mRNA_F-serratus_M_contig105.527.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.527.1
Unique NamemRNA_F-serratus_M_contig105.527.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: D8R4W8_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R4W8_SELML)

HSP 1 Score: 222 bits (565), Expect = 3.990e-64
Identity = 107/237 (45.15%), Postives = 146/237 (61.60%), Query Frame = 1 
Query:  118 TEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGE 828
            T++D   +R +NA  I++   +A+  I T+D +  +GWT  E+I   PV NW AY   L+ +PVL K   SGIVY++GDW AQ +EG  +    R R+ RS + G  LHG LSH +Y +CE +F F +W    WV   KV  DQ +W  FWN+VY   +G L+ ++  T    + +T  PL+ AG +LWP AHLVTYG+IP E RLLWVD VE++WVTILS  + E+A A    D E
Sbjct:    2 TDKDRQVDRFLNASLIAAAAAYALGKIVTVDQDYWQGWTFYEIIKYAPVHNWSAYEEALKSHPVLAKMMISGIVYSIGDWMAQCYEGKPVLDFSRTRMLRSGLVGFCLHGSLSHYYYHVCEALFPFKEW----WVVPLKVGFDQTIWSAFWNSVYFITLGLLRLENPVTIVSELRSTFFPLLTAGWKLWPFAHLVTYGLIPVEQRLLWVDCVELVWVTILSMYSNEKAEARSSEDAE 234
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BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: K7M2R0_SOYBN (Uncharacterized protein n=7 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7M2R0_SOYBN)

HSP 1 Score: 224 bits (572), Expect = 5.490e-64
Identity = 107/239 (44.77%), Postives = 146/239 (61.09%), Query Frame = 1 
Query:  106 TESRTEEDAAFNRVVNAGFISSVVL-----FAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARA 807
            +E  TE D    R+ ++  ++++++     FA+  + TID +   GWT  E++  IP  NW+AY   L+ NPVL K   SGIVY++GDW AQ +EG  L    R RV RS + G  LHG LSH +Y LCE +F F +W    WV   KV  DQ +W   WN++Y   +G L+ +S       + +T LPL+ AG +LWP AHL+TYGVIP E RLLWVD VE+IWVTILS  + E++ A
Sbjct:   68 SEPHTESDVVVPRLTSSSTVNAIIVLGFGTFAVTKLLTIDHDYWHGWTLFEIVRYIPEHNWIAYEQALKANPVLAKMAISGIVYSIGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQLCEALFPFQEW----WVVPAKVAFDQTVWSAIWNSIYFVVLGLLRFESLTNIYGELKSTFLPLLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEA 302
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BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A072VBB5_MEDTR (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein n=5 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VBB5_MEDTR)

HSP 1 Score: 224 bits (570), Expect = 9.500e-64
Identity = 109/254 (42.91%), Postives = 148/254 (58.27%), Query Frame = 1 
Query:  106 TESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGESAAAGEVQEEAGT 867
            TE  T+ D    R +NA  +     FA+  + TID +   GWT  E++  +P  NW+AY   L+ NPVL K   SG+VY++GDW AQ +EG  +    R R+ RS + G  LHG LSH +Y LCE +F F  W    WV   KV  DQ +W   WN +Y   +G L+ DS +     + +T LP++ AG +LWP AHL+TYGV+P E RLLWVD +E+IWVTILS  + E++        ES  + EV E AG+
