mRNA_F-serratus_M_contig1055.563.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: F0YNU3_AURAN (Nudix hydrolase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNU3_AURAN) HSP 1 Score: 253 bits (645), Expect = 1.060e-71 Identity = 144/322 (44.72%), Postives = 188/322 (58.39%), Query Frame = 1 Query: 394 ECRDMVESLKIVPNKSWGKASK--AQQQRWELMECNSVVEGRTVRRAEPIDCTSRPSKPSD----PLIAVCAGSTTRG-----VPL---LEERSLALFRFLLPSLERTADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLG-ANYTYRVNDDSEMITPWARKFVDALEAMGTPYGVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAHGA 1308 EC + + + P +WG + + +RW+ + C VVE R P PLIAVC+G+TTR P LE+ LA F++LLPS +RTA+CGF Y + YDVGD+F+D G A+ +WFE +A P A+ + +EL V+VDN ++KPGPVF A+T+AAY A+Y YRVNDD+E T WAR FV+AL +MG G VGP N IL HDFTHR HMDIF+G YYP L+DW++DDWI+ VYG RT+ +V HHTG HGQRY D + V LI AG R+ + A A Sbjct: 379 ECFALQATHGVKPAMTWGTLDRNPSSFRRWKELGCGGVVERAANAAXXXXXXXXREVCPKSADPKPLIAVCSGTTTRQKGGWITPRPGHLED--LAAFQYLLPSFKRTAECGFRYLVVLAYDVGDQFWDRGDGVARARAWFEASIATPLAAANMDVELRFVKVDNAVKKPGPVFAAMTRAAYAAWKADYIYRVNDDTEFKTKWARPFVNALASMGN-VGAVGPLCRQGNTAILTHDFTHRTHMDIFDGAYYPPELSDWWMDDWITGVYGSLRTLMGDRVEVIHHTGKHGQRYAVDFAHEKLVKQLIAAGHARVESFVAARDA 697
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A0L0DUY8_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DUY8_THETB) HSP 1 Score: 244 bits (622), Expect = 5.510e-70 Identity = 119/254 (46.85%), Postives = 155/254 (61.02%), Query Frame = 1 Query: 559 KPSDPLIAVCAGSTTRGVPLLEERSLALFRFLLPSLERTADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTPYGVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAHGAEK 1314 +P IAVC STTRG+ SL+LF +LPSL RT + GF Y I +DVGD F++ D A + WF + +A P A+ + ++L +V N +KPGP F + +AA D GA + YR+NDDSE + PWA F L A+G PYG VGP N IL HDF HR H+DIFE YYP AL DW++DDWISRVYG RT++ + ++ HHT HG RY+ D + K+ +E G KRIV W E H E+ Sbjct: 231 EPGPDWIAVCVSSTTRGINPTSLSSLSLFSLMLPSLARTVEPGFRYRVVIIHDVGDAFYEDDGTYAAIEDWFNSRIAHPLAAADIEVQLLMVSFTNTQRKPGPAFNVMLRAAADFGAEWFYRINDDSEFVAPWAVDFTTTLLALGQPYGAVGPLCKQGNTAILTHDFVHRTHLDIFET-YYPPALVDWWMDDWISRVYGASRTVKVNSAEIIHHTDNHGTRYQVDFANQPKLAEALEHGKKRIVAWMEEHDIEQ 483
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: W7T9N6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9N6_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.800e-66 Identity = 113/246 (45.93%), Postives = 154/246 (62.60%), Query Frame = 1 Query: 571 PLIAVCAGSTTRGVPLLEERSLALFRFLLPSLERTADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTPYGVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAH 1302 PL+A+ TTRG+ + LALF++LLPSL TA+CG++Y +GYD GD F+DT +G + +W E + GL + +H V V N ++KPGPVF + +AAYDLGA+Y YRVNDD+E + W F+ LE G PYGVVGP N IL HDFTHR+HM+IF+ YYPE L+DW++DDWI+ VYG RT R + +V HH +RY D + + LI+ G +RI W + + Sbjct: 83 PLVAILVAVTTRGLTFDQPNELALFKYLLPSLWLTAECGYDYRVVVGYDEGDPFYDTPAGVEAVQNWIEHCRQCIPGNVGLWMAVHFVSVKNDLKKPGPVFNKMAEAAYDLGADYFYRVNDDTEFLQTWTTPFIQVLEEFGPPYGVVGPLCKHGNTAILTHDFTHRMHMEIFDRLYYPEELSDWWMDDWITSVYGEARTRRMEAVEVIHHVEGT-RRYDVDFAHKKVLQALIDKGHQRIEGWRKVN 327
