mRNA_F-serratus_M_contig1053.557.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1053.557.1
Unique NamemRNA_F-serratus_M_contig1053.557.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ1_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 3.260e-67
Identity = 122/303 (40.26%), Postives = 178/303 (58.75%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLDGIGVSQEHNLAGSEKASYNALTLGTVEYKR--NDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSV-------ASTMRDPPRTTFHDELDEELPTWE 882
            L Y+     ++P+TSF L+NE+Y  PDLW+CLYNNYGCD+ E+EEEC+ S   TEGG   A + P    +     + T T+ + I        E+  Y     NY+   R  G CV+F TSA    +G++RDP +Y+DY  LDG+G++ ++ L   +++SY AL      +K   N +IT    PYAY+ +E++Q++DS   ITE +P   AE+ G +GGFWDL+LI WP+CFVA +Q  P+LKPR F+KS VR  E+ A V   + +   +       A+++ D     F D+  EE+P WE
Sbjct:   33 LFYKAAEKAKSPDTSFVLTNEVYKNPDLWICLYNNYGCDEWELEEECVDSAWMTEGGEPDAVFYPRVKLD---QLQETTTEELQIEAIP----ENTDYDSEG-NYVEDGR--GQCVIFRTSAATAFVGQERDPHEYLDYIHLDGVGLTNQNKLMEDDQSSYKALFTNFGHHKNVVNPNIT---MPYAYLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVATTQQDPHLKPRTFKKSVVRGAERAAGVTKVIARAAPIRRSRTVNAASVAD----GFEDQ--EEVPAWE 316          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.320e-57
Identity = 127/367 (34.60%), Postives = 171/367 (46.59%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD------------------------------------------------------------------GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEK-------VASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE 882
            L+Y+ V   ++PNTS  LSN +YTYPDLWVC YN YGCD + +E  C+ S   TE GP  A +   +  +     +P + ++ W+  SA   IE            G  + RG CV F+TSA    +G++RDPD+Y+DY LLD                                                                  GIG++ +   A  + +SY A+++ +  YK   D   I  PYA + MEL+Q+ DS   ITE DP   AEILG +GGFWDLILI WP+ FVAASQ  PNLKPRNF KS  R  E+       VA+ GP  ++ +       +    +  D   EE   WE
Sbjct:   33 LVYKTVERTKSPNTSVELSNVVYTYPDLWVCPYNQYGCDDITLELGCVESSWETEAGPPNAIFYNSEGTDQNAT-DPLEIEATWVDTSA---IE------------GIVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVFNSVGIGLTNQIKYAADDVSSYKAVSINSGVYKDQADAD-ITKPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSVTRTVERASGITKTVANSGP--MRRVESIEMRNETSGASLEDGFQEEPAPWE 380          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.510e-57
Identity = 121/323 (37.46%), Postives = 161/323 (49.85%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYI---------------------------------------DYALLD----------------------GIGVSQEHNLAGSEKASYNALTLGTVEYK--RNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASV 780
            L+Y  V   +NP+TSF LSN +Y YPD +VCLYN +GCD M +EE C  S+ +TEGG +TA + PG                            DL+  I +  YL   R  GWCV FETSA++   GE RDP+DYI                                       D  +L                       GIG+++E  L   + ASY AL   +  YK  R D+ITGI +PYA++ ME+ Q +DS+  ITEI+PL +AE+ G VGGFWDL+L+ WPI F++AS+  P+LK RNF+KS  R  E V  +