Sbjct:   68 TEVATDTDILTGRAINAAIVLGFGAFAVTKLLTIDHDYWHGWTLYEILKYVPEHNWIAYEQSLKANPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRARLFRSGLVGFTLHGSLSHYYYQLCEALFPFQQW----WVVPAKVAFDQTVWSAIWNTIYFVVLGLLRFDSLDNIYGELKSTFLPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCIELIWVTILSTYSNEKS--------ESRKSEEVSETAGS 309
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.110e-63
Identity = 106/234 (45.30%), Postives = 151/234 (64.53%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMF-DFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGD---SFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGE 828
            N ++N G + +  L ++  + T+D  + RGW+  E+ LRIP+DNW +Y++VL   P+  KA TS  VY +GD+ AQ  EG  +  + R R+ARS +AGLL HGP+SH WY+  E +F + +     +W  A K+ +DQ +WGPFWN  YI  +G +K     SFE+    +  T +PL+++G++LWPLAH VTYG+IP ENRLLWVD VEI WVTIL+  AA     + EP G+
Sbjct:   53 NAILNTGVVVAFALLSLNQMATVDVGMMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAA---AVDPEPTGD 283
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BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A176VN09_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VN09_MARPO)

HSP 1 Score: 227 bits (579), Expect = 1.760e-63
Identity = 109/240 (45.42%), Postives = 146/240 (60.83%), Query Frame = 1 
Query:   88 PNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARA 807
            P  +W+ ++  EE+   +R++NA  + S  +FA+  +FTID E   GWT  E+I   P+ NW AY  +L+ +PVL K   SG VY+LGDW AQ  EG       R R+ RS + G  LHG LSH +Y  CE +F F  W    WV   KV  DQ +W  FWN+VY   VG L+ +S  T  + + +T  PL+ AG +LWP AH+VTYG +P E RLLWVD VEI+WVTIL+  + E+A A
Sbjct:  178 PKYVWFAKTAEEENVIIDRLINATIVGSAGVFALTKMFTIDHEYWHGWTLIEIIRYAPIHNWFAYEELLQTHPVLAKMAISGTVYSLGDWIAQCCEGKGPLEFNRSRMLRSGLVGFGLHGSLSHFYYHFCEWLFPFQGW----WVVPLKVAFDQTIWSGFWNSVYFIMVGLLRFESPVTIVKELRSTFFPLLTAGWKLWPFAHIVTYGFVPVEQRLLWVDMVEILWVTILAMYSNEKAEA 413
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: Q5XEV3_ARATH (At4g03410 n=8 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q5XEV3_ARATH)

HSP 1 Score: 221 bits (564), Expect = 6.800e-63
Identity = 107/235 (45.53%), Postives = 142/235 (60.43%), Query Frame = 1 
Query:  106 TESRTEE-DAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARA 807
            +E + E+ D   +R +NA  + +    A+  + TID +  +GWT  E++   P  NW AY  +L+ NPVL K   SGIVY+LGDW AQ +EG  L    R RV RS + G  LHG LSH +Y  CE +F F +W    WV   KV  DQ +W   WN++Y   +G L+  S       + TT LP++ AG +LWPLAHLVTYGVIP + RLLWVD +E+IWVTILS  + E+A A
Sbjct:   72 SEDKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEALFPFQEW----WVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEA 302
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BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: UPI0019221EC0 (LOW QUALITY PROTEIN: protein SYM1-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI0019221EC0)

HSP 1 Score: 221 bits (562), Expect = 2.180e-62
Identity = 105/231 (45.45%), Postives = 139/231 (60.17%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGES 831
