mRNA_F-serratus_M_contig1052.556.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1052.556.1
Unique NamemRNA_F-serratus_M_contig1052.556.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 4.580e-101
Identity = 219/514 (42.61%), Postives = 290/514 (56.42%), Query Frame = 1
Query:   19 DNNWVIHTRN-VSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEIAYRDGLVTDLFLRPPPVW----TTDNDT-VWNVIHPND--SDIEGGTVSNVFGNYSVGTANARYEINNDP---------DSILDGEVQIASWNTNADGLTNKLSYDDGRSGTAHLESFNCTDIEKEVYIHVENEDEHWGTVSDCISGPPKVDNTSISPALKISKTKGDTYF---IVEESVTYPSFLYSVWKADADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFSENNSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVTAPALVNDE---EHSSKMRIFVRREDQGHISVAVSDVKGHPNSWSQSFGRNETVAV---DDPVPTSSPNHA----NEFGGAFVP 1470
            D  WV+   +    T  IG +FV LAYFLHPA+E AF R+RAYR WR ++ RQ VEVT+Y L+ EV GGRGSWD+AR +AV+LA FSLASWGLEL +++A  +G   DL  RPPPV+    T D +T  W V+  +D   D  G        N     AN+RY I  D          D+ ++GE+ +ASW+         L YD   +    LE    T  + EVY+  +     WG   DC  GP     T+  PA+ +  T GD+     IVEES +YP+FLYSVW A+   S     + ++F++ S+ RLVEAV+T IVH      E  GG  F LLR FSE    Y  GL+ RASPFGE P G+    Q   +ETI+ GV +++ AL+C LW+M ST V + W + LR+ IGMD+YDRDEL+RAV+     + +   EH + +RIFVRRED GHI+V ++D         + F R  T  V   DD +P      A    ++FGGA VP
Sbjct:   10 DKTWVLPLADGFDGTLTIGWTFVLLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLASLEG-EADLLNRPPPVFLRPETNDTNTDPWQVLTLSDIDPDYNGNWRGLEHLNVEDTHANSRYYIVKDTRDYLGKTAKDTFINGEILVASWDDKP-----SLFYDINGANVDSLECSGETLKDAEVYLGTDL----WGNALDCERGPRPTGLTTSPPAVVL--TNGDSGLVSVIVEESSSYPTFLYSVWTAEGSDS---VELAYLFHVHSTVRLVEAVITGIVHG-----ETEGGACFGLLRVFSETRVEYEDGLD-RASPFGEIPTGDTVLVQ--DLETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPA-IRIFVRREDSGHITVFINDSHDKEQRAWERFLRRRTSKVVEGDDRLPAGGDADAALSDDKFGGATVP 499          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 9.040e-83
Identity = 189/495 (38.18%), Postives = 272/495 (54.95%), Query Frame = 1
Query:   37 HTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEIAYRDGLVTDLFLRPPPVWTTDNDTVWNVIHPNDSDIEGGTVSNVFGNYSVGTANARYEI--------NNDPDSILDGEVQIASWNTNADGLTNKLSYDDGRSGTAHLESFNCTDIEKEVYIHVENEDEHWGTVSDCISGPPKVDNTSISPALKISKTKGDTYFIVEESVTYPSFLYSVWKADADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFS-----ENNSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVTAPALVNDEEHSSK--MRIFVRREDQGHISVAVSDVKGHPNSWSQSFGRNETVAVDDPVPTSSP-NHA-NEFGGAFVP 1470
            H      T+ IG SFVFLAYFLHP +E  + +VRA R WRAVE  + V+VT YP+V EV  GRG WDAAR V +LLAAFSL SW LEL LEI + +G    L L  P          W V+   + + E G       N     A + Y +        +   ++ +DGE+ +ASW+ + D     L Y  G + TA ++S  C     +VY++   ++  WG+   C  GP   + TS  P + + K++G+   IVEE  T+PSFLYSVW A +  S   A   + F+ISS+ RL EAVVT IV+      E  GG  F LLR F+     E   + G    +RA PFGE P  ++ ++ L  +ETI+ GV ++  AL+  + ++V +LVGI WS+ L S + MD+YDRDEL+RA++  A   D + S++  MRI+V++E  G ++V +S      N  ++   R E      P+P +   +HA ++ GGA +P
