mRNA_F-serratus_M_contig1052.554.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1052.554.1
Unique NamemRNA_F-serratus_M_contig1052.554.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 4.760e-65
Identity = 147/362 (40.61%), Postives = 199/362 (54.97%), Query Frame = 2
Query:  236 DNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPV--WTTTDDNGTTAWHVIDPDDLITEEGTVSNVLGNFFVGTAKARYEINNDP--------DSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCSDTEGEVDLYVEKQ-----VERWGTVTDCISGASMDNNTSIS-PALKIK-ETGGDTYFIVEESVTYPSFLYSVWKANGTS-----DNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTYDRIEW 1255
            +  W + T  V ST  IG SF+FLAY LHPA+E A+ RVRAY  WR +E +Q V+VT Y ++ E+  GRG WDAAR++ +LL AFSLASW LEL + +   D+    L  +PPPV  W   +DNG   WHV++  ++ +E       L N F   AK+RY + ND         D  +DGE+ +ASW    E     L Y   + TV V+   CS      D  V ++     +E WGTV +C  G  + N T  S P++ +    GGDT+ IVEE+  +PSFLYSVW A G S     D+     + F+I+S+ RL EAVVT IV+        AG  GG  F LLR +S+   T +  E+
Sbjct:   10 NETWTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLNPVDN-PAHLLTQPPPVFKWDAENDNGEVPWHVLNLTEIDSEYQGNWWKLPNVFETFAKSRYYVQNDTYYAWSKRKDRYIDGEIIVASWS--PEEKPDSLIYGQ-SATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGV------AGGGGGACFGLLRAYSKGSDTPEFEEY 361          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.190e-60
Identity = 145/356 (40.73%), Postives = 195/356 (54.78%), Query Frame = 2
Query:  236 DNNWVIHTRN-VSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTT--TDDNGTTAWHV-----IDPD--------DLITEEGTVSNVLGNFFVGTAKARYEINNDPDSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCS-DTEGEVDLYVEKQVERWGTVTDCISGASMDNNTSISPALKIKETGGDTYF---IVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTYD 1243
            D  WV+   +    T  IG +FV LAYFLHPA+E AF R+RAYR WR ++ RQ VEVT+Y L+ EV GGRGSWD+AR +AV+LA FSLASWGLEL + +A  +    DL  RPPPV+    T+D  T  W V     IDPD        + +  E T +N    +++      Y      D+ ++GE+ +ASWD         L YD      +V+S  CS +T  + ++Y+   +  WG   DC  G      T+  PA+ +  T GD+     IVEES +YP+FLYSVW A G+   E    ++F++ S+ RLVEAV+T IVH            GG  F LLR FSE    Y+
Sbjct:   10 DKTWVLPLADGFDGTLTIGWTFVLLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLASLEG-EADLLNRPPPVFLRPETNDTNTDPWQVLTLSDIDPDYNGNWRGLEHLNVEDTHAN--SRYYIVKDTRDYLGKTAKDTFINGEILVASWDD-----KPSLFYDINGA--NVDSLECSGETLKDAEVYLGTDL--WGNALDCERGPRPTGLTTSPPAVVL--TNGDSGLVSVIVEESSSYPTFLYSVWTAEGSDSVELA--YLFHVHSTVRLVEAVITGIVHGETE--------GGACFGLLRVFSETRVEYE 341          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 6.180e-56
Identity = 137/331 (41.39%), Postives = 186/331 (56.19%), Query Frame = 2
Query:  254 HTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEEGTVSNVLGNFFVGTAKARYEI--------NNDPDSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCSDTEGEVDLYVEKQVERWGTVTDCISGASMDNNTSISPALKIKETGGDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFS 1222
