mRNA_F-serratus_M_contig1055.564.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1055.564.1 vs. uniprot
Match: A0A7S1XG35_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XG35_9RHOD) HSP 1 Score: 467 bits (1201), Expect = 8.290e-152 Identity = 245/520 (47.12%), Postives = 325/520 (62.50%), Query Frame = 1
Query: 379 YEELCGKLRQVERLGGVEGLLTWDEQASKTMFSHWAASRANQKATLAGVIHEKKVDEGLGEVLRQLKDCGQSTSELSPLEAAVVRDAARDYRHETRKSKDLAAKEADIESKGYGVWVEAKGKGDWPSFAPIMREMVDVKREVAEATRPELGGAGGGGAYDGCLDRFERGMSAARLQEVFDELKSALVPLLRDIQAKVEEEKESGAGSKRFPAALHAGKQWGEDDQAALCRDIAERLGFKMENGRLDVSVHPFTGGPGPSDVRITTRFSSNW-VEGISGTVHEVGHALYEQGRPGGEAEDLPVSRALSMGVHESQSLLWERMVFLSRPFWSFAAPLVHARFPHTEEIDAEAFYRGLNRVEPGAIRVDADEVTYPLHVILRFEIEQGLMDGSLAVDDIPAAWTSKMKELLGVDVSGDDAKGCLQDVHWSVGAIGYFPSYTLGAVMACQFFEAAR-KALPDLDDQLASGNFEPLKNWLNREVHAKGSLFDSPDELLRNVTGEVMQPKALIDHLRSKYADLYGL 1932
Y L L+ V L V GLL WDEQ S A RA QKA L GVIHE++ + L + + + +D + L + AVVRDA R+++ S +L A+ E+ G WV+A+ K +W SFAP + E V + RE A+ATRP L YD +D +ERGM++ RL +FD+++ L LL++I + + P AL W DDQA LCR IA LG+ + GR+DVS HPFTGGPGP DVRITTR+S+ EGI GT+HE GHA+YEQGR LPVS +S GVHESQSL WERM+ S+ FW F P VH FPHT+ + +E FYR +NRV IRVDADEVTYP HVILRF++E+ L DGS+ VD++P W +EL+G+ V D +GCLQDVHW+ GA GYFPSYTLGA+MA Q F +A+PD+ ++ +G+F +++WL++E+H+KGSL S DELL + TGE + P +++LR KY+ YG
Sbjct: 61 YRRLASILQDVSSLEAVSGLLVWDEQVMMPPGS--AEFRAAQKAALVGVIHERETSDALCQAIHEARD---QWAHLDEWQRAVVRDAERNWQLAHGVSVELERSIAEQETLGVQAWVDARKKDEWKSFAPHLHESVRLAREYAQATRPNLP------TYDALIDIYERGMTSERLATIFDQIEKPLRKLLQEILTA----SSNNSVMDEIPTALEGSDHWNVDDQATLCRSIAGMLGYDFQTGRIDVSAHPFTGGPGPQDVRITTRYSTGLPFEGIMGTIHEAGHAMYEQGR-NKVYTGLPVSEPVSTGVHESQSLFWERMIGQSKEFWDFLLPSVHETFPHTKMVSSEDFYRAINRVRRSLIRVDADEVTYPFHVILRFKVEKALFDGSIDVDELPTVWARLFEELIGIPVP-TDREGCLQDVHWASGAFGYFPSYTLGAMMAAQLFHHLESQAMPDIRERTKNGDFTFIRDWLHKEIHSKGSLHPSLDELLESATGEPLNPDYFLEYLRQKYSVRYGF 563
BLAST of mRNA_F-serratus_M_contig1055.564.1 vs. uniprot
Match: A0A8J4LQ96_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LQ96_9CHLO) HSP 1 Score: 466 bits (1199), Expect = 2.770e-151 Identity = 246/541 (45.47%), Postives = 347/541 (64.14%), Query Frame = 1
