mRNA_F-serratus_M_contig1051.545.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A448ZMK4_9STRA (Bromo domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMK4_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.260e-23 Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 + +I++SLLA+ D FREPVDWRGL L DYP +I MDLGT+K RL++G YS A + A D+RL+W NC TYN G L A ++RFE R+ K+ Sbjct: 14 ITKIVNSLLANEDCAPFREPVDWRGLELFDYPQVIETMMDLGTIKRRLERGHYSTAHQVAEDIRLVWRNCMTYNADGSDFWL--LAKSYARRFEDRYRKI 111
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A1Z5KMF2_FISSO (Bromodomain-containing protein 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMF2_FISSO) HSP 1 Score: 103 bits (257), Expect = 5.090e-23 Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGAGVG 324 M +I+++ LA DS FREPVDWRGL LHDYP II MDLGT+K +L++ Y A + A+D+RL+W NC TYN G L A S+RFE R+ ++ +A VG Sbjct: 14 MTKIVNAFLARPDSGPFREPVDWRGLELHDYPEIIKHMMDLGTIKRKLERNQYQTAAQVASDIRLVWSNCMTYNAEGSDFWL--LAKGFSRRFEDRYRRV-KADVDVG 118
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A448YXV5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXV5_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.920e-23 Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M++I+ S++ +D+ FR PVDW+G+GL DYP +I +PMDLGTVK + Y E A D+RL+W NC TYN G + A LSKRFE ++ KL Sbjct: 12 MSKILQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGTVKRNINSRKYKSIPEAAEDIRLVWTNCMTYNQDG--SDFYILAKNLSKRFEEKYAKL 109
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S3PZ05_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ05_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.950e-23 Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL----------GEAGAG 318 M +++ + + +S FR+ VDW LGL+DYP I+ RPMDLG +K ++++ Y+ ++ A DVRL+W NC+TYN G + AD LS +FE +F KL G++GAG Sbjct: 9 MGKLVQQIYSKGESEPFRDAVDWESLGLYDYPQIVKRPMDLGQIKRKIEKEEYASVNDAANDVRLVWQNCKTYNADG--SDFYNLADTLSTKFEDKFAKLLKELGLEAADGKSGAG 122
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: W7TT69_9STRA (Bromodomain containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT69_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.770e-23 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M Q++ L D AF EPVDW+ LGL DYP++I+ PMDLGT+K RL+ G Y+ + A DVRL+W+NC+TYN G L+K AD L+ +FE ++ K+ Sbjct: 9 MYQLVQWLSNQKDVDAFLEPVDWKTLGLTDYPLVISTPMDLGTIKGRLESGHYTKHAQVAEDVRLVWNNCKTYNQEG--SYLYKIADKLAGKFEEKYSKI 106
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7R9VVT0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVT0_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.270e-22 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 MA+++ + A +D+ FREPVDW+ LGL DYP II +PMDLG VK +++ G Y + A DVRLIW NC YN G A +SK+FE +F KL Sbjct: 11 MAKLVAQIYAKSDAEPFREPVDWKSLGLFDYPQIIKKPMDLGQVKRKIETGKYGAIHDAAEDVRLIWKNCMQYNADG--SDFFILAQNMSKKFEDKFAKL 108
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0DN66_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DN66_9EUKA) HSP 1 Score: 101 bits (251), Expect = 2.020e-22 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 7 QIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRK-LHKAADVLSKRFEARFVKLGEA 309 +I+ S+ A +D+ F EPVDW+ L DYP+II RPMDLGT++ R+ G YS A+EFA DVRL+W N + YN +P ++K ++ LS+ FE RF KL ++ Sbjct: 27 EILKSVQAKSDAHPFLEPVDWKRFDLPDYPIIIKRPMDLGTIEKRIFDGFYSTANEFALDVRLVWSNAQKYN---LPMSDIYKMSESLSRFFERRFAKLAKS 125
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: B8BSQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSQ7_THAPS) HSP 1 Score: 100 bits (249), Expect = 2.290e-22 Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGE 306 M++++ A AD+ FREPVD++ LGL DYP+++ +PMDLG VK +L + Y + A DVRLIW NC TYN G + A ++K+FE +F KL E Sbjct: 8 MSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNADG--SDFYLLAQTMAKKFEEKFAKLVE 107
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7R9UFP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFP7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 5.260e-22 Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGA 315 M ++D L +S+ F EPV+WR +GL+DYP II PMDLGTV+ +L Y A E A D+RL+W NC TYN G + +K A+ SK+FE++F + ++ A Sbjct: 11 MMGVLDFLDKQTESYIFSEPVNWREMGLYDYPEIIKNPMDLGTVRQKLVNKEYRNATECAEDIRLVWRNCMTYNQDG--SEFYKIAEKFSKKFESKFAPVAKSEA 113
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S1FUF8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUF8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 7.620e-22 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 7 QIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 +++ SLL+ DS FREPVDWR + L DYP I+ + MDLGT+K +L++G Y + ADVRL+W NC YN G + A+ S RFE R+ KL Sbjct: 63 KLVSSLLSRNDSAPFREPVDWRAMELWDYPKIVRKMMDLGTIKRKLERGEYRTVQDVVADVRLVWKNCMLYNADG--SDFYLLAEGFSSRFEERWKKL 158 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1051.545.1 >prot_F-serratus_M_contig1051.545.1 ID=prot_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=polypeptide|length=142bp MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQback to top mRNA from alignment at F-serratus_M_contig1051:180369..181457+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1051.545.1 ID=mRNA_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=mRNA|length=1089bp|location=Sequence derived from alignment at F-serratus_M_contig1051:180369..181457+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1051:180369..181457+ >mRNA_F-serratus_M_contig1051.545.1 ID=mRNA_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=CDS|length=852bp|location=Sequence derived from alignment at F-serratus_M_contig1051:180369..181457+ (Fucus serratus male)back to top |