mRNA_F-serratus_M_contig1053.557.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1053.557.1
Unique NamemRNA_F-serratus_M_contig1053.557.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5JND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND4_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 4.130e-41
Identity = 104/321 (32.40%), Postives = 154/321 (47.98%), Query Frame = 1
Query:    4 LYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKME--MEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYA------------------------------------LLDGI----------------GVSQEH-------------NLAGSEKASYNALTLGTVEYKRN---DDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756
            L R  H   +P+TSF+LSNE+Y YPD  VCLY   GCD ++  + E C+ S ++TE GP+TA YR           E + TD VWI  +A  + +    S+    + G  +   +CV+F  S +EYKLGE+R  ++Y+DY                                     L D +                  S+ H              L G+   SY A T+ +  Y  +   +DI+ I  PYA++ + ++Q  +S+  ITE  P+++ E+LG +GGFWD++L+ WP+ FV  SQ  P LKPR+FRKS  R
Sbjct:   34 LSRLHHQYLDPSTSFSLSNEVYRYPDFGVCLYKENGCDSLDGHIAEGCVTSSNSTEFGPSTAEYR---------GQELSPTDGVWIPDTAEEWDKRQDISVDPR-FTGPEKK--YCVLFNMSEIEYKLGEERVQENYLDYTNLRMAWYPSGSKENDSNTCTTDLASLVPHSMSVVIHLFDEVTDTIANGFQVAYTCRTNTSKSHMFTDVVLALTETKKLDGTTDRSYRAETIYSNPYVSDQVGEDISNITRPYAFIDLRIKQGPNSLEFITEDSPVSIGELLGDIGGFWDVLLLLWPVFFVVVSQQDPTLKPRDFRKSLQR 342          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.260e-31
Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = 1
Query:  430 GIGVSQEHNLAGSEKASYNALTLGTVEYK--RNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMR-----DPPRTTFHDELDEELPTWE 882
            GIG+++E  L   + ASY AL + +  YK  R D+ITGI +PYA++ ME+ Q +DS+  ITEI+PL +AE+ G VGGFWDL+L+ WPI F++AS+  P+LK RNF+KS  R  ++V      L + ++ A+  R        ++   DE +E  P WE
Sbjct:   14 GIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVD----LTRRVNNATPYRVRRKAGDRKSNATDEDEERPPAWE 167          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 8.830e-28
Identity = 69/158 (43.67%), Postives = 88/158 (55.70%), Query Frame = 1
Query:  430 GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEK-------VASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE 882
            GIG++ +    G   +SY A+++ +  YK   D   I  PYA + MEL+Q+ DS   ITE DP   AEILG +GGFWDLILI WP+ FVAASQ  PNLKPRNF KS  R  E+       VA+ GP  ++ +            +  D L EE   WE
Sbjct:   48 GIGLTNQIKYTGDIISSYKAVSINSGVYKDQAD-GDITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSFTRTVERFSGMTKTVANSGP--MRRIESIEMRNGTSGASLEDGLQEEPVPWE 202          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 7.410e-26
Identity = 60/153 (39.22%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  430 GIGVSQEHNLAGSEKASYNAL--TLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE 882
            GIG++ ++     + +SY AL    G  +   N ++T    PYA++ +E++Q++DS   ITE +P   AE+ G +GGFWDL+LI WP+CFV A+Q  P+LKPR F+KS +R  E+ A V   + +   V  +   P    F D+  EE+P WE