            H      T+ IG SFVFLAYFLHP +E  + +VRA R WRAVE  + V+VT YP+V EV  GRG WDAAR V +LLAAFSL SW LEL L I + +     L L P P++     +   AW V+  +++  E G     L N     AK+ Y +        +   ++ +DGE+ +ASWD D +  A    Y   N T  V+S  C  T G+V LY E     WG+   C  G   +N TS  P + ++++ G+   IVEE  T+PSFLYSVW A G++D++ + +  F+ISS+ RL EAVVT IV+     G++ G   G  F LLR F+
Sbjct:   17 HLPTQEPTFAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEIDHVEGGARLLNL-PVPIYLVNQTS--LAWQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASWDPDDKHRAG--LYYGSNHTATVDSITCKGTGGDVYLYDEAA---WGSFLWCGEGPLAENKTSSQPVIILEKSEGEVSVIVEEVGTHPSFLYSVWTA-GSADSKELAYS-FHISSTVRLAEAVVTGIVN-----GETGG---GPCFGLLRTFN 329          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 4.050e-54
Identity = 122/340 (35.88%), Postives = 172/340 (50.59%), Query Frame = 2
Query:  248 VIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTD----DNGTTAWHVIDPDDLITEEGTVSNVLGNFFVGTAKARYEINNDPDSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCSDTEGEVDLYVE-KQVERWGTVTDCISGASM----DNNTSISPALKIKETGGDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTY 1240
            +I T + +  + I    + L+  LHP V   F R+RA   W+++E ++ VEVT Y +  E  G RG WD AR+V +LLAAF +++WGLEL L +A R D   DL  RPPP+   T      +  + W VI  ++ I E G++ ++ G    G A   Y I    +SI+ G    ASW      +AS L YD  N    V    CS       LY+  ++  +WG V++C SG S+     N+ +  P + +  T G+ Y IVEE  +YPSFLYSVW        E    H FY+SS+ RLVEA+V+                GG    +L KFS +  TY
Sbjct:    4 IIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIG---ESIIRGNTVFASWSPQSSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWVPGEVKPQEAQLNHAFYVSSTTRLVEAIVS--------GXXXXXXXGGGCLDMLTKFSVQNATY 332          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 3.340e-52
Identity = 140/359 (39.00%), Postives = 192/359 (53.48%), Query Frame = 2
Query:  224 SEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEEGTVSNV---LGNFFVGTAKARYEINN-------DP-DSILDGEVQIASWDIDV-EGLA-------SELSYDDGNRTVHVESYNCSDT-----EGEVDLYVEKQVERWGTVTDCISGASMDNN-TSISPALKIKETG-GDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFS 1222
            +EW  N        +  T  IG SF+ LAYFLHP V  A+ RVRAYR WRA+E  + VEVTAY   +E+  GRG WDA RIV VLL  F++ASWGLEL L     ++    L  +P PV+    DN    W V++ D++  E+   +     L N     AK+ Y + N       DP +  + GE+ +A+WD  + E L+       S  SY++G  T  VE+ NCS +     +  V   +  + E WG V +C +G  + N      PA+ + + G  +T+ I+EE+ T+ SFLYSVWK NG S   T  FH   I+S+ RL EAVVT IV      G+S+G   G  F +LR FS
Sbjct:   24 AEWPING-------IDGTRAIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLDQYSHENEACPL-TQPSPVYRKDLDNNA-RWQVLNLDEINGEDRDYNGSWLDLPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTNGDSVTLTYAFH---IASTVRLAEAVVTGIVL-----GESSG---GGCFGMLRAFS 362          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 4.600e-50
Identity = 134/352 (38.07%), Postives = 190/352 (53.98%), Query Frame = 2
