mRNA_F-serratus_M_contig105.527.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.527.1
Unique NamemRNA_F-serratus_M_contig105.527.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 1.040e-113
Identity = 160/250 (64.00%), Postives = 197/250 (78.80%), Query Frame = 1 
Query:   73 PAPSTPNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPD 822
            P P TP+ILWWT++R EE+   N   NAGF++ V LF I  +F +++E+SRGWT GE ILR+P+DNW  Y+ +LR +PV VKACTSGIVY LGD  AQ+ EGT L  I+R RV RSA+AGLLLHGPLSHVWY++CE +FD + WN++WWV APK++ DQ+LWGP WNAVYI F+G L  DS     EA+ +TALPLVIAGIRLWPLAH+VTYG++P ENRLLWVD VEI+WVTILS QAAEQAR+  E +
Sbjct:   91 PKPYTPSILWWTKNREEENKKLNLFANAGFLAGVALFTIAVVFGVNSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQE 340
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA)

HSP 1 Score: 304 bits (779), Expect = 2.130e-94
Identity = 140/253 (55.34%), Postives = 180/253 (71.15%), Query Frame = 1 
Query:   88 PNILWWTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPDGESAAAGE 846
            P +LWW +S  EED   N +VN+GF+ +V++   V + +   + SRGWTA EV+LR+P DNW  Y  +LR +PVLVKA TSG VY LGDWTAQT  GT L  + R RVARSA AG + HGPLSH WY++CE +F  I WN  WWV  PK++ DQ++WGP WNA Y+  VG +K D+     EAV +T +PLV++G++LWP  HLVTYG+IP ENRLLWVD VEI+WVTILS+QAA++A+  D+P     AA E
Sbjct:   43 PKLLWWCKSEMEEDREVNFLVNSGFLIAVIVTVAVRLASSTLDASRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAK-RDQPLSTDTAADE 294
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BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.670e-72
Identity = 119/249 (47.79%), Postives = 159/249 (63.86%), Query Frame = 1 
Query:   61 LSDDPAPSTPNILW-----WTESRTEEDAAFNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792
            LS+  A  TP  L      +  ++  +    N ++N G IS+V    +  + T+D ++ RGWT  E+  RIP+DNW  Y +VL  +PV VKA TSG VYTLGD  AQ +EG  L  I R RVARS +AG + HGPLSH WY + E  F ++ W   WW   PK+ VDQ++W P WN  YI+ +G +K ++       V +T+  L+ +G++LWPLAH+VTYGVIP ENRLLWVD VEI+WVTILSR+AA
Sbjct:   93 LSEHDAADTPRSLQERVRLFAATKGVDSRQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC)

HSP 1 Score: 242 bits (617), Expect = 8.060e-72
Identity = 111/217 (51.15%), Postives = 147/217 (67.74%), Query Frame = 1 
Query:  145 VVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAE 795
            ++N GFI  VV   +  I T+D  ISRGWT+ E+  RIP+D W  Y+ VL ++PV  KA TS  VYT+GD+ AQ  +G A+  + R R+ RS +AGL+ HGPLSH WY++C+  FD +     WW   PKVVVDQ  WGP WN  YI  +G +K +  ET    +  T +PL+++G++LWPLAH VTYG++P ENRLLWVD VEI+WVTIL+  AAE
Sbjct:    1 MINTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA)

