|
Homology
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A8B8E0U1_CRAVI (LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E0U1_CRAVI) HSP 1 Score: 263 bits (673), Expect = 8.690e-82 Identity = 135/282 (47.87%), Postives = 189/282 (67.02%), Query Frame = 1
Query: 55 FETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
FETL V+ P+ +V+ V +NRP K NAMN FW E RECF+++S D D RVV +SGAG F+AGLDL D S+ + D +R+AF R + QE+F+ IE+C +PVIAA+H ACVGG +D+ ACDIR+C+ +GLAADVGTLQR P+IVGN+SL REL +T R F + EA +MG VS++ ++ +++ +L TAA IA +SPVAV GTK +L++ RDHS+++GL++ W+ LQ+ED+ K++ A+L +K P FSKL
Sbjct: 16 FETLNVTXPKEFVVQVEMNRPKKLNAMNREFWRECRECFQKLSTDKDCRVVILSGAGKAFTAGLDLADMSDIAVLTNPELDTSRKAFLIRNTIRDYQETFTVIEKCSKPVIAAIHNACVGGGIDMTAACDIRYCTGDAWFQIKEVDIGLAADVGTLQRFPKIVGNDSLVRELCFTARKFFSDEAKQMGFVSRIF---QDKRAMIEGALETAALIAAKSPVAVQGTKISLVFSRDHSVQEGLDHVGLWNQGMLQSEDVMKSVMAALEKKQ-------PTFSKL 287
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A8C8RVU7_9SAUR (Enoyl-CoA hydratase 1 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8RVU7_9SAUR) HSP 1 Score: 264 bits (674), Expect = 1.550e-81 Identity = 145/287 (50.52%), Postives = 190/287 (66.20%), Query Frame = 1
Query: 43 AYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLD-LEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
A +ETL VS+ VLHV +NRP KRNAMNA FW E ECF +I++D++ V VSG G F+AG+D LE F T+ E DVAR+A+ R + + QESFS +E+CP+P+IAA+HG C+GG VDL ACDIR+C+ +GLAADVGTLQR+PRI+GN+SL ELA+T R A EA GLVS+V +Q +++ S AA+IA +SPVAV GTK N++Y RDHS+ +GL+Y ATW+ + LQ EDL K+ A + +KS P FSKL
Sbjct: 39 ASHSYETLKVSQVREKVLHVELNRPDKRNAMNAAFWREMVECFNKIAQDSECHAVVVSGTGKLFTAGIDFLEIGQVFLTV--EGDDVARKAWNLRKMIREYQESFSVLEKCPKPIIAAVHGGCIGGGVDLISACDIRYCTQDAWFQVKEVDIGLAADVGTLQRLPRIIGNQSLVNELAFTARKMMAPEAESSGLVSRVF---QDKQAMLEGSFELAADIASKSPVAVQGTKINILYSRDHSVSEGLQYMATWNMSMLQTEDLVKSAQAVMEKKS----PKDVVFSKL 316
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.310e-81 Identity = 142/282 (50.35%), Postives = 184/282 (65.25%), Query Frame = 1
Query: 40 TAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLED----TSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKA 873
++Y FETL V VLHV +NRP + NAMNA++W E R F I+ D +VR V +SGAG HFSAG+D++ T N + + DVAR A + + L +MQESF+ I RCPQPVIAA+HGAC+GGAVDL ACD+RFCS VGL ADVGTLQR+PR+VGN+S R++ Y+ RTFGAAEA GLVS+V G R+ ++ A++ AA IA SP+AV GTKR+L + +DHS+ DGL + A W+ AAL +DL RRK + A
Sbjct: 3 SSYVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGKNSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGACMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQRLPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVCSGG--REGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDLMIGARPPDRRKGGAAA 282
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: V4BYT3_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BYT3_LOTGI) HSP 1 Score: 263 bits (671), Expect = 2.990e-81 Identity = 139/287 (48.43%), Postives = 190/287 (66.20%), Query Frame = 1
Query: 40 TAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
T+ +FETL V++P +VL V INRP KRNAMN FW E ECF +IS D+D R V +G+G F+AGLDL D N + DV R+A + R L ++ QESF++IE+CP+PVIA +H ACVGG +DL ACD+R+ S +GLAADVGTLQR+P+I+GN+S+ RELAYT R F A EA ++GL+ ++ ++ ++Q +L TA+ IA +SP+AV GTK L+Y RDH + +GL+ TW+ LQ+EDL KAM A + +K+ P FSKL
Sbjct: 30 TSTYNFETLKVTQPREFVLQVEINRPEKRNAMNQAFWREMVECFNQISDDSDCRAVIFTGSGKIFTAGLDLMDMDN--AFMQSDLDVGRKAMKLRKLIRSYQESFTAIEKCPKPVIACVHSACVGGGIDLIAACDMRYSSSDAWFCVKEVDIGLAADVGTLQRLPKIIGNDSIARELAYTARKFFADEAKQIGLIGRIF---ENKETMIQGALDTASLIASKSPIAVQGTKVCLVYARDHGVSEGLDQMVTWNQNMLQSEDLMKAMVAGMDKKA-------PVFSKL 304