Sbjct:   17 HLPTQEPTFAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEIDHVEGGARLLNLPVPIYLVNQTSLAWQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASWDPD-DKHRAGLYY--GSNHTATVDSITCKGTGGDVYLY---DEAAWGSFLWCGEGPLAENKTSSQPVIILEKSEGEVSVIVEEVGTHPSFLYSVWTAGSADSKELA---YSFHISSTVRLAEAVVTGIVNG-----ETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDS-LQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKERGGELNVVISASDDDQNGCARFLLRREPTPTVHPIPVADAVSHALDDHGGAPLP 496          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 3.440e-81
Identity = 196/529 (37.05%), Postives = 280/529 (52.93%), Query Frame = 1
Query:    7 SEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEIAYRDGLVTDLFLRPPPVWTTD--NDTVWNV-----IHPNDSDIEGGTVSNVFGNYSVGTANARYEINN-------DP-DSILDGEVQIASWNTNADGLTNKLSYDDGRS----------GTAHLESFNCTDI-----EKEVYIHVENEDEHWGTVSDCISGPPKVDN-TSISPALKISKT-KGDTYFIVEESVTYPSFLYSVWKADADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFS---ENNSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVTAPA---LVNDEEHSSKMRIFVRREDQGHISVAVSDV-KGHPNSWSQSFGRNETVAVDDPVPTSSP--NHANEFGGAFVP 1470
            +EW  N        +  T  IG SF+ LAYFLHP V  A+ RVRAYR WRA+E  + VEVTAY   EE+  GRG WDA RIV VLL  F++ASWGLEL L+    +     L  +P PV+  D  N+  W V     I+  D D  G  +     N S   A + Y + N       DP +  + GE+ +A+W+     +   LS+  G S           TA +E+ NC+       +  VY  + N+ E WG V +C +GP   +      PA+ +++    +T+ I+EE+ T+ SFLYSVWK + D+      + + F+I+S+ RL EAVVT IV       E +GGG F +LR FS   E        +  +A PFGE+P   +   +L+ +ETI+ G+ +++ A+ C + ++  T+VGI W++ L    GMDIYDRDELIRAV+       V+     S+MRIFVRRED G ISVA+SD  +  P    + +   +     DP P +     + ++FGGA  P
Sbjct:   24 AEWPING-------IDGTRAIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLDQYSHENEACPL-TQPSPVYRKDLDNNARWQVLNLDEINGEDRDYNGSWLD--LPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDP---AIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTNGDS----VTLTYAFHIASTVRLAEAVVTGIVLG-----ESSGGGCFGMLRAFSRGPEPPEDEYAKMMVKALPFGENPQSGKVE-KLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNGGISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDFGGASAP 529          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.290e-77
Identity = 163/452 (36.06%), Postives = 241/452 (53.32%), Query Frame = 1
Query:   31 VIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEIAYRDGLVTDLFLRPPPVW-------TTDNDTVWNVIHPNDSDIEGGTVSNVFGNYSVGTANARYEINNDPDSILDGEVQIASWNTNADGLTNKLSYDDGRSGTAHLESFNCTDIEK--EVYIHVENEDEHWGTVSDCISGPPKVD----NTSISPALKISKTKGDTYFIVEESVTYPSFLYSVWKADADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFSENNSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVTAPALVNDEEHSSKMRIFVRREDQGHISVAVSD 1347
            +I T + +  + I    + L+  LHP V   F R+RA   W+++E ++ VEVT Y +  E  G RG WD AR+V +LLAAF +++WGLEL L++A R     DL  RPPP+           N + W VI   ++ +EGG++ ++ G    G A   Y I    +SI+ G    ASW+  +  + + L YD   +G A +    C+   +   +YI  E E   WG VS+C SGP  V+    + +  P + ++ T+G+ Y IVEE  +YPSFLYSVW    +    EA + H FY+SS+ RLVEA+V+             GGG   +L KFS  N+TY +    R SPFGEHP       +L  +E I  GV +S    +C + +MV T    A  L   SR  +D+YDRD+LIRA++ P+    +     ++I+VR+E     S+ +SD