Sbjct:   33 LVYNAVKKSKNPSTSFVLSNNVYRYPDTYVCLYNFFGCDDMALEEFCASSVFDTEGGSSTAVFNPGG---------------------------DLEQEIATTAYLTDER--GWCVSFETSAVDIVDGE-RDPEDYILLNMYWYPGGTANASTTCISEEGEWESHSESVFMFLRDSDTGILSAGIQVAYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALETSSAIYKDKRTDNITGIASPYAWLSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQDPHLKVRNFKKSVTRGSEVVVDL 325          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.340e-54
Identity = 120/366 (32.79%), Postives = 177/366 (48.36%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDA--NETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD-----------------------------------------------------------------GIGVSQEHNLAGSEKASYNALTLGTVEYKR--NDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMRDPPRTT---FHDELDEELPTWE 882
            L Y+     + P+TSF L+NE+Y +PDLW+CLY NYGCD++E+EE+C+ S   TEGG   A + P      E  I  E  Q +++  +      ++    S+           RG CV+F TSA    +G++RDP +++DY LLD                                                                 GIG++Q+      +K+SY AL      +K   N +IT    PYA++ +E++Q+ DS   ITE +P   AE+ G +GGFWDL+LI WP+CFVAA+Q  P+LKPR+F+KS VR  E+ ASV  A+ +   +  ++     +    F DE  EE P W+
Sbjct:   69 LFYKAAEKAKAPDTSFLLTNEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEGGVPNAVFYPRVQLDQEQEITTEQLQIEAIPENTD----VDSEGNSLEDG--------RGKCVIFRTSAATAFVGQERDPHEFLDYILLDMYWNPGGTSGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTMGIGLTQQKKFMDDDKSSYKALFTNFGVHKNVVNPNIT---TPYAHLSLEMKQQFDSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAAAQQDPHLKPRSFKKSVVRGAERAASVSKAIARAAPINPSITKSAASAVDGFEDE--EEAPAWD 417          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 3.790e-50
Identity = 116/365 (31.78%), Postives = 174/365 (47.67%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD------------------------------------------------------------------GIGVSQEHNLAGSEKASYNAL--TLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSV--ASTMRDPPRTT-FHDELDEELPTWE 882
            L Y+     + P+TSF L+NE+Y +PDLW+CL+ NYGCD+ E+EE C+ S   TEGG   A + P    +     + T T+ + I        E+  Y     NY+   R  G CV+F+TSA    +G++RDP +Y+DY  LD                                                                  GIG++ ++     + +SY AL    G  +   N ++T    PYA++ +E++Q++DS   ITE +P   AE+ G +GGFWDL+LI WP+CFVA +Q  P+LKPR F+KS +R  E+ A V   + +   +  +S+M   P    F D+  E +P WE
Sbjct:   45 LCYKAAEKAKAPDTSFVLTNEVYKFPDLWICLFVNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLD---QLQETTTEELQIEAIP----ENTDYDSEG-NYVEDGR--GQCVIFKTSAATTFVGQERDPHEYLDYVHLDQMYWYPGGKFGNSTTCVVDGVEWADHREWVYGFLSDPEDPAAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVATTQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPIRHSSSMTATPAVDGFEDQ--EVVPAWE 394          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 5.800e-50