            +R +NA  +  V   A+  + TID +   GWT  EV+  +P  NW+AY   L+ NPV+ K   SGIVY+LGDW AQ +EG  L    R R+ RS + G  LHG LSH +Y  CE +F F DW    WV   KV+ DQ +W   WN +Y   +G L+ +S +   E +  T  P++ AG +LWP AHL+TYGVIP E RLLWVD VE+IWVTILS  + E++ A    D +S
Sbjct:  104 SRAINASIVLGVGTLAVSKLLTIDHDYWHGWTLYEVLRYVPEHNWIAYEQALKANPVIAKMAISGIVYSLGDWIAQCYEGNPLFDFDRTRLFRSGLVGFTLHGSLSHYYYQFCEALFPFDDW----WVVPAKVLFDQTVWAAIWNTIYFVVLGFLRFESSDNIFEELKATFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARITEDADS 330
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: F4JI90_ARATH (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein n=5 Tax=Arabidopsis TaxID=3701 RepID=F4JI90_ARATH)

HSP 1 Score: 221 bits (564), Expect = 2.430e-62
Identity = 107/235 (45.53%), Postives = 142/235 (60.43%), Query Frame = 1 
Query:  106 TESRTEE-DAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARA 807
            +E + E+ D   +R +NA  + +    A+  + TID +  +GWT  E++   P  NW AY  +L+ NPVL K   SGIVY+LGDW AQ +EG  L    R RV RS + G  LHG LSH +Y  CE +F F +W    WV   KV  DQ +W   WN++Y   +G L+  S       + TT LP++ AG +LWPLAHLVTYGVIP + RLLWVD +E+IWVTILS  + E+A A
Sbjct:   72 SEDKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAYEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQFCEALFPFQEW----WVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEA 302
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A2K3N923_TRIPR (Peroxisomal membrane protein 2-like (Fragment) n=4 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N923_TRIPR)

HSP 1 Score: 219 bits (558), Expect = 5.630e-62
Identity = 99/228 (43.42%), Postives = 139/228 (60.96%), Query Frame = 1 
Query:  118 TEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQA 801
            T++D   +R +NA  +     FA+  + TID +   GWT  E++  +P  NW+AY   L+ NPVL K   SG+VY++GDW AQ +EG  +    R R+ RS + G  LHG LSH +Y LCE +F F  W    WV   KV  DQ +W   WN++Y   +G L+ DS       + +T +P++ AG +LWP AHL+TYGV+P E RLLWVD +E+IWVTILS  + E++
Sbjct:   77 TDDDILISRAINATIVLGFGAFAVTKLLTIDHDYWHGWTLYEILRYVPEHNWIAYEQSLKANPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRARLFRSGLVGFTLHGSLSHYYYQLCETLFPFQQW----WVVPAKVAFDQTVWSAIWNSIYFVVLGLLRFDSLPNIYGELKSTFVPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCIELIWVTILSTYSNEKS 300
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A2I4E245_JUGRE (mpv17-like protein isoform X1 n=9 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4E245_JUGRE)

HSP 1 Score: 221 bits (562), Expect = 6.070e-62
Identity = 120/279 (43.01%), Postives = 158/279 (56.63%), Query Frame = 1 
Query:  106 TESRTEEDAAFNRVVNAGFISSVVL----FAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGESAAAGEVQEEAGT*AEMEPAIKKKTAL*SRDLTR 930