Query: 319 GRRGGITTTCSAATAGQRELYEELCGKLRQVERLGGVEGLLTWDEQASKTMFSHWAASRANQKATLAGVIHEKKVDEGLGEVLRQLKDCGQSTSELSPLEAAVVRDAARDYRHETRKSKDLAAKEADIESKGYGVWVEAKGKGDWPSFAPIMREMVDVKREVAEATRPELGGAGGGGAYDGCLDRFERGMSAARLQEVFDELKSALVPLLRDIQAKVEEEKESGAGSKRFPAALHAGKQWGEDDQAALCRDIAERLGFKMENGRLDVSVHPFTGGPGPSDVRITTRFSS-NWVEGISGTVHEVGHALYEQGRPGGEAEDLPVSRALSMGVHESQSLLWERMVFLSRPFWSFAAPLVHARFPHT-EEIDAEAFYRGLNRV-EPGAIRVDADEVTYPLHVILRFEIEQGLMDGSLAVDDIPAAWTSKMKELLGVDVSGDDAKGCLQDVHWSVGAIGYFPSYTLGAVMACQFFEAARKALPDLDDQLASGNFEPLKNWLNREVHAKGSLFDSPDELLRNVTGEVMQPKALIDHLRSKYADLYGL 1932
G+ + TT + + YE LC +L+++ + G+ GLL WDE M A SR QKA LAGV+++K+ D LG +L LK L ++AAVVRDAAR+Y T KDLA + A ++++ Y WV+AK + D+ FAP++++ +++ +E A P YD LD +E+G ++ARL +VF +++ LVPL+ +I+++ ++ + G + + QA LC+ +A LGF +GRLDVSVHPFTGG P+DVR+TTRF N VEG++G +HE GHALYEQGR E + LPV+ ALSMGVHESQSLLWERMV LSRPF ++ PL+ ARFP + E Y N + EP IRV+ADEVTYPLH+ILR+E+E+GL++G++ V+D+P W +M LG DD+KGCLQD+HWS+GA GYFP+YTLGA+ A Q + AA+K + DL+D + G+F+PLK+WLN ++H GSL +S DEL+ TG + P +D+L++KY DLY L
Sbjct: 63 GKAAAVPTTAVSVPKEPAKAYEALCERLKEISTIHGINGLLDWDEMVM--MPPGAAGSRGTQKAVLAGVLYDKETDPQLGALLDVLK--AAPADSLDAVQAAVVRDAAREYVKRTALPKDLAQRIAKLKTEAYAAWVKAKTESDFSVFAPLLKQWIEISKEKARLIDPTKP------VYDVLLDDYEKGATSARLDQVFTQVREGLVPLIAEIKSR----------GRKIDYSWMVG-DFDTEKQAELCKQVAIDLGFDTTHGRLDVSVHPFTGGAHPTDVRMTTRFKKENLVEGLTGAIHETGHALYEQGR-NLEYDGLPVNNALSMGVHESQSLLWERMVGLSRPFAAYLMPLIKARFPEAFASVTPEQLYEAENVIQEPSLIRVEADEVTYPLHIILRYELEKGLLEGTIPVEDVPKIWNERMTSDLGA-TPPDDSKGCLQDIHWSLGAFGYFPTYTLGAMYATQIYAAAKKDIADLEDLIRVGDFKPLKSWLNEKIHKLGSLHNSGDELMTVATGGPLDPAVFLDYLKTKYTDLYKL 580
BLAST of mRNA_F-serratus_M_contig1055.564.1 vs. uniprot
Match: A0A835XMQ9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XMQ9_9CHLO) HSP 1 Score: 462 bits (1188), Expect = 3.420e-150 Identity = 252/524 (48.09%), Postives = 338/524 (64.50%), Query Frame = 1