Sbjct:    4 IIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIG---ESIIRGNTVFASWSPQSSRIASGLFYDID-NGQAIVSEIACSTPSRTGSLYITAE-ESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW-VPGEVKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXX-----XGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPSSSSVE-RLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVALKIYVRQERNNGFSIIISD 443          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 5.030e-75
Identity = 193/525 (36.76%), Postives = 284/525 (54.10%), Query Frame = 1
Query:   28 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEIAYRDGLVTDLFLRPPPVWTTD--NDTVWNV-----IHPNDSDIEGGTVSNVFGNYSVGTANARYEINNDPDSI--------LDGEVQIASWNTNADGLTN--------KLSYDDGRSGTAHLESFNCTDI----EKEVYIHVENEDEHWGTVSDCISGPPKVDNTS--ISPALKISKT-KGDTYFIVEESVTYPSFLYSVWKADADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFSE--NNSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDR-----DELIRAVTAPALVND----EEHSSKMRIFVRREDQGHISVAVSDV-KGHPNSWSQSFGRNETVAVDDPVPTSSPNHANE--FGGAFVP 1470
            W I+   +  T  I  SF+ LAY LHP V +A+ RVRAYR WRA+EN + VEVTAY   EE+  GRG WDA RIV VLL  F++ASW LEL L++   +     L  +PPPV+  +   +  W V     I+  D   +G +  ++  N S   A + Y + N   S         + G++ +A+W+    G  N          SY++ ++ TA +E+ +C+      +  VY  + N+ E WG V +C  GP ++ N S    PA+ +++    +T+ I+EE+ T+ SFLYSVWK + ++ +    + + F+I+S+ RL EAVVT IV       E TGGG F +LR FS   N      G   +A PFGE+P   +   +L+ +ETI+ G+ +++ A+ C + ++  T+VG+ W++ L    GMDIYDR     DELIRAV+      +     EHS K+RIFVRRED G ISVA+SD  +  P    + +   +     DP P +     N   FGGA VP
Sbjct:   26 WPIN--GIDGTRAISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDLYSFENEAYPL-TQPPPVYRENIQGNASWQVLNLDEINGEDRKYDGSSWFDLP-NVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAIAGSLNFFFGENILSRSYEE-KTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGP-RLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTNGESVN----LSYAFHIASTVRLAEAVVTGIVLG-----ESTGGGCFGMLRAFSRGPNPPEDEYGEMIKALPFGENPQSGKVQ-KLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSLQGQRRELDPAAEHS-KIRIFVRREDNGSISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVP 533          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.250e-71
Identity = 170/471 (36.09%), Postives = 254/471 (53.93%), Query Frame = 1
Query:   19 DNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEIAYRDGLVTDLFLRPPPV--WTTDNDT---VWNVIHPN--DSDIEGG--TVSNVFGNYSVGTANARYEINNDP--------DSILDGEVQIASWNTNADGLTNKLSYDDGRSGTAHLESFNCTD--IEKEVYIHVENEDEH---WGTVSDCISGPPKVDNTSIS-PALKISKTKG-DTYFIVEESVTYPSFLYSVWKADADT----SDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFSENNST-----YGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVTAPALVNDEEHSSKMRIFVRREDQGHIS 1332
