mRNA_F-serratus_M_contig1050.535.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S4WFG2_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WFG2_9DINO) HSP 1 Score: 178 bits (452), Expect = 1.570e-53 Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = 1 Query: 64 SDDDIPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 +D+D+P LE+ G S + + GKQNR+EKK+RKAV KLGMK V IVRVTVKKSKN+LFVISKPDVHKSP+S+TY++FGEAKIEDLSAQAQ AA++F+Q A ++ +++ VDE+GVEPKDIEL+MSQA C+R+ AVQALK N DIV AIM+L+ Sbjct: 28 TDEDMPNLENADG---SKKEERGKQNRSEKKSRKAVAKLGMKPVSGIVRVTVKKSKNILFVISKPDVHKSPNSDTYIVFGEAKIEDLSAQAQASAAQQFTQQSAEALAEPAAAAKADAPKIEEVEDTGDVDESGVEPKDIELVMSQAGCTRAKAVQALKSNSNDIVEAIMQLS 197
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A1Y1I5Y3_KLENI (Nascent polypeptide-associated complex (NAC) alpha subunit family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5Y3_KLENI) HSP 1 Score: 177 bits (449), Expect = 5.060e-53 Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 1 Query: 145 NEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 +EKK+RKA+QKLGMK VP + RVT+KKSKN+LFVISKPDV KSP+S+TY+IFGEAKIEDLS+Q Q QAA++F PEA +SI AD+D DE VDETGVEPKDIEL+M+QA SR+ AV ALK+ DGDIV+AIMELT Sbjct: 62 SEKKSRKAMQKLGMKPVPGVQRVTIKKSKNILFVISKPDVFKSPASDTYIIFGEAKIEDLSSQLQSQAAQQFQAPEAALETPKQSASI------ADLDDDEEVDETGVEPKDIELVMTQAGVSRAKAVSALKQTDGDIVSAIMELT 201
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S4WC97_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WC97_9DINO) HSP 1 Score: 177 bits (450), Expect = 5.650e-53 Identity = 108/184 (58.70%), Postives = 133/184 (72.28%), Query Frame = 1 Query: 40 EVEDIDGDSDDDIPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFV---DETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 E E D D+D+D+P LE+ G S + KQNR+EKK+RKAV KLGMK VP IVRVTVKKSKN+LFVISKPDVHKSP+S+TY++FGEAKIEDLSAQAQ AA++F+Q A S+ PA++ ++ DE GVEPKDIEL+MSQ CSR+ AV+ALK N DIV AIM+L+ Sbjct: 40 EEESSDDDTDEDMPNLENADG---SKKEDRSKQNRSEKKSRKAVAKLGMKPVPGIVRVTVKKSKNILFVISKPDVHKSPNSDTYIVFGEAKIEDLSAQAQANAAQQFTQQAADAV-----SATPAMAEAPKVEEXXXXGEEDEAGVEPKDIELVMSQVQCSRAKAVKALKNNKNDIVEAIMQLS 215
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S3GRY5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRY5_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.010e-53 Identity = 113/194 (58.25%), Postives = 137/194 (70.62%), Query Frame = 1 Query: 1 MAEFEEAKVAADPEVEDIDGDSDDDIPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 MA+ EE ++ D +D D +DDD+P LE+ G D+A GKQNR EKK+RKAV KLGMK VP I+RVTVKKSKN+LFVIS+PDVHKS +S+TYV+FGEAKIEDLSAQAQ AA++F+Q A A D E VDETGVEPKDIEL++SQ CSR+ AV+ALK N+ DIV AIM L+ Sbjct: 29 MAKIEEV-ISGDEAADDSD--TDDDMPHLENADGKGDAAGA--GKQNRAEKKSRKAVLKLGMKPVPGIMRVTVKKSKNILFVISQPDVHKSATSDTYVVFGEAKIEDLSAQAQASAAQQFTQGGAGRGAAEVADKAEAAKVEEVEDDGEEVDETGVEPKDIELVVSQVQCSRAKAVKALKANNNDIVEAIMTLS 217