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A164L7M7_9CRUS (Delta-Delta-dienoyl-CoA isomerase n=4 Tax=Daphnia magna TaxID=35525 RepID=A0A164L7M7_9CRUS) HSP 1 Score: 263 bits (671), Expect = 3.290e-81 Identity = 144/282 (51.06%), Postives = 184/282 (65.25%), Query Frame = 1
Query: 55 FETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
FETLLVS P +V HV +NRP + N MN+ FW E ECF+ IS D+D RVV +S G HF+AGLDL D DVAR+ + K+ Q SF+S+E+C +PVIAA+HG C+GG VDL A DIRFC+ +GLAADVGTLQR+P+++G++SL RELAYT R A EAA+ GLVS+VL S ++ +++ +L A+ IA +SPVAV G+K NL Y RDHSIE+GL Y W+ A LQ+EDLR A AS+ RK P FSKL
Sbjct: 34 FETLLVSTPREYVYHVELNRPQQFNTMNSAFWREMVECFQAISEDSDCRVVVLSANGKHFTAGLDLTDMGPLMETVLGNGDVARKFRTLQQFIKSYQLSFTSVEQCNKPVIAAVHGGCIGGGVDLITAADIRFCTQDAFFQIKEVDIGLAADVGTLQRLPKVIGSDSLVRELAYTARKMFADEAAQAGLVSRVL---SDKEIMLKVALEIASAIADKSPVAVQGSKHNLNYARDHSIEEGLNYMVIWNAAMLQSEDLRVAAMASMDRKGPP-----PSFSKL 307
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: L8YC16_TUPCH (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Tupaia chinensis TaxID=246437 RepID=L8YC16_TUPCH) HSP 1 Score: 263 bits (673), Expect = 6.130e-81 Identity = 140/283 (49.47%), Postives = 190/283 (67.14%), Query Frame = 1
Query: 52 DFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
++E+LLV+ + VLHV +NRP KRNAMN FW E ECF +I++D+D RVV +SGAG F+AG+DL D ++ D + DVAR ++ R L QE+F+ IE+CP+PVIAA+HG C+GG VDL ACDIR+C+ VGLAADVGTLQR+PRI+GN+SL ELA+T R A EA GLVS+V ++ ++ A+ AAEI+ +SPVAV GTK NL+Y RDHS+ +GL+Y +TW+ + LQ ED+ K++ A + +K FSKL
Sbjct: 75 NYESLLVTSAQKHVLHVQLNRPDKRNAMNKAFWSEMVECFNKIAQDSDCRVVVISGAGKMFTAGIDLVDMAS-DLLQPHGDDVARISWYLRNLITRYQETFNVIEKCPKPVIAAIHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRIIGNQSLVNELAFTCRKMMADEALGSGLVSRVF---PNKEAMLDAAFALAAEISSKSPVAVQGTKVNLVYARDHSVAEGLKYMSTWNMSMLQTEDVVKSVQALMEKKDLKDV----AFSKL 349
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A6P4Y9I2_BRABE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y9I2_BRABE) HSP 1 Score: 262 bits (669), Expect = 6.350e-81 Identity = 138/288 (47.92%), Postives = 194/288 (67.36%), Query Frame = 1
Query: 37 MTAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
M+ Y FE+L V+RP V+ V +NRP KRNAMN FW E ECF+ I+ + D+R V VSGAG F+AGLDL DT + ++ E D+AR+A R + QE+FS IE+CP+PVIAA+H ACVGG VDL ACDIR C+ +GLAADVGTLQR+P+++GN+SL RELA+T R F A EA +MGLVS++ R+ +++ +L A+ IA +SP+AV GTK +++Y RDH +++GL++ A W+ LQ+ED+ +A+ A ++++ P FSKL
Sbjct: 32 MSGYQ-FESLAVTRPREHVMQVEMNRPEKRNAMNQAFWREMVECFQAIAAEPDIRAVVVSGAGKIFTAGLDLGDTMS--SLFVEGADIARKAIRLGPKIRQYQETFSVIEKCPKPVIAAVHSACVGGGVDLITACDIRLCTQDAWFQIKEVDIGLAADVGTLQRLPKVIGNDSLARELAFTSRRFEAEEAKQMGLVSRIY---PDREALLEGALELASTIASKSPIAVQGTKVSMVYSRDHPVQEGLDHVALWNSTMLQSEDVVEAVQAGMQKRK-------PEFSKL 306
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A401SM05_CHIPU (Uncharacterized protein n=2 Tax=Chiloscyllium TaxID=34767 RepID=A0A401SM05_CHIPU) HSP 1 Score: 262 bits (669), Expect = 6.980e-81 Identity = 144/296 (48.65%), Postives = 187/296 (63.18%), Query Frame = 1
Query: 13 VGCIEVDAMTAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
+G + A A DFETL VS+P VLHV +NRP KRNAMN W E ECF +I+ D D RVV VSGAG F+AG+DL D + + D AR+A+ R QESF+ IE+CP+PVIAA+H AC+GG VDL ACDIR CS +G+AADVGTLQR+P+I+G+ SL EL YT R A EA GLVS+V ++ +++ + A+EIA +SP+AV GTK NLIY RDH ++DGL Y ATW+ + LQ +DL K+ A++ +KS P +SKL
Sbjct: 22 IGIRTMSAAVASYDFETLHVSQPRDSVLHVELNRPNKRNAMNHTLWREMVECFNKITHDTDHRVVVVSGAGKMFTAGIDLMDMAG-QVLQPTGDDTARKAWHIRNKILQYQESFNVIEKCPKPVIAAVHNACIGGGVDLITACDIRLCSQDAWFQVKEVDIGMAADVGTLQRLPKIIGSASLMSELVYTARQLMADEALSCGLVSRVF---EDKEAMLEGAFEMASEIASKSPLAVQGTKLNLIYSRDHPVKDGLNYIATWNMSMLQTDDLIKSAQAAMEKKSPKDVP----YSKL 309