            +  W + T  V ST  IG SF+FLAY LHPA+E A+ RVRAY  WR +E +Q V+VT Y ++ E+  GRG WDAAR++ +LL AFSLASW LEL +++   D     L  +PPPV  W  +ND     W+V++    DS+ +G    + NVF  +    A +RY + ND         D  +DGE+ +ASW+   +   + L Y  G+S T  ++   C+      +  +   N  +H   WGTV +C  GP   + T  S P++ ++   G DT+ IVEE+  +PSFLYSVW A  D+     D+   + + F+I+S+ RL EAVVT IV+         GG  F LLR +S+ + T     YG    ++A+PFGE P     ++ L+ +E I  GV ++  A++  +W++V + +G   +  LRS+I MDIYDR                EH ++  +  R+  QG  +
Sbjct:   10 NETWTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLNPVDN-PAHLLTQPPPVFKWDAENDNGEVPWHVLNLTEIDSEYQGNWWKLPNVFETF----AKSRYYVQNDTYYAWSKRKDRYIDGEIIVASWSP--EEKPDSLIY--GQSATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAGGG---GGACFGLLRAYSKGSDTPEFEEYGT---EKATPFGEDPENGAVDS-LNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDRHY--------------EHQARSTLHARKTPQGRAT 450          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 6.190e-64
Identity = 183/529 (34.59%), Postives = 273/529 (51.61%), Query Frame = 1
Query:   28 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEI------AYRDGLVTDLFLRPPPV--WTTDNDTV--WNVIHPND--SDIEGGTVS--NVFGNYSVGTANARY---EINNDP-----DSILDGEVQIASWNTNADGLTNKLSYDDGRSGTAHLESFNC---------TDIEKEVYIHVENEDEHWGTVSDCISGPPKVDNTSIS-PALKISKTK-GDTYFIVEESVTYPSFLYSVWKAD-----ADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFSEN-------NSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVT--APALVNDEEHSSKMRIFVRREDQG-HISVAVSDVKGHPNSWSQSFGRNETVAVDDPVPTSSPNHANEFGGAFVP 1470
            W + T  +++T VIG +++FLAY +HP  + A+LRVRAYR WR +E  + V+VT YP   E+ GG    D AR+VA+LL  F+LA W LEL ++       AY   L       PPPV  W+  N T   W+V+  N+   + EG  ++  NVF       A +RY   E  N P     D  ++G++ +A+W+ N     + L Y  G + T  ++   C         TD    V ++  N  E WGTV +C  GP  V+    S P++ +++ + GDT+ IVEE+ + PSFLYSVW A      A   ++   + + F+ISS+ RL EAVVT IV+         GG  F LLR ++         ++ YG   +Q+A PFGE P+     + L  IE I  GV ++   ++    ++  + +GIA +L L  +  MDIY+RDEL+RA    A  L +D    S MRI V+RED+  H+++ +S+     +  ++   R      DDPVP +  N  N   G   P
Sbjct:   11 WELPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDWFPVSVPAYSQTL-------PPPVFQWSAGNSTPTPWHVLSLNEIAPEYEGDWLNQPNVFET----VAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRNT--KPDNLVY--GENATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVEVIGNSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDG---GGACFGLLRAYNRGPYDTRDFSALYG---KQKARPFGEDPVSHYIYS-LKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCARFLLRRGPEVTDDPVPATD-NTPNGRDGVPFP 516          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.160e-56
Identity = 174/519 (33.53%), Postives = 261/519 (50.29%), Query Frame = 1
Query:   28 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEI------AYRDGLVTDLFLRPPPVWTTDNDT--VWNVIHPN--DSDIEGGTVS--NVFGNYSVGTANARYEIN-------NDP-DSILDGEVQIASWNTNADGLTNKLSYDDGRSGTAHLESFNCT-----DIEKEVYIHVENED-----EHWGTVSDCISGPPKVDNTSIS-PALKISKTK-GDTYFIVEESVTYPSFLYSVWKAD-----ADTSDNEAVMRHVFYISSSARLVEAVVTEIVHASFSSREPTGGGSFALLRKFSEN-------NSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVT--APALVNDEEHSSKMRIFVRREDQGHISVAVSDVKGHPNSWSQSFG-RNETVAVDDPVPT--SSPN 1437