            T    EED  F+R+V+    +S+VL    FA+  + TID +   GWT  EV+   P  NW+AY   L+ NPVL K   SGIVY+LGDW AQ +EG  L    R R+ RS + G  LHG LSH +Y  CE +F F DW    WV   KV  DQ +W   WN++Y   +G L+ +S       + TT  PL+ AG +LWP AHL+TYG+IP E RLLWVD VE+IWVTILS  + E++ A            EV  EA   +   P ++++    +R LTR
Sbjct:   96 TSEGREEDDDFDRLVSKAINASIVLGFGTFAVSKLLTIDYDYWHGWTLYEVLRYAPEHNWIAYEQALKANPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRMFRSGLVGFTLHGSLSHYYYQFCEALFPFEDW----WVVPAKVAFDQTVWAAVWNSIYFVVLGFLRFESPTNIFSELKTTFWPLLTAGWKLWPFAHLITYGLIPLEQRLLWVDCVELIWVTILSTYSNEKSEAR---------ISEVSVEANPSSSSSPKVEERRNFQTR-LTR 360
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8R4W8_SELML3.990e-6445.15Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
K7M2R0_SOYBN5.490e-6444.77Uncharacterized protein n=7 Tax=Glycine subgen. So... [more]
A0A072VBB5_MEDTR9.500e-6442.91Peroxisomal membrane 22 kDa (Mpv17/PMP22) family p... [more]
A0A448Z6W8_9STRA1.110e-6345.30Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A176VN09_MARPO1.760e-6345.42Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
Q5XEV3_ARATH6.800e-6345.53At4g03410 n=8 Tax=Arabidopsis thaliana TaxID=3702 ... [more]
UPI0019221EC02.180e-6245.45LOW QUALITY PROTEIN: protein SYM1-like n=1 Tax=Hib... [more]
F4JI90_ARATH2.430e-6245.53Peroxisomal membrane 22 kDa (Mpv17/PMP22) family p... [more]
A0A2K3N923_TRIPR5.630e-6243.42Peroxisomal membrane protein 2-like (Fragment) n=4... [more]
A0A2I4E245_JUGRE6.070e-6243.01mpv17-like protein isoform X1 n=9 Tax=Juglandaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:844079..851513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.2
Seed ortholog evalue1.6e-40
Seed eggNOG ortholog2880.D7G2C4
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0016020,GO:0016021,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-16_001670.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size2107
Cds size387
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928879.7456017-UTR-F-serratus_M_contig105:844078..8453151622928879.7456017-UTR-F-serratus_M_contig105:844078..845315Fucus serratus maleUTRF-serratus_M_contig105 844079..845315 -
1690962612.680618-UTR-F-serratus_M_contig105:844078..8453151690962612.680618-UTR-F-serratus_M_contig105:844078..845315Fucus serratus maleUTRF-serratus_M_contig105 844079..845315 -
1622928879.8285842-UTR-F-serratus_M_contig105:846359..8466291622928879.8285842-UTR-F-serratus_M_contig105:846359..846629Fucus serratus maleUTRF-serratus_M_contig105 846360..846629 -
1690962612.737371-UTR-F-serratus_M_contig105:846359..8466291690962612.737371-UTR-F-serratus_M_contig105:846359..846629Fucus serratus maleUTRF-serratus_M_contig105 846360..846629 -
1622928879.8422296-UTR-F-serratus_M_contig105:847195..8472921622928879.8422296-UTR-F-serratus_M_contig105:847195..847292Fucus serratus maleUTRF-serratus_M_contig105 847196..847292 -