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A1S3K0E9_LINUN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E9_LINUN) HSP 1 Score: 261 bits (668), Expect = 9.850e-81 Identity = 136/282 (48.23%), Postives = 190/282 (67.38%), Query Frame = 1
Query: 55 FETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
FETL V++P +VL V +NRP KRNAMNA FW E ECF ++S D D R V VSGAG F+AG+DL++ ++ + DV R++ + + Q++F+ +E+CP+PVI A+H ACVGG +DL ACDIR+CS VGLAADVGTLQR+P++VGN+SL RELAYT R A EA R GLVS++L R+ ++A++ TAA IA +SP+AV G+K +++Y RDHS+++GLE+ A W+ A LQ+ED+ A A++ +K + FSKL
Sbjct: 41 FETLKVTKPREYVLQVELNRPEKRNAMNAAFWREMVECFNKVSTDPDCRSVVVSGAGKLFTAGIDLQEIASLMPME---SDVGRKSMKLKGAIARYQDTFTCMEKCPKPVIVAVHNACVGGGIDLITACDIRYCSQDAWFQVKEVDVGLAADVGTLQRLPKVVGNDSLARELAYTARKMMADEAMRCGLVSRIL---PDRESTIEAAIETAALIASKSPIAVQGSKVSIVYSRDHSVQEGLEHIACWNSAMLQSEDVMTAAMAAVEKKPAE-------FSKL 309
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A667X6C2_9TELE (Enoyl-CoA hydratase 1 n=3 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667X6C2_9TELE) HSP 1 Score: 262 bits (669), Expect = 1.020e-80 Identity = 146/303 (48.18%), Postives = 193/303 (63.70%), Query Frame = 1
Query: 1 GAHVVGCIEVDAMTAYDD---FETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 900
G +GC V AM++ F TL +S P+ + HV ++RP KRNAMN FW E +CF +IS D D RVV VSGAG F+AG+DL D ++ D + E D AR ++ R + QE+F+ IERCP+PV+ A+HGACVGG VDL ACDIR C+ +GLAADVGTLQR+P+++G+ SL ELA T R A EA GLVS+V + ++ ++ +L A EIA +SPVAV GTK NLIY RDHS+ +GL+Y ATW+ A LQ +D+ K+ AS+ +KS P FSKL
Sbjct: 27 GLWHLGCSAVRAMSSSGPTPPFTTLSISHPKESITHVELHRPEKRNAMNKAFWSEMVDCFNQISGDPDCRVVVVSGAGKIFTAGIDLMDMAS-DVLQPEGDDTARISWNMRKIITKYQETFTVIERCPKPVLVAVHGACVGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARRMYADEAKSSGLVSRVF---ADKEAMMAGALEMAGEIAGRSPVAVQGTKVNLIYSRDHSVAEGLDYMATWNMAMLQTQDVMKSAQASMEKKS----PKTVAFSKL 321
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match Name | E-value | Identity | Description | |
A0A8B8E0U1_CRAVI | 8.690e-82 | 47.87 | LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl... | [more] |
A0A8C8RVU7_9SAUR | 1.550e-81 | 50.52 | Enoyl-CoA hydratase 1 n=1 Tax=Pelusios castaneus T... | [more] |
A0A835YKC1_9STRA | 2.310e-81 | 50.35 | Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tri... | [more] |
V4BYT3_LOTGI | 2.990e-81 | 48.43 | Uncharacterized protein n=1 Tax=Lottia gigantea Ta... | [more] |
A0A164L7M7_9CRUS | 3.290e-81 | 51.06 | Delta-Delta-dienoyl-CoA isomerase n=4 Tax=Daphnia ... | [more] |
L8YC16_TUPCH | 6.130e-81 | 49.47 | Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... | [more] |
A0A6P4Y9I2_BRABE | 6.350e-81 | 47.92 | delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... | [more] |
A0A401SM05_CHIPU | 6.980e-81 | 48.65 | Uncharacterized protein n=2 Tax=Chiloscyllium TaxI... | [more] |
A0A1S3K0E9_LINUN | 9.850e-81 | 48.23 | delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... | [more] |
A0A667X6C2_9TELE | 1.020e-80 | 48.18 | Enoyl-CoA hydratase 1 n=3 Tax=Myripristis murdjan ... | [more] |
Pagesback to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 391.7 |
Seed ortholog evalue | 2.9e-106 |
Seed eggNOG ortholog | 2880.D8LBQ0 |
Preferred name | ECH1 |
KEGG ko | ko:K12663 |
KEGG Pathway | ko04146,map04146 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575 |
EggNOG free text desc. | delta3,5-delta2,4-dienoyl-CoA isomerase activity |
EggNOG OGs | KOG1681@1,KOG1681@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000 |
Exons | 4 |
Model size | 1404 |
