mRNA_F-serratus_M_contig1052.554.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI) HSP 1 Score: 231 bits (588), Expect = 4.760e-65 Identity = 147/362 (40.61%), Postives = 199/362 (54.97%), Query Frame = 2 Query: 236 DNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPV--WTTTDDNGTTAWHVIDPDDLITEEGTVSNVLGNFFVGTAKARYEINNDP--------DSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCSDTEGEVDLYVEKQ-----VERWGTVTDCISGASMDNNTSIS-PALKIK-ETGGDTYFIVEESVTYPSFLYSVWKANGTS-----DNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTYDRIEW 1255 + W + T V ST IG SF+FLAY LHPA+E A+ RVRAY WR +E +Q V+VT Y ++ E+ GRG WDAAR++ +LL AFSLASW LEL + + D+ L +PPPV W +DNG WHV++ ++ +E L N F AK+RY + ND D +DGE+ +ASW E L Y + TV V+ CS D V ++ +E WGTV +C G + N T S P++ + GGDT+ IVEE+ +PSFLYSVW A G S D+ + F+I+S+ RL EAVVT IV+ AG GG F LLR +S+ T + E+ Sbjct: 10 NETWTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLNPVDN-PAHLLTQPPPVFKWDAENDNGEVPWHVLNLTEIDSEYQGNWWKLPNVFETFAKSRYYVQNDTYYAWSKRKDRYIDGEIIVASWS--PEEKPDSLIYGQ-SATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGV------AGGGGGACFGLLRAYSKGSDTPEFEEY 361
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI) HSP 1 Score: 214 bits (545), Expect = 3.190e-60 Identity = 145/356 (40.73%), Postives = 195/356 (54.78%), Query Frame = 2 Query: 236 DNNWVIHTRN-VSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTT--TDDNGTTAWHV-----IDPD--------DLITEEGTVSNVLGNFFVGTAKARYEINNDPDSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCS-DTEGEVDLYVEKQVERWGTVTDCISGASMDNNTSISPALKIKETGGDTYF---IVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTYD 1243 D WV+ + T IG +FV LAYFLHPA+E AF R+RAYR WR ++ RQ VEVT+Y L+ EV GGRGSWD+AR +AV+LA FSLASWGLEL + +A + DL RPPPV+ T+D T W V IDPD + + E T +N +++ Y D+ ++GE+ +ASWD L YD +V+S CS +T + ++Y+ + WG DC G T+ PA+ + T GD+ IVEES +YP+FLYSVW A G+ E ++F++ S+ RLVEAV+T IVH GG F LLR FSE Y+ Sbjct: 10 DKTWVLPLADGFDGTLTIGWTFVLLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLASLEG-EADLLNRPPPVFLRPETNDTNTDPWQVLTLSDIDPDYNGNWRGLEHLNVEDTHAN--SRYYIVKDTRDYLGKTAKDTFINGEILVASWDD-----KPSLFYDINGA--NVDSLECSGETLKDAEVYLGTDL--WGNALDCERGPRPTGLTTSPPAVVL--TNGDSGLVSVIVEESSSYPTFLYSVWTAEGSDSVELA--YLFHVHSTVRLVEAVITGIVHGETE--------GGACFGLLRVFSETRVEYE 341
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI) HSP 1 Score: 207 bits (527), Expect = 6.180e-56 Identity = 137/331 (41.39%), Postives = 186/331 (56.19%), Query Frame = 2 Query: 254 HTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEEGTVSNVLGNFFVGTAKARYEI--------NNDPDSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCSDTEGEVDLYVEKQVERWGTVTDCISGASMDNNTSISPALKIKETGGDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFS 1222 H T+ IG SFVFLAYFLHP +E + +VRA R WRAVE + V+VT YP+V EV GRG WDAAR V +LLAAFSL SW LEL L I + + L L P P++ + AW V+ +++ E G L N AK+ Y + + ++ +DGE+ +ASWD D + A Y N T V+S C T G+V LY E WG+ C G +N TS P + ++++ G+ IVEE T+PSFLYSVW A G++D++ + + F+ISS+ RL EAVVT IV+ G++ G G F LLR F+ Sbjct: 17 HLPTQEPTFAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEIDHVEGGARLLNL-PVPIYLVNQTS--LAWQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASWDPDDKHRAG--LYYGSNHTATVDSITCKGTGGDVYLYDEAA---WGSFLWCGEGPLAENKTSSQPVIILEKSEGEVSVIVEEVGTHPSFLYSVWTA-GSADSKELAYS-FHISSTVRLAEAVVTGIVN-----GETGG---GPCFGLLRTFN 329