Query: 379 YEELCGKLRQVERLGGVEGLLTWDEQASKTMFSHWAASRANQKATLAGVIHEKKVDEGLGEVLRQLKDCGQSTSELSPLEAAVVRDAARDYRHETRKSKDLAAKEADIESKGYGVWVEAKGKGDWPSFAPIMREMVDVKREVAEATRPELGGAGGGGAYDGCLDRFERGMSAARLQEVFDELKSALVPLLRDIQAK---VEEEKESGAGSKRFPAALHAGKQWGEDDQAALCRDIAERLGFKMENGRLDVSVHPFTGGPGPSDVRITTRFSSN-WVEGISGTVHEVGHALYEQGRPGGEAEDLPVSRALSMGVHESQSLLWERMVFLSRPFWSFAAPLVHARFPHT-EEIDAEAFYRGLNRV-EPGAIRVDADEVTYPLHVILRFEIEQGLMDGSLAVDDIPAAWTSKMKELLGVDVSGDDAKGCLQDVHWSVGAIGYFPSYTLGAVMACQFFEAARKALPDLDDQLASGNFEPLKNWLNREVHAKGSLFDSPDELLRNVTGEVMQPKALIDHLRSKYADLYGL 1932
Y+ LC +L++V LGG+ GLL WDE M A SR QK+ LAGV+++KK D LG++L LK L P +AAVVRDA + + +T K+LA + A +ES Y WV+AK D+ FAP ++E V+V +E A P L YD LD +E+G+++ARL EVF +++ LVPL+ I+ + +E++ G + D QA LC+ IA +GF ++GRLDVSVHPFTGG P+DVR+TTRF + +EGI+G +HE GHALYEQGR + + LPV+ ALSMGVHESQSLLWERMV L RPF ++ PL+ RFP AE Y G N++ +P IRV++DEVTYPLH+ILR+E+E+GLMDGS+ VDDIP W +M+ LG D DA GCLQDVHWS G GYFP+Y+LGA+ A Q + AA KA+PDL+ ++ +G+F+PLK WLN ++H+ GSL S DEL+ +VTG + P + +L KY DLY L
Sbjct: 44 YDALCDRLKEVSVLGGISGLLGWDEMVM--MPPGAADSRGAQKSALAGVLYDKKTDPVLGQLLDALKAAPPGA--LDPYQAAVVRDAGKQFIKDTALPKELAQRIAKLESDAYAAWVKAKTASDFSLFAPFLKEWVEVNKEKARLIDPSLP------PYDVLLDDYEKGLTSARLDEVFAQVREGLVPLIAAIKTRGRAIEDKWMDG--------------DYDLDKQAELCKKIALDIGFDTDHGRLDVSVHPFTGGAHPTDVRMTTRFKKHSLLEGITGAIHETGHALYEQGR-NLKYDGLPVNAALSMGVHESQSLLWERMVGLGRPFAAYLLPLLKERFPDKFGAASAEQLYEGENKIAQPSLIRVESDEVTYPLHIILRYELERGLMDGSVNVDDIPKLWNERMEAYLG-DRPPSDAMGCLQDVHWSAGLFGYFPTYSLGAMYATQIYAAASKAIPDLEAKIQAGDFKPLKAWLNEQIHSLGSLHASGDELMTHVTGGPLDPSVFLAYLTKKYTDLYKL 541
BLAST of mRNA_F-serratus_M_contig1055.564.1 vs. uniprot
Match: A0A7R9VT42_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VT42_9CHLO) HSP 1 Score: 462 bits (1188), Expect = 1.830e-149 Identity = 254/564 (45.04%), Postives = 350/564 (62.06%), Query Frame = 1
Query: 259 RTPERANSQQRAHQAAAAGAGRRGGITTTCSAATAGQRELYEELCGKLRQVERLGGVEGLLTWDEQASKTMFSHWAASRANQKATLAGVIHEKKVDEGLGEVLRQLKDCGQSTSELSPLEAAVVRDAARDYRHETRKSKDLAAKEADIESKGYGVWVEAKGKGDWPSFAPIMREMVDVKREVAEA---TRPELGGAGGGGAYDGCLDRFERGMSAARLQEVFDELKSALVPLLRDIQAKVEEEKESGAGSKRFPAALHAGKQWGEDDQAALCRDIAERLGFKMENGRLDVSVHPFTGGPGPSDVRITTRFSSN-WVEGISGTVHEVGHALYEQGRPGGEAEDLPVSRALSMGVHESQSLLWERMVFLSRPFWSFAAPLVHARFPHT--EEIDAEAFYRGLNRVEPGAIRVDADEVTYPLHVILRFEIEQGLMDGSLAVDDIPAAWTSKMKELLGVDVSGDDAKGCLQDVHWSVGAIGYFPSYTLGAVMACQFFEAARKALPDLDDQLASGNFEPLKNWLNREVHAKGSLFDSPDELLRNVTGEVMQPKALIDHLRSKYADLYGL 1932
