mRNA_F-serratus_M_contig1053.557.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5JND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND4_9PHAE) HSP 1 Score: 156 bits (394), Expect = 4.130e-41 Identity = 104/321 (32.40%), Postives = 154/321 (47.98%), Query Frame = 1 Query: 4 LYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKME--MEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYA------------------------------------LLDGI----------------GVSQEH-------------NLAGSEKASYNALTLGTVEYKRN---DDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756 L R H +P+TSF+LSNE+Y YPD VCLY GCD ++ + E C+ S ++TE GP+TA YR E + TD VWI +A + + S+ + G + +CV+F S +EYKLGE+R ++Y+DY L D + S+ H L G+ SY A T+ + Y + +DI+ I PYA++ + ++Q +S+ ITE P+++ E+LG +GGFWD++L+ WP+ FV SQ P LKPR+FRKS R Sbjct: 34 LSRLHHQYLDPSTSFSLSNEVYRYPDFGVCLYKENGCDSLDGHIAEGCVTSSNSTEFGPSTAEYR---------GQELSPTDGVWIPDTAEEWDKRQDISVDPR-FTGPEKK--YCVLFNMSEIEYKLGEERVQENYLDYTNLRMAWYPSGSKENDSNTCTTDLASLVPHSMSVVIHLFDEVTDTIANGFQVAYTCRTNTSKSHMFTDVVLALTETKKLDGTTDRSYRAETIYSNPYVSDQVGEDISNITRPYAFIDLRIKQGPNSLEFITEDSPVSIGELLGDIGGFWDVLLLLWPVFFVVVSQQDPTLKPRDFRKSLQR 342
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.260e-31 Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 430 GIGVSQEHNLAGSEKASYNALTLGTVEYK--RNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMR-----DPPRTTFHDELDEELPTWE 882 GIG+++E L + ASY AL + + YK R D+ITGI +PYA++ ME+ Q +DS+ ITEI+PL +AE+ G VGGFWDL+L+ WPI F++AS+ P+LK RNF+KS R ++V L + ++ A+ R ++ DE +E P WE Sbjct: 14 GIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVD----LTRRVNNATPYRVRRKAGDRKSNATDEDEERPPAWE 167
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE) HSP 1 Score: 116 bits (291), Expect = 8.830e-28 Identity = 69/158 (43.67%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 430 GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEK-------VASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE 882 GIG++ + G +SY A+++ + YK D I PYA + MEL+Q+ DS ITE DP AEILG +GGFWDLILI WP+ FVAASQ PNLKPRNF KS R E+ VA+ GP ++ + + D L EE WE Sbjct: 48 GIGLTNQIKYTGDIISSYKAVSINSGVYKDQAD-GDITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSFTRTVERFSGMTKTVANSGP--MRRIESIEMRNGTSGASLEDGLQEEPVPWE 202
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI) HSP 1 Score: 115 bits (288), Expect = 7.410e-26 Identity = 60/153 (39.22%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 430 GIGVSQEHNLAGSEKASYNAL--TLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE 882 GIG++ ++ + +SY AL G + N ++T PYA++ +E++Q++DS ITE +P AE+ G +GGFWDL+LI WP+CFV A+Q P+LKPR F+KS +R E+ A V + + V + P F D+ EE+P WE Sbjct: 244 GIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPVRHSNAMPGVDGFEDQ--EEVPAWE 391
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LT44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT44_ECTSI) HSP 1 Score: 108 bits (270), Expect = 3.710e-24 Identity = 58/142 (40.85%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 4 LYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD 429 LYRG+ R++P T+F LSN IY YPDLWVCLY NYGCD+ME++EEC+ S + TEGG T A + PG E I E I +D + +CV +ETS + LG++ + +Y+D+ LLD Sbjct: 34 LYRGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEMELQEECVNSSNATEGGETLAVFYPGGEYEQVIPGEQ-------------ILSKDKGF---------------FCVEYETSTITTFLGQEPETGEYLDHILLD 147
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.170e-22 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 430 GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756 GIGV+ E L A+ AL++ T + R+ I PYA + ++ QQE +S+ ITE DP ++AE+ G VGGFWDL+++ WPI FVAAS+ P+LKPRNF+KS + Sbjct: 169 GIGVTIEERLGEEPVATNKALSVSTATH-RDKVNAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAK 276
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D7G5W1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W1_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 4.900e-20 Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 433 IGVSQEHNLAGSEKASYNALTLGTVEYKRN---DDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756 + +++ L G+ + SY A T+ + Y + ++I+ I PYA++ + ++Q +S+ +ITE P+ + E+LG +GGFWD++L+ WP+ FV SQ P LKPRNFRKS R Sbjct: 91 LALTETKKLDGTTERSYRADTIYSYPYVSDQVGENISSITRPYAFIDLRIKQGPNSLETITEDAPVTIGELLGDIGGFWDILLLLWPVFFVVVSQEEPTLKPRNFRKSLQR 201
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ2_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 2.160e-19 Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 52 LSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD 429 +++E+Y YPDLWVCLYNNYGCD+ E+EE C+ S TEGG A + P + + T T+ + I E+ + NY+ R G CV+F+TS+ +G++RDP +Y+DY LD Sbjct: 1 MTSEVYKYPDLWVCLYNNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLD---QLQETTTEELQIEAIP----ENTDFDSEG-NYVEDGR--GQCVIFKTSSATAFVGQERDPHEYLDYIHLD 116
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP9_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 1.410e-17 Identity = 53/139 (38.13%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 40 TSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRP----GDANETT-----INFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD 429 T NE+Y PDLW+CL+ NYGCD+ E+E++C+ S TEGG A + P G ETT I P TD S ++ED RG CVVF+TSA +G++RDP +++DY LD Sbjct: 4 TPLYFQNEVYKNPDLWICLFVNYGCDEWELEKQCVHSAWMTEGGEPDAVFYPRVKLGQEQETTTEQLQIEAIPENTD----FDSEGNYVED---------------GRGQCVVFKTSAATAFVGQERDPHEFLDYVHLD 123
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5K3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L2_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 3.910e-17 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 565 MELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASV 780 ME++Q+ DS+ I E+DP+ AEI+G +GGF DLILI WPI FVA S+ P+LKPRNF+KS R E+ + V Sbjct: 1 MEIKQQFDSLEVIKELDPIEFAEIIGNIGGFRDLILILWPIFFVAISRPEPHLKPRNFKKSVARTVERASGV 72 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1053.557.1 >prot_F-serratus_M_contig1053.557.1 ID=prot_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=polypeptide|length=294bp LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSback to top mRNA from alignment at F-serratus_M_contig1053:174448..179545+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1053.557.1 ID=mRNA_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=mRNA|length=5098bp|location=Sequence derived from alignment at F-serratus_M_contig1053:174448..179545+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1053:174448..179545+ >mRNA_F-serratus_M_contig1053.557.1 ID=mRNA_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=CDS|length=1764bp|location=Sequence derived from alignment at F-serratus_M_contig1053:174448..179545+ (Fucus serratus male)back to top |