Identity = 118/359 (32.87%), Postives = 162/359 (45.13%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD-----------------------------------------------------------------GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE 882
            +LY+ +  R NP+ SF +SN +Y YPD+WVCLY  YGCD  E+EEEC+ S   T  G T+A + PG   E TI      T             ED                 GWCV FETS +   LG++R+   Y+DY LLD                                                                 G+GV+ E  L     A+  AL++ T  +K   +   I  PYA + ++ QQE +S+  ITE DP ++AE+ G VGGFWDL+++ WPI FVAAS+  P+LKPRNF+KS  +  E +       +  L  A T +D    + + E +EE P WE
Sbjct:   33 ILYQALGKRNNPSVSFEVSNTVYEYPDIWVCLYGEYGCDSWELEEECMESAQLTGWGNTSAVFYPGGEYEQTIPGVGMLTP------------ED-----------------GWCVEFETSTISQFLGQERNASYYLDYLLLDMYWYPGGTESDSNTCVVEGWEPHSEWMYVKLKDSGYPESGLVSTGIQVPYSCITNVSSSHSFTYVGMGVTIEERLGEEPVATNKALSVSTATHKDKVNAA-IDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLEGLR------IGELVTAGTRKD---GSSNPEDEEEKPHWE 352          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.780e-49
Identity = 109/314 (34.71%), Postives = 148/314 (47.13%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSIS--NTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD--------------------------------------------------------------GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDIT-GIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKS 747
            LLY+ V  R NP+ S  LSN ++ YPD+WVCLY +YGCD+ E+EEEC+ S +   T  G ++A Y PG   E  I+ E   T +                              GWCV F+TS +   LG +RD   Y+DY LLD                                                              GIGV+ E  L      +  AL++ T   K  D++   I  PYA + +++QQE +S+  ITE+DPL++AE+ G VGGFWDL++I WPI FVAAS+  P+LKPRNF+KS
Sbjct:   73 LLYKAVRKRNNPDASIELSNTVFEYPDVWVCLYVDYGCDEWELEEECMTSATANRTGWGHSSAVYYPGGVYEQEIHVEEKLTPN-----------------------------NGWCVEFQTSKITRFLGRERDAKYYLDYLLLDMYWYPGGLEVDSTTCVVEGWKTHKQWMYVFLNDPVLGQVSTGIQVPYSCITNVSSSHSHTYVGIGVTTEDKLGQEPIVNNKALSVSTATVK--DEVNPAIVKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFKKS 355          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 3.870e-46
Identity = 113/359 (31.48%), Postives = 159/359 (44.29%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSIS-NTEG-GPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD--------------------------------------------------------------GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSVASTMRDPPRTTFHDELD-EELPTWE 882
            LL++ V  R  P +S  LSN ++ YPD+WVCLY +YGCD++E+EEEC+ S + N  G G ++A Y PG   E  I+ E  +T                                GWCV F+TS +   LGE+RD   ++D+ LLD                                                              GIG++ E  L      S  AL++ T   K   +   I  PYA + +++QQ  +S   ITE+DPL++AE+ G VGGFWDL++I WPI FVAAS+  P+LKPRNF++S  +            L  L +  +     R  F+     EE P WE