RTP ++ + + + G R + ++A ++ YE+LC KL+++ + G+ GLL WDE M A SRA QK+ LAGV+++K+ D LG +L+ L G+ +L + A VRDA ++Y T KDLA + A ES Y WVEA+ DW FAP ++ V++ RE A A TRP YD LD +E+GM+ R+ EVF +++ LVPL+ I+ K E + S K + L QA LC+ +A +GF ++NGRLDVSVHPFTGG P+DVR+TTRF + +EG++G VHE GHALYEQGR E + LPV+ +LSMGVHESQSLLWER V LS+PF + P + + FP + AE YR +N V PG IRV+ADEVTYP+HV+LR+E+E+GL+DGS+ V+ +P W +KM+ LGV +DAKG LQD+HWS+GA+GYFP+Y+LGA+ A Q F AR +P+LD + GNF+PLK WLN+ +H+ GSL S DEL++ VTG + P + +L KY LY L
Sbjct: 50 RTPRLLHNSGGSGTSTSRGVATRAATASQMASAAIDTKQTYEKLCEKLKELSAIQGISGLLGWDEMVM--MPPGAAGSRAAQKSALAGVVYDKETDAELGSLLKALLAAGEE-GQLDEWQRANVRDAHKNYVKATAVPKDLAQRIAKHESDAYQAWVEARKASDWSKFAPALQTWVELSREKAAAIDPTRP---------VYDVLLDTYEKGMTTQRIDEVFAQVREGLVPLIAKIKEK--EAENSNDWIKGSYSVL---------TQAELCKSVALDMGFSLDNGRLDVSVHPFTGGAHPTDVRMTTRFKDDDLLEGLTGAVHETGHALYEQGR-NLEHDGLPVNSSLSMGVHESQSLLWERCVALSKPFSQYLKPKLASLFPEKFGGAVTAEDLYRAMNVVRPGLIRVEADEVTYPMHVVLRYELERGLLDGSITVEQLPELWNTKMESYLGVRPE-NDAKGVLQDIHWSMGALGYFPTYSLGAMYAVQIFNKARLEIPELDAHIVEGNFKPLKTWLNKHIHSLGSLHPSGDELMKAVTGSALDPSVFLKYLTDKYTPLYKL 588
BLAST of mRNA_F-serratus_M_contig1055.564.1 vs. uniprot
Match: A0A5B8MP60_9CHLO (Thermostable carboxypeptidase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MP60_9CHLO) HSP 1 Score: 457 bits (1175), Expect = 8.530e-149 Identity = 244/525 (46.48%), Postives = 336/525 (64.00%), Query Frame = 1
Query: 373 ELYEELCGKLRQVERLGGVEGLLTWDEQASKTMFSHWAASRANQKATLAGVIHEKKVDEGLGEVLRQLKDCGQSTSELSPLEAAVVRDAARDYRHETRKSKDLAAKEADIESKGYGVWVEAKGKGDWPSFAPIMREMVDVKREVAEATRPELGGAGGGGAYDGCLDRFERGMSAARLQEVFDELKSALVPLLRDI----QAKVEEEKESGAGSKRFPAALHAGKQWGEDDQAALCRDIAERLGFKMENGRLDVSVHPFTGGPGPSDVRITTRFSS-NWVEGISGTVHEVGHALYEQGRPGGEAEDLPVSRALSMGVHESQSLLWERMVFLSRPFWSFAAPLVHARFPHTEEIDAEAFYRGLNRVEPGAIRVDADEVTYPLHVILRFEIEQGLMDGSLAVDDIPAAWTSKMKELLGVDVSGDDAKGCLQDVHWSVGAIGYFPSYTLGAVMACQFFEAARKALPDLDDQLASGNFEPLKNWLNREVHAKGSLFDSPDELLRNVTGEVMQPKALIDHLRSKYADLYGL 1932
