFAAQEDLKKRKGSLTYLKTLKETRDRAA------SAASSGPGPSDAPKRPDALPAEAADGGGSPS----NLAADA--------------KANSIGGRALTLDSPSNLSSEEVLGPSQPGS------------------------------PGSLGKGSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--------QAVPPAT--------------AAPGSSSGLG------------KDLLGSDEICPVCQERLGVELMVLPCGHM---LCCKCALKMIERLGPAPSASSPDRRKLTCPTCRQKTYVGDIAVVNGVAGVRKPGGAGGAKTQLEAVGVEDRVEVKGSLSTKMDAVVRRVLWVSENDPAAKFLIFSTWHDVLDLVAHALRSNGVPFERAKGRAGLNPAIKRFRKPFPAGARALLLPIAQGANGLNLVEAQHVVLVEPLLNPGAEAQAVGRVHRIGQMRPTFVHRFIIEGSVEEGVLALGKKKA 2108
BLAST of mRNA_F-serratus_M_contig1056.572.1 vs. uniprot
Match: A0A7S2XN70_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN70_9STRA) HSP 1 Score: 211 bits (537), Expect = 4.890e-53 Identity = 197/743 (26.51%), Postives = 329/743 (44.28%), Query Frame = 1 Query: 4270 RAREWRIVVETLRLGGQQEWPGRGGE----------AIVGLELELKEAEVDADDLQMLHAAHNL----------LEVLHQADMLRL-------PHGPKRRHFEVAQLEKMVDRVKEGYTATAVGIHFSSRVQLKEA---RQACEAALAAAERK---RAGSLE--------WWEVAL--RVMEGTPEDKNFVQTAQLELLHDKAGQFGVTVRMTFPKFNSSSGLRMMLSLKIKEARER-----RALVLRKLEALRTDPGPMEVHLNSNCRRCRADWAKSGPVCGHCKIEEDIDFWEACLVYFRRPHKSPSAGGGSAAAFLQPGLQTEDGLAQQGPGANNAHQGQTFKEPAATVKLLRLIQSWLRERVQGAGGSGLEDWTALIA----ESKEFLASWEVSVK-ELTSARTLWRAHFDLLSNLDELESCVTHLRLAEKGERLDLLTEEQRRMVLPEATLSIKRREYELERQAAAYSLDRSRGQLTYL--------------------NTLVNEQRDALSTKTCAVCHDDLVEEVAVVPCGHSFH-PLCIEFLLKVGNGYIFRYLSMCPT-CRRSSSVSSVSYTTTLNQSDGSASGLPVKGSWGTKITALVGDVL-ALRPSDKCLVFSQWDEMLDIVEMAFKENAISCARMKGKKRSESALESFRAANGPRALMLPIKSGSHGLNLVEANHVFMLEPLLNAAVEAQAINRVHRGGQTRPTTVHRLVVRGTIEEEIESLRKKKASKTF 6270 ++ WRI+V+T E R G VGL++ E + D LQ LH HNL LE Q + + P P+R+ ++ ++R++ Y +V I S+ QL EA R+ CEA + +++ G+++ W +V R+ E ++ + + AG + + + +F S GL + L+L+ + + + + + L +P E+ NS C++CR++W GP C C++E+D+ +E+ L +P + L L + W+++ +G ++ A+I+ + E + + K E+ A+ W+A+ +L S +DEL C +RL+ GE + LTE++R++++ +++ +YE ++ A +L + + L YL N + + Q + C +C E AV+ CGH FH C+E L+ G+G+ CP C + V T DGS + GSWGTK+ LV DV+ + +K ++FSQWD+ML I+E A N + R K K+ AL FR P L+L +K+G+ GL LVEA +VFM+EPLL+ ++ QAINR+HR GQTR T V+R +V TIE +I+ LR ++ F Sbjct: 15 KSSTWRIIVKTYHNAAHME--SRKGIDNTDIFYSKFIYVGLKVFFMEPNIAMDSLQNLHILHNLSSLSNEFPQSLEGRSQLTINNITNINTSHPGYPERK-----SIQAQIERIEALYNEQSVLIQRESKRQLLEAKDLREKCEAEVTLIKKRIGESCGTIQGPKKLMGVWGDVLAFARIHATVHERESICDHVRSDYSSFLAGTY-LEKGLKLAQFESIDGLNIALNLRFQMVNDDFGSDDSSSPIDAVAGLSANPNEGELLENSQCKKCRSEWHMRGPTCRLCRLEKDLRNYESKLT-----------------------------------------------DPVISCVLASLGR-WVKD----FSNNGRKNHPAMISMKLPDRVELFFKLQAAKKNEIKIAKLAWKANLELYSAIDELNQCKQSMRLSYPGEDVMQLTEQERQLIVEPIDIAVLTMDYEAKQAMALSALRQQKDTLRYLKNQSIERREQNMVMEKSQSNNEIASGQEHDEEGQICPLCLATFDGERAVLACGHVFHYSPCLESLISRGSGHSIA----CPLRCAIKTKRDDVMIATDRRHDDGSRVMRDISGSWGTKVDRLVSDVIDVIERGEKGIIFSQWDDMLFILEEALTANKVEYVRPKSMKKIGEALSRFRFGRCP-ILLLNVKNGAEGLTLVEATNVFMMEPLLHCGLDLQAINRIHRIGQTRKTHVYRYIVEDTIEMKIDKLRMERQENHF 692