            W + T  +++T VIG +++FLAY +HPA + A+LRVRAYR WR +E  + V+VT YP   E+ G  G  D AR+VA+LL  F+LASW L+L +++      AY   L   +F      W   N T   W+V+     D + EG  ++  NVF       A +RY +        ++P D  ++G++ +A+W+ N     + L Y  G   T  ++   C+     DI  +  I V  ++     E WGTV +C  GP  +D    S P++ +++ + GDT+ IVEE+ + PSFLYSVW A      A   ++   + + F+ISS+ RL EAVVT IV+         GG  F LLR ++         + +YG   +Q+A PFGE P+    N+ L   E I  GV ++   ++    ++  +  GI  +L L  +  MD+Y+RDEL+RA+   A  L +D    S MRI V+RE                      F  R      DDPVP   S+PN
Sbjct:   11 WDLPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDVFPVPNPAYSQTLAPQVFK-----WPASNSTGASWHVLSLTEIDQEYEGDWLNQPNVFET----VAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRNT--KPDNLVY--GERATVMVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEG---GGACFGLLRAYNRGPYDTVDFSDSYG---KQKAMPFGEDPVSHYINS-LKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQAQGLPDDPSRHSAMRIEVQREXXXXXXXXXXXXXXXXXXRCARFLLRRGPEVTDDPVPATDSAPN 509          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D7FV77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV77_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 8.130e-14
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  976 LLRKFSENNSTYGIGLEQRASPFGEHPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRSRIGMDIYDRDELIRAVTAPALVNDEEHSSKMRIFVRREDQGHISVAVSD 1347
            +L KFS  N+TY +    R SPFGEHP      + L  +E I  GV +S    +C   +MV T    A  L   SR  +D+YDRD+LIRA++ P+    +   + ++I+VR+E     S+ +SD
Sbjct:    1 MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVES-LDQVEPIVAGVLVSNMGTVCGAMLMVVTGAAFAGCLCCHSRKALDVYDRDQLIRAISLPSGEGADGKPAAIKIYVRQEQDNAFSIVISD 123          
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Match: D7FRT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT8_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 7.470e-8
Identity = 61/208 (29.33%), Postives = 95/208 (45.67%), Query Frame = 1
Query:  208 EVCGGRGSWDAARIVAVLLAAFSLASWGLELQLEI------AYRDGLVTDLFLRPPPV--WTTDNDTV--WNVIHPNDS---DIEGGTVSNVFGNYSVGTANARYEIN-------NDP-DSILDGEVQIASWNTNADGLTNKLSYDD------GRSGTAHLESFNCTDIEKEVYI----------HVENEDEHWGTVSDCISGPPKVD 720
            E+ G  G  D AR+V++LL  FSLASW LEL +++      AY   L       PPP+  W+  N T   W+V+   +    + +   + NVF         +RY +        ++P D  +DG++ +ASW  N    +N  S DD      G+S T  +E   C+   K   +          +  ++ E WGTV +C  GP ++D