1690962612.7495408-UTR-F-serratus_M_contig105:847195..8472921690962612.7495408-UTR-F-serratus_M_contig105:847195..847292Fucus serratus maleUTRF-serratus_M_contig105 847196..847292 -
1622928879.8588183-UTR-F-serratus_M_contig105:851397..8515131622928879.8588183-UTR-F-serratus_M_contig105:851397..851513Fucus serratus maleUTRF-serratus_M_contig105 851398..851513 -
1690962612.7575278-UTR-F-serratus_M_contig105:851397..8515131690962612.7575278-UTR-F-serratus_M_contig105:851397..851513Fucus serratus maleUTRF-serratus_M_contig105 851398..851513 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928879.7837567-CDS-F-serratus_M_contig105:845315..8454721622928879.7837567-CDS-F-serratus_M_contig105:845315..845472Fucus serratus maleCDSF-serratus_M_contig105 845316..845472 -
1690962612.6928704-CDS-F-serratus_M_contig105:845315..8454721690962612.6928704-CDS-F-serratus_M_contig105:845315..845472Fucus serratus maleCDSF-serratus_M_contig105 845316..845472 -
1622928879.8024628-CDS-F-serratus_M_contig105:845864..8460621622928879.8024628-CDS-F-serratus_M_contig105:845864..846062Fucus serratus maleCDSF-serratus_M_contig105 845865..846062 -
1690962612.7043843-CDS-F-serratus_M_contig105:845864..8460621690962612.7043843-CDS-F-serratus_M_contig105:845864..846062Fucus serratus maleCDSF-serratus_M_contig105 845865..846062 -
1622928879.8165538-CDS-F-serratus_M_contig105:846327..8463591622928879.8165538-CDS-F-serratus_M_contig105:846327..846359Fucus serratus maleCDSF-serratus_M_contig105 846328..846359 -
1690962612.7185366-CDS-F-serratus_M_contig105:846327..8463591690962612.7185366-CDS-F-serratus_M_contig105:846327..846359Fucus serratus maleCDSF-serratus_M_contig105 846328..846359 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.527.1prot_F-serratus_M_contig105.527.1Fucus serratus malepolypeptideF-serratus_M_contig105 845316..846359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.527.1

>prot_F-serratus_M_contig105.527.1 ID=prot_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNRE
AVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSR
QAAEQARANDEPDGESAAAGEVQEEAGT*
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mRNA from alignment at F-serratus_M_contig105:844079..851513-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.527.1 ID=mRNA_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=mRNA|length=7435bp|location=Sequence derived from alignment at F-serratus_M_contig105:844079..851513- (Fucus serratus male)
GAGGCGGACGAGTTCCCCAAGGCCAACAACGGAAGCTCACCACATGAAGA
GGACGGCGCCCTTTCAGACGATCCTGCACCCTCCACACCGAACATTCTGT
GGTGGACAGAGAGCAGGTGATATTTTCCCGCCCTCGTTCGGTCCGGTTTC
CGTCGTTTTGTCGAACGACTATATATAATACTATTTTTTGGTTTGACATT
ACGTCTACCGTCCCTGGTGTTATCCCGTCGAGAGCTCGGGCAGCCTCAGG
ATTGCGCGACGGGATCAATTTTATTGTAAAGACTTGAAATCCCCTCGCAA
AATTATCGAATGCAAGGCCCTCGTCGCCCGAGTGGTCTATAAATAGTAGA
TAACCACGTACACCTGCTATTAAGAGTGCAGAAGTCGTGAGATCGATTCT