Sbjct:  244 GIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPVRHSNAMPGVDGFEDQ--EEVPAWE 391          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LT44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT44_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.710e-24
Identity = 58/142 (40.85%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    4 LYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD 429
            LYRG+  R++P T+F LSN IY YPDLWVCLY NYGCD+ME++EEC+ S + TEGG T A + PG   E  I  E              I  +D  +               +CV +ETS +   LG++ +  +Y+D+ LLD
Sbjct:   34 LYRGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEMELQEECVNSSNATEGGETLAVFYPGGEYEQVIPGEQ-------------ILSKDKGF---------------FCVEYETSTITTFLGQEPETGEYLDHILLD 147          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.170e-22
Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1
Query:  430 GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756
            GIGV+ E  L     A+  AL++ T  + R+     I  PYA + ++ QQE +S+  ITE DP ++AE+ G VGGFWDL+++ WPI FVAAS+  P+LKPRNF+KS  +
Sbjct:  169 GIGVTIEERLGEEPVATNKALSVSTATH-RDKVNAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAK 276          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D7G5W1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W1_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 4.900e-20
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 1
Query:  433 IGVSQEHNLAGSEKASYNALTLGTVEYKRN---DDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756
            + +++   L G+ + SY A T+ +  Y  +   ++I+ I  PYA++ + ++Q  +S+ +ITE  P+ + E+LG +GGFWD++L+ WP+ FV  SQ  P LKPRNFRKS  R
Sbjct:   91 LALTETKKLDGTTERSYRADTIYSYPYVSDQVGENISSITRPYAFIDLRIKQGPNSLETITEDAPVTIGELLGDIGGFWDILLLLWPVFFVVVSQEEPTLKPRNFRKSLQR 201          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ2_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.160e-19
Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 1
Query:   52 LSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD 429
            +++E+Y YPDLWVCLYNNYGCD+ E+EE C+ S   TEGG   A + P    +     + T T+ + I        E+  +     NY+   R  G CV+F+TS+    +G++RDP +Y+DY  LD
Sbjct:    1 MTSEVYKYPDLWVCLYNNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLD---QLQETTTEELQIEAIP----ENTDFDSEG-NYVEDGR--GQCVIFKTSSATAFVGQERDPHEYLDYIHLD 116          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP9_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.410e-17
Identity = 53/139 (38.13%), Postives = 71/139 (51.08%), Query Frame = 1
Query:   40 TSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRP----GDANETT-----INFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD 429
            T     NE+Y  PDLW+CL+ NYGCD+ E+E++C+ S   TEGG   A + P    G   ETT     I   P  TD      S   ++ED                RG CVVF+TSA    +G++RDP +++DY  LD