BLAST of mRNA_F-serratus_M_contig1056.572.1 vs. uniprot
Match: A0A1E7FX51_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX51_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.200e-52 Identity = 126/336 (37.50%), Postives = 191/336 (56.85%), Query Frame = 1 Query: 5257 TALIAE-SKEFLASWEVSVKELTSARTLWRAHFDLLSNLDELESCVTHLRLAEKGERLDLLTEEQRRMVLPEATLSIKRREYELERQAAAYSLDRSRGQLTYLNTLVNEQRDALSTKTCAVCHDDLVEEVAVVPCGHSFHPL-CIEFLLKVGNGYIFRYLSMCPT-CRRSSSVSSVSYTTTLNQSDGSASGLPVKGSWGTKITALVGDVLALRPS-DKCLVFSQWDEMLDIVEMAFKENAISCARMKGKKRSESALESFRAANGPRALMLPIKSGSHGLNLVEANHVFMLEPLLNAAVEAQAINRVHRGGQTRPTTVHRLVVRGTIEEEIESLRKK 6252 T+ +AE +K F E +E A +WR H DLL+ DEL SC LRL+ + E L LLTEEQ ++ L + ++E ++ L R+ G L YL +++TC VC E+AV+ CGH FH C + +L +G + CP CR ++ + V T + DGS +KGS+GTKI+ ++ D+L +R +K ++FSQW++MLDI+E A EN ++ AR G + +L SF++ N L+L +K G+ GL LV A HVFM+EP++N ++ QAINR+HR GQT+ T V R +++ TIE +++ +R K Sbjct: 9 TSHVAERAKYFFEVLEAEEREKIGANRMWRVHLDLLNGFDELVSCKQSLRLSLEDENLTLLTEEQLNAIVQPIDLLSQYNDHEAKQAMHLGELRRAIGTLRYLQNQNTSNGKESASETCVVCLRHFHGEMAVLRCGHRFHQKPCFDQILSRSSGTSVQ----CPMKCRLLTAKNEVMIATNKARDDGSNVTRKIKGSYGTKISRIISDILTIRDKGEKGVIFSQWNDMLDILESALIENDVAIARPHGGRGFSESLRSFQSPNCT-VLLLNLKQGAEGLTLVHATHVFMVEPIINNGLDQQAINRIHRIGQTKKTFVWRYLIQDTIEMKLDKMRLK 339
BLAST of mRNA_F-serratus_M_contig1056.572.1 vs. uniprot
Match: A0A7S3QG57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QG57_9STRA) HSP 1 Score: 214 bits (546), Expect = 5.130e-52 Identity = 194/739 (26.25%), Postives = 334/739 (45.20%), Query Frame = 1 Query: 4234 WQEVAVPSERSVRAREWRIVVETLRLGGQQEWPGRGGEAIVGLELELKEAEVDADDLQMLHAAHN---LLEVLHQ-------------------ADMLRLPHGPKRRHFEVAQLEKMVDRVKEGYTATAVGIHFSSRVQLKEA---RQACEAALAAAERKRAG------SLEWWE--VALRVMEGTPEDKN----FVQTAQLELLHDKAGQFGVTVRMTFPKFNSSSGLRMMLSLKIK---------------EARERRALV-LRKLEALRTDPGPMEVHLNSNCRRCRADWAKSGPVCGHCKIEEDIDFWEACLVYFRRPHKSPSAGGGSAAAFLQPGLQ-TEDGLAQQGPGANNAHQGQTFKEPAATVKLLRLIQSWLRERVQGAGGSGLEDWTALIAESKEFLASWEVSVKELTSARTLWRAHFDLLSNLDELESCVTHLRLAEKGERLDLLTEEQRRMVLPEATLSIKRREYELERQAAAYSLDRSRGQLTYLNTLVNEQRDALSTK-----------TCAVCHDDLVEEVAVVPCGHSFH-PLCIEFLLKVGNGYIFRYLSMCPT-CRRSSSVSSVSYTTTLNQSDGSASGLPVKGSWGTKITALVGDVLAL-RPSDKCLVFSQWDEMLDIVEMAFKENAISCARMKGKKRSESALESFRAANGPRALMLPIKSGSHGLNLVEANHVFMLEPLLNAAVEAQAINRVHRGGQTRPTTVHRLVVRGTIEEEIESLR 