Sbjct:   33 LLHKAVRKRDAPESSIELSNTVFEYPDIWVCLYADYGCDELELEEECMTSATANMTGWGNSSAVYYPGGEYEQEIHVEGRETPD-----------------------------HGWCVEFQTSKITRFLGEERDASRFLDHLLLDMYWYPGGLETDSTTCVIEGWKTHNQWMYVFLNDPALGQVSTRVPVPYSCITNVSSSHSFTYVGIGLTTEIKLGQEPIVSNKALSVSTATVKHEVN-PAIVKPYAQLSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQDPHLKPRNFKESVTKG-----------LSGLRIGDSKHPAARDGFNGSPSVEERPNWE 350          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 6.660e-46
Identity = 107/317 (33.75%), Postives = 144/317 (45.43%), Query Frame = 1
Query:    1 LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISN--TEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLD--------------------------------------------------------------GIGVSQEHNLAGSEKASYNALTLGTVEYKRNDDIT-GIQAPYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVR 756
            LLY  V  R+NP+ S  LSN ++ YPD+WVCLY  YGCD+ E+E EC+ S +   T  G ++A Y PG   E  I+ E   T +                              GWCV F+TS +   L  +RD   Y+DY LLD                                                              GIGV+ E  L      +  AL++ T   K  D++   I  PYA + ++ QQE +S+  ITE+DPL++AE+ G VGGFWDL++I WPI FVAAS+  P+LKPRNF KS  +
Sbjct:  105 LLYTAVRKRENPDASIELSNTVFEYPDIWVCLYVAYGCDEWELENECMTSATGNRTGWGNSSAVYYPGGVYEQEIHVEGKLTPN-----------------------------NGWCVEFQTSKITRFLDRERDAKYYLDYLLLDMYWYPGGLEADSNTCVVEGWKTHNQWMYVFLNDPESERVSTGIQVPYSCITNVSSSHSFTYVGIGVTIEDKLGQEPIVNNKALSVSTATVK--DEVNPAIVKPYAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFTKSVTK 390          
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Match: A0A6H5JV19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV19_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.460e-42
Identity = 122/388 (31.44%), Postives = 163/388 (42.01%), Query Frame = 1
Query:   52 LSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMSISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSIHSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLDGI--------GVSQEHNLA-------------------------------------------GSEKAS-------------------------------------YNALTLGTVEYKR--NDDITGIQA------------------PYAYMKMELQQESDSMVSITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSAVRAKEKVASVGPALLQNLSV---ASTMRDPPRTTFHDELDEELPTWE 882
            L NE+Y YPDLW+C Y NYGCD  E+EEEC+ S   TEGG   A + P          +  Q   V         I DL       N       RG CVVFETSA+   LG++RDP +Y+DY  LDGI        G   +H L                                            G E A                                      +N L +G     +  +DDI+  +A                  PYA++ +E++Q++DS   ITE +P   AE+ G +GGFWDL+LI WP+CFVAA+Q  P+LKPR+F KSAVR  ++VA V   + +   V   +ST        F D+  EE+P W+