Cds size | 867 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928882.9162915-UTR-F-serratus_M_contig1051:50291..50327 | 1622928882.9162915-UTR-F-serratus_M_contig1051:50291..50327 | Fucus serratus male | UTR | F-serratus_M_contig1051 50292..50327 + |
1690962614.1868534-UTR-F-serratus_M_contig1051:50291..50327 | 1690962614.1868534-UTR-F-serratus_M_contig1051:50291..50327 | Fucus serratus male | UTR | F-serratus_M_contig1051 50292..50327 + |
1622928882.998058-UTR-F-serratus_M_contig1051:61775..62276 | 1622928882.998058-UTR-F-serratus_M_contig1051:61775..62276 | Fucus serratus male | UTR | F-serratus_M_contig1051 61776..62276 + |
1690962614.234876-UTR-F-serratus_M_contig1051:61775..62276 | 1690962614.234876-UTR-F-serratus_M_contig1051:61775..62276 | Fucus serratus male | UTR | F-serratus_M_contig1051 61776..62276 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928882.9394832-CDS-F-serratus_M_contig1051:50327..50514 | 1622928882.9394832-CDS-F-serratus_M_contig1051:50327..50514 | Fucus serratus male | CDS | F-serratus_M_contig1051 50328..50514 + |
1690962614.1980069-CDS-F-serratus_M_contig1051:50327..50514 | 1690962614.1980069-CDS-F-serratus_M_contig1051:50327..50514 | Fucus serratus male | CDS | F-serratus_M_contig1051 50328..50514 + |
1622928882.9588044-CDS-F-serratus_M_contig1051:58792..58914 | 1622928882.9588044-CDS-F-serratus_M_contig1051:58792..58914 | Fucus serratus male | CDS | F-serratus_M_contig1051 58793..58914 + |
1690962614.206105-CDS-F-serratus_M_contig1051:58792..58914 | 1690962614.206105-CDS-F-serratus_M_contig1051:58792..58914 | Fucus serratus male | CDS | F-serratus_M_contig1051 58793..58914 + |
1622928882.9700704-CDS-F-serratus_M_contig1051:60774..60966 | 1622928882.9700704-CDS-F-serratus_M_contig1051:60774..60966 | Fucus serratus male | CDS | F-serratus_M_contig1051 60775..60966 + |
1690962614.2153065-CDS-F-serratus_M_contig1051:60774..60966 | 1690962614.2153065-CDS-F-serratus_M_contig1051:60774..60966 | Fucus serratus male | CDS | F-serratus_M_contig1051 60775..60966 + |
1622928882.9822826-CDS-F-serratus_M_contig1051:61409..61775 | 1622928882.9822826-CDS-F-serratus_M_contig1051:61409..61775 | Fucus serratus male | CDS | F-serratus_M_contig1051 61410..61775 + |
1690962614.2252238-CDS-F-serratus_M_contig1051:61409..61775 | 1690962614.2252238-CDS-F-serratus_M_contig1051:61409..61775 | Fucus serratus male | CDS | F-serratus_M_contig1051 61410..61775 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1051.540.1 >prot_F-serratus_M_contig1051.540.1 ID=prot_F-serratus_M_contig1051.540.1|Name=mRNA_F-serratus_M_contig1051.540.1|organism=Fucus serratus male|type=polypeptide|length=289bp
MTAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISR DADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAK TMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSQDVKFCIAE VKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVL GPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYA ATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL* back to topmRNA from alignment at F-serratus_M_contig1051:50292..62276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1051.540.1 ID=mRNA_F-serratus_M_contig1051.540.1|Name=mRNA_F-serratus_M_contig1051.540.1|organism=Fucus serratus male|type=mRNA|length=11985bp|location=Sequence derived from alignment at F-serratus_M_contig1051:50292..62276+ (Fucus serratus male) GGCGCGCACGTCGTTGGGTGTATCGAAGTCGATGCAATGACGGCTTACGA
TGATTTTGAAACCCTCTTGGTCTCAAGACCAGAATCATGGGTGCTACATG
TGATGATTAATCGTCCGGCCAAGAGGAACGCGATGAACGCCCGTTTTTGG
ATTGAGTTTCGCGAATGCTTTGAACGCATTTCCAGAGATGCAGATGTGCG
GGTCGTCACCGTCTCTGGTGCAGGTGAGGAATGGTGCAGGCATTACGCGA