Sbjct:    2 ELFGDCGRRDTARVVSLLLLLFSLASWILELSIDVFPVSNPAYSQTL-------PPPIFKWSASNSTQTSWHVLSLTELPEYEEDWWNLPNVFAT----KGKSRYYVEEYKNYVWSEPQDRYIDGDITVASWPPNGKQHSN-WSPDDKPDLVYGKSDTVMVEGITCSSGGKGANLTNDFVPVTLKNATDDIEEWGTVLECDQGPARID 197          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1052.556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FRU1_ECTSI4.580e-10142.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LC87_ECTSI9.040e-8338.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT6_ECTSI3.440e-8137.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPI8_9PHAE1.290e-7736.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JST2_9PHAE5.030e-7536.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRU0_ECTSI1.250e-7136.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMP8_9PHAE6.190e-6434.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT9_ECTSI1.160e-5633.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV77_ECTSI8.130e-1437.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT8_ECTSI7.470e-829.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1052contigF-serratus_M_contig1052:115433..117828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1470
Cds size1470
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928885.6021564-CDS-F-serratus_M_contig1052:115432..1165091622928885.6021564-CDS-F-serratus_M_contig1052:115432..116509Fucus serratus maleCDSF-serratus_M_contig1052 115433..116509 -
1690962615.197591-CDS-F-serratus_M_contig1052:115432..1165091690962615.197591-CDS-F-serratus_M_contig1052:115432..116509Fucus serratus maleCDSF-serratus_M_contig1052 115433..116509 -
1622928885.6240091-CDS-F-serratus_M_contig1052:117435..1178281622928885.6240091-CDS-F-serratus_M_contig1052:117435..117828Fucus serratus maleCDSF-serratus_M_contig1052 117436..117828 -
1690962615.2082708-CDS-F-serratus_M_contig1052:117435..1178281690962615.2082708-CDS-F-serratus_M_contig1052:117435..117828Fucus serratus maleCDSF-serratus_M_contig1052 117436..117828 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1052.556.1prot_F-serratus_M_contig1052.556.1Fucus serratus malepolypeptideF-serratus_M_contig1052 115433..117828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1052.556.1

>prot_F-serratus_M_contig1052.556.1 ID=prot_F-serratus_M_contig1052.556.1|Name=mRNA_F-serratus_M_contig1052.556.1|organism=Fucus serratus male|type=polypeptide|length=490bp
MTSEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRG
WRAVENRQTVEVTAYPLVEEVCGGRGSWDAARIVAVLLAAFSLASWGLEL
QLEIAYRDGLVTDLFLRPPPVWTTDNDTVWNVIHPNDSDIEGGTVSNVFG
NYSVGTANARYEINNDPDSILDGEVQIASWNTNADGLTNKLSYDDGRSGT
AHLESFNCTDIEKEVYIHVENEDEHWGTVSDCISGPPKVDNTSISPALKI
SKTKGDTYFIVEESVTYPSFLYSVWKADADTSDNEAVMRHVFYISSSARL
VEAVVTEIVHASFSSREPTGGGSFALLRKFSENNSTYGIGLEQRASPFGE
HPMGEQPNAQLSTIETIQRGVTLSLPALLCALWIMVSTLVGIAWSLLLRS
RIGMDIYDRDELIRAVTAPALVNDEEHSSKMRIFVRREDQGHISVAVSDV
KGHPNSWSQSFGRNETVAVDDPVPTSSPNHANEFGGAFVP
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mRNA from alignment at F-serratus_M_contig1052:115433..117828-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1052.556.1 ID=mRNA_F-serratus_M_contig1052.556.1|Name=mRNA_F-serratus_M_contig1052.556.1|organism=Fucus serratus male|type=mRNA|length=2396bp|location=Sequence derived from alignment at F-serratus_M_contig1052:115433..117828- (Fucus serratus male)