TGTCAAAATAATTCTGGCGTCCGTACCGGAACGCGTAGGTACTAATAGTA
AGTAAAATTCAATAACCATTGGTTGACAAGTTGTAAGAGTGTTGAACTTG
CATCGCGATGAAAATTCGTAAGGCGTGAACCGGGGAGAGATGGGAAGATC
CTTAGTGAGCTCAGGCAGGATGGCTATGTTTAGGTCCAACGGCTACAAGT
GAGGAGCCATGCTGGCATTGGTGCGCTTTATCGTAGGGGTGCGTTGAGTT
AGCTGTGGTCGGTAAGATCGCTACCTAGCGATCGATCGATCGATAAAATA
AAAATAAATAAAAATGGCCCAGATTATAATTTTTCCTTGAGGGCGTTCGC
CGTTCCTAATTTTGTGTTCCAGATCGCCGAGGAATGCCCCCCCCCCGGCA
AAATCCCCGATCGCACTCCACCAACCTTGCAGCTCATTAGGCAGGGATGC
GAAGGAAATGAACCTCGAAATTCGATCGCCGTGGCCTCCAAGTAGCTTTA
GTAACTCTGATTGACAATATCATCCTTAGGGTATCCTCAGGGCAAACGGC
AAGCTCCAAGCGTTTGAGCATGGCGGTTTCAAAGGGCAAGGTACACGGCC
TCGAAGAACAAATAGATACCTGGTAGTCATCCCCAAACCTTAGTGTGGTC
TACAGTTACTGTAATTAGTCCAAGGTGTTTTTTTGACCTCGCCATAGGTA
CCAGTATAATTCTATTTTATAAGTTCACAGTACTGTAGAACAGCGGAAAC
GCGCGGACGTTTTGGTTGCAGATACGAGCATAGCTGTGTTTCCTCCGTAC
AAAATTAAAAACTCGTAAGGGGACCGGGGATCGTGTGACAGGTCGTCGTT
CCAGAGTGGAAATCGAGAACTGTAACAATACTACTGTACGATACTATTAA
TAATCCAGTAGTCATGAATGATATCCCTATCATAACCTGTTAATAGTCCA
TTTTGCGGTAAAAGGCGAAAGAGCAGACGTAATATTGTTATGCAGTATGC
AGTGCTCTCAACTGTACCATATCAGTTAAGCGTAATCGTGCAAGCAACAA
TCGGAAGGAGACGGAACCCCCTGGTCGATTGCTTTGGGTACACGAGAACG
TCGCTAAGGTAACGGCTGTCCTGAGGGTTCAAAATATACTCCGTTGGGGG
CATCGACCCCCTGTCCCCCCCGACCAAAAATTCAGTATACAGTAACGTTG
GCCGTTCTTCTGAGGGGACAGGGTGTGTAAGCATCAACCTCCGTGGCTCT
TTCTTACAACGAGATCGCTAAGGTACGTGGCTGTCCGACATCCGTCCCGA
GACAGTCATTCTTGTGGGACCTGGAGGCTAAGCACTGTGAGGCGATCATT
ACATCGTGATCTTTCAAAAGGTCTCGGACCAAGTCCATGTGGGGAGGGAT
TGCCGCAACGGCGCAGGAGGTCTGGCTACCCCACGGAAACATTTTCATGA
GAGAAACATCCAGGAAGATAATGCCTGCGAAAAAAAACTTTCATTTCGGT
GTGTGCTGTAGGGGAACTTGGTCAAGTTGGTCAAGTTGAATGGCCATGAA
GCCAGTGGATTCTTGTTTTTATCGCGCAAAGCTCTTGCAGTCGGTATCCT
TCTATTAATAGTATCATTTTATTAATAAGTAGTATCCTTTTCAACATGTT
CCAAGGAAAGGGCAGGTAGGAGCTACGAATACGTTCAATACGGCCATAAT
AAATTCGTCCAGGGTCGGATTGACCTTAGCGTAAATGGTCCATTATTAAC
ATTAATGCTAAGTATTTTATTAATAAAGCTACAGTATAATACTTTTGTAT
GCATTTATGTGATTATGTATGTATGTTCCATCACATACCAGTATGTTAAT
AGCAGGGTATGGATCAACAGGATAAGGTTTACAATCCTGCTCGTGGTCAG
CTGAACAGGGAATAATGAATATTTTTCTGTCCCTATTCGCGCCTGAGAAT
CTGGTCTCGTGAGACAGGTTCGGCAGTCCCGTCCTGCGTAAATCTGCTCA
TTTCCATACTCAGCCTGAATGGTGTCTAGTGCTTACTTACGAGATTTCTC
CCGATTTCGGTGGCGGCGTCCATTTTTTTATTTTTTAAACCGCCATACGT
CATCGGGTTAGTCCCGAGTTTATCGGGTCACACGATTGTGTACCGATGGC
GTTCACTGCCGAGAGTGCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGT
TCCAAACGGATGCTGCCTTGGCAGGTCACCATTGACCAATTAGTATGCGC
CTCTCTTTCCCATACCCACTATTGGTATGAAGTGGGCATTTTGGAAGTAT
CGGCGGATAATATCGTTATACGACAAACTCTCAAAGCACATTCTTGTGCT
CCGTCGGTATTGTCGTCGGTATTGTTGATCAGTCTTCTTCCCTCCCAAAC
GACACGCTTATTTGTATGTACATTCTCGCAGTCACACGACTTTTCCCCCG
ATAGGGGCCACGGCGTCACTGGGCGGGATGGATAAATCATTATGGTAGCT
TCCGATACTTGTCTGCATCGCACATATGTCCACAGCAGGATTGGCAACCT
TACACGGTTGATCCATACTCTGCTACATAGTATGACCACACATTAATACT
GCACCAACAGTAAGTATGAGTGGGAAAAGGAGCGCACAAAAAATGGCCCA
TGGTGATACCTGAAAAGGCAGCACCTGTTAGTCGAACTACCTTGAGGACT
GTTGCCGGCGAACTCTCGGCAGTGATCACCATCGGTACGCAATGTGCGAC
