mRNA_F-serratus_M_contig1051.543.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1051.543.1 vs. uniprot
Match: A0A1X6NLC3_PORUM (Peptidylprolyl isomerase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLC3_PORUM) HSP 1 Score: 65.9 bits (159), Expect = 2.090e-9 Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 1 Query: 2017 DLGVRTMLHGERARISVSPSYAYGDKGCPPIIPPGATLVFEVNLLDF 2157 D GV M G+RA+++ SP YAYGD+G PP+IPPG+TL+F+V LL F Sbjct: 60 DEGVAQMSVGQRAKLTCSPDYAYGDRGFPPVIPPGSTLIFDVELLSF 106
BLAST of mRNA_F-serratus_M_contig1051.543.1 vs. uniprot
Match: A0A852BY35_9PICI (Peptidylprolyl isomerase (Fragment) n=2 Tax=Piciformes TaxID=9219 RepID=A0A852BY35_9PICI) HSP 1 Score: 68.9 bits (167), Expect = 3.090e-9 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 2011 GVDLGVRTMLHGERARISVSPSYAYGDKGCPPIIPPGATLVFEVNLLDF 2157 G+++G+ TM GE A+ PSYAYG +GCPP+IPP AT++FEV LLDF Sbjct: 36 GLEIGLLTMRKGETAKFIFKPSYAYGQQGCPPVIPPNATVLFEVELLDF 84
BLAST of mRNA_F-serratus_M_contig1051.543.1 vs. uniprot
Match: A0A8C2SY10_COTJA (Peptidylprolyl isomerase n=2 Tax=Phasianidae TaxID=9005 RepID=A0A8C2SY10_COTJA) HSP 1 Score: 70.1 bits (170), Expect = 3.620e-9 Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 2008 KGVDLGVRTMLHGERARISVSPSYAYGDKGCPPIIPPGATLVFEVNLLDF 2157 +G+++GV TM GE AR +PSYAYG +GCPP+IPP AT++FEV L+DF Sbjct: 93 QGLEIGVLTMKKGEVARFIFAPSYAYGQQGCPPLIPPNATVLFEVELIDF 142
BLAST of mRNA_F-serratus_M_contig1051.543.1 vs. uniprot
Match: A0A1U8CSY1_MESAU (Peptidylprolyl isomerase n=4 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A1U8CSY1_MESAU) HSP 1 Score: 65.1 bits (157), Expect = 3.890e-9 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 1 Query: 2011 GVDLGVRTMLHGERARISVSPSYAYGDKGCPPIIPPGATLVFEVNLLDF 2157 G++LG+ +M GE AR P+YAYG GCPP+IPP AT++FE+ L+DF Sbjct: 5 GMELGLLSMRRGELARFLFKPTYAYGTLGCPPLIPPNATVLFEIELIDF 53
BLAST of mRNA_F-serratus_M_contig1051.543.1 vs. uniprot
Match: A0A7K5ABQ1_9AVES (Peptidylprolyl isomerase (Fragment) n=2 Tax=Centropus TaxID=57401 RepID=A0A7K5ABQ1_9AVES) HSP 1 Score: 68.6 bits (166), Expect = 4.440e-9 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 2008 KGVDLGVRTMLHGERARISVSPSYAYGDKGCPPIIPPGATLVFEVNLLDF 2157 +G+++G+ TM GE AR +P YAYG +GCPP+IPP AT++FEV LLDF Sbjct: 39 QGLEMGLLTMKKGEVARFVFTPDYAYGQRGCPPLIPPSATVMFEVELLDF 88 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1051.543.1 >prot_F-serratus_M_contig1051.543.1 ID=prot_F-serratus_M_contig1051.543.1|Name=mRNA_F-serratus_M_contig1051.543.1|organism=Fucus serratus male|type=polypeptide|length=379bp MATSQNNSNRFGGSRSDDEGSTGSSADFDRSSIYKNASDELPQLAADDKLback to top mRNA from alignment at F-serratus_M_contig1051:131913..154738- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1051.543.1 ID=mRNA_F-serratus_M_contig1051.543.1|Name=mRNA_F-serratus_M_contig1051.543.1|organism=Fucus serratus male|type=mRNA|length=22826bp|location=Sequence derived from alignment at F-serratus_M_contig1051:131913..154738- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1051:131913..154738- >mRNA_F-serratus_M_contig1051.543.1 ID=mRNA_F-serratus_M_contig1051.543.1|Name=mRNA_F-serratus_M_contig1051.543.1|organism=Fucus serratus male|type=CDS|length=2274bp|location=Sequence derived from alignment at F-serratus_M_contig1051:131913..154738- (Fucus serratus male)back to top |