mRNA_F-serratus_M_contig1054.558.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1054.558.1 vs. uniprot
Match: A0A1Z5JTT4_FISSO (NACHT domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTT4_FISSO) HSP 1 Score: 100 bits (248), Expect = 3.690e-17 Identity = 119/460 (25.87%), Postives = 195/460 (42.39%), Query Frame = 2 Query: 281 EGQHLLAFFYSNPLVYEYTDEGSGRVVKKEEVEPLDHQEERQMIENSLSDLRRQIQFCSEPATVSNVRERLNSGCKMLHFTGHGGSEYLLFEDGEARRCGIAKTLNEEQLKVLFQAGATKPELVVLPSAS-SQTHGTTLTNAGVPHVVAVKSDADVPDEAARIFSQAFYHALMAPKQTVQDAFDIAV----STVNIK-APTAAATFILLPPEGDHEVRMFDDLP-----------------------EGGIVNVTPQ----------------LPPTFRLPKGRRKYFGAVELQRAVQVLQDPNAICVSIIGEPGVGKTERALQACHYVRER-----AGFDAIFFADCKQAVISSPHPFPPMEGSRTEIERPYKQHFCRLIGSALGIPLRPFPSVQALWDFMLESAIKEI--GQRPYKILLVLDSVDILYEAGGTEARKSMIAILDELCCTSENLTLLLT 1504 E +++ +S PLVY +G R + + L+ ER+++ L + R I+ + AT + + C LH++GHG ++L FE+ G A+ + K L Q ++ P V SA S G T +AGVPHVV + + ++ D AA F++ FY AL A TV+++F+ +T N+K A F+LLP +GDH+V +F+ P +G + +V + PP F L GR VE+ + ++ I S++GEPG+G++ CHY+ ER + I+F K+ K F LI + L + + + E+ I+ I G + K LLV D VD+L + T+ +L EL ++++ +LLT Sbjct: 1630 EIDNVITVLFSAPLVYR---DGQKRF---QPFKKLNFDMERELMWQCLKEASRDIELTFDNATSERLLATIAKRCSCLHYSGHGHVQFLPFEN----TTGGAEWFAVSKFKELIQNESSVPFRFVFVSACHSGLAGETFASAGVPHVVCCQQEYELKDTAALAFTRQFYLAL-AVGNTVKESFEQGCRAVRATPNLKDAENEMKKFLLLPRDGDHDVPIFNAKPVREWPRVLSEEAKRLRRNSRYNKKGSLPSVALRNLELNVRNLIQDDPSPTPPQFFL--GRE-----VEMYHVLNLVLSKRLI--SVVGEPGIGRSSLVCSLCHYINERRNLISTSIEKIYFVKAKKFKK--------------------KSRFVALIKTLLKRLVDEGKVQEVADEDDKETVIEAICGGLKKMKALLVFDRVDLLDD---TDDLTEFPMLLSELIRETKDVKILLT 2046
BLAST of mRNA_F-serratus_M_contig1054.558.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE) HSP 1 Score: 91.7 bits (226), Expect = 3.760e-17 Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 3090 LRTAHHKLLLRIIGFRRKDPMGCKPLSYREVVERTASERIETTVRKRQLGFAGALVRQGDSRLPKRVMFGLLAVQG-PKRGGRPATSWVDFL*KNFEAFRAV 3392 LR+AHH++LLR+IGF+R+ LSY + + T E IETT+RKR+L FAGA+VRQ + RLP R+MFG +A G PK GG+P T W + ++ F+A Sbjct: 27 LRSAHHEVLLRVIGFQRRLRTDHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLPSRLMFGTIAGGGSPKPGGQPKT-WPRAIAEDLRVFKAT 127
BLAST of mRNA_F-serratus_M_contig1054.558.1 vs. uniprot
Match: A0A1V9ZNY6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNY6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.440e-16 Identity = 113/421 (26.84%), Postives = 179/421 (42.52%), Query Frame = 2 Query: 437 RQIQFCSEPATVSNVRERLNSGCKMLHFTGHGGSEYLLFEDGEARRCGIAKTLNEEQLKVLFQAGATKP-ELVVLPSASSQTHGTTLTNAGVPHVVAVKSDADVPDEAARIFSQAFYHALMAPKQTVQDAFDIAVSTVNI-----------KAPTAAATFILLPPEGDHEVRMFDDLPEGGIVNVTPQLPPTFRLPKGRRKYFGAVELQRAVQVLQDPNAIC------------VSIIGEPGVGKTERALQACHYVRER----AGFDAIFFADCKQAVISSPHPFPPMEGSRTEIERPYKQHFCRLIGSALGIPLRPFPSVQALWDFMLESAIKEIGQRPY-KILLVLDSVDILYEAGGTEARKSMIAILDELCCTSENLTLLLTCKKQLLRDRAE-YIGRTKELVHEVHPLKGGDPASLL 