Sbjct:   13 LPNEVYKYPDLWICPYVNYGCDAWELEEECVASAWMTEGGEPDAVFYP--------RVKLDQLHQVTTEERQINAIPDLTNFDSEGNE--QENGRGHCVVFETSAITDFLGQERDPHEYLDYVHLDGILPVGLVANGSLSQHELEPVIGSTVPLSRPCRPDKRMFFADEQMYWYPGGKFGNSTTCVNEGVEWADHREWVYGFLSDPEDPTAISTGFPLSYSCITNTSNTHIFNTLGVGLTNQIKFMSDDISSYKALFTNFGVHKNAVNPNITMPYAHVSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAATQQDPHLKPRSFTKSAVRGAQRVAGVTKMVARAAPVKHTSSTSHASAVDGFEDQ--EEVPAWD 388          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1053.557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNQ1_ECTSI3.260e-6740.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXH8_ECTSI2.320e-5734.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU23_ECTSI4.510e-5737.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L518_9PHAE3.340e-5432.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNS2_ECTSI3.790e-5031.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMD2_ECTSI5.800e-5032.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K474_9PHAE2.780e-4934.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN97_9PHAE3.870e-4631.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD1_ECTSI6.660e-4633.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JV19_9PHAE1.460e-4231.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1053contigF-serratus_M_contig1053:174448..179545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size882
Cds size882
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1053.557.1prot_F-serratus_M_contig1053.557.1Fucus serratus malepolypeptideF-serratus_M_contig1053 174448..179545 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928885.6918204-CDS-F-serratus_M_contig1053:174447..1745041622928885.6918204-CDS-F-serratus_M_contig1053:174447..174504Fucus serratus maleCDSF-serratus_M_contig1053 174448..174504 +
1690962615.2189639-CDS-F-serratus_M_contig1053:174447..1745041690962615.2189639-CDS-F-serratus_M_contig1053:174447..174504Fucus serratus maleCDSF-serratus_M_contig1053 174448..174504 +
1622928885.712-CDS-F-serratus_M_contig1053:174779..1750551622928885.712-CDS-F-serratus_M_contig1053:174779..175055Fucus serratus maleCDSF-serratus_M_contig1053 174780..175055 +
1690962615.23591-CDS-F-serratus_M_contig1053:174779..1750551690962615.23591-CDS-F-serratus_M_contig1053:174779..175055Fucus serratus maleCDSF-serratus_M_contig1053 174780..175055 +
1622928885.728119-CDS-F-serratus_M_contig1053:176368..1764641622928885.728119-CDS-F-serratus_M_contig1053:176368..176464Fucus serratus maleCDSF-serratus_M_contig1053 176369..176464 +
1690962615.253215-CDS-F-serratus_M_contig1053:176368..1764641690962615.253215-CDS-F-serratus_M_contig1053:176368..176464Fucus serratus maleCDSF-serratus_M_contig1053 176369..176464 +
1622928885.7757905-CDS-F-serratus_M_contig1053:178235..1783221622928885.7757905-CDS-F-serratus_M_contig1053:178235..178322Fucus serratus maleCDSF-serratus_M_contig1053 178236..178322 +
1690962615.2680538-CDS-F-serratus_M_contig1053:178235..1783221690962615.2680538-CDS-F-serratus_M_contig1053:178235..178322Fucus serratus maleCDSF-serratus_M_contig1053 178236..178322 +