Query:  245 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEE----GTVSNVLGNFFVGTAKARYEINNDPDSI--------LDGEVQIASWDIDVEGLAS--------ELSYDDGNRTVHVESYNCSDTEGEVDLYVEKQV----ERWGTVTDCISGASMDNNTS-ISPALKIKETG-GDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFS 1222
            W I+   +  T  I  SF+ LAY LHP V +A+ RVRAYR WRA+EN + VEVTAY   +E+  GRG WDA RIV VLL  F++ASW LEL L +   ++    L  +PPPV+      G  +W V++ D++  E+    G+    L N     AK+ Y + N   S         + G++ +A+WD  + G  +          SY++   T  VE+ +CS +    D  V +++    E WG V +C  G  + N +    PA+ + + G  +T+ I+EE+ T+ SFLYSVWK NG S N +  FH   I+S+ RL EAVVT IV      G+S   TGG  F +LR FS
Sbjct:   26 WPIN--GIDGTRAISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDLYSFENEAYPL-TQPPPVYRENI-QGNASWQVLNLDEINGEDRKYDGSSWFDLPNVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAIAGSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTNGESVNLSYAFH---IASTVRLAEAVVTGIVL-----GES---TGGGCFGMLRAFS 362          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.750e-49
Identity = 141/382 (36.91%), Postives = 203/382 (53.14%), Query Frame = 2
Query:  206 GNPGMTSEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGI------AYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITE-EGTVSNVLGNFFVGTAKARYEIN-------NDP-DSILDGEVQIASWDIDVEGLASELSYDDGNR-TVHVESYNCSDTEGEVDLYVEKQV-----------ERWGTVTDCISG-ASMDNNTSISPALKIKETG-GDTYFIVEESVTYPSFLYSVWKANGTS-----DNETVRF-HVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSE-KYPTYD 1243
            G+P + S      W + T  +++T VIG +++FLAY +HPA + A+LRVRAYR WR +E  + V+VT YP   E+ G  G  D AR+VA+LL  F+LASW L+L + +      AY   L   +F      W  ++  G  +WHV+   ++  E EG   N   N F   AK+RY +        ++P D  ++G++ +A+W  + +     L Y  G R TV V+   CS + GE D++ +  +           E WGTV +C  G A +D   S  P++ + E   GDT+ IVEE+ + PSFLYSVW A G S      N +V   + F+ISS+ RL EAVVT IV+        AG  GG  F LLR ++   Y T D
Sbjct:    2 GSPSLGSR----KWDLPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDVFPVPNPAYSQTLAPQVFK-----WPASNSTGA-SWHVLSLTEIDQEYEGDWLN-QPNVFETVAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRNTK--PDNLVY--GERATVMVDGITCS-SGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGV------AGEGGGACFGLLRAYNRGPYDTVD 361          
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 6.510e-49
Identity = 142/368 (38.59%), Postives = 193/368 (52.45%), Query Frame = 2
Query:  245 WVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRGWRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLELQLGI------AYRDDLVTDLFLRPPPVWTTTDDNGT-TAWHVIDPDDLITE-EGTVSNVLGNFFVGTAKARY---EINNDP-----DSILDGEVQIASWDIDVEGLASELSYDDGNRTVHVESYNCS---------DTEGEVDLYVEKQVERWGTVTDCISGASMDN---NTSISPALKIKETGGDTYFIVEESVTYPSFLYSVWKANGTS-----DNETVRF-HVFYISSSARLVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSE-KYPTYD 1243