TTGGATTTTAAAAGTGAGCGAGCTTGACTTCTTACGCTCAGGCAATTTTT
TATTGACTCCCAGGTAGTTCCTCTGTACATGTGTTGCGATCAACTCGCCG
ATTTCAACCAAATTGCAAATTTCAGAAGTACACGATGTAAAAAACTGCGG
AATTTGTAATAATTCCATATGCCCCGGAATATGCTTATAAATGTACCGAA
CTCCGATTCTGGAAATCGGATTCGTACCCGTGGTTAAGTTAAATGGGGCA
TGTCTGTCTGTCTGTAAGTATAGTCACACATATAGCAAGAGTATGGATCA
ACCGAGTAAGATTGCCAATCCTGTTTGTGGTCAGCTCAACAGGGAAAATA
ATATTCCCCTGTCCGCGCTCGTGCCTGAGAATTTGGTCTCGCGAGACGGT
TTCGGCAGTCCCATCCCGCGTCAGCCTGCTCATCTCCATATACTCAGGCC
GAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGAGGGTGTCC
ATATATTTATCCTATTTTTATGTATATACGTTTTGTCAGCACGTTCGTTC
AGAGAGTACGGATCAACCCTGATGATAAATCCGGAGCTTCACAGGACTTG
CACGGGCGCGTATTTCGTGTTGGGATTGAGGTGGGGGCTGGAGATGCAGG
GGTCGACGTAAGTTTCATCATATTAATAATAAGAGCTCAATACAAAGGGT
TACACTGAGGAGAATCCCCTGCTCAAGTAACATATACTGAAGTATATATC
GATGCCAACGCTTCCGCATATGGCGTTGACTCCCGGGAATCCGCCGACGC
TGGGCCAGTATTAATAGTTCTCGAGGAAGTTCCAGTAACGGGCGCTGCCT
TTTCAGATTTCACCATGAACCAATTAATGTGCAATTGTGATAAAGTAACT
ATCACACCACAGGGTAAAAGTCAATTGACGATTACAACTCGGTAATCAGT
CCTTATAACACTCTCCACCCACATAATTTGACTATTATAGCCGATGATCA
AGCGGACTAGATAATTCGATAAGGTTTTGAGTGTAGGGGCATACGTACGG
AGTACCACCGTTATTTCATCTCCAACCGATATTCTGCCCAGGAGTTCGTT
GAGGTAAAGAAGCTATTAGCTCAGCGGGATTCGAACTCGGGTCCTACCGT
CGACGCAAGATTGATAAGGTAACTAATACACCACAGGGTAACAGTCAATT
GACGAATACAACTCGGTAATCAGTCATTATAACATAATACAGAAAGTATC
GGAGGCGGATATACTTTCAACATTCTATTCCAGATTCAGCCTGGGTATGG
GGATGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCGCGAGAC
CAAACTCTCAGGCGCGCACGGGGACAGGGGAATATTATTTTCCCTGTTCA
GCTGACCACGAGCAGGATTGGCAACCTTACCGGTTGATCCATTCTCTGCT
ATATGTGATGACCATACATACATACATACATAATATAACCGTTTCATACC
AACAGTGAGCATGGAAAGAGAGGCGCATATTAATTGATCCATGGTGACCT
GCCAAGGCAGCACTCGTTCGGAACTATCTTGAGGTTTACTGGCCCTGTGT
CGGCGGACTCTCGGCAGTGAACGCCATCAGTACGCGATTGCGTAATCCGA
TAAACTCGGGACTGACCCGGTGGCGTGTGGCGGTTTTAACTAAACAAATG
GACGCCGCCGCGGAACTCGGGAGGAATCCCGTAGGTAAGCACCAGATTCA
GCCTGAGTATGGAGATGAGCAGGCTGGTGCGGGACGGGGCTGCCGAACCC
GTCTCGCGAGCCAAAATTCTCAAGCGCAAACGCGGACAGGGAAATATTTA
TTTTCCCTGTTCAGCTGACGACGTGCAGGATTGGTAACCTTACCCGGTTG
ATCCATGATCTTGCTATATGTGTGACCATACATAAATTCAACAATGAAAA
AGTGACCCGAGATCACTTTATGGTTTCTTTGTTGTACCAATTGCTAACCC
TAATCACTTACAATGGCGTTGGTAATGTTTCGACTCCCTCACCGCGAACG
TCTTTAAAGAAAAATCCGAACACACCTAGACCTTCTGATCCGCCCCCGGT
AGGGGGAAAAACACAAAACGCTTAGGTGGGATCAAAGGCTGCAAATACAA
AACCTCTTCATGGCATTTAAACGGGTTCCCCAATGCAGATAACATTGGGT
CAACAGTAAAATGTCGGGGAGAAATCCACCGTTATACTGTACTCTTACAT
TAATCGCCATGTAGGGACACCAGAAAAACAGCAAAGACAAAAGAGTACAC
CATCAAACAGTAAAGACGAATCCAATACTCCGTACAACATTAAAACGGGA
ACAGAGAACCATGACCATGGTGATGCGGAATCTTCATATCCAAGTACACG
ACAGCATTCACCTAGAAGTAGATGAAGAGCAGTAAGAGATCACACAAGGA
GGTAAGAGGCAAGCGGAAAGAACTGGGTTCCTTGCTCCAATTCGTCAGGG
CTACGACTCACAGATGCTCCTCATGCCTGGACTTAGCTATGGCCCCGCGT
TGACCAGAAACACAAAGGAAAGAGCATCTGTTTGTAAAAAATGATCAAGT
GGGCCTCAAACCAACTGGTGTGACCCCCCATACGATGACGCAGAACTTCT
TCAGCTCCATGTCTTTTATTCCGAACTGACGTGCTTCCCATCCAAGGTTC
ATTATCTTCAACAGCACGTCATTGTTCCGATCTGTCGTCAGCACCAGCTA
GCTCTATCATTTGTTCCTCGGATCTTCTCGATGCAGAGCGGGACTAACTG
TATTATTGTGCTTTGGTTATAGTAAAATAAAATCTAGTTACAAGCTGGGC
TGGCCAAGAAACTGACTTCTGTTCGTTCATGTCTCGCTCTGCCGTTTCTA
CGAGTTAAAGCTTGAAATTTGGAGGCTGCTCCTATACGGCAAAAAGGGAA
GCGCAGGCGCCGGAATTTTTCGAATCCGAGTTGATTTTGGTAAACAATGA
CCAAATGGCAGCGTAGTGGAGGATACTTCCTATACTAAAATCAGTATGAA
AAAAAGTGTCACGGATCAAGCTGAAATTTGTACACGTACCCAGGAGCACC
GCAAGAGCGTGGGTGGTAGTTACAAGGCTCGCCTCGTTTTCTATCAAGAG
TTGCGGCCTCGTAAAGATTCCGATACAAAACACAAGTGAACTGAGGAAAT
GTGGGGGTATCGCGATTTGCCACGCGGGTTTTACGATTTTTCACCTGAAC
TTTCGACGCGTGATTTAGACCGCTCTTGCGGAGAGGACCACCCCTGCACA
TTTTTATTTATTTTTATTTTTCCCATAATTTCGTCGCGAAACAAATATTC
CCACATGTACTTATATCCGGCTATCATACCATAACTTACGAAAAGAAACT
AAAACCAAAATGTGCAGGGGTGGTCCTCTCCGCAAGAGCGGTCTAAATCA