1622928885.79291-CDS-F-serratus_M_contig1053:179179..1795451622928885.79291-CDS-F-serratus_M_contig1053:179179..179545Fucus serratus maleCDSF-serratus_M_contig1053 179180..179545 +
1690962615.2757397-CDS-F-serratus_M_contig1053:179179..1795451690962615.2757397-CDS-F-serratus_M_contig1053:179179..179545Fucus serratus maleCDSF-serratus_M_contig1053 179180..179545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1053.557.1

>prot_F-serratus_M_contig1053.557.1 ID=prot_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=polypeptide|length=294bp
LLYRGVHNRQNPNTSFTLSNEIYTYPDLWVCLYNNYGCDKMEMEEECIMS
ISNTEGGPTTATYRPGDANETTINFEPTQTDSVWIHVSACIFIEDLKYSI
HSHNYLGSRRTRGWCVVFETSALEYKLGEDRDPDDYIDYALLDGIGVSQE
HNLAGSEKASYNALTLGTVEYKRNDDITGIQAPYAYMKMELQQESDSMVS
ITEIDPLNMAEILGQVGGFWDLILIFWPICFVAASQGAPNLKPRNFRKSA
VRAKEKVASVGPALLQNLSVASTMRDPPRTTFHDELDEELPTWE
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mRNA from alignment at F-serratus_M_contig1053:174448..179545+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1053.557.1 ID=mRNA_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=mRNA|length=5098bp|location=Sequence derived from alignment at F-serratus_M_contig1053:174448..179545+ (Fucus serratus male)
CTGCTGTACCGGGGCGTGCACAATCGGCAAAACCCCAATACCTCTTTTAC TCTTTCGGTGAGGTGCAGGACAATAGTTTGGATTACACTTGCTGAAAAAT TCCAATAGACGGCGACCACACCCATCGTGGTCTAGGCTATTAATAGTTCA AACGTTAAGTGAGGACAACGATAAAGCACGTGTAGGAAGCTTTCTTAGAT TTGGTAATGTTTGTTACTTTGAAGATCACATTTCAATCAACTTGTGCTCT CGACAACTGAACTGATGATGGTCTCCGTGGCCTCAACCATCGTTCCCCAA TGCGATGCCACTATTTTTGTTTGACGAAACAGAATGAAATCTACACCTAT CCAGACCTATGGGTGTGCTTGTATAACAATTACGGCTGCGACAAGATGGA GATGGAGGAGGAATGCATCATGTCCATTTCGAACACCGAGGGTGGGCCGA CGACGGCGACATACCGACCAGGCGACGCAAACGAAACGACCATCAATTTT GAGCCTACTCAAACTGATTCGGTATGGATTCACGTTTCCGCGTGTATCTT CATAGAGGACTTGAAATATAGTATACATTCTCATAATTATTTGGGTAGTA GAAGAACCGTTCTGTGAGATACGTTACAATGTCCTTGAGCAGTACCCATG AAAACATTGATCACAAATGATCGGTTTGTCTGTTGGTTGTGCTTTTCGAT GTTTTCCTCGCATTCATTTTCTTCTTCTGGCGTCTCTTAACGTGTTTAAT GGCTCTGTCGCTCAATGCTGCTTTTGATCGTACTCCCCATGAAATATATA TTTTGTTTATTGTGATGATGAAGTGTTCATTTCTCGATGCCTCTACTATT GCTCTGTGGCAACTATACTGTAGTAGTACTTATACTGTGAAGTCTGATAT TAATAGTTTATATTTTTGACTACCACCATCGCATGCAAGCATAATTTCCG CACGCTTACGTTTCAAGCGTTTAGCTGGCTCAGCTTTCAGCAGTCTGGTG ATGACTCTTCGGCTGTCCCTACAGGCCCGAAAGTGTCCTATACGTTATTC GCGCTTTACATTTGAAATGTCATATTTAGTCGTGATCCGGGTAAGAACCC CAAAAACATTTCGGGGATCTAAGCATATTATACTCCTGATTACTTTATCA TTGTTGACCAAATCACAAAGAGCTTTATGTATAAAATGCTTGTGGAGTAC GTAAACAACGTTAGATTTCGAAATTTGTGGATCAGACAAAAATAGCATAC ACAACACAAACACGATACCACCTGGCCGAGCAACACCAGGAAATGTAAAG ACATATTGTGCGGTACTTTTCGAACCATCAGCGTGGGAACGCATGCGGTT TTCCTCATCTCCTAGCAAGTGGGATGCCCGTTAAAATTCAACGCACAGCG GTCTTCCTGGCGAAGCGTTTTTGGAATTAAAGATGCTGATGCTACACTGA CGAAACGATAATATTATAGCGAAGTTGTTCAGCATTTCGACTATTATAGA GTTGCAGGTAGCGAATAGACTACTCGTGGTTTGCAGGAAAGATGTGGCGT TGTGCGGAAGTGAATTTACTAGTTCATCCAGCCGTCATTATTTTTGCTAT GTATTCCCCTGCCCCCCACACACGAGGCATGGCGCGTGATGAGTATACTA