Sbjct:    4 TPLYFQNEVYKNPDLWICLFVNYGCDEWELEKQCVHSAWMTEGGEPDAVFYPRVKLGQEQETTTEQLQIEAIPENTD----FDSEGNYVED---------------GRGQCVVFKTSAATAFVGQERDPHEFLDYVHLD 123          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5K3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L2_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.910e-17
Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  565 MELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASV 780
            ME++Q+ DS+  I E+DP+  AEI+G +GGF DLILI WPI FVA S+  P+LKPRNF+KS  R  E+ + V
Sbjct:    1 MEIKQQFDSLEVIKELDPIEFAEIIGNIGGFRDLILILWPIFFVAISRPEPHLKPRNFKKSVARTVERASGV 72          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JND4_9PHAE4.130e-4132.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU22_ECTSI1.260e-3143.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF84_9PHAE8.830e-2843.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ3_ECTSI7.410e-2639.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LT44_ECTSI3.710e-2440.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6D1_9PHAE2.170e-2246.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5W1_ECTSI4.900e-2039.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ2_ECTSI2.160e-1939.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP9_ECTSI1.410e-1738.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3L2_9PHAE3.910e-1755.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1053contigF-serratus_M_contig1053:174448..179545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size882
Cds size882
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1053.557.1prot_F-serratus_M_contig1053.557.1Fucus serratus malepolypeptideF-serratus_M_contig1053 174448..179545 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928885.6918204-CDS-F-serratus_M_contig1053:174447..1745041622928885.6918204-CDS-F-serratus_M_contig1053:174447..174504Fucus serratus maleCDSF-serratus_M_contig1053 174448..174504 +
1690962615.2189639-CDS-F-serratus_M_contig1053:174447..1745041690962615.2189639-CDS-F-serratus_M_contig1053:174447..174504Fucus serratus maleCDSF-serratus_M_contig1053 174448..174504 +
1622928885.712-CDS-F-serratus_M_contig1053:174779..1750551622928885.712-CDS-F-serratus_M_contig1053:174779..175055Fucus serratus maleCDSF-serratus_M_contig1053 174780..175055 +
1690962615.23591-CDS-F-serratus_M_contig1053:174779..1750551690962615.23591-CDS-F-serratus_M_contig1053:174779..175055Fucus serratus maleCDSF-serratus_M_contig1053 174780..175055 +
1622928885.728119-CDS-F-serratus_M_contig1053:176368..1764641622928885.728119-CDS-F-serratus_M_contig1053:176368..176464Fucus serratus maleCDSF-serratus_M_contig1053 176369..176464 +
1690962615.253215-CDS-F-serratus_M_contig1053:176368..1764641690962615.253215-CDS-F-serratus_M_contig1053:176368..176464Fucus serratus maleCDSF-serratus_M_contig1053 176369..176464 +
1622928885.7757905-CDS-F-serratus_M_contig1053:178235..1783221622928885.7757905-CDS-F-serratus_M_contig1053:178235..178322Fucus serratus maleCDSF-serratus_M_contig1053 178236..178322 +