1609 R+I + AT N + + GC+ LHF+GHG + L FED E+ ++ E+L+ F G++ P LVV+ + SQ T G+PHV+AVK + + D+AA +F++ FY L K +V ++FDI ++V K +AA+ F LLP DH +F + E + + Q+P T R P +V Q D IC V I+G GVGKT+ + Y+ R AG ++ + +++ + + + + R F +++ L A E Y LLVLD VD L G E M I + +C +L L++T +KQ++ + + GR + +H K G LL Sbjct: 344 REIDLNVQFATSINFQTMMTLGCRALHFSGHGSPKCLYFEDQES----AVHPMSTEELR-RFHGGSSSPLRLVVVQACHSQYCATAFLACGIPHVIAVKVEERLEDQAAIVFTKNFYLGLGQGK-SVAESFDIGRNSVATFPHLAHAAKVCKVYSAASKFQLLPEGNDHSEIIFPMI-EMPLEDYQSQVPVTDRFPTIWSSKLPSV-CQHFRHRETDQYYICAHFSMTNQSQRFVWIVGPAGVGKTQLSYSVARYLGARKYFPAGIKFVYVSKLADDDMATHN------------------------NNTISLGPRVFSAIKNRVQLWLSRAFDEQKSTSYFNGLLVLDGVDALL---GREENDFMKWI-ETICTQYSSLRLIVTARKQVVSSVFQIHAGR----MQHIHSFKPGQAVDLL 724
BLAST of mRNA_F-serratus_M_contig1054.558.1 vs. uniprot
Match: A0A8K1FMT0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMT0_PYTOL) HSP 1 Score: 97.8 bits (242), Expect = 1.590e-16 Identity = 143/594 (24.07%), Postives = 237/594 (39.90%), Query Frame = 2 Query: 296 LAFFYSNPLVYEYTDEGSGRVVKKEEVEP---LDHQEERQMIENSLSDLRRQIQFCSEPATVSNVRERLNSGCKMLHFTGHGG-----SEYLLFEDGEARRCGIAKTLNEEQLKVLFQAG-----ATKP-------------------------------------------ELVVLPSASSQTHGTTLTNAGVPHVVAVKSDADVPDEAARIFSQAFYHALMAPKQTVQDAFDIAVSTVN--IKAPTAAAT-FILLPPEGDH------------------EVR---------------MFDDLPEGGIVNVTPQLPPTFRLPKGRRKYFGAVELQRAVQVLQDPNAICVSIIGEPGVGKTERALQACHYVRERAGF-DAIFFADCKQAVISSPHPFPPMEGSRTEIERPYKQHFCRLIGSALGIPLRPFPSVQALWDFMLESAIKEIGQRPYKILLVLDSVDILYEAGGTEARKSMIAILDELCCTSENLTLLLTCKKQLLRDRAEYIGRTKELVHEVHPLKGGDPASLLLDLSPRD---SGVTFTEVNAKKDCGDIDLVEHILKLELMKVVGGHPGTLCLVGPLLLDSKFND 1789 LA YS P V + + + ++P L+ +E+ + + +R I ATV ++R+ L+ G +LHF+GHGG ++ LLFED +R G+A ++ L+ + G A+ P +LV + S S+ G AGV HVV V+S + D+A+ +FS AFYHA++A K T+ AF+IA V+ ++ P FILL H EV +F D+ G V+V+P + LP + G + + L + V++ G PG+GK+ +++ H++ ER F D + F + + S +EG T I+ SAL FP + L+ + E+ K+LLV+D+++ A R+ ++ +L + NL L+T ++ + A + E V ++ L A L L SPR S + + A ++E + LM + GHP + L PLL D ++ Sbjct: 142 LALLYSLPFVASESSGSASNGSRHHRLKPVPALNIAQEQNSLNKIFQECQRAIHTMRAAATVDSLRKVLDRGVTVLHFSGHGGRIAGKTDCLLFED--TQRTGLAHFIDAATLRSILNGGVASGSASPPPSSAFTGLAREDSAEDDGASADGHSSTRSIASSYSRIGLGGTLKLVFVSSCHSKEVGEVFIQAGVQHVVCVRSGDKILDDASAMFSYAFYHAVLAGK-TIYQAFEIARVRVSADMQIPDHEGDKFILLESSQVHADSCPLYDSSSDDTPYAIEVNFASNPCTCHASTMHFVFSDISAGKWVDVSPANRFSKTLPAIPESFVGREQELHMLAGLVNSQRF-VTMRGPPGIGKSTLSIRLAHFLAERNVFPDGVAFIRLRG--VQS------LEGVETAIK------------SAL------FPDGGREKELPLQQTLAEM-----KVLLVMDNMEDPINANPLPVREFLLHLLQN----TPNLAFLMTARQAMGGGIAGF----DEKVVSLNRLSHFHAADLFLKKSPRALLLSEIGDIDAKASTHSRTASVLEALTSHPLMAFLDGHPQAISLCAPLLQDRSLSE 692