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A8J5XRE5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRE5_DIALT) HSP 1 Score: 207 bits (527), Expect = 7.920e-55 Identity = 123/350 (35.14%), Postives = 181/350 (51.71%), Query Frame = 1 Query: 367 AERQEAEARECRDMVESLK-IVPNKSWGKASKAQQQRWELMECNSVVEGRTVRRAEPIDCTSRPSKP--------------------SDPLIAVCAGSTTRGVPLLEERSLALFRFLLPSLERTADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMI-TPWARKFVDALEAMGTPYGVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAHG--AEKAASDIATD 1338 A R A AR C ++ ++ +P SWG +A +Q WE ++C + RA + +R + + P++A+ STTR + + LALFR +LPSL RTA+ GF Y ++ +DVGD F D ++++W + QP RG+ + ++R +N ++KPGPVF + AA++ GA+Y YR+NDD+++ + W + V AL G GVVGP + N +IL HD HR H+ IF G YYP L+DWY+DDW+SRVYG+ RT + V HH G H RY D S ++ + + I W H E AS A D Sbjct: 228 ASRAAAAAR-CVALLRGVRDFLPGTSWGTMGEADRQEWERLDCAQIEPSIVADRAHEVAYAARYKQTLRAALDARRTRLRRRQTGGAALPVVAIGVSSTTRTLSVSSLLDLALFRIMLPSLVRTAESGFEYWVYLAHDVGDPFLDRAGTGRQVVAWCARNLVQPLQQRGIDASVLILRFNNSVRKPGPVFNYMMAAAWEDGADYLYRINDDTQLHGSAWTSQAVAALARFGN-VGVVGPICEQGNVNILTHDMVHRTHVSIFRGLYYPPVLSDWYMDDWVSRVYGQHRTQKGPFA-VTHHIGQHATRYAVDRSHELALERELALSRRAIERWCTTHAPRCELRASVAAAD 574
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A7S3RTR0_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RTR0_EMIHU) HSP 1 Score: 187 bits (476), Expect = 4.450e-52 Identity = 105/256 (41.02%), Postives = 137/256 (53.52%), Query Frame = 1 Query: 577 IAVCAGSTTRGVPLLEERSLALFRFLLPSLERTADCG---------FNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTP-YGVVGPDSL--NNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAHGA 1308 +AV A +T+RG L+LFR LLPSL RT +I YDVGD FFD+ + A W E + P + G+ L+R N ++KPGPVF + AA + GA Y YRVNDD+E + PW + +L + P GVVGP N IL HD HR H+ IFE YYP L+DW++DDWI+ VYG RR + V HHTGAHGQRY D + + G ++ G +RI W + A Sbjct: 1 VAVAASATSRGFSPSGLDDLSLFRLLLPSLVRTVRRSAAAWRLRRQLELRVYIAYDVGDAFFDSRATEAAARVWLEARLVAPLRAAGIATRHALLRFPNPLRKPGPVFNFMMAAAAEDGAEYLYRVNDDTEFVDPWVEPAIRSLRSYSPPNVGVVGPVCAEGNAKILTHDLVHRHHLSIFEF-YYPPVLSDWWMDDWITHVYGTRRFTKGP-FSVRHHTGAHGQRYAVDNAHKAALRGELQRGRQRIEAWVRSSAA 254
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A7S4JWB9_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JWB9_GUITH) HSP 1 Score: 191 bits (486), Expect = 1.790e-50 Identity = 120/331 (36.25%), Postives = 172/331 (51.96%), Query Frame = 1 Query: 391 RECRDMVESLKIVPNKSWGKASKAQQQRWELMECN-------------------------SVVEGRTVRRAEPIDCTSRPSKPSDPLIAVCAGSTTRGV--PLLEERSLALFRFLLPSLERTADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTPY-GVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHT----GAHGQRYKADTSKAGKVDGLIEAGTKRI 1281 + C M I WG+AS + +++W+ + C+ + VE RA P + + + S P+IA+ GST+RG LEE L + LL SL RT + GF Y ++G+D GD F+D + R ++ WFE V+ PA +G+ VR N ++KPGP+F + AA++ GA++ YR+NDD+E T WA FV +L A P+ GVVGP + N IL HDF HR H IF+ YYP L+DW++DDWIS+VY R T R V HHT G + RY+ D S + ++ GT+ I Sbjct: 148 KRCEAMRADAGIEVGVDWGQASSSVKKQWKSLNCDCHYPAGWNDQCLQGTPPAVHNTTTAAGVEAAVAARA-PGEKMKQIAGLSQPIIAIILGSTSRGYRWDSLEESPLVMV--LLSSLLRTLEQGFEYRMYVGFDAGDLFYDDEKRREELTQWFEKHVSSPAKDKGITARFASVRFLNVLRKPGPIFNFLAAAAFEDGADFVYRINDDTEFRTLWAGAFVSSLAAFDPPFLGVVGPTCEDGNRKILTHDFVHRTHSYIFQT-YYPVVLSDWWMDDWISKVYPRSNTGRHAMVVVTHHTWMTGGGNPVRYQVDYSHEPFLKQEVKKGTELI 474
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A7S0UAZ4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAZ4_HEMAN) HSP 1 Score: 188 bits (478), Expect = 2.790e-49 Identity = 123/329 (37.39%), Postives = 168/329 (51.06%), Query Frame = 1 Query: 352 LVEAPAER---QEAEARECRDMVESLKIVPNKSWGKASKAQQQRWELMECNSVVEG----------------RTVRRAEPIDCTSRPSK---------PSDPLIAVCAGSTTRGVPLLEERSLALFRFLLPSLERTADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTP-YGVVGPDSL--NNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQ----RYKADTS 1233 L++A ER Q +E D + + I+P ++WG A+ +Q+++W M C+ E TV R SR P+ P+IAV G+T+R + LF LLPS+ RT + GF Y ++GYD GD F+D A+ +W + V PA +G + + V N ++KPGP+F + A+ GA+Y YRVNDD+E+ T WA FV AL M GVVGP N IL HDF HR+H DIF+ YYP LTDW++DDWISRVY T+R ++ V HHT G RY D S Sbjct: 138 LLKAMFERWKLQSGHRKEECDRLATFGIIPGETWGDATPSQKKQWGDMACDCHYESGWNDMCLSGFPPHVHNTTVWRGIEEAAHSREGDERIVSPHGTPAMPIIAVTVGTTSRSFRWSKLDESPLFGILLPSIARTLEKGFEYRVYVGYDTGDLFYDNADRIAEANAWAKEHVETPAREKGHVVTVKFVSFLNILRKPGPMFNFLAACAFGDGADYVYRVNDDTELRTIWAGAFVTALANMQPANLGVVGPKCPEGNYRILTHDFVHRIHKDIFKV-YYPVVLTDWWMDDWISRVYPMENTMRHEDVWVTHHTWVSGSGNPVRYHVDHS 465
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A7S3WIS4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WIS4_9SPIT) HSP 1 Score: 181 bits (459), Expect = 1.070e-48 Identity = 100/274 (36.50%), Postives = 135/274 (49.27%), Query Frame = 1 Query: 565 SDPLIAVCAGSTTRGVPLLEERSLALFRFLLPSLER-------------------------TADCGFNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTP-YGVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAH 1302 S P+IA+C STTRG LALF ++PSL T F + ++ YD GD F+D +++ SW + P +++G+ L+R N +KPGPVF + +AY GA+Y YRVNDD+ WA L + P GVVGP D N+ IL HD THR HMDIF G YYP TDW++DDWI++VY + +V+H G G RY+ D S A + + G +RI W E H Sbjct: 58 SSPVIAICVSSTTRGTKARRLDDLALFSVMVPSLRNSILADSTPNSSRSEGALTYVVGGIGTKPPAFEFWLYVAYDAGDSFYDAPERESEVRSWLNENLVMPLSAKGVSSRHALLRYVNIFRKPGPVFNFMMASAYADGADYLYRVNDDTRFEGAWASAAALVLASYSPPNVGVVGPICDEGNSRILTHDLTHRTHMDIFNGMYYPPVFTDWWMDDWITKVYEASHRMTKGPFRVQHLIGYQGTRYEVDQSHASLLQHELRLGEQRIQQWIEDH 331