1690962615.2680538-CDS-F-serratus_M_contig1053:178235..1783221690962615.2680538-CDS-F-serratus_M_contig1053:178235..178322Fucus serratus maleCDSF-serratus_M_contig1053 178236..178322 +
1622928885.79291-CDS-F-serratus_M_contig1053:179179..1795451622928885.79291-CDS-F-serratus_M_contig1053:179179..179545Fucus serratus maleCDSF-serratus_M_contig1053 179180..179545 +
1690962615.2757397-CDS-F-serratus_M_contig1053:179179..1795451690962615.2757397-CDS-F-serratus_M_contig1053:179179..179545Fucus serratus maleCDSF-serratus_M_contig1053 179180..179545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1053.557.1

>prot_F-serratus_M_contig1053.557.1 ID=prot_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=polypeptide|length=294bp
LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMS
ISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSI
HSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLDGIGVSQE
HNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVS
ITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSA
VRAKEKVASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE
back to top

mRNA from alignment at F-serratus_M_contig1053:174448..179545+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1053.557.1 ID=mRNA_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=mRNA|length=5098bp|location=Sequence derived from alignment at F-serratus_M_contig1053:174448..179545+ (Fucus serratus male)
CTGCTGTACCGGGGCGTGCACAATCGGCAAAACCCCAATACCTCTTTTAC TCTTTCGGTGAGGTGCAGGACAATAGTTTGGATTACACTTGCTGAAAAAT TCCAATAGACGGCGACCACACCCATCGTGGTCTAGGCTATTAATAGTTCA AACGTTAAGTGAGGACAACGATAAAGCACGTGTAGGAAGCTTTCTTAGAT TTGGTAATGTTTGTTACTTTGAAGATCACATTTCAATCAACTTGTGCTCT CGACAACTGAACTGATGATGGTCTCCGTGGCCTCAACCATCGTTCCCCAA TGCGATGCCACTATTTTTGTTTGACGAAACAGAATGAAATCTACACCTAT CCAGACCTATGGGTGTGCTTGTATAACAATTACGGCTGCGACAAGATGGA GATGGAGGAGGAATGCATCATGTCCATTTCGAACACCGAGGGTGGGCCGA CGACGGCGACATACCGACCAGGCGACGCAAACGAAACGACCATCAATTTT GAGCCTACTCAAACTGATTCGGTATGGATTCACGTTTCCGCGTGTATCTT CATAGAGGACTTGAAATATAGTATACATTCTCATAATTATTTGGGTAGTA GAAGAACCGTTCTGTGAGATACGTTACAATGTCCTTGAGCAGTACCCATG AAAACATTGATCACAAATGATCGGTTTGTCTGTTGGTTGTGCTTTTCGAT GTTTTCCTCGCATTCATTTTCTTCTTCTGGCGTCTCTTAACGTGTTTAAT GGCTCTGTCGCTCAATGCTGCTTTTGATCGTACTCCCCATGAAATATATA TTTTGTTTATTGTGATGATGAAGTGTTCATTTCTCGATGCCTCTACTATT GCTCTGTGGCAACTATACTGTAGTAGTACTTATACTGTGAAGTCTGATAT TAATAGTTTATATTTTTGACTACCACCATCGCATGCAAGCATAATTTCCG CACGCTTACGTTTCAAGCGTTTAGCTGGCTCAGCTTTCAGCAGTCTGGTG ATGACTCTTCGGCTGTCCCTACAGGCCCGAAAGTGTCCTATACGTTATTC GCGCTTTACATTTGAAATGTCATATTTAGTCGTGATCCGGGTAAGAACCC CAAAAACATTTCGGGGATCTAAGCATATTATACTCCTGATTACTTTATCA TTGTTGACCAAATCACAAAGAGCTTTATGTATAAAATGCTTGTGGAGTAC GTAAACAACGTTAGATTTCGAAATTTGTGGATCAGACAAAAATAGCATAC ACAACACAAACACGATACCACCTGGCCGAGCAACACCAGGAAATGTAAAG ACATATTGTGCGGTACTTTTCGAACCATCAGCGTGGGAACGCATGCGGTT TTCCTCATCTCCTAGCAAGTGGGATGCCCGTTAAAATTCAACGCACAGCG GTCTTCCTGGCGAAGCGTTTTTGGAATTAAAGATGCTGATGCTACACTGA