AGTCATTAATTTTAATATTATCGAGTCACCCATAAGACTTTTCGGGTGGC ACGATGCAACGATTTCCCACAATCGATCGTGTATAAATTACTCACGGAAA AATCACATCACGAACCAGGGCTTATTCACGAGTTTTATACATGGGATGTT GTTCTAAATTGGTCTGGTCTACCTTGGTGAGGTTGTCAGACGGCGTTTCG TATTGTCCGCCTAATCTCCTGCTTATCTGCCTCAACCAACAATGCGTCGC CCTTTTTCCGTCTTCAACCAGCGTGGCTGGTGCGTCGTTTTCGAGACGTC AGCTCTGGAATACAAACTTGGGGAAGACCGGGATCCCGACGACTACATTG ATTATGCTTTGCTGGATGTGAGTTGCCGGAAACGGAATAGGAAAGGTTGC TTGATAGCACACAATCACAGTTCAAACTGGCTCTGGCACAGTACCTAAGA TTCCCTTGTATCGAGTACGTTTAACGAATCAGAATATGTGTATGTTTTCT TATTTCTTGGTATTTTCAACATGCCCACTTCATACCAATAGTGGGTGTGG GAAAGAGAGGCTATTAATTGGCCCATGGTGATCTGCCAAGGCAGCACTCG TTCGAAACTACCTTGAGATTTACTGGCCCTGTGCCGGTGGACTCTTGGCA GTGAACGCTATCGGTACGCAATTGCGTGATCCGATAAGCTCGGGACTGAC CCGATGGCATATGGCGAATTCATAAATGGACGCCACCGTGGAACTTGGAA GGAATCTCGTAAGTAAGAATCAGATTCAGCCTGAATATTATGTTGATGAG CAGGCTGACGCGGGACTGGACGGCTGAACCCATCTCGCAAGACCAAATTC TCAGGCACGCACGGGGACAGGCAAATATTATTTTTCCCTGTTCAGCTGAC CACGAGCAGGATTGGCAGCCTTACCGAGTTGATCCATACTCTGCTATATG TTACGACTGTACATACATACCTGCTTTTAGGACTCGCACTCAGAGCTGTG CAGCAGCCAACAGCAATGTACCAACCTTATCGGCATAAAAACTAACAGAT GTACTGGTACCCCGGCGGAGCTGAAAACAATTCTACAACCTGCATCCAAG AGGAGGGAGCTTGGAAATCGCACTAGTAAGTGATGTATACGACGTTCGAA GTCCTGCTCGATCGAGCGCGAATAGTTTACCTAAAAAAATGCGCTTGCAA TCAAAATGTTTTGCTCTGTACTGTATAATATGTCTTATTCGTGATACGAT GATTGGATATTATGTGATGTACGAGTGGAGGCATGGTTTTGACTAACTGT TGGTATTGCGATACAATTTGGTGTGTTTGATACTAGTGACGGGTAATCAA TCGCTCTGATCTGATGAGTTCACCGCGCTAAACGTAGTTGTCAAGTCTGA AGGGTCAGCTGTCATTGAGGGCGAGATATTCCAAAACGATTGCGACGTCT TCTCAAATTTAGGGTTGGCTCTGATGCGCTGGCTTTTTGCGCCCTTTGGT TTTTAATTTTGACAGCAACACTTTCTGATCCAAGTTCAACTGTTCACACA AGACCTCTCAAGTTAAGACGCTGAACGACCCGTGCGTCCCGTCTGACGCC CCTCCCTCGATTGTGTTTCCTTCGATGATCATGCAGCGATAATGTGTTCG CCTTTTTGAACGACCCGTTAACGGGCGAAGTTTCTGCGGGGATTCAAATC CCGTACTCGTGCATGACGAATGAATCCAGCGGCCACTATTTCACATACGT GGTAAGCACCACACTGAAAGTGATATAGCAACGCTTGCCAGGTACTAGCG ATCGCCGCCGCCCTGCGAGTAGCGCAAGAAACAAACGTCTAGACCTTTCG ATTTTGTGTGTCGACTGGTATTGGTTGATGATTGGTTGGTAGTGCTCCTT GTCGCCCCAGTAAACCTGACGCGCCCATGTGCATTAGGGTATTTCAGACA TCTTGAGTAGATCTGACACCACAAGTAAGTTTTATATGTCGTATGCCGCC GGAAACTTGCTAGCGACCGAAGGGGCTTTCGAAACGTTACAAATGAATAC GCGGGATATTTTCCACCATTTAGTCTCTTGTTGTTAGCATCTGCCGTAGC CACCAATAAAGAACGTTGTAAACACGCCAAACCATCAGGGGATTGGGGTT TCCCAGGAGCACAACCTCGCTGGTTCAGAGAAAGCATCGTACAACGCTCT GACTCTAGGAACGGTGGAGTATAAGGTCGAGGTAAGCGCAGTTTCCTCCG CATTGATCTCCATTGCACACTAGACGTAGATGCTTTAACTTCGGAACATT TTATTTGTTACAAAGGCAAATCATTATGGTAATATTAGCAGTTGGTTGTG TTCAAGCTTTACTGGCAGCCACACATCCCGCAGATATTGACATTTTGTAA CGAGTTCGAGTAGGAAGTATCACATAATGGTGGAGCTTCACACGATCCTG AAAACAGAGTTTGGCAAGTGAAACGGAGCCCAGTTCTTGGTCAACTGTGT TGATGCGCACCAACGAGGGTACACACTGTGTAGCCTGTCGCTCTATAGAT GTTTCAGCGATCGCACCACGGGGTGTAGGTTCGAGAGAATTGCTTCAAAA CCGTGCAATACATTACGAAAAACAGGCCAAATTGCGAAGGAAGTCAAGTT GGTAACAAACCTTACCAAATGTGTAAAGTTTGAGCTCGAACCGGTGACGT TTTTTCCACAACTCGATCGAGTTGTAACTCTTTTAGTTGTTTTTTGCGAC TCGCTTGTATTTAAAGAAGGAATACGACACTATTTTCTGGGCCCTTTTCG