CGTGTCAAAATTTCTGGTGAAAAATCGTAAAAACCGCGTGGCAAATCCCA
TTCCGCCATGTGTACAGCGTCTTGGCCAGCCCAGCCTGTAGCTAGTCGGA
AAAAAATATTTTCTCAGCCACCTGACGATATTTTTTAACGATCTAGCGAG
TTTTTTTTACAGGAAAAATAAATAAATAAAGAACACAATCACTATCCGCA
GAGAGGCTGAGAGGGCCATAAACCACACTCTACCAGTATGCCACCCCTTA
ACCGAAGTCATGGGCGTCCAGCACTGCAGATCTTACCAAGCATTGCTCTT
GGGCGCGCGTAGGTCGCTTCTTCGAGAAGTTGAAGGAAGTGGAAATTGGG
GTATGTATGTATGTATGTATGTATGTATGTATGGACACATATAGCAGAGT
ATATGGATCAACCGGGTAAGGTAGCCAATCCTGCTCGTAGTCAGCTGAAC
AGGGAACATGAATATTCCCCTGTCCCCGTGCATGCCTGAGAATTTGGCCT
CGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGTTCATCTCCAT
ACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCG
GCGGCGTCCATTTATGAAACCGTCATACGCCATCGGGTCAGTCTCGAGTT
TATCGGGTCACGCAATTGCGCACCGATGGCGTTCACTGCCGAGAGTCCGC
CGGCACAGGGTCAGTAAACCTCAAGGTAGTTCCGAACGGGCGCTGCCTTG
GCAGGTCACCATGGATCAATTTATATTCGCCTCTCTATGTATGCATGTAT
GCATGGACATCGCAGATACAGTAGCAGAGTATAGATCGACGGGGCAATGT
TGCAAACGTCGGACAGATCGCAATCTGCGGGACCTAGGTCCTACAGATCC
CTGTGTAGGAAACATGCGCGAGGGACCCAGGTCCTACAGGTCACTAAATA
GCTAGAAAACATGTGCAAGGGGCCTAGGTCCTACAGGTTACTAGCTGGGA
AACTAGTTAGCGCTGCACAGATCACGAGTTGGAAACATGTACAGGTCAAT
GTCGCTCCACAGCTCACGAGTTGGAAACATGGGCGAGGGATCTAGGTCCT
ACAGTTCACTAGGTGGGAATCATATGCGAGGGACCTAGGTCTTACATATC
ACTATTGATAGCTGGGAAACATGTGACAGGTTAAAGGTGCTGCACATATC
ACGATCTGGAAACGTGTATAGGCCAATTGCGCTGCACAGATCGCGAGTTG
GTAATATGTACAAGCCGATGGACCTGCACAGATCACGAGTTGGAAACATG
TACAGGTCAATGGCGCTGCACAGATCACGAGTAGTTGGAAACATGCGCGA
GGAACCTAGGTCCTACAGGTCATTAGCTAAGAAACATGCGTGAGGGACCT
AGATCTTACAGACTACTAGCTGGGAAACATGTGCGAGGGCCTAGGTCTTA
CAGATCGCGTGTCGGAAACGTGTATAGGTCCATGGTGCTGTACATATCAG
CAGAGAAAAACGTGTACCGGTACAACTGCAACTCCCCCCTATAGATCATC
ATATCCGAAACGAGCGGATGCACCGGACTGCACAGGCCGCCCCTACACAT
GCGTGCATAATATTATCAAACTCAACTGTATAGATCATACAGGGTGTAGT
GCTCAATCGCCACGGTCTGGACGTCTTTGTCTCAGATAAAATAGATCCCA
TCACCAACATACATCAACATGCCCGCTTCATCGTGGGTGTGGGAAAGAGA
GGCGCATACTATGAAAATAATTGGTCTATAATGACCTGCAAAGGCAGCAA
CTGTTTGAAATTACCTCGAAGTTTACTAGCCCTGTGCCGGCGGGCTCTCG
GCAGTGAACGTCATCGGTACGCAAATGCGTGACCCGAGACCCGATGACGT
ATGACGGTTTAAAATACATAAATGGACGGAGGACCCCTGGTTTGAAGGGC
CTGAGGACGACGCTCCCAAGGTTGAACGAATACGGCGCGTGTATCCTCGA
GCCGACTACACGCAGGCACCATGGACGGTCATGCTTAGGCATCCAAGCTT
AAACACCCACTCTTCAAAGGAGGCGAAGGCTTTTCGCCGCCGATTCCGCA
TTCCATATGTTTTTTTCGTGGAGCTCCTCTCATTGATGACACAGCAGAAA
TGGTTCCCAAGCGGAGACATGGACGTCTGCGGCTAGCAACTTGAACTTCG
AATGTCCCCCGCATAGGCAAGCTTGTTCTAGTTTGTCGAAAACATAGCAA
GCCAAACCCGTATGCATAAGATGGCCTTCGCTCATGTTTTTGATCCCGAA
AAATAAAAACGGATTTGGTCCATTTTCGTATAAGTTTTTTCGTATGCATA
AGAGTCGGCCTTAACACGAGTAGTATGTAATGTTGCGGAGGCGGACACAA
CCGAACGTATTTCGCATCCTAGCCTTTCCTAAAATCACACTTAATTTCCG
CAGCCCCAGAGGATCCTCCATCCTGCAGAAACATTCCCGATTGCCTCTGA
GACAGTAGAATACGGCCTATAAATAGTATCGCAGTGCCTTCCCCAGCACT
TCTGACGTGGTCGTGAACGAGGACAAGCAGAACAACAGAACAAGAGCCTG
CCGTTTATCGCCGCGTCGTGTGGTCTATATTTAGAGCTGCTACTTTCAAG
GACGTGGTTTCAACCATTAGAGCTAGATAGATGAGGTGGGGGAGTGCTAA
ATTCTCTAGCTATTGAAAAGCGTAGGCGTGAACCTCGGGGGGGCGGGTTG
AGCAGCCCTTAGGACCAAAGGCGGGATGGGTTCAGAGTAGTAGTAAATGA
TGTTGGCAACCTAGCTCTTGGACTAGCCTCATAAACAAGAAGTGAGGAAA
AAAATACAAGATGAAGCACCTGTACTCTTGTGTTCGTTAGTGAACCCCCG
CTCCTCCCACTATATTAACAATACTATACTAATAATACTGCTCCACCCCC
TCCCCCAAAACCATCGCTACCCCTACCATTGCCGTCCTCTTCCCCTCCAC
CTCATCCCTCCTCATTGCTCGACGCCCTACTCGGGTTATCTTGGTTTTTC
AAATGTCCCCCCGAGAGCGCCAAAACTCTCTGCCGCGTTTTGGGCGTACA
ATAATATATGTCGCCCCTCGGTGTCGGTAAGAACGCCCCGGAGCGGCGTT
GAGCGACCGTCGCTCCCAAGGGTGTTCTTTTAGTCTTACTTTTATGAATC
CAACTGCTGTTCTCGGGTTTGGGGAATCTCCTTCAATAAGTGCTTCACGT
AGCGCACTCCCCGCCGTGTTAATAAAACTCATACAGGTAGGTACTCCTTT
GTAACGTAAATGGTACTTATTTCTTATTTTCCTTCATTCCACTTCGACCA
GCACCGAAAGACCACAAGCCCCCTACGGTTTGAAAGTTAGCACCTGATGC
TGAGAAGGTCGAAAAATCTGCGTCACTGCTAGAGAAGAAATGCTCAGGCG