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: A0A0M0K959_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K959_9EUKA) HSP 1 Score: 175 bits (443), Expect = 7.020e-47 Identity = 93/222 (41.89%), Postives = 128/222 (57.66%), Query Frame = 1 Query: 688 FNYAAFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMI-TPWARKFVDALEAMGTP-YGVVGP--DSLNNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWA-EAHGAEKAASDIATD 1338 F Y ++ YD GD+F+D++S A++ SW TE+ P A RG+R+ L+R N + KPGP F + AA++ GA+Y YRVNDD++ + T W V L P GVVGP D N IL HD HR H++IFE YYP +DW++DDWI++VYG RT +A +V H T G RY D S ++ +EAG +RI W G A ++A D Sbjct: 68 FEYWLYVLYDAGDQFYDSESREAEVSSWLTTELVAPLAQRGVRLRFALLRFQNVLHKPGPAFNFMMAAAWEDGADYLYRVNDDTQFVGTEWVGAAVSTLRGYSPPNVGVVGPTCDEGNTRILTHDLVHRTHLEIFE-HYYPPIFSDWWMDDWITQVYGTERTRKAA-FRVRHLTSFQGTRYTIDRSHEQRLQAELEAGRQRIERWLLRRTGGAPVARNVAVD 287
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Match: R1BIA1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BIA1_EMIHU) HSP 1 Score: 176 bits (447), Expect = 6.600e-46 Identity = 118/374 (31.55%), Postives = 166/374 (44.39%), Query Frame = 1 Query: 361 APAERQEAEARECRDMVESLKIVPNKSWGKASKAQQQRWELMECNSVVE------------------------------GRTVRRAEPIDCTSRPSKPSDPLIAVCAGSTTRGVPLLEERSLALFRFLLPSLERTADCGFNYA-------------------------AFIGYDVGDKFFDTDSGRAKMLSWFETEVAQPAASRGLRIELHLVRVDNKIQKPGPVFTAVTKAAYDLGANYTYRVNDDSEMITPWARKFVDALEAMGTP-YGVVGPDSL--NNHILVHDFTHRVHMDIFEGQYYPEALTDWYVDDWISRVYGRRRTIRAKNCQVEHHTGAHGQRYKADTSKAGKVDGLIEAGTKRIVLWAEAHGA 1308 A A + E A EC M +V +WG S A+Q RW + C+ +++ GR R P RP+ S ++AV A + RG+ + + + SL + ++ +I YDVGD FFD+ + A W E + P + G+ L+R N ++KPGPVF + AA + GA Y YRVNDD+E + PW + +L + P GVVGP N IL HD HR H+ IFE YYP L+DW++DDWI+ VYG RR + V HHTGAHGQRY D + + G ++ G +RI W + A Sbjct: 66 AGAPQAEGTAAECAKMRLEHLVVVGVAWGTLSAAKQMRWTRLGCDMLLQSPFEADVAATGAVSEVFLQRYRSNHRTALAGREAARRIP-----RPTNRSAIVVAVAASAANRGLWRVRRAAASHRAGWTTSLSSASSSPRSFGPSAGPLPRHRLSAAAWRLRRQLELRVYIAYDVGDAFFDSRATEAAARVWLEARLVAPLRAAGIATRHALLRFPNPLRKPGPVFNFMMAAAAEDGAEYLYRVNDDTEFVDPWVEPAIRSLRSYSPPNVGVVGPVCAEGNAKILTHDLVHRHHLSIFEF-YYPPVLSDWWMDDWITHVYGTRRFTKGP-FSVRHHTGAHGQRYAVDNAHKAALRGELQRGRQRIEAWVRSSAA 432 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1055.563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1055.563.1 >prot_F-serratus_M_contig1055.563.1 ID=prot_F-serratus_M_contig1055.563.1|Name=mRNA_F-serratus_M_contig1055.563.1|organism=Fucus serratus male|type=polypeptide|length=462bp MCMRTKVLLAVFLLVNALVLVNLRVPLFLVGRNRVWRSRESSWGADGTPEback to top mRNA from alignment at F-serratus_M_contig1055:29551..38192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1055.563.1 ID=mRNA_F-serratus_M_contig1055.563.1|Name=mRNA_F-serratus_M_contig1055.563.1|organism=Fucus serratus male|type=mRNA|length=8642bp|location=Sequence derived from alignment at F-serratus_M_contig1055:29551..38192- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1055:29551..38192- >mRNA_F-serratus_M_contig1055.563.1 ID=mRNA_F-serratus_M_contig1055.563.1|Name=mRNA_F-serratus_M_contig1055.563.1|organism=Fucus serratus male|type=CDS|length=2772bp|location=Sequence derived from alignment at F-serratus_M_contig1055:29551..38192- (Fucus serratus male)back to top |