CTGATCAACTCTAATCCATCAGTAGGGACTGACCCGACGGAGGTTGAAGG
TATAAATAGACACCGTAGTGGAAAGCGGGAGAAGTCCGACGAGTAAGCAC
CAGATGCAGCCTGAGAGTAGAGAATAAGCATGCTGACGCGGGACGGGACG
GCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCAAACGAGGACAGGG
GAAACATATTTTCCCCTGTTCAGCTGACCATGAGCAGGATTGGCAACCTT
ACCCGGTTGATCCATAACTCTTCTACAGCATAAGTGATGACCCTTACATA
CATACACATATCTATGTATTCGAAGAAGTTTGGAAAAAAAAGTGCGATAC
ATCAAAATAACGCCCATTCAATTTATAACGAGAGAAAATGAAGAGTGTTA
GATTGGTGCTACAGCAAACCAGCGATGCCATGAAATTGGGTTCTCGCGTC
GATCGCGCGTGCCGCCGCCCCGATAGAGTCGTAGACGGCTCTGCGGACGC
CATCCGCGGGTGAGGTGCTTCCACCTTCTGCACTTCAAGCGGACGCTTTA
GCGCCTTCGATCATGGCGCGTAGATTGCCTATGCTCTTGGTTGCTGCATG
ACGTTTTATCGGTGATGAATGCCAAGGGATCTCATGTTGACGATTTTCAA
TATGCTTATCACGCGACCCCCATCACGATCGTCATGAGAAGCCGGTTTAT
GCACGTTGTGACAATCGTCATGCCGATCTCCATGCCGACTGTCAAAATAG
CACTGGTCCTAACTTGCATGGTCGTCACGACGAGTGCCATATATATATAT
TTCCCCTGGATGGTGTCAAGGGAGGACACGGATACACTTTCGAATATATT
AAGGGCTTACATTATTTTCGGGGAAACGAAACAGGGTGAGTGAGGGAGGA
AATAAAAAGGGGTATGGTGCTCATAATGCACCCGAGCAATGGCGTCCCCT
CCCCCTTGCTCTGCCTCGGGCGGTCTTCAATCGCATGCAAGCCCTAACGC
GACTGCTTCAAATTGACAGACGCCCGTCACATGGCCTCCTCGCGCGTTCC
TGTACACTCTCGACTCGAAAGGACGGAGGAAGATGCCGCGTTCAATCGGG
TGGTAAACGCCGGATTCATTTCGTCGGTTGTCCTTTTCGCGATCGTCACC
ATCTTCACTATCGACACGGTAAGCCATAATAGTCGCTCCGAACGGATCGC
CGGTACGCGAAATGCCCCCCTTTTATTTGCCCCCCCTTCCGGCAACTCAC
TTTTGCTTTCCCATGAGTGTAAAGCGAACGAGGCCAGGAGATGGGAGAAA
GGCTTTACCAAGCTTTCGACGACCTCGTTGACCGGGGACTTTGCGGTTTG
TGTTTGGATGAAACGCGGGCAACCAGCGTGTCGATTGACCTCGCCTTGTG
GACTGGGCTTGACGAACGGTCCCCCGTGGCATCTGGAGCTAGAATGTGAC
AATGTGACGTGATGACCGAGCGAGCCCAAGAGACTAAACTTTAAATTAGC
CTCAACGATTGGCCGCGATGACGTCATGTGCTTCGGAAACACGGACGATG
AGTGACGGAACCTTCGCCGCCTTTTATTCCTAGACGGGTGACCGTTCGGC
TTAAACCAGCCCTCACAATCTAGTCGAGAAGGGTAATGCCGAGCGAGACC
TTTCAGCTCTGCTCATCAGGCCAAAGACGACCCGCGCTTACACGAATCAC
GAACGCCGGCGCATTGGCACACCAAAACTCGCAGGAGATTTCACGGGGCT
GGACCGCGGGCGAGGTCATCCTGAGGATCCCCGTAGACAACTGGCTCGCG
TACACGAGCGTGTTACGAGACAATCCCGTGCTGGTGAAGGCTTGTACGAG
CGGGATCGTCTACACCTTGGGCGATTGGACGGCGCAAACATTCGAGGGCA
CAGCCCTGGAGAGTATCAAGAGGGACCGAGTAGCGCGCTCGGCGGTGGCT
GGGCTGCTTCTTCACGGACCGCTCAGTCACGTCTGGTACGACCTGTGCGA
GCGCATGTTCGATTTCATCGACTGGAACGACTTCTGGTGAGTGGCCCTCT
CCACATTACGTTGGACCTACGTTATCTTGTGGAGTCGGGACTGCCTGAGG
AGGCTCTGGAGTGTAACGATGTTTTCGTTACGTTGCCGCGGGGCACTTGG
AAATAGCAAAAGTGAAGGGGGGGCGGGGGGGAATCTTCCCGTGGCGCTTT
CATTCCTAGTTTCACGTCTAGCAGTATTTATGTTAATGCTCCTTCGATGC
AGCTAATGTCATAAGAAGCGATCTCACCTACTCTCGGCGAGAAACAAACA
GGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAGATCCTATGGGGTCCG
TTCTGGAACGCCGTGTACATCTGGTTTGTCGGCACTCTCAAGGGAGACTC
GTTCGAGACTAATCGGGAGGCGGTCGTCACGACAGCCTTACCGCTGGTTA
TTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTCGTCACCTACGGCGTG
TAAGTGCAGGCATGCCACACGGGTGGTGGATGGGATGAAATCGATGATTT
GTGCAGCACAGAGCACGTGCCTCCATTTACACCTTTCCCCGCCGAGGCTG
TTGCTCGTTCGCATATACCCACAACACACTCTAGGTGACGCTGCGTGGTA
ACTTATGCTTTTGACATGTTGAGAGACAAACACCCTCTGGATGAATAATA