CGTGTGAAGGGCAAAATCCCCCGCTTTACGTAAACTAAAAGACTGAGGTC
AGAAGTAGAGCAAGCCGGCTGTAGCGGCGGGTTTTAGCAACCGGGGGCGA
AGGCCACAAGCGATCCCACGGTCTTCCGCAGACTTAGGCACAAGCGCGCC
AGCGGCCTGCACGCCACGTTGGCCGGAGTATCTGTCTGAATGGATCACCT
CAGGGCAAAGTTAAGGCTGATTGGCTGAACGGATTGAAGCCACGTAAGAG
AGTGTCCGCACTTTCACGAACGATCTTAATCCCTCTGAAACATGGGTCTC
AAGTTCGGGAGCCCGACCAATCCCGACCGGTTTCGGAAGAAGAAAAAACG
AGGTTGACCACAAAGAGGCCGCAGCCTAGCCTATATCAAAGGCGTTTTAT
GTTTTATTGCTCCTTTCTGGAAGCCTAAAAATGACCGGTTTCCAGTCTTT
GCAATACAGGTCCACTTAATACAGTACTCTTCGGAGGCGCTGCGCTTGTT
CCAAATTCGGGAAACCAACCGGTGTACTGTACATGCAAAGTACAAATAGG
AAAATGAATTCCAAAAGCCGGAGCTTCCAAATTATCACGGAAACATTTTC
TTGCGGCGATGCTTGGCGGAAGCATCAACTCTGCTTGAAGCTTCAAGCTA
CACCGCGACCTGAACATTTCTAACATAACTCTGGCGGTGTGGCAACCCCT
TTCCCTCTGTTCCAATGGTAGCTGAAACTATCGATGCTTGGCCCACAGAC
TTATTAGCTTATGACCACCTGCCAGGTGAGCAAGCGCAAAAGACCTCCCA
GTGAACTATTTTTTTTGTTGGTTTCTCTCCCACCAAGCTCTATCCATCTC
GTTTCTGCCGCACCCCCCTCGCCTGGCTCGGTCTCGATCGGTCCAACCGT
TTGAGCTATAGTACATATCTCGCTTAAAGCTCCCAATAAAAAAAAACAGA
ACAGAACTAAACACACTATTACTACAGAATATTTGTGAAAAAAAAAAATG
GCAACAAAATTCCCCGCTCCTGCATTTATCTTGGATTGTCCTCTTAGCCC
CTCTCGCACTTTCACCCGAGGACCCTAACTTACAGGATATGGATGATGAA
TGTCCAGTGCCCTAGTAGACTCCCATGGCTGTCTCAGCCTCTAAGCAGGT
TTTACGGTACGCGTGTTGAACCGCGTGACAACGCGAACGCTCGTCACAGC
ATCAGAGGTGGTGGAAGTAAGCCTTTTGACTTCTTACAGTAAGATGATTG
CGAGTGAGATCCATCCCTCACGCGCGTTTCGAAGACGTGTCAGCCCCGCC
CTTTTAACAACAAGTTACCTTTTCCCTCTCTCCGTCATCCCATCTTGCCA
GGCGATCACTTCTCTGCGGGCCTTGACCTTGAAGACACCTCGAATTTCGA
TACCATCGCGAGGGAAACCAAGGACGTGGCAAGGCGTGCGTTTCGGTTCC
GCACGCTGGCGAAGACCATGCAGGTGTGCAAAATATTTAGATCAGAACAG
ATGATTCACGGCCTTCGCAAGCAGTATTCAACGTCTAGCACTTTGGGATC
ATAGACATCCTGTACTGTAGTCAGTGATTGTTGTTTCCGTTGCCGTTCGA
CCATTTCTCATTTGTGTTGGAAATCGTTTTTATTTTATTTTATTTTTTTG
CGGGGAATCTCTGCTAATTCTGACCAACATTCGCGGGTGAAAATCCGCTA
AGCTGTAACGTTATGGTCGTATTATTATTTACCAGGCATTTATTCTTGCT
TTGTGAGGCCTTGTTCTGTCTCTACCGGCATCCCTTGGTGGGGTGGTGCT
AGTCTAATGAACCACTGTATTAATAGTACAACATTGATCGTACAACATTA
ACAGTACGAGTCAGTTCTTTGGTACATAGCTCTAGCTAGTTCTACCGCCG
GTTGCTGCTATGATATTATGCAGCCCTACAGCAGCCATACTGTCCAGAAT
ATAACAGTGACTGCTTGGTTCGGCTGTACTGTATCTCGAGAGTGCGGTGG
GATGCCTAAACAACGTTTTCACCTACCGGTAATCAGGAGTTTTGGACCCC
ACCATGACCACACCACACTTTTTCAGCGCCGTAGAAAATCATTGCCCCCT
AGCTACATTTGTATACCCTGACCCACCGCTTTTTGATAAGCTCCACGAGG
TCCACGAAGTACGCGAAGATACAGGATACGAAAGCAAGCAAGTACCCGAG
CGCCAACTCAGCCGCTGATTCGTTCCGGGTGGGATGTTCATGTATGTCCA
CGAGCCTCGCCGTCTTTGTCGCCGTCATAATCGCCTATTAGTATTTATAG
TATCGACACTGACTATATGTGTACTAGTTTCTCTATCCTCTTAGCTCGTC
GTCGTCTCTCGGATACATTTTTTTCGTTTTTTGTTTTGTTTCATCTCACT
TATAGCCGATGGGCCTCATTCCATCCTGCGTGTGGTCACTATTAATAAGG
ATCTTCCCATCTCTCCAGGGTTCACGCCTTGCAATTTTTATCGCGATGCA
AGTTCAGCACTCTTACAACTCGTCAACCAATGGTTGAATTTTACCTACTC
ACGTTCTCACGCTTTCCGCTACGGAAGCAAAAATTGAAATCCCGATTTAG
CCAAGAATCGAACTCACGACCTCCGCACTAGCAGGTGTGCAGGTTGCTTA
CTAGACCACTCGGGCGACGAGAAGTACAACAAAATAATCAAAACTAACGC
TGCCCGTCGATTCGGCCTAGGGCCATCCTCATCGTAGTCATCAGACTTCA
TCACATCATCGCGCGCTACTCGTACCCCTTTGCTCCCGATGCTCCACGGT
CTGTACAGTCTCTTGGCGTTAATAGCTTGCTTGTTTGGCGTAGCAACCGA
TGTGCTTCTAGTCTAGCGTAGTAAGTATTTCAAAACTCTGGGGCCAGGTA
AGAAAGGTTTCCCGTGTAGTGAAAGCCTTCCAACTATCAGCACACAGATT
TATAACTACCTTAGATTGTGTTCATTTTCCGAGTCGATTTCTGACCACAA
GAGTGATGCAAGTAGAAAAGCAACAGTCGGAAATCTTGGGGCCGGAAATT
GCGGATTCCGAATGCATAAGATGTGGTGTTTGCCGATAATGCATTTCCCA
AACCCCGCTTGTTGTTCTCTTTGAACCGCGAAACAAATAATATATGAAAA
ATATTAAAAAAAAAATTGAAAAATGAAAGCGAGAATTGAATCGAGAAATG
GAAATACGCAAAAATCCTTTGGAAAGTGCACACAGCAGTTGTAAAACAAA
ATACTTCACCCATCAGTTTAGAGTTGTCAAAATCAACTTCCATCGCACGC
GAACCCGCGCTCGACGACTTTGCTGAGGGGCAGGAGTCATTTTCGTCAAT
AGAACGCTGCCCCCAGCCCGTGATCGCTGCACTACACGGCGCGTGCGTCG
GAGGAGCGGTAGACCTCGCGTGCGCGTGCGACATCCGCTTTTGCTCCCAA