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE) HSP 1 Score: 199 bits (506), Expect = 4.050e-54 Identity = 122/340 (35.88%), Postives = 172/340 (50.59%), Query Frame = 2 Query: 248 VIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTD----DNGTTAWHVIDPDDLITEEGTVSNVLGNFFVGTAKARYEINNDPDSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCSDTEGEVDLYVE-KQVERWGTVTDCISGASM----DNNTSISPALKIKETGGDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTY 1240 +I T + + + I + L+ LHP V F R+RA W+++E ++ VEVT Y + E G RG WD AR+V +LLAAF +++WGLEL L +A R D DL RPPP+ T + + W VI ++ I E G++ ++ G G A Y I +SI+ G ASW +AS L YD N V CS LY+ ++ +WG V++C SG S+ N+ + P + + T G+ Y IVEE +YPSFLYSVW E H FY+SS+ RLVEA+V+ GG +L KFS + TY Sbjct: 4 IIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIG---ESIIRGNTVFASWSPQSSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWVPGEVKPQEAQLNHAFYVSSTTRLVEAIVS--------GXXXXXXXGGGCLDMLTKFSVQNATY 332
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI) HSP 1 Score: 195 bits (495), Expect = 3.340e-52 Identity = 140/359 (39.00%), Postives = 192/359 (53.48%), Query Frame = 2 Query: 224 SEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEEGTVSNV---LGNFFVGTAKARYEINN-------DP-DSILDGEVQIASWDIDV-EGLA-------SELSYDDGNRTVHVESYNCSDT-----EGEVDLYVEKQVERWGTVTDCISGASMDNN-TSISPALKIKETG-GDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFS 1222 +EW N + T IG SF+ LAYFLHP V A+ RVRAYR WRA+E + VEVTAY +E+ GRG WDA RIV VLL F++ASWGLEL L ++ L +P PV+ DN W V++ D++ E+ + L N AK+ Y + N DP + + GE+ +A+WD + E L+ S SY++G T VE+ NCS + + V + + E WG V +C +G + N PA+ + + G +T+ I+EE+ T+ SFLYSVWK NG S T FH I+S+ RL EAVVT IV G+S+G G F +LR FS Sbjct: 24 AEWPING-------IDGTRAIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLDQYSHENEACPL-TQPSPVYRKDLDNNA-RWQVLNLDEINGEDRDYNGSWLDLPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTNGDSVTLTYAFH---IASTVRLAEAVVTGIVL-----GESSG---GGCFGMLRAFS 362
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE) HSP 1 Score: 189 bits (480), Expect = 4.600e-50 Identity = 134/352 (38.07%), Postives = 190/352 (53.98%), Query Frame = 2 Query: 245 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEE----GTVSNVLGNFFVGTAKARYEINNDPDSI--------LDGEVQIASWDIDVEGLAS--------ELSYDDGNRTVHVESYNCSDTEGEVDLYVEKQV----ERWGTVTDCISGASMDNNTS-ISPALKIKETG-GDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFS 1222 W I+ + T I SF+ LAY LHP V +A+ RVRAYR WRA+EN + VEVTAY +E+ GRG WDA RIV VLL F++ASW LEL L + ++ L +PPPV+ G +W V++ D++ E+ G+ L N AK+ Y + N S + G++ +A+WD + G + SY++ T VE+ +CS + D V +++ E WG V +C G + N + PA+ + + G +T+ I+EE+ T+ SFLYSVWK NG S N + FH I+S+ RL EAVVT IV G+S TGG F +LR FS Sbjct: 26 WPIN--GIDGTRAISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDLYSFENEAYPL-TQPPPVYRENI-QGNASWQVLNLDEINGEDRKYDGSSWFDLPNVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAIAGSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTNGESVNLSYAFH---IASTVRLAEAVVTGIVL-----GES---TGGGCFGMLRAFS 362