HSP 1 Score: 243 bits (621), Expect = 9.420e-71
Identity = 110/218 (50.46%), Postives = 148/218 (67.89%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792
            N  +N G I  V L  +  + T+D ++ RGWTA E + RI +DNW  Y+ +L   P+  KA TS  VY +GD  AQ  EG ++  + R R  RS +AGL+ HGPLSHVWYD+ E +F  + WN+ WW   PKV+VDQ+ WGPFWN +YI  +G +K +S+ET    +  T +PL+++G++LWPLAH VTYG+IP ENRLLWVD VEI WVTIL+ QA+
Sbjct:  107 NETINTGLIVLVALGVLARVGTVDQDMMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQAS 323
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.620e-69
Identity = 107/219 (48.86%), Postives = 148/219 (67.58%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFD-FIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792
            N  +N   + +V++  +  + ++D  ++RGWT  EV  RIP+DNW +Y++VL D P+  KA TS  VYT+GD  AQ  EG ++  + R R+ RS +AGL+ HGPLSH WYD  E  FD  + W + WW   PKV++DQ  WGPFWN  YI  +G +K D +E     +  T +PLV++G++LWPLAH VTYG++P ENRLLWVD VEI+WVTIL+ QA+
Sbjct:   99 NSFINTAVVIAVLVALLSKVASVDAGLTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTE-WWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.210e-67
Identity = 109/235 (46.38%), Postives = 154/235 (65.53%), Query Frame = 1 
Query:  115 RTEEDAAFNRVVNA----GFISSVVLFAIVT-----IFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAA 792
            +T++   F   ++A    GFI++ V+ A++T     + ++D  ++RGWT  E+  RIP+DNW+ Y+S L ++P+  KA TS  VYT+GD  AQ  EG  +  + R R+ RS +AGL+ HGP+SH WY+  E  FD +     WW   PKV +DQ  WGP WN  YI  +G +K DS+E     +  T +PL+++G++LWPLAH VTYG+IP ENRLLWVD VEIIWVTIL+ QA+
Sbjct:   81 QTQQQVGFFSNISAKDINGFINTAVVVAVLTALVFKVTSVDAGLTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQAS 315
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA)

HSP 1 Score: 233 bits (594), Expect = 3.660e-67
Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 1 
Query:  136 FNRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMF-DFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAE 795
            +N  +N G I+ V + A+  + T+D  + RGWTA E+ +RIPVDNW +Y S+L   P+  KA TS  VYT+GD  AQ  EG +   + R RV RS +AG + HGPLSHVWYD  E +F +   W + WW   PKV +DQ+ WGPFWN  YI  +G ++    +     +  T +PL+++G++LWPLAH VTYG++P ENRLLWVD VEI+WVTIL+  AAE
Sbjct:   87 YNAYINIGVIAIVTVLALSKLATVDMGMMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE 306
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A8J5X504_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X504_DIALT)

HSP 1 Score: 229 bits (584), Expect = 1.350e-65
Identity = 107/225 (47.56%), Postives = 143/225 (63.56%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARAND 813
            N  +N   ++ VVL  +V + T+D EISRGWT  E++ R+P DNW  YTS L  +PVL KA TSG VY LGD  AQ+ EG  L  + R R  RS++ G  LHGPLSH+WY   ER+FD + W   W+    K++ DQ+ WG  WNA+YI  +G   G +  T +  +  T  PL+  G++LW  AH++TYGV+P ENRLLWVD VEI+WV ILS  A+   +A +
Sbjct:  104 NAALNFAGLAVVVLAVVVKLLTVDAEISRGWTWFEIVSRLPSDNWSDYTSFLTASPVLTKAITSGTVYALGDILAQSTEGKGLADLDRVRTVRSSLCGFTLHGPLSHLWYIFAERLFDLLHWGA-WYFVPLKILTDQLTWGALWNALYIAAIGLTSGRALPTIQGEIKETVFPLIRDGLKLWCPAHMITYGVVPIENRLLWVDLVEILWVVILSTTASASKQARE 327
[Close]
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA)