ATGACGTCAGAGTGGGACGACAACAATTGGGTGATCCACACGAGAAACGT CAGCAGCACGTACGTCATCGGGGCATCCTTCGTCTTCCTAGCCTACTTTT TGCATCCGGCCGTCGAAAAAGCGTTCCTGAGGGTTAGGGCCTACCGCGGT TGGCGCGCAGTCGAAAACCGCCAAACAGTCGAGGTCACGGCCTATCCTTT AGTCGAAGAGGTATGCGGCGGGCGCGGAAGTTGGGACGCGGCCCGAATAG TGGCGGTGCTACTAGCAGCGTTTTCGCTTGCGTCGTGGGGTCTAGAACTA CAGCTGGAAATCGCTTATAGGGATGGTTTGGTCACCGATCTTTTCCTCCG GCCCCCACCCGTCTGGACAACTGATAATGATACTGTCTGGAATGTGAGTA GAGGCATCTCGAGAAGAGAGTTGATCGGTTATTGCTTCGTGTAGGGCAGA GTGGACCGATTCTCAACAGCCCATTAGCGACCGTGCTTGAGAGATTTAAG GCAAACTTAAACGAGATAGAAAAAAAATAGACAATAACGTTCTAAGCATA CTCTAGAGCTACCCTTGCATACATTATAAAAATCTCAAAATAAGTACACC CTATTATGCAACACTTCGTGGCGGTTAATGTGTAGTATTGTTCCAGGCAC TAACTAGAGTCCAGCATAGAATATGTGAACTGCAAATATAAACAGCGGCG TTATTCGCTGCCCCTAAACCACGGTATATGTCAGATCGCTACCTCTAACA CACGTGTATAGTTTCTTTGTATTTTCTACAATAAACGGTCGTCAGGCCAA TAATCCCGTTAAAACCTTGGCGTGATCGAGTCAACACAGACGTTAAATAA GGGCTTCATTGGTCTGTACGATTGTAACCTCGGAGTAAGCAGCGGAGTGT CCTCAGAGTCTGTACAAGTCCGCTTATCCTGGCAGGTTATGAACGTCCTC GTTTGTTCCTCGGCGCCTCCGTGAACCTCTGCCCTCCCTCCTTCGCAGCA ATATACCATTCGCCCAATTGAAACGTTGCCAGTTCCGCGAAATGTCGAAC GATTGGGCATCCCTCTCCACGTAGACACCTATTCCTTGTGCGTATCTCCT CATTTTCTCCTTCACGCGCCGTGGAATGTCCTAATGATAGGCTCGCACCT CTTGATACACTAGTTGTAAGCACCTCATCCGAGGCAGAACCCATGAGATA TACCGGTCGCATCTCTGAAATTGCGTGTTGTCTAGTCGGGCGCGGTTTCA ATGCGGTCACGTCGCGAACTAGATATTATTACTTTACGACCGGTCCACGC CCTTTGCCATCGCTGCCAGGTGATACATCCTAACGACTCTGATATCGAAG GAGGCACGGTGTCAAACGTCTTCGGAAACTATTCCGTCGGCACAGCGAAC GCAAGGTACGAAATAAATAACGACCCGGATTCAATCCTCGACGGGGAGGT GCAAATTGCCTCCTGGAATACCAACGCGGACGGCCTGACGAATAAACTTT CCTACGACGACGGAAGAAGCGGTACAGCTCACCTCGAGAGTTTCAACTGC ACCGATATCGAGAAGGAAGTATATATTCACGTGGAAAACGAGGACGAACA TTGGGGGACAGTTTCCGACTGCATCAGTGGGCCGCCAAAGGTCGATAACA CATCCATTTCGCCCGCACTTAAGATCAGCAAGACGAAGGGGGACACTTAT TTCATTGTCGAGGAAAGCGTCACCTACCCAAGCTTCCTTTACTCTGTCTG GAAGGCTGATGCCGACACAAGCGACAACGAAGCCGTAATGCGCCATGTCT TCTACATATCATCGTCTGCGCGGCTCGTTGAGGCGGTGGTGACGGAGATC GTGCACGCATCGTTTAGTTCGAGGGAGCCCACCGGAGGCGGATCTTTCGC ATTGCTCCGAAAATTCAGTGAAAATAATTCCACCTACGGGATCGGGTTGG AGCAACGAGCGTCTCCTTTTGGGGAGCACCCAATGGGGGAACAACCCAAC GCTCAACTTTCCACCATAGAGACTATTCAGAGAGGCGTTACGCTGAGCCT CCCCGCACTATTATGCGCCCTGTGGATTATGGTCTCAACACTGGTGGGCA TCGCTTGGTCGCTTTTGTTGCGATCCAGGATAGGTATGGATATCTACGAC CGCGACGAGCTTATCCGCGCTGTGACCGCACCAGCTTTAGTTAACGACGA AGAGCATTCATCCAAGATGCGCATCTTCGTAAGAAGGGAGGACCAGGGGC ATATTAGCGTCGCCGTTAGCGACGTTAAGGGGCACCCGAATAGTTGGTCA CAGAGCTTCGGAAGGAATGAGACCGTCGCGGTTGATGATCCCGTGCCTAC TAGTTCGCCCAACCACGCTAACGAATTTGGCGGTGCCTTCGTACCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1052:115433..117828-

>mRNA_F-serratus_M_contig1052.556.1 ID=mRNA_F-serratus_M_contig1052.556.1|Name=mRNA_F-serratus_M_contig1052.556.1|organism=Fucus serratus male|type=CDS|length=2940bp|location=Sequence derived from alignment at F-serratus_M_contig1052:115433..117828- (Fucus serratus male)
ATGACGTCAGAGTGGGACGACAACAATTGGGTGATCCACACGAGAAACGT
CAGCAGCACGTACGTCATCGGGGCATCCTTCGTCTTCCTAGCCTACTTTT
TGCATCCGGCCGTCGAAAAAGCGTTCCTGAGGGTTAGGGCCTACCGCGGT