6246 WQ++ R +++ WRI++++ + G+E++L E ++ D LQ LH HN L+ L Q D + G ++ + Q EK ++ Y A + +S+ +L EA R+ + A + S WW+ +AL ++G ++ V+ EL +D + + R +FP+ S GL + LS++++ E + L ++K+ L P E+ NS+C +CR+DW + GP C C +EE+ L+ + K L Q + L +QG G+N K ATV ++ L + + +FL + +KEL A++ WR H DLLS++DEL C +RL K E L L+ ++ ++ + ++ ++ A +L +S+ L +L E++ C++C + AV+ CGH +H C+E L+ G +CP C + + + + + DGS + ++GSWGTK+ L+ D++ + +K +VFSQWD+ML I+E A + N + R +G K+ A++ FR +N L++ +K G+ GL LVEANH+FM+EPL+N ++++QAINR+HR GQT T +HR ++ TIE +I+ +R Sbjct: 1042 WQQIE-GGLRPHKSKSWRILIKSYHDISNNSASVAVPKVFGGMEIQLMEPDIVPDSLQRLHILHNGALALDTLQQKQRESGDDXXXXXXXLDGKGDSGKFCEGNIAQYLQHMQDEKK--SLETHYIEAARVLQIASQQRLLEATVKRKDITKEIHALNGPKGWGRIGMESQPWWQDLLALCHLQGKTNVQSSLVEHVEEGLFELYNDPSQPYS---RRSFPRVQSLDGLTIALSMRMEANTFFPHLGGGDNKYEGNRNQVLSSIQKIADLSDHPTDAEIFENSHCHKCRSDWEQKGPKCKCCFLEEE-------LLKHQESVKDVEIN-----CILSAMHQFVKQSLRRQGTGSNK-------KSSLATVNMMTLEE-----------------------RADKFLEFKDAVLKELDCAKSKWRTHLDLLSDIDELNQCKRTMRLVYKDENLFGLSNHEQAFLVQPRDIPALIMDHSAKQAMAEGTLRKSKELLRFLKNQNLERKQXXXXXXXXXXXXXXXXVCSICLCPFENDRAVLRCGHMYHYSPCLERLIARSGG---SRTIICPMRCAIRTKREDILIASEIRKDDGSRTKRKIEGSWGTKVDRLISDLIGVVEIGEKSIVFSQWDDMLAIMEHALQANHLRYVRPRGLKKFGDAMKFFRTSNC-HVLLMHVKHGAEGLTLVEANHIFMIEPLINHSMDSQAINRIHRIGQTSKTYIHRYIIEDTIEVKIDRIR 1728 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1056.572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1056.572.1 >prot_F-serratus_M_contig1056.572.1 ID=prot_F-serratus_M_contig1056.572.1|Name=mRNA_F-serratus_M_contig1056.572.1|organism=Fucus serratus male|type=polypeptide|length=2109bp MGQTGGMLRIRRDVFEAVQELDCAGYIAITAKETPVTVSSGTSPLSSPGDback to top mRNA from alignment at F-serratus_M_contig1056:102433..147850+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1056.572.1 ID=mRNA_F-serratus_M_contig1056.572.1|Name=mRNA_F-serratus_M_contig1056.572.1|organism=Fucus serratus male|type=mRNA|length=45418bp|location=Sequence derived from alignment at F-serratus_M_contig1056:102433..147850+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1056:102433..147850+ >mRNA_F-serratus_M_contig1056.572.1 ID=mRNA_F-serratus_M_contig1056.572.1|Name=mRNA_F-serratus_M_contig1056.572.1|organism=Fucus serratus male|type=CDS|length=12654bp|location=Sequence derived from alignment at F-serratus_M_contig1056:102433..147850+ (Fucus serratus male)back to top |