HSP 1 Score: 228 bits (580), Expect = 5.770e-65
Identity = 100/229 (43.67%), Postives = 145/229 (63.32%), Query Frame = 1 
Query:  139 NRVVNAGFISSVVLFAIVTIFTIDTEISRGWTAGEVILRIPVDNWLAYTSVLRDNPVLVKACTSGIVYTLGDWTAQTFEGTALESIKRDRVARSAVAGLLLHGPLSHVWYDLCERMFD-FIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNREAVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSRQAAEQARANDEPD 822
            N ++N    +  ++  +  + +++  I RGW+  E+  R+P+DNW +Y ++L   P+  K+ TS  VY +GD  AQ  EGT +  + R R+ RS  AGL+ HGPLSH WY + E  F+  + W D WW   PKVV+DQ LWGPFWN  YI  +G ++          +  T +PLV++G++LWPLAH +TYG++P ENRLLWVD VEI+WVTIL+ QAA    +N+ P+
Sbjct:  104 NTIINTSIFAIALVTVVFQVLSVNVGIIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTD-WWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAAGSVESNEAPE 331
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX44_9PHAE1.040e-11364.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8Z2_9STRA2.130e-9455.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TQH1_9STRA1.670e-7247.79Peroxisomal membrane 22 kDa (Mpv17 pmp22) family p... [more]
B7G9T7_PHATC8.060e-7251.15Predicted protein (Fragment) n=3 Tax=Phaeodactylum... [more]
A0A7S1VV68_9STRA9.420e-7150.46Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2HYH1_9STRA5.620e-6948.86Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6V2I5L6_9STRA1.210e-6746.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2PLY5_9STRA3.660e-6748.87Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8J5X504_DIALT1.350e-6547.56Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2LHE2_9STRA5.770e-6543.67Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:844079..851513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.2
Seed ortholog evalue1.6e-40
Seed eggNOG ortholog2880.D7G2C4
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0016020,GO:0016021,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-16_001670.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size2107
Cds size387
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928879.7456017-UTR-F-serratus_M_contig105:844078..8453151622928879.7456017-UTR-F-serratus_M_contig105:844078..845315Fucus serratus maleUTRF-serratus_M_contig105 844079..845315 -
1690962612.680618-UTR-F-serratus_M_contig105:844078..8453151690962612.680618-UTR-F-serratus_M_contig105:844078..845315Fucus serratus maleUTRF-serratus_M_contig105 844079..845315 -
1622928879.8285842-UTR-F-serratus_M_contig105:846359..8466291622928879.8285842-UTR-F-serratus_M_contig105:846359..846629Fucus serratus maleUTRF-serratus_M_contig105 846360..846629 -
1690962612.737371-UTR-F-serratus_M_contig105:846359..8466291690962612.737371-UTR-F-serratus_M_contig105:846359..846629Fucus serratus maleUTRF-serratus_M_contig105 846360..846629 -
1622928879.8422296-UTR-F-serratus_M_contig105:847195..8472921622928879.8422296-UTR-F-serratus_M_contig105:847195..847292Fucus serratus maleUTRF-serratus_M_contig105 847196..847292 -
1690962612.7495408-UTR-F-serratus_M_contig105:847195..8472921690962612.7495408-UTR-F-serratus_M_contig105:847195..847292Fucus serratus maleUTRF-serratus_M_contig105 847196..847292 -
1622928879.8588183-UTR-F-serratus_M_contig105:851397..8515131622928879.8588183-UTR-F-serratus_M_contig105:851397..851513Fucus serratus maleUTRF-serratus_M_contig105 851398..851513 -
1690962612.7575278-UTR-F-serratus_M_contig105:851397..8515131690962612.7575278-UTR-F-serratus_M_contig105:851397..851513Fucus serratus maleUTRF-serratus_M_contig105 851398..851513 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928879.7837567-CDS-F-serratus_M_contig105:845315..8454721622928879.7837567-CDS-F-serratus_M_contig105:845315..845472Fucus serratus maleCDSF-serratus_M_contig105 845316..845472 -
1690962612.6928704-CDS-F-serratus_M_contig105:845315..8454721690962612.6928704-CDS-F-serratus_M_contig105:845315..845472Fucus serratus maleCDSF-serratus_M_contig105 845316..845472 -
1622928879.8024628-CDS-F-serratus_M_contig105:845864..8460621622928879.8024628-CDS-F-serratus_M_contig105:845864..846062Fucus serratus maleCDSF-serratus_M_contig105 845865..846062 -
1690962612.7043843-CDS-F-serratus_M_contig105:845864..8460621690962612.7043843-CDS-F-serratus_M_contig105:845864..846062Fucus serratus maleCDSF-serratus_M_contig105 845865..846062 -
1622928879.8165538-CDS-F-serratus_M_contig105:846327..8463591622928879.8165538-CDS-F-serratus_M_contig105:846327..846359Fucus serratus maleCDSF-serratus_M_contig105 846328..846359 -
1690962612.7185366-CDS-F-serratus_M_contig105:846327..8463591690962612.7