GACGTAAAGTTCTGCATCGCGGAGGTCAAGGTTGGGCTTGCGGCGGACGT
TGGGACCCTACAGAGAATGCCAAGGGTGAGACTTAAACGTTGTTTTAAAA
GAGGATTTTTTTGGTGTTTTTTTGTGGTTTTATTGCGATGATGGATTTCA
ACCGTAAGCCTCGTAACATTGTATGGTAGGGTGAGGCGTTGCCATGCTAC
TGAACATATCGTGAGGAGGTGCGCCATGAGGGATAGGGCGTGTATCGTGT
TTCGTCACCAGAGACCATCAGGATTGCTTGAAATGCAAAGCTTGCAACAG
ATCTAGGCATCGGCCATCATGGGCACGTCTCTACTCGCACTACCAGTACG
TCGAGCTCAAAGGTCAAAGATCGATCTGTCGCCAGCGCAAACTTCTCCCC
CCTCCGCTCTTCCTTTTCTTTCCCTTATTGATAACACCCTCGATGTCCTT
CATGTCCTTCATGTTTGGAATCGTGACGTGTGTGGCCCGACAAAACCCCT
GGCGCATTGAGAGCGCAGATTGTGGGCAACGAATCGCTCTGCAGGGAGCT
CGCGTACACCGGTCGGACCTTTGGTGCAGCCGAGGCCGCCCGCATGGGGC
TGGTTTCGCAGGTCCTAGGACCGGGGTCCCGTCGACAAGAAGTCGTACAA
GCTTCCTTGGTGACAGCAGCTGAGATCGCGCGACAGAGTCCGGTGGCCGT
GTTCGGCACGAAACGAAACCTCATCTATGGTAGAGACCACAGCATCGAGG
ATGGGTTAGAATACGCAGCGACGTGGAGCGGTGCGGCGCTTCAGGCGGAA
GATCTACGAAAGGCGATGGGGGCCAGTCTACGGAGAAAGAGCAGTTCTAA
GGCGCCTTCACACCCAGGGTTTTCTAAGCTTTAGTGGTGCGTTGCCATAC
TTGGGAGCCCGTACCGATGCCCCATGCCAAGTTTATCTTGCATTTTTTTT
CACATAGGAGGTCGATGTTCCCAGCAAGGTTTTGATGTGACGATATATGC
TGCAGACCGTTGTAGTGGGTTCAAACATGGCAGTACACTAGCAGTGCTGA
TAAACGTCTTGGCGAAAAAGCTCTATTTATTGTCGTTTGATAGTGAAAAC
GATTTTTTGTCGCAGCGCTCCCGACAAATCAATCGCCATCAAGGAACCGA
GGGCTTCCCAGACGCTCGCCCAAGATTGATATGCTTTTCAGGTCGGATGT
TGTCACTAAGATTTCGAGAAATAATTTTGAGGCTGCGGCATAGTAATAAT
GCACAACGTGCCAAGCTTATGATGGTTGTGAACGTCACCGGCGGTTTCCC
CTCTGCAATCTCCGCCCGACAAACCACTTGTGCTCAAGGGCTGCGGTACT
AGTCCAAACTACTATTAATACGAACAAACTTTCCC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1051:50292..62276+ >mRNA_F-serratus_M_contig1051.540.1 ID=mRNA_F-serratus_M_contig1051.540.1|Name=mRNA_F-serratus_M_contig1051.540.1|organism=Fucus serratus male|type=CDS|length=1734bp|location=Sequence derived from alignment at F-serratus_M_contig1051:50292..62276+ (Fucus serratus male) ATGACGGCTTACGATGATTTTGAAACCCTCTTGGTCTCAAGACCAGAATC ATGGGTGCTACATGTGATGATTAATCGTCCGGCCAAGAGGAACGCGATGA ACGCCCGTTTTTGGATTGAGTTTCGCGAATGCTTTGAACGCATTTCCAGA GATGCAGATGTGCGGGTCGTCACCGTCTCTGGTGCAGATGACGGCTTACG ATGATTTTGAAACCCTCTTGGTCTCAAGACCAGAATCATGGGTGCTACAT GTGATGATTAATCGTCCGGCCAAGAGGAACGCGATGAACGCCCGTTTTTG GATTGAGTTTCGCGAATGCTTTGAACGCATTTCCAGAGATGCAGATGTGC GGGTCGTCACCGTCTCTGGTGCAGGCGATCACTTCTCTGCGGGCCTTGAC CTTGAAGACACCTCGAATTTCGATACCATCGCGAGGGAAACCAAGGACGT GGCAAGGCGTGCGTTTCGGTTCCGCACGCTGGCGAAGACCATGCAGGCGA TCACTTCTCTGCGGGCCTTGACCTTGAAGACACCTCGAATTTCGATACCA TCGCGAGGGAAACCAAGGACGTGGCAAGGCGTGCGTTTCGGTTCCGCACG CTGGCGAAGACCATGCAGGAGTCATTTTCGTCAATAGAACGCTGCCCCCA GCCCGTGATCGCTGCACTACACGGCGCGTGCGTCGGAGGAGCGGTAGACC TCGCGTGCGCGTGCGACATCCGCTTTTGCTCCCAAGACGTAAAGTTCTGC ATCGCGGAGGTCAAGGTTGGGCTTGCGGCGGACGTTGGGACCCTACAGAG AATGCCAAGGGAGTCATTTTCGTCAATAGAACGCTGCCCCCAGCCCGTGA TCGCTGCACTACACGGCGCGTGCGTCGGAGGAGCGGTAGACCTCGCGTGC GCGTGCGACATCCGCTTTTGCTCCCAAGACGTAAAGTTCTGCATCGCGGA GGTCAAGGTTGGGCTTGCGGCGGACGTTGGGACCCTACAGAGAATGCCAA GGATTGTGGGCAACGAATCGCTCTGCAGGGAGCTCGCGTACACCGGTCGG ACCTTTGGTGCAGCCGAGGCCGCCCGCATGGGGCTGGTTTCGCAGGTCCT AGGACCGGGGTCCCGTCGACAAGAAGTCGTACAAGCTTCCTTGGTGACAG CAGCTGAGATCGCGCGACAGAGTCCGGTGGCCGTGTTCGGCACGAAACGA AACCTCATCTATGGTAGAGACCACAGCATCGAGGATGGGTTAGAATACGC AGCGACGTGGAGCGGTGCGGCGCTTCAGGCGGAAGATCTACGAAAGGCGA TGGGGGCCAGTCTACGGAGAAAGAGCAGTTCTAAGGCGCCTTCACACCCA GGGTTTTCTAAGCTTTAGATTGTGGGCAACGAATCGCTCTGCAGGGAGCT CGCGTACACCGGTCGGACCTTTGGTGCAGCCGAGGCCGCCCGCATGGGGC TGGTTTCGCAGGTCCTAGGACCGGGGTCCCGTCGACAAGAAGTCGTACAA GCTTCCTTGGTGACAGCAGCTGAGATCGCGCGACAGAGTCCGGTGGCCGT GTTCGGCACGAAACGAAACCTCATCTATGGTAGAGACCACAGCATCGAGG ATGGGTTAGAATACGCAGCGACGTGGAGCGGTGCGGCGCTTCAGGCGGAA GATCTACGAAAGGCGATGGGGGCCAGTCTACGGAGAAAGAGCAGTTCTAA GGCGCCTTCACACCCAGGGTTTTCTAAGCTTTAG back to top
|