GGGGGAAGTTCATCTACGATCCTTCTATCCTCGTGTACACGCACCTCCCT
GTGCTGTCGTAGGATGTTTCATACGTGCTTCTCGCACACGCTTAAATTGG
CCTGGAGAACAGGTTGTGATGATCACTTTCCGCATCAGGCGAGACACTAA
GCTTGACCCCCCCACTCCCATCCCCTTACACGCTGGCGTAGAATACCGAC
CGAGAACCGGCTGTTGTGGGTCGACTTTGTCGAGATAATCTGGGTCACGA
TCCTCAGCAGGCAGGCGGCGGAGCAGGCGCGCGCCAACGACGAGCCGGAT
GGGGAGTCTGCCGCGGCGGGCGAAGTGCAGGAAGAGGCGGGGACGTAGGC
GGAGATGGAGCCGGCGATAAAAAAGAAAACGGCGCTGTAATCGCGTGATT
TGACTAGGCGGACGAAGCGTGTGGTGTAACCATGCGGCCAGGACAGGGCG
AACGCAAAGATCAACCACGATTTTCACACAATACGTGGAGGGAAAGAAAT
GGTTCTACAGTATGCCCCTTTCATTCACTTGCTGGCAACGCCGGGGACGT
CGAACGCCTGTCCGATGGGGCAACGTAGACTGTTGGACAATCGAAGCGGG
TTTTTGAATGCCGCGCGCACATGGTCAAGGGAGGGGCGGTCTGGTCAGCT
GACTGAAGAGCTAAGCGCAGGGAGGGACTTCTCTGGCGCGTGTAGAAGTA
TAACGTCTATATTTTTTCATGTAAGTTGTCGAGAAAGAGGTATATGCCGG
ATTAGGGGGTCGGGGAGTGAAGGAAGAGCCATGGCACGGGCTGCATGACC
GGGATGGGACGCTGGACATATGTGAAATAAAGCCGTTGTGATTGATGTCC
CACCCCAGGGGCGAAGGACCCGCGCGGGAAATGCACTCTGAAACCACGCA
GGCCGGGGATGTGTTATCCCGTATGCCTAACCGGAGGTTGTGATCGACTT
TCGTACCTATTTATTATGTAAAAAATCATGTCACATGTCCAGTTATCTGT
TATTTGAGAGGTTGTGATATCCTTGCGTTGTCCATCTTAGATGTTACAAA
TGAGTGTGCGAAAGAGGTTGTGCCTCGGAATTTCATGTCTTGCTACCCAA
TTCAAGTACACTATTTCGGAGCTGGGTTTTACAGTTACAGTCCGTTTTTA
ATTGTGCGGAGGGGCATTTCAAACGGCTTGCGAATAATTTGCTCACGTGT
ATGTCTATATTTATACTTCGTGTTCGCATAGGGAGCCTGAATTTGTTAAC
GGGGAATCCAAATTTTAATGGTAAGGTAAAAAATTGTAATGGTGAGAAGT
GTTCAAATTCGAGGATATTTGGGGCTGTGGCAATGCCGTCGTTGGCTACA
GCTCGCAGTTTCAGTCATATTTCGGTTCAGAGAAAGGTTGTCGATCGCTT
GCATAGACTATGCCTTTTGTATATGGTGTCAAAAGCTCCTTGCTACCATG
ATCGTCTTTTGATGCATGTTTGAATAGGCTTCACACGATGTTCAGCCTCG
GTGGGTCAGGGATGCATATATGACGTCTTGATGGGGTCGGGCGCACAGCC
CTGCATGGGTTTAACACATATCTTCTTTATCGTTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig105:844079..851513-

>mRNA_F-serratus_M_contig105.527.1 ID=mRNA_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=CDS|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig105:844079..851513- (Fucus serratus male)
ATGTTCGATTTCATCGACTGGAACGACTTCTGATGTTCGATTTCATCGAC
TGGAACGACTTCTGGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAGAT
CCTATGGGGTCCGTTCTGGAACGCCGTGTACATCTGGTTTGTCGGCACTC
TCAAGGGAGACTCGTTCGAGACTAATCGGGAGGCGGTCGTCACGACAGCC
TTACCGCTGGTTATTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTCGT
CACCTACGGCGTGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAGATCC
TATGGGGTCCGTTCTGGAACGCCGTGTACATCTGGTTTGTCGGCACTCTC
AAGGGAGACTCGTTCGAGACTAATCGGGAGGCGGTCGTCACGACAGCCTT
ACCGCTGGTTATTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTCGTCA
CCTACGGCGTAATACCGACCGAGAACCGGCTGTTGTGGGTCGACTTTGTC
GAGATAATCTGGGTCACGATCCTCAGCAGGCAGGCGGCGGAGCAGGCGCG
CGCCAACGACGAGCCGGATGGGGAGTCTGCCGCGGCGGGCGAAGTGCAGG
AAGAGGCGGGGACGTAGAATACCGACCGAGAACCGGCTGTTGTGGGTCGA
CTTTGTCGAGATAATCTGGGTCACGATCCTCAGCAGGCAGGCGGCGGAGC
AGGCGCGCGCCAACGACGAGCCGGATGGGGAGTCTGCCGCGGCGGGCGAA
GTGCAGGAAGAGGCGGGGACGTAG
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