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI) HSP 1 Score: 187 bits (474), Expect = 1.750e-49 Identity = 141/382 (36.91%), Postives = 203/382 (53.14%), Query Frame = 2 Query: 206 GNPGMTSEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGI------AYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITE-EGTVSNVLGNFFVGTAKARYEIN-------NDP-DSILDGEVQIASWDIDVEGLASELSYDDGNR-TVHVESYNCSDTEGEVDLYVEKQV-----------ERWGTVTDCISG-ASMDNNTSISPALKIKETG-GDTYFIVEESVTYPSFLYSVWKANGTS-----DNETVRF-HVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSE-KYPTYD 1243 G+P + S W + T +++T VIG +++FLAY +HPA + A+LRVRAYR WR +E + V+VT YP E+ G G D AR+VA+LL F+LASW L+L + + AY L +F W ++ G +WHV+ ++ E EG N N F AK+RY + ++P D ++G++ +A+W + + L Y G R TV V+ CS + GE D++ + + E WGTV +C G A +D S P++ + E GDT+ IVEE+ + PSFLYSVW A G S N +V + F+ISS+ RL EAVVT IV+ AG GG F LLR ++ Y T D Sbjct: 2 GSPSLGSR----KWDLPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDVFPVPNPAYSQTLAPQVFK-----WPASNSTGA-SWHVLSLTEIDQEYEGDWLN-QPNVFETVAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRNTK--PDNLVY--GERATVMVDGITCS-SGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGV------AGEGGGACFGLLRAYNRGPYDTVD 361
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE) HSP 1 Score: 186 bits (473), Expect = 6.510e-49 Identity = 142/368 (38.59%), Postives = 193/368 (52.45%), Query Frame = 2 Query: 245 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGI------AYRDDLVTDLFLRPPPVWTTTDDNGT-TAWHVIDPDDLITE-EGTVSNVLGNFFVGTAKARY---EINNDP-----DSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCS---------DTEGEVDLYVEKQVERWGTVTDCISGASMDN---NTSISPALKIKETGGDTYFIVEESVTYPSFLYSVWKANGTS-----DNETVRF-HVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSE-KYPTYD 1243 W + T +++T VIG +++FLAY +HP + A+LRVRAYR WR +E + V+VT YP E+ GG D AR+VA+LL F+LA W LEL + AY L PPPV+ + N T T WHV+ +++ E EG N N F AK+RY E N P D ++G++ +A+W + + L Y + N TV V+ CS D V L +E WGTV +C G ++ N+ S L +ETG DT+ IVEE+ + PSFLYSVW A G S N +V + F+ISS+ RL EAVVT IV+ DG GG F LLR ++ Y T D Sbjct: 11 WELPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDWFPVSVPAYSQTL-------PPPVFQWSAGNSTPTPWHVLSLNEIAPEYEGDWLN-QPNVFETVAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRNTK--PDNLVYGE-NATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVEVIGNSKPSIILTERETG-DTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDG------GGACFGLLRAYNRGPYDTRD 360 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1052.554.1 >prot_F-serratus_M_contig1052.554.1 ID=prot_F-serratus_M_contig1052.554.1|Name=mRNA_F-serratus_M_contig1052.554.1|organism=Fucus serratus male|type=polypeptide|length=346bp MTSEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGback to top mRNA from alignment at F-serratus_M_contig1052:6107..8335- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1052.554.1 ID=mRNA_F-serratus_M_contig1052.554.1|Name=mRNA_F-serratus_M_contig1052.554.1|organism=Fucus serratus male|type=mRNA|length=2229bp|location=Sequence derived from alignment at F-serratus_M_contig1052:6107..8335- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1052:6107..8335- >mRNA_F-serratus_M_contig1052.554.1 ID=mRNA_F-serratus_M_contig1052.554.1|Name=mRNA_F-serratus_M_contig1052.554.1|organism=Fucus serratus male|type=CDS|length=2076bp|location=Sequence derived from alignment at F-serratus_M_contig1052:6107..8335- (Fucus serratus male)back to top |