CGAAACGATAATATTATAGCGAAGTTGTTCAGCATTTCGACTATTATAGA GTTGCAGGTAGCGAATAGACTACTCGTGGTTTGCAGGAAAGATGTGGCGT TGTGCGGAAGTGAATTTACTAGTTCATCCAGCCGTCATTATTTTTGCTAT GTATTCCCCTGCCCCCCACACACGAGGCATGGCGCGTGATGAGTATACTA AGTCATTAATTTTAATATTATCGAGTCACCCATAAGACTTTTCGGGTGGC ACGATGCAACGATTTCCCACAATCGATCGTGTATAAATTACTCACGGAAA AATCACATCACGAACCAGGGCTTATTCACGAGTTTTATACATGGGATGTT GTTCTAAATTGGTCTGGTCTACCTTGGTGAGGTTGTCAGACGGCGTTTCG TATTGTCCGCCTAATCTCCTGCTTATCTGCCTCAACCAACAATGCGTCGC CCTTTTTCCGTCTTCAACCAGCGTGGCTGGTGCGTCGTTTTCGAGACGTC AGCTCTGGAATACAAACTTGGGGAAGACCGGGATCCCGACGACTACATTG ATTATGCTTTGCTGGATGTGAGTTGCCGGAAACGGAATAGGAAAGGTTGC TTGATAGCACACAATCACAGTTCAAACTGGCTCTGGCACAGTACCTAAGA TTCCCTTGTATCGAGTACGTTTAACGAATCAGAATATGTGTATGTTTTCT TATTTCTTGGTATTTTCAACATGCCCACTTCATACCAATAGTGGGTGTGG GAAAGAGAGGCTATTAATTGGCCCATGGTGATCTGCCAAGGCAGCACTCG TTCGAAACTACCTTGAGATTTACTGGCCCTGTGCCGGTGGACTCTTGGCA GTGAACGCTATCGGTACGCAATTGCGTGATCCGATAAGCTCGGGACTGAC CCGATGGCATATGGCGAATTCATAAATGGACGCCACCGTGGAACTTGGAA GGAATCTCGTAAGTAAGAATCAGATTCAGCCTGAATATTATGTTGATGAG CAGGCTGACGCGGGACTGGACGGCTGAACCCATCTCGCAAGACCAAATTC TCAGGCACGCACGGGGACAGGCAAATATTATTTTTCCCTGTTCAGCTGAC CACGAGCAGGATTGGCAGCCTTACCGAGTTGATCCATACTCTGCTATATG TTACGACTGTACATACATACCTGCTTTTAGGACTCGCACTCAGAGCTGTG CAGCAGCCAACAGCAATGTACCAACCTTATCGGCATAAAAACTAACAGAT GTACTGGTACCCCGGCGGAGCTGAAAACAATTCTACAACCTGCATCCAAG AGGAGGGAGCTTGGAAATCGCACTAGTAAGTGATGTATACGACGTTCGAA GTCCTGCTCGATCGAGCGCGAATAGTTTACCTAAAAAAATGCGCTTGCAA TCAAAATGTTTTGCTCTGTACTGTATAATATGTCTTATTCGTGATACGAT GATTGGATATTATGTGATGTACGAGTGGAGGCATGGTTTTGACTAACTGT TGGTATTGCGATACAATTTGGTGTGTTTGATACTAGTGACGGGTAATCAA TCGCTCTGATCTGATGAGTTCACCGCGCTAAACGTAGTTGTCAAGTCTGA AGGGTCAGCTGTCATTGAGGGCGAGATATTCCAAAACGATTGCGACGTCT TCTCAAATTTAGGGTTGGCTCTGATGCGCTGGCTTTTTGCGCCCTTTGGT TTTTAATTTTGACAGCAACACTTTCTGATCCAAGTTCAACTGTTCACACA AGACCTCTCAAGTTAAGACGCTGAACGACCCGTGCGTCCCGTCTGACGCC CCTCCCTCGATTGTGTTTCCTTCGATGATCATGCAGCGATAATGTGTTCG CCTTTTTGAACGACCCGTTAACGGGCGAAGTTTCTGCGGGGATTCAAATC CCGTACTCGTGCATGACGAATGAATCCAGCGGCCACTATTTCACATACGT GGTAAGCACCACACTGAAAGTGATATAGCAACGCTTGCCAGGTACTAGCG ATCGCCGCCGCCCTGCGAGTAGCGCAAGAAACAAACGTCTAGACCTTTCG ATTTTGTGTGTCGACTGGTATTGGTTGATGATTGGTTGGTAGTGCTCCTT GTCGCCCCAGTAAACCTGACGCGCCCATGTGCATTAGGGTATTTCAGACA TCTTGAGTAGATCTGACACCACAAGTAAGTTTTATATGTCGTATGCCGCC GGAAACTTGCTAGCGACCGAAGGGGCTTTCGAAACGTTACAAATGAATAC GCGGGATATTTTCCACCATTTAGTCTCTTGTTGTTAGCATCTGCCGTAGC CACCAATAAAGAACGTTGTAAACACGCCAAACCATCAGGGGATTGGGGTT TCCCAGGAGCACAACCTCGCTGGTTCAGAGAAAGCATCGTACAACGCTCT GACTCTAGGAACGGTGGAGTATAAGGTCGAGGTAAGCGCAGTTTCCTCCG CATTGATCTCCATTGCACACTAGACGTAGATGCTTTAACTTCGGAACATT TTATTTGTTACAAAGGCAAATCATTATGGTAATATTAGCAGTTGGTTGTG TTCAAGCTTTACTGGCAGCCACACATCCCGCAGATATTGACATTTTGTAA CGAGTTCGAGTAGGAAGTATCACATAATGGTGGAGCTTCACACGATCCTG AAAACAGAGTTTGGCAAGTGAAACGGAGCCCAGTTCTTGGTCAACTGTGT TGATGCGCACCAACGAGGGTACACACTGTGTAGCCTGTCGCTCTATAGAT GTTTCAGCGATCGCACCACGGGGTGTAGGTTCGAGAGAATTGCTTCAAAA CCGTGCAATACATTACGAAAAACAGGCCAAATTGCGAAGGAAGTCAAGTT