mRNA_F-serratus_M_contig1056.569.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1056.569.1 vs. uniprot
Match: A0A6H5KXZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ2_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 2.670e-5 Identity = 65/215 (30.23%), Postives = 78/215 (36.28%), Query Frame = 2 Query: 407 KRRRIPIEMRSSGRE----TPGGGREWEPATPSSQGTP--------------------------------------RAGRA----PMTPAEQTRRILSVLDDLVPSSEHLPAPSAAPRTMKXXXXXXXXXXXXXXXXXVAPSSLR---VPAPTTPSAALNARAYLPRSLEDLDPLPTRSLVYETAFKGGSAPTE-----LTPARLPPSRWARRQS 889 KR ++ E GR TPGG R W+PA +QGTP R+GR TPA TRRI+S LDD +PSSLR +P P+ P AL R R +D +PLPTR L G A +TPARLPPSRWA R+S Sbjct: 543 KRAQVQAERDGRGRSFAHATPGGARVWKPAAAPNQGTPWAAERQQQPARTLAAAGEPRQQGGWDSSAAAPGSIGRRRSGRGYGDDANTPASMTRRIMSALDDAG-----------------------------------SPSSLRRLTLPGPSPPRDALALRR---RKYDDAEPLPTRMLSVPHPASGYGARAAAGGVGVTPARLPPSRWAARKS 719 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1056.569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1056.569.1 >prot_F-serratus_M_contig1056.569.1 ID=prot_F-serratus_M_contig1056.569.1|Name=mRNA_F-serratus_M_contig1056.569.1|organism=Fucus serratus male|type=polypeptide|length=287bp MKRRPMPIEIRPFARVWEAATSSAKGTRLAGSSLNVPIPLRAAPSPEMKTback to top mRNA from alignment at F-serratus_M_contig1056:42582..56896+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1056.569.1 ID=mRNA_F-serratus_M_contig1056.569.1|Name=mRNA_F-serratus_M_contig1056.569.1|organism=Fucus serratus male|type=mRNA|length=14315bp|location=Sequence derived from alignment at F-serratus_M_contig1056:42582..56896+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1056:42582..56896+ >mRNA_F-serratus_M_contig1056.569.1 ID=mRNA_F-serratus_M_contig1056.569.1|Name=mRNA_F-serratus_M_contig1056.569.1|organism=Fucus serratus male|type=CDS|length=1722bp|location=Sequence derived from alignment at F-serratus_M_contig1056:42582..56896+ (Fucus serratus male)back to top |