mRNA_F-serratus_M_contig1051.545.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2WIF9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WIF9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.850e-21 Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 +++++ A AD+ FRE VDW+GLGL DYP II +PMDLG VK ++ Y E A DVRLIW NC TYN G + A +SK+FE +F KL Sbjct: 11 LSKLLGHFYAKADAEPFREAVDWKGLGLFDYPQIIKKPMDLGQVKRNIETSKYKTIHEAAEDVRLIWKNCMTYNADG--SDFYILAQNMSKKFEDKFSKL 108
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S1XM82_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM82_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.160e-21 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGA 315 MA + L +++ F EPVDW+G+GL DYP II PMDLGTV+ +L Y A E A D+RL+W NC TYN G +K A+ SK+FE +F + +A A Sbjct: 12 MASGLGFLDKQQEAYIFAEPVDWKGMGLFDYPQIIKHPMDLGTVRQKLNNKEYRTASECAEDIRLVWRNCMTYNQDG--SDFYKIAERFSKKFETKFAPVAKAEA 114
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0F5U8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F5U8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.790e-21 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 +++I+ +++A AD+ FREPVDW+GLG+ DYP II +PMDLGTVK R+ Y+ + A DVRL+W NC TYN G A LSK +E +F K Sbjct: 12 LSKIVTAVMARADAAPFREPVDWKGLGIMDYPQIIKKPMDLGTVKKRISGRKYNTVFDAANDVRLVWTNCMTYNQDG--SDFFVIAKRLSKLWEDKFAKF 109
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A0G4J1W6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J1W6_PLABS) HSP 1 Score: 99.4 bits (246), Expect = 2.820e-21 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 10 IIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 I+ + A AD+ F +PVDW LG+ DYP II PMDLGT+K +L+ G Y+ EFA DVRL W+N +TYN G ++ AAD LSK F+ R KL Sbjct: 81 ILKQVAARADAAPFLDPVDWEELGIPDYPEIIKNPMDLGTIKKKLEDGKYANEQEFADDVRLTWNNAKTYNQPG--SGIYVAADNLSKLFDRRMQKL 175
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0UGI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGI7_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.350e-21 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M++++ S++ +D+ FR PVDW+G+GL DYP +I +PMDLG+VK + Y E A D+RL+W NC TYN G L A LSK+FE ++ KL Sbjct: 12 MSKVLQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGSVKRNINARKYKSIPEAAEDIRLVWTNCMTYNQDGSDFFL--LAKNLSKKFEEKYSKL 109 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1051.545.1 >prot_F-serratus_M_contig1051.545.1 ID=prot_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=polypeptide|length=142bp MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQback to top mRNA from alignment at F-serratus_M_contig1051:180369..181457+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1051.545.1 ID=mRNA_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=mRNA|length=1089bp|location=Sequence derived from alignment at F-serratus_M_contig1051:180369..181457+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1051:180369..181457+ >mRNA_F-serratus_M_contig1051.545.1 ID=mRNA_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=CDS|length=852bp|location=Sequence derived from alignment at F-serratus_M_contig1051:180369..181457+ (Fucus serratus male)back to top |