GGTAACAAACCTTACCAAATGTGTAAAGTTTGAGCTCGAACCGGTGACGT TTTTTCCACAACTCGATCGAGTTGTAACTCTTTTAGTTGTTTTTTGCGAC TCGCTTGTATTTAAAGAAGGAATACGACACTATTTTCTGGGCCCTTTTCG AGGATCCCTCTAAAAAACTAAACTCGGGCTTTTTACAGTCCGTACGATAT ACATGGGAATTAAAAAGGATTTAAATTGTTACGGCATGCGTCGTGCAAGG CATACGTCGGGGAACTTTATGTAAGGTTCAAATAACAATTATGTTTTGGC CTGGAGCCTGAGTCTAGAATCCAACCCCCATTCAAAGGAGACCGTGTATG GTGTTGATGATGCCCATGAAAAGTGCGCACGAGCTTGATCCCGCCCGCCT TTCCCTGTGGACCTGTCATTTTTGTCTGACAGAGAAATGACGACATTACG GGGATACAAGCTCCATACGCGTACATGAAAATGGAACTGCAACAGGAATC AGATTCGATGGTGTCGATCACGGAGATAGATCCACTCAATATGGCCGAAA TATTAGGCCAGGTTGGAGGATTCTGGGATCTGATCCTGATATTTTGGCCA ATTTGTTTCGTGGCCGCTAGTCAAGGAGCCCCGAACCTGAAGCCCCGCAA CTTTCGGAAGTCTGCCGTCCGGGCAAAGGAGAAAGTCGCATCTGTTGGGC CAGCGTTACTCCAGAATTTGTCAGTAGCGTCCACGATGAGAGACCCACCA CGAACCACATTTCACGACGAATTAGATGAAGAGTTACCTACCTGGGAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1053:174448..179545+

>mRNA_F-serratus_M_contig1053.557.1 ID=mRNA_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=CDS|length=1764bp|location=Sequence derived from alignment at F-serratus_M_contig1053:174448..179545+ (Fucus serratus male)
CTGCTGTACCGGGGCGTGCACAATCGGCAAAACCCCAATACCTCTTTTAC
TCTTTCGCTGCTGTACCGGGGCGTGCACAATCGGCAAAACCCCAATACCT
CTTTTACTCTTTCGAATGAAATCTACACCTATCCAGACCTATGGGTGTGC
TTGTATAACAATTACGGCTGCGACAAGATGGAGATGGAGGAGGAATGCAT
CATGTCCATTTCGAACACCGAGGGTGGGCCGACGACGGCGACATACCGAC
CAGGCGACGCAAACGAAACGACCATCAATTTTGAGCCTACTCAAACTGAT
TCGGTATGGATTCACGTTTCCGCGTGTATCTTCATAGAGGACTTGAAATA
TAGTATACATTCTCATAATTATTTGGGTAGTAGAAGAACCAATGAAATCT
ACACCTATCCAGACCTATGGGTGTGCTTGTATAACAATTACGGCTGCGAC
AAGATGGAGATGGAGGAGGAATGCATCATGTCCATTTCGAACACCGAGGG
TGGGCCGACGACGGCGACATACCGACCAGGCGACGCAAACGAAACGACCA
TCAATTTTGAGCCTACTCAAACTGATTCGGTATGGATTCACGTTTCCGCG
TGTATCTTCATAGAGGACTTGAAATATAGTATACATTCTCATAATTATTT
GGGTAGTAGAAGAACCCGTGGCTGGTGCGTCGTTTTCGAGACGTCAGCTC
TGGAATACAAACTTGGGGAAGACCGGGATCCCGACGACTACATTGATTAT
GCTTTGCTGGATCGTGGCTGGTGCGTCGTTTTCGAGACGTCAGCTCTGGA
ATACAAACTTGGGGAAGACCGGGATCCCGACGACTACATTGATTATGCTT
TGCTGGATGGGATTGGGGTTTCCCAGGAGCACAACCTCGCTGGTTCAGAG
AAAGCATCGTACAACGCTCTGACTCTAGGAACGGTGGAGTATAAGGGGAT
TGGGGTTTCCCAGGAGCACAACCTCGCTGGTTCAGAGAAAGCATCGTACA
ACGCTCTGACTCTAGGAACGGTGGAGTATAAGAGAAATGACGACATTACG
GGGATACAAGCTCCATACGCGTACATGAAAATGGAACTGCAACAGGAATC
AGATTCGATGGTGTCGATCACGGAGATAGATCCACTCAATATGGCCGAAA
TATTAGGCCAGGTTGGAGGATTCTGGGATCTGATCCTGATATTTTGGCCA
ATTTGTTTCGTGGCCGCTAGTCAAGGAGCCCCGAACCTGAAGCCCCGCAA
CTTTCGGAAGTCTGCCGTCCGGGCAAAGGAGAAAGTCGCATCTGTTGGGC
CAGCGTTACTCCAGAATTTGTCAGTAGCGTCCACGATGAGAGACCCACCA
CGAACCACATTTCACGACGAATTAGATGAAGAGTTACCTACCTGGGAGAG
AAATGACGACATTACGGGGATACAAGCTCCATACGCGTACATGAAAATGG
AACTGCAACAGGAATCAGATTCGATGGTGTCGATCACGGAGATAGATCCA
CTCAATATGGCCGAAATATTAGGCCAGGTTGGAGGATTCTGGGATCTGAT
CCTGATATTTTGGCCAATTTGTTTCGTGGCCGCTAGTCAAGGAGCCCCGA
ACCTGAAGCCCCGCAACTTTCGGAAGTCTGCCGTCCGGGCAAAGGAGAAA
GTCGCATCTGTTGGGCCAGCGTTACTCCAGAATTTGTCAGTAGCGTCCAC
GATGAGAGACCCACCACGAACCACATTTCACGACGAATTAGATGAAGAGT
TACCTACCTGGGAG
back to top