            W + T  +++T VIG +++FLAY +HP  + A+LRVRAYR WR +E  + V+VT YP   E+ GG    D AR+VA+LL  F+LA W LEL +        AY   L       PPPV+  +  N T T WHV+  +++  E EG   N   N F   AK+RY   E  N P     D  ++G++ +A+W  + +     L Y + N TV V+   CS         D    V L     +E WGTV +C  G ++     N+  S  L  +ETG DT+ IVEE+ + PSFLYSVW A G S      N +V   + F+ISS+ RL EAVVT IV+    DG      GG  F LLR ++   Y T D
Sbjct:   11 WELPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDWFPVSVPAYSQTL-------PPPVFQWSAGNSTPTPWHVLSLNEIAPEYEGDWLN-QPNVFETVAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRNTK--PDNLVYGE-NATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVEVIGNSKPSIILTERETG-DTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDG------GGACFGLLRAYNRGPYDTRD 360          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1052.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FRU0_ECTSI4.760e-6540.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRU1_ECTSI3.190e-6040.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LC87_ECTSI6.180e-5641.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPI8_9PHAE4.050e-5435.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT6_ECTSI3.340e-5239.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JST2_9PHAE4.600e-5038.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT9_ECTSI1.750e-4936.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMP8_9PHAE6.510e-4938.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1052contigF-serratus_M_contig1052:6107..8335 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1256
Cds size1038
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1052.554.1prot_F-serratus_M_contig1052.554.1Fucus serratus malepolypeptideF-serratus_M_contig1052 6107..8118 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928885.3677654-CDS-F-serratus_M_contig1052:6106..67421622928885.3677654-CDS-F-serratus_M_contig1052:6106..6742Fucus serratus maleCDSF-serratus_M_contig1052 6107..6742 -
1690962615.116899-CDS-F-serratus_M_contig1052:6106..67421690962615.116899-CDS-F-serratus_M_contig1052:6106..6742Fucus serratus maleCDSF-serratus_M_contig1052 6107..6742 -
1622928885.3842397-CDS-F-serratus_M_contig1052:7716..81181622928885.3842397-CDS-F-serratus_M_contig1052:7716..8118Fucus serratus maleCDSF-serratus_M_contig1052 7717..8118 -
1690962615.1307235-CDS-F-serratus_M_contig1052:7716..81181690962615.1307235-CDS-F-serratus_M_contig1052:7716..8118Fucus serratus maleCDSF-serratus_M_contig1052 7717..8118 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928885.4006255-UTR-F-serratus_M_contig1052:8118..83351622928885.4006255-UTR-F-serratus_M_contig1052:8118..8335Fucus serratus maleUTRF-serratus_M_contig1052 8119..8335 -
1690962615.1427844-UTR-F-serratus_M_contig1052:8118..83351690962615.1427844-UTR-F-serratus_M_contig1052:8118..8335Fucus serratus maleUTRF-serratus_M_contig1052 8119..8335 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1052.554.1