AGGATCCCTCTAAAAAACTAAACTCGGGCTTTTTACAGTCCGTACGATAT ACATGGGAATTAAAAAGGATTTAAATTGTTACGGCATGCGTCGTGCAAGG CATACGTCGGGGAACTTTATGTAAGGTTCAAATAACAATTATGTTTTGGC CTGGAGCCTGAGTCTAGAATCCAACCCCCATTCAAAGGAGACCGTGTATG GTGTTGATGATGCCCATGAAAAGTGCGCACGAGCTTGATCCCGCCCGCCT TTCCCTGTGGACCTGTCATTTTTGTCTGACAGAGAAATGACGACATTACG GGGATACAAGCTCCATACGCGTACATGAAAATGGAACTGCAACAGGAATC AGATTCGATGGTGTCGATCACGGAGATAGATCCACTCAATATGGCCGAAA TATTAGGCCAGGTTGGAGGATTCTGGGATCTGATCCTGATATTTTGGCCA ATTTGTTTCGTGGCCGCTAGTCAAGGAGCCCCGAACCTGAAGCCCCGCAA CTTTCGGAAGTCTGCCGTCCGGGCAAAGGAGAAAGTCGCATCTGTTGGGC CAGCGTTACTCCAGAATTTGTCAGTAGCGTCCACGATGAGAGACCCACCA CGAACCACATTTCACGACGAATTAGATGAAGAGTTACCTACCTGGGAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1053:174448..179545+

>mRNA_F-serratus_M_contig1053.557.1 ID=mRNA_F-serratus_M_contig1053.557.1|Name=mRNA_F-serratus_M_contig1053.557.1|organism=Fucus serratus male|type=CDS|length=1764bp|location=Sequence derived from alignment at F-serratus_M_contig1053:174448..179545+ (Fucus serratus male)
CTGCTGTACCGGGGCGTGCACAATCGGCAAAACCCCAATACCTCTTTTAC
TCTTTCGCTGCTGTACCGGGGCGTGCACAATCGGCAAAACCCCAATACCT
CTTTTACTCTTTCGAATGAAATCTACACCTATCCAGACCTATGGGTGTGC
TTGTATAACAATTACGGCTGCGACAAGATGGAGATGGAGGAGGAATGCAT
CATGTCCATTTCGAACACCGAGGGTGGGCCGACGACGGCGACATACCGAC
CAGGCGACGCAAACGAAACGACCATCAATTTTGAGCCTACTCAAACTGAT
TCGGTATGGATTCACGTTTCCGCGTGTATCTTCATAGAGGACTTGAAATA
TAGTATACATTCTCATAATTATTTGGGTAGTAGAAGAACCAATGAAATCT
ACACCTATCCAGACCTATGGGTGTGCTTGTATAACAATTACGGCTGCGAC
AAGATGGAGATGGAGGAGGAATGCATCATGTCCATTTCGAACACCGAGGG
TGGGCCGACGACGGCGACATACCGACCAGGCGACGCAAACGAAACGACCA
TCAATTTTGAGCCTACTCAAACTGATTCGGTATGGATTCACGTTTCCGCG
TGTATCTTCATAGAGGACTTGAAATATAGTATACATTCTCATAATTATTT
GGGTAGTAGAAGAACCCGTGGCTGGTGCGTCGTTTTCGAGACGTCAGCTC
TGGAATACAAACTTGGGGAAGACCGGGATCCCGACGACTACATTGATTAT
GCTTTGCTGGATCGTGGCTGGTGCGTCGTTTTCGAGACGTCAGCTCTGGA
ATACAAACTTGGGGAAGACCGGGATCCCGACGACTACATTGATTATGCTT
TGCTGGATGGGATTGGGGTTTCCCAGGAGCACAACCTCGCTGGTTCAGAG
AAAGCATCGTACAACGCTCTGACTCTAGGAACGGTGGAGTATAAGGGGAT
TGGGGTTTCCCAGGAGCACAACCTCGCTGGTTCAGAGAAAGCATCGTACA
ACGCTCTGACTCTAGGAACGGTGGAGTATAAGAGAAATGACGACATTACG
GGGATACAAGCTCCATACGCGTACATGAAAATGGAACTGCAACAGGAATC
AGATTCGATGGTGTCGATCACGGAGATAGATCCACTCAATATGGCCGAAA
TATTAGGCCAGGTTGGAGGATTCTGGGATCTGATCCTGATATTTTGGCCA
ATTTGTTTCGTGGCCGCTAGTCAAGGAGCCCCGAACCTGAAGCCCCGCAA
CTTTCGGAAGTCTGCCGTCCGGGCAAAGGAGAAAGTCGCATCTGTTGGGC
CAGCGTTACTCCAGAATTTGTCAGTAGCGTCCACGATGAGAGACCCACCA
CGAACCACATTTCACGACGAATTAGATGAAGAGTTACCTACCTGGGAGAG
AAATGACGACATTACGGGGATACAAGCTCCATACGCGTACATGAAAATGG
AACTGCAACAGGAATCAGATTCGATGGTGTCGATCACGGAGATAGATCCA
CTCAATATGGCCGAAATATTAGGCCAGGTTGGAGGATTCTGGGATCTGAT
CCTGATATTTTGGCCAATTTGTTTCGTGGCCGCTAGTCAAGGAGCCCCGA
ACCTGAAGCCCCGCAACTTTCGGAAGTCTGCCGTCCGGGCAAAGGAGAAA
GTCGCATCTGTTGGGCCAGCGTTACTCCAGAATTTGTCAGTAGCGTCCAC
GATGAGAGACCCACCACGAACCACATTTCACGACGAATTAGATGAAGAGT
TACCTACCTGGGAG
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