BLAST of mRNA_F-serratus_M_contig1054.558.1 vs. uniprot
Match: A0A6H5KXM6_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM6_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 2.300e-16 Identity = 113/404 (27.97%), Postives = 179/404 (44.31%), Query Frame = 2 Query: 644 ELVVLPSASSQTHGTTLTNAGVPHVVAVKSDADVPDEAARIFSQAFYHALMAPKQTVQDAFDIAVSTVN-IKAPTAAATFI------------------------LLPPEGDHEVRMFDDLPEGGIVNVTPQLPPTFRLPKGRRKYFG-AVELQRAVQVLQDPNAICVSIIGEPGVGKTERALQACHYVRERAGFDAIFFADCKQAVISSPHPFPPMEGSRTEIERPYKQHFCRLIGSAL-GIPLRPFPSVQALWDFMLESAIKEIGQRPYK-ILLVLDSVDILYEAGGTEA---RKSMIAILDELCCTSENLTLLLT--CKKQLLRDRAEYIGRTKELVHEVHPLKGGDPASLLL-----DLSPRDSGVTFTEVNAKKDCGDIDLVEHILKLELMKVVGGHPG 1741 +LV L S SQ+ AGV HV+AVK D+ V D A F+++FY +L+ TV+ AF + + + P F+ LLP EGDH++ +F+++P+G V+ TP PP +R + ++G AV++Q+ V+ + CV+I G+ G+GKT+ L+AC Y RER F IFF +AV + + +E+ ++ L+ + G+ + V+ L A+KE G P + LLVLD G E + + ++D L LT +T K + R +G E V PL A L + +LS + G + E + G D E K +++ + GHPG Sbjct: 286 QLVFLSSCHSQSVAKCFIEAGVRHVIAVKKDSKVLDHKAAEFAKSFYASLLRG-DTVRRAFLLGSACLEGSDQPEEGHKFLSVRPWRRPGSLSAVADSHFYDSLPLLPLEGDHDIPVFEEVPDGQFVDATPLKPP-YRCDAVTQYFWGRAVDVQKVVKHMVS-GVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGN--------DACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDLLQ-----ALKEQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGR---VGVPGEKTVVVKPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTE-GKADSYESFAKSDIVLALRGHPG 669 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1054.558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1054.558.1 >prot_F-serratus_M_contig1054.558.1 ID=prot_F-serratus_M_contig1054.558.1|Name=mRNA_F-serratus_M_contig1054.558.1|organism=Fucus serratus male|type=polypeptide|length=927bp MAEVHQGSDEEGQHLLAFFYSNPLVYEYTDEGSGRVVKKEEVEPLDHQEEback to top mRNA from alignment at F-serratus_M_contig1054:78465..135979+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1054.558.1 ID=mRNA_F-serratus_M_contig1054.558.1|Name=mRNA_F-serratus_M_contig1054.558.1|organism=Fucus serratus male|type=mRNA|length=57515bp|location=Sequence derived from alignment at F-serratus_M_contig1054:78465..135979+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1054:78465..135979+ >mRNA_F-serratus_M_contig1054.558.1 ID=mRNA_F-serratus_M_contig1054.558.1|Name=mRNA_F-serratus_M_contig1054.558.1|organism=Fucus serratus male|type=CDS|length=5562bp|location=Sequence derived from alignment at F-serratus_M_contig1054:78465..135979+ (Fucus serratus male)back to top |