>prot_F-serratus_M_contig1052.554.1 ID=prot_F-serratus_M_contig1052.554.1|Name=mRNA_F-serratus_M_contig1052.554.1|organism=Fucus serratus male|type=polypeptide|length=346bp
MTSEWDDNNWVIHTRNVSSTYVIGASFVFLAYFLHPAVEKAFLRVRAYRG
WRAVENRQTVEVTAYPLVKEVCGGRGSWDAARIVAVLLAAFSLASWGLEL
QLGIAYRDDLVTDLFLRPPPVWTTTDDNGTTAWHVIDPDDLITEEGTVSN
VLGNFFVGTAKARYEINNDPDSILDGEVQIASWDIDVEGLASELSYDDGN
RTVHVESYNCSDTEGEVDLYVEKQVERWGTVTDCISGASMDNNTSISPAL
KIKETGGDTYFIVEESVTYPSFLYSVWKANGTSDNETVRFHVFYISSSAR
LVEAVVTEIVHASLRDGDSAGPTGGRSFALLRKFSEKYPTYDRIEW
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mRNA from alignment at F-serratus_M_contig1052:6107..8335-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1052.554.1 ID=mRNA_F-serratus_M_contig1052.554.1|Name=mRNA_F-serratus_M_contig1052.554.1|organism=Fucus serratus male|type=mRNA|length=2229bp|location=Sequence derived from alignment at F-serratus_M_contig1052:6107..8335- (Fucus serratus male)
ATCGTGCTTTGTGGGTTCAATTACTCACTGCTTGGGCCCGGCATCTCAGT CGAGAGTTCCAAGCAGAACGAGATTCGCGGCTTTCTAGCACGGGCCGCAA GCGAGTTATATGGTCGACACGAACACAGGCTTGAGTCTATACTGAGGCGT GGCAACAAAAAACGTTCAGCGCACCAAAGCTGTCAAGCGAGAGAAACCAT CCGCGGGGAATCCAGGGATGACGTCAGAGTGGGACGACAACAACTGGGTG ATCCACACGAGAAACGTCAGCAGCACGTACGTCATCGGGGCATCCTTCGT CTTCCTAGCCTACTTTTTGCATCCGGCCGTCGAAAAAGCGTTCCTGAGGG TTAGGGCCTACCGCGGTTGGCGCGCAGTCGAAAACCGCCAAACAGTCGAG GTCACGGCCTATCCTCTAGTCAAAGAGGTATGCGGCGGGCGCGGAAGTTG GGACGCGGCCCGAATAGTGGCGGTGCTACTAGCAGCGTTTTCGCTTGCGT CGTGGGGTCTAGAACTACAGCTGGGAATCGCTTATAGGGATGATTTGGTC ACCGATCTTTTCCTCCGGCCCCCACCCGTCTGGACAACAACTGATGATAA TGGTACTACTGCCTGGCATGTGAGTAGAGGCATCTCGAGAAGAGAGTTGA TCGGTTATTGCTTCGTGCAGGGCAGAGTGGGCCGATTCTCAACAGACCGT TAGCGACCGTGCTTGAAAGATTTAGAGCAAACTTAAACGAGATAGAAAAA AAATAGACAATAAAGTTCTACTGTAAGTATACTCTAGAGCTACCCTTGCA TACATTATAAAAATATTAAAATAAGTACACCTATTATGCAACACTTCGTG GAGGTTACTGTGTAGTATTGTTCCAGGCACAAACTAGAGTCCAGCATAGA ATAGGTGAACTGCAGATATAAACAGCGGCGTTATTCGCTGCCACTAGACC ACGGTATATGTCAGATCGCTACCTCTAACACACGTGTATAGTTTCTTTGT ATTATCTATAATAAACGGTCGCTAGGCCAATATTCCCGTTAACCTTGGCG CGACCGAGTCAACACAAACGTTAAGAAAGGGCTTTATTGGTCTGTACGGT TGTAACGTCGGGGTAAACAGCGACGTGTTCTCAGAGTCTGTACAAGTCCG CTTATCCTGGCAGGTTATGAACGTCCTCTTTTGTTCCTCAGCACGTCCGT GAACCTCTGCCCTCCCTCCTTCAAAGCAATATACCATTCGCCAAATTGAA ACGTTGCCAGTTCCCCGAAATATCGAACGATTGGGCGTCCCTCTCCACGT AGACACCTATTCCTTGTGCATACCTCCTCATTTTCTCCTTAACGCGCAGT GAAATGTCCTAATGATAATATTTCCGGGTGATTGTTAGGCATGCATACAT ATGACTACCCTCGCACCTCTTGATACAGTATTATTAATAGTTGTAAGCAC CTCATCCGAAGCAGAACCCATGAGATTTACCGGTCGCATCTCTGAAATTA CGTGTCTAGTCGGGCGCGGTTTCAATGCGGTCACGTCGCGAACTGGATAC TAATACTTTACGACCGGTCCACGCCCTTTGCCATCGCTGCCAGGTGATAG ATCCTGACGACCTTATTACCGAAGAAGGCACGGTGTCAAACGTCTTGGGA AACTTTTTCGTCGGCACAGCGAAGGCAAGGTACGAAATAAATAACGACCC GGATTCAATCCTCGACGGGGAGGTGCAAATTGCCTCCTGGGATATCGACG TGGAAGGCCTGGCGAGTGAACTTTCCTACGACGACGGAAACCGTACTGTT CACGTCGAGAGTTACAATTGCTCCGACACCGAAGGTGAAGTAGACCTTTA CGTGGAAAAACAGGTTGAACGGTGGGGGACAGTTACCGACTGCATCAGTG GGGCATCAATGGACAATAACACATCCATTTCGCCCGCACTTAAGATCAAA GAGACGGGCGGGGACACTTATTTCATTGTCGAGGAAAGTGTTACCTACCC AAGCTTCCTTTACTCTGTCTGGAAGGCTAATGGCACAAGCGACAACGAAA CCGTAAGGTTCCATGTCTTCTATATCTCATCGTCTGCGCGGCTCGTTGAG GCGGTGGTGACGGAGATCGTGCACGCATCGCTTAGAGACGGTGATTCGGC GGGGCCCACCGGAGGCAGGTCTTTCGCATTGCTCCGAAAATTCAGTGAAA AATATCCCACCTATGACAGGATCGAGTGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1052:6107..8335-