E Y L +L++++ L G++ +L WDE M A SRA QKA LA VIH+++ E LGE++ + G L P++ A VRDA + +TR K+LA +EA + S+GY W +A+ D+ SF P++ ++V ++ + A+A PE YD +D+FERGM A+RL E+F+ +K+ LVPL+ +I Q V+ G + F D Q ALC + ERLGF+ G L+ S+HPFTGG SDVRITTR+ +++ G++G VHE GHALYEQ RP GE +PVS ALSMG+HES SLL+ERMV S FW+F P+V F TE ++AE FY+ +N+V+ IRVDADE+TYPLH+I+RFE+EQGL DGS+ VD++P W K+ LG+DV D +G LQDVHWS A GYFPSYTLGA+ ACQFF+ A K++P+L ++A GNFE L+ WL +H+KGSL+ S DEL +VTG+ + P +D LR+KY LY +
Sbjct: 5 EAYTALAEELKEIDALSGIDAILGWDELV--VMKEKSAESRAAQKAALASVIHQRQTSERLGELISSAEREGG----LDPMQEASVRDARLKFDRKTRMPKELAKQEAILGSEGYQAWAKARENDDYDSFKPVLSKIVQLRIDEAKAVAPEKL------PYDYQIDKFERGMKASRLAEIFETVKAGLVPLIEEITSAPQLSVDARLAGGDAAPIFEV----------DKQEALCAQVMERLGFE---GILNRSLHPFTGGTA-SDVRITTRYDDKDFISGVAGLVHETGHALYEQNRPAGENLGMPVSEALSMGIHESMSLLFERMVGQSMEFWTFLRPMVAESFEFTENLEAEDFYKAINKVQKSLIRVDADELTYPLHIIIRFELEQGLFDGSVTVDNLPDKWRELYKQYLGIDVPSDK-EGVLQDVHWSSLAFGYFPSYTLGAMYACQFFQHAEKSIPNLGAEIAEGNFESLRAWLRENIHSKGSLYPSADELCEHVTGKPLDPTIYLDFLRAKYRKLYKM 502 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1055.564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1055.564.1 >prot_F-serratus_M_contig1055.564.1 ID=prot_F-serratus_M_contig1055.564.1|Name=mRNA_F-serratus_M_contig1055.564.1|organism=Fucus serratus male|type=polypeptide|length=639bp MQGHAHRRVPTLKKQTSTIASMKHRAATTTVALGLLATPSRSTMGLRGTGback to top mRNA from alignment at F-serratus_M_contig1055:60010..102279- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1055.564.1 ID=mRNA_F-serratus_M_contig1055.564.1|Name=mRNA_F-serratus_M_contig1055.564.1|organism=Fucus serratus male|type=mRNA|length=42270bp|location=Sequence derived from alignment at F-serratus_M_contig1055:60010..102279- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1055:60010..102279- >mRNA_F-serratus_M_contig1055.564.1 ID=mRNA_F-serratus_M_contig1055.564.1|Name=mRNA_F-serratus_M_contig1055.564.1|organism=Fucus serratus male|type=CDS|length=3834bp|location=Sequence derived from alignment at F-serratus_M_contig1055:60010..102279- (Fucus serratus male)back to top |