TGGCGCGCAGTCGAAAACCGCCAAACAGTCGAGGTCACGGCCTATCCTTT
AGTCGAAGAGGTATGCGGCGGGCGCGGAAGTTGGGACGCGGCCCGAATAG
TGGCGGTGCTACTAGCAGCGTTTTCGCTTGCGTCGTGGGGTCTAGAACTA
CAGCTGGAAATCGCTTATAGGGATGGTTTGGTCACCGATCTTTTCCTCCG
GCCCCCACCCGTCTGGACAACTGATAATGATACTGTCTGGAATATGACGT
CAGAGTGGGACGACAACAATTGGGTGATCCACACGAGAAACGTCAGCAGC
ACGTACGTCATCGGGGCATCCTTCGTCTTCCTAGCCTACTTTTTGCATCC
GGCCGTCGAAAAAGCGTTCCTGAGGGTTAGGGCCTACCGCGGTTGGCGCG
CAGTCGAAAACCGCCAAACAGTCGAGGTCACGGCCTATCCTTTAGTCGAA
GAGGTATGCGGCGGGCGCGGAAGTTGGGACGCGGCCCGAATAGTGGCGGT
GCTACTAGCAGCGTTTTCGCTTGCGTCGTGGGGTCTAGAACTACAGCTGG
AAATCGCTTATAGGGATGGTTTGGTCACCGATCTTTTCCTCCGGCCCCCA
CCCGTCTGGACAACTGATAATGATACTGTCTGGAATGTGATACATCCTAA
CGACTCTGATATCGAAGGAGGCACGGTGTCAAACGTCTTCGGAAACTATT
CCGTCGGCACAGCGAACGCAAGGTACGAAATAAATAACGACCCGGATTCA
ATCCTCGACGGGGAGGTGCAAATTGCCTCCTGGAATACCAACGCGGACGG
CCTGACGAATAAACTTTCCTACGACGACGGAAGAAGCGGTACAGCTCACC
TCGAGAGTTTCAACTGCACCGATATCGAGAAGGAAGTATATATTCACGTG
GAAAACGAGGACGAACATTGGGGGACAGTTTCCGACTGCATCAGTGGGCC
GCCAAAGGTCGATAACACATCCATTTCGCCCGCACTTAAGATCAGCAAGA
CGAAGGGGGACACTTATTTCATTGTCGAGGAAAGCGTCACCTACCCAAGC
TTCCTTTACTCTGTCTGGAAGGCTGATGCCGACACAAGCGACAACGAAGC
CGTAATGCGCCATGTCTTCTACATATCATCGTCTGCGCGGCTCGTTGAGG
CGGTGGTGACGGAGATCGTGCACGCATCGTTTAGTTCGAGGGAGCCCACC
GGAGGCGGATCTTTCGCATTGCTCCGAAAATTCAGTGAAAATAATTCCAC
CTACGGGATCGGGTTGGAGCAACGAGCGTCTCCTTTTGGGGAGCACCCAA
TGGGGGAACAACCCAACGCTCAACTTTCCACCATAGAGACTATTCAGAGA
GGCGTTACGCTGAGCCTCCCCGCACTATTATGCGCCCTGTGGATTATGGT
CTCAACACTGGTGGGCATCGCTTGGTCGCTTTTGTTGCGATCCAGGATAG
GTATGGATATCTACGACCGCGACGAGCTTATCCGCGCTGTGACCGCACCA
GCTTTAGTTAACGACGAAGAGCATTCATCCAAGATGCGCATCTTCGTAAG
AAGGGAGGACCAGGGGCATATTAGCGTCGCCGTTAGCGACGTTAAGGGGC
ACCCGAATAGTTGGTCACAGAGCTTCGGAAGGAATGAGACCGTCGCGGTT
GATGATCCCGTGCCTACTAGTTCGCCCAACCACGCTAACGAATTTGGCGG
TGCCTTCGTACCCGTGATACATCCTAACGACTCTGATATCGAAGGAGGCA
CGGTGTCAAACGTCTTCGGAAACTATTCCGTCGGCACAGCGAACGCAAGG
TACGAAATAAATAACGACCCGGATTCAATCCTCGACGGGGAGGTGCAAAT
TGCCTCCTGGAATACCAACGCGGACGGCCTGACGAATAAACTTTCCTACG
ACGACGGAAGAAGCGGTACAGCTCACCTCGAGAGTTTCAACTGCACCGAT
ATCGAGAAGGAAGTATATATTCACGTGGAAAACGAGGACGAACATTGGGG
GACAGTTTCCGACTGCATCAGTGGGCCGCCAAAGGTCGATAACACATCCA
TTTCGCCCGCACTTAAGATCAGCAAGACGAAGGGGGACACTTATTTCATT
GTCGAGGAAAGCGTCACCTACCCAAGCTTCCTTTACTCTGTCTGGAAGGC
TGATGCCGACACAAGCGACAACGAAGCCGTAATGCGCCATGTCTTCTACA
TATCATCGTCTGCGCGGCTCGTTGAGGCGGTGGTGACGGAGATCGTGCAC
GCATCGTTTAGTTCGAGGGAGCCCACCGGAGGCGGATCTTTCGCATTGCT
CCGAAAATTCAGTGAAAATAATTCCACCTACGGGATCGGGTTGGAGCAAC
GAGCGTCTCCTTTTGGGGAGCACCCAATGGGGGAACAACCCAACGCTCAA
CTTTCCACCATAGAGACTATTCAGAGAGGCGTTACGCTGAGCCTCCCCGC
ACTATTATGCGCCCTGTGGATTATGGTCTCAACACTGGTGGGCATCGCTT
GGTCGCTTTTGTTGCGATCCAGGATAGGTATGGATATCTACGACCGCGAC
GAGCTTATCCGCGCTGTGACCGCACCAGCTTTAGTTAACGACGAAGAGCA
TTCATCCAAGATGCGCATCTTCGTAAGAAGGGAGGACCAGGGGCATATTA
GCGTCGCCGTTAGCGACGTTAAGGGGCACCCGAATAGTTGGTCACAGAGC
TTCGGAAGGAATGAGACCGTCGCGGTTGATGATCCCGTGCCTACTAGTTC
GCCCAACCACGCTAACGAATTTGGCGGTGCCTTCGTACCC
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