>mRNA_F-serratus_M_contig1052.554.1 ID=mRNA_F-serratus_M_contig1052.554.1|Name=mRNA_F-serratus_M_contig1052.554.1|organism=Fucus serratus male|type=CDS|length=2076bp|location=Sequence derived from alignment at F-serratus_M_contig1052:6107..8335- (Fucus serratus male)
ATGACGTCAGAGTGGGACGACAACAACTGGGTGATCCACACGAGAAACGT
CAGCAGCACGTACGTCATCGGGGCATCCTTCGTCTTCCTAGCCTACTTTT
TGCATCCGGCCGTCGAAAAAGCGTTCCTGAGGGTTAGGGCCTACCGCGGT
TGGCGCGCAGTCGAAAACCGCCAAACAGTCGAGGTCACGGCCTATCCTCT
AGTCAAAGAGGTATGCGGCGGGCGCGGAAGTTGGGACGCGGCCCGAATAG
TGGCGGTGCTACTAGCAGCGTTTTCGCTTGCGTCGTGGGGTCTAGAACTA
CAGCTGGGAATCGCTTATAGGGATGATTTGGTCACCGATCTTTTCCTCCG
GCCCCCACCCGTCTGGACAACAACTGATGATAATGGTACTACTGCCTGGC
ATATGACGTCAGAGTGGGACGACAACAACTGGGTGATCCACACGAGAAAC
GTCAGCAGCACGTACGTCATCGGGGCATCCTTCGTCTTCCTAGCCTACTT
TTTGCATCCGGCCGTCGAAAAAGCGTTCCTGAGGGTTAGGGCCTACCGCG
GTTGGCGCGCAGTCGAAAACCGCCAAACAGTCGAGGTCACGGCCTATCCT
CTAGTCAAAGAGGTATGCGGCGGGCGCGGAAGTTGGGACGCGGCCCGAAT
AGTGGCGGTGCTACTAGCAGCGTTTTCGCTTGCGTCGTGGGGTCTAGAAC
TACAGCTGGGAATCGCTTATAGGGATGATTTGGTCACCGATCTTTTCCTC
CGGCCCCCACCCGTCTGGACAACAACTGATGATAATGGTACTACTGCCTG
GCATGTGATAGATCCTGACGACCTTATTACCGAAGAAGGCACGGTGTCAA
ACGTCTTGGGAAACTTTTTCGTCGGCACAGCGAAGGCAAGGTACGAAATA
AATAACGACCCGGATTCAATCCTCGACGGGGAGGTGCAAATTGCCTCCTG
GGATATCGACGTGGAAGGCCTGGCGAGTGAACTTTCCTACGACGACGGAA
ACCGTACTGTTCACGTCGAGAGTTACAATTGCTCCGACACCGAAGGTGAA
GTAGACCTTTACGTGGAAAAACAGGTTGAACGGTGGGGGACAGTTACCGA
CTGCATCAGTGGGGCATCAATGGACAATAACACATCCATTTCGCCCGCAC
TTAAGATCAAAGAGACGGGCGGGGACACTTATTTCATTGTCGAGGAAAGT
GTTACCTACCCAAGCTTCCTTTACTCTGTCTGGAAGGCTAATGGCACAAG
CGACAACGAAACCGTAAGGTTCCATGTCTTCTATATCTCATCGTCTGCGC
GGCTCGTTGAGGCGGTGGTGACGGAGATCGTGCACGCATCGCTTAGAGAC
GGTGATTCGGCGGGGCCCACCGGAGGCAGGTCTTTCGCATTGCTCCGAAA
ATTCAGTGAAAAATATCCCACCTATGACAGGATCGAGTGGGTGATAGATC
CTGACGACCTTATTACCGAAGAAGGCACGGTGTCAAACGTCTTGGGAAAC
TTTTTCGTCGGCACAGCGAAGGCAAGGTACGAAATAAATAACGACCCGGA
TTCAATCCTCGACGGGGAGGTGCAAATTGCCTCCTGGGATATCGACGTGG
AAGGCCTGGCGAGTGAACTTTCCTACGACGACGGAAACCGTACTGTTCAC
GTCGAGAGTTACAATTGCTCCGACACCGAAGGTGAAGTAGACCTTTACGT
GGAAAAACAGGTTGAACGGTGGGGGACAGTTACCGACTGCATCAGTGGGG
CATCAATGGACAATAACACATCCATTTCGCCCGCACTTAAGATCAAAGAG
ACGGGCGGGGACACTTATTTCATTGTCGAGGAAAGTGTTACCTACCCAAG
CTTCCTTTACTCTGTCTGGAAGGCTAATGGCACAAGCGACAACGAAACCG
TAAGGTTCCATGTCTTCTATATCTCATCGTCTGCGCGGCTCGTTGAGGCG
GTGGTGACGGAGATCGTGCACGCATCGCTTAGAGACGGTGATTCGGCGGG
GCCCACCGGAGGCAGGTCTTTCGCATTGCTCCGAAAATTCAGTGAAAAAT
ATCCCACCTATGACAGGATCGAGTGG
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