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S4W3I8_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W3I8_9DINO) HSP 1 Score: 176 bits (447), Expect = 7.010e-53 Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = 1 Query: 40 EVEDIDGDSDDDIPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVS-----SGADIDTDEFVDE-----TGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 E E D +D+D+P LE+ G S + + KQNR+EKK+RKAVQKLGMK VP +VRVTVKKSK++LFVISKPDVHKSP S+TY++FGEAKIEDLSAQAQ AA++F+Q S+ AVS + AD E VDE TG+EPKDIEL+MSQ SCSR+ AVQALK N DIV AIM+L+ Sbjct: 12 EEESSDDSTDEDMPNLENADG---SKKEERSKQNRSEKKSRKAVQKLGMKPVPGVVRVTVKKSKSILFVISKPDVHKSPISDTYIVFGEAKIEDLSAQAQASAAQQFTQ-----------QSVEAVSEHVESAKADAPKIEEVDEXXXXXTGIEPKDIELVMSQVSCSRARAVQALKSNKNDIVEAIMQLS 188
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S1FAV2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FAV2_NOCSC) HSP 1 Score: 176 bits (446), Expect = 9.040e-53 Identity = 106/170 (62.35%), Postives = 126/170 (74.12%), Query Frame = 1 Query: 73 DIPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 D+P LE D+ E GKQNR+EKK+RKAVQKLGMK VP I RVTVKKSKN+LFVISKPDVHKS +S+TY++FGEAKIEDLSAQAQ AAE+F+Q A + P V ++D D DETG+EPKDIEL+MSQ SCSRS AV AL+ N+ DIV AIM+L+ Sbjct: 24 DMPNLE---AVDEKGEGGSGKQNRSEKKSRKAVQKLGMKPVPGITRVTVKKSKNILFVISKPDVHKSQNSDTYIVFGEAKIEDLSAQAQASAAEQFTQSNAAAFDPETAAQ-PTVE---EVDEDS-ADETGIEPKDIELVMSQVSCSRSKAVSALRANNNDIVEAIMQLS 185
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S3CMT6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CMT6_9SPIT) HSP 1 Score: 176 bits (445), Expect = 1.360e-52 Identity = 106/170 (62.35%), Postives = 128/170 (75.29%), Query Frame = 1 Query: 76 IPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELTM 585 +PELE + GG GKQ+R+EKK+RKA+QKLGMK +P ++RVT+KKSKN+LFVISKPDV KSP+++TYVIFGEAKIEDLSAQAQ AAE+F EA S+ S A+ D E VDETGVEPKDI+L+MSQA +R AV ALK+ DGDIV+AIMELTM Sbjct: 31 MPELEGEDGG------SRGKQSRSEKKSRKAIQKLGMKPLPGVMRVTIKKSKNILFVISKPDVFKSPATDTYVIFGEAKIEDLSAQAQASAAEQFKMSEAQAIESKDTSA-----SAAEEDEGE-VDETGVEPKDIDLVMSQAGVTRGKAVNALKQADGDIVSAIMELTM 188
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S1B8E0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8E0_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.800e-52 Identity = 107/185 (57.84%), Postives = 138/185 (74.59%), Query Frame = 1 Query: 61 DSDDDIPELEDQGGGDDSA---EPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERF-SQPEAXXXXXXXXS-------SIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 DSDDD+PELE+Q ++A + G KQNR+EKK+RKA+QKLGM+ VP +VRVTVKKSK+VLFVIS PDV KSP+S+TYV+FGEAK EDL+A AQ AA++F SQ A + S+ A+S A + +E +DE+GVEPKDIEL+MSQA CSR+ AV+AL++ND D+VN+IM LT Sbjct: 13 DSDDDVPELEEQNEETENATEGDVPGSKQNRSEKKSRKAMQKLGMRPVPGVVRVTVKKSKSVLFVISNPDVFKSPNSDTYVVFGEAKSEDLNAGAQAHAAKQFRSQAGAGAEALHRAAAGTAATPSVEAISEEAGEEEEEALDESGVEPKDIELVMSQAGCSRAKAVKALRENDNDLVNSIMSLT 197
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7I4C331_PHYPA (NAC-A/B domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C331_PHYPA) HSP 1 Score: 172 bits (437), Expect = 9.240e-52 Identity = 102/161 (63.35%), Postives = 121/161 (75.16%), Query Frame = 1 Query: 100 GGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVSSGADIDTDEFVDETGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 G DDSA KQ+R EKK+RKA+QKLGMK V + RVT+KKSKN+LFVISKPDV KSP+S+TYVIFGEAKIEDLS+Q Q QAAE+F PEA + A S+ A+ D + DETGVEPKDIEL+M+QA SR+ AV+ALK DGDIV+AIM LT Sbjct: 5 GEDDSAAGGKSKQSRGEKKSRKAMQKLGMKPVTEVTRVTIKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKVPEAANF-----EAKSAPSAAAEADDEGDFDETGVEPKDIELVMTQAGVSRAKAVKALKSTDGDIVSAIMNLT 160
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Match: A0A7S4TA21_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TA21_9DINO) HSP 1 Score: 175 bits (443), Expect = 1.320e-51 Identity = 109/183 (59.56%), Postives = 133/183 (72.68%), Query Frame = 1 Query: 64 SDDDIPELEDQGGGDDSAEPKGGKQNRNEKKARKAVQKLGMKQVPSIVRVTVKKSKNVLFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSQPEAXXXXXXXXSSIPAVS-----SGADIDTDEFVDE-----TGVEPKDIELIMSQASCSRSAAVQALKKNDGDIVNAIMELT 582 +D+D+P LE+ G S + + KQNR+EKK+RKAVQKLGMK VP +VRVTVKKSK++LFVISKPDVHKSP S+TY++FGEAKIEDLSAQAQ AA++F+Q S+ AVS + AD E VDE TG+EPKDIEL+MSQ SCSR+ AVQALK N DIV AIM+L+ Sbjct: 71 TDEDMPNLENADG---SKKEERSKQNRSEKKSRKAVQKLGMKPVPGVVRVTVKKSKSILFVISKPDVHKSPISDTYIVFGEAKIEDLSAQAQASAAQQFTQ-----------QSVEAVSEHVESAKADAPKIEEVDEXXXXXTGIEPKDIELVMSQVSCSRARAVQALKSNKNDIVEAIMQLS 239 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1050.535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1050.535.1 >prot_F-serratus_M_contig1050.535.1 ID=prot_F-serratus_M_contig1050.535.1|Name=mRNA_F-serratus_M_contig1050.535.1|organism=Fucus serratus male|type=polypeptide|length=197bp MAEFEEAKVAADPEVEDIDGDSDDDIPELEDQGGGDDSAEPKGGKQNRNEback to top mRNA from alignment at F-serratus_M_contig1050:273243..278768- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1050.535.1 ID=mRNA_F-serratus_M_contig1050.535.1|Name=mRNA_F-serratus_M_contig1050.535.1|organism=Fucus serratus male|type=mRNA|length=5526bp|location=Sequence derived from alignment at F-serratus_M_contig1050:273243..278768- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1050:273243..278768- >mRNA_F-serratus_M_contig1050.535.1 ID=mRNA_F-serratus_M_contig1050.535.1|Name=mRNA_F-serratus_M_contig1050.535.1|organism=Fucus serratus male|type=CDS|length=1182bp|location=Sequence derived from alignment at F-serratus_M_contig1050:273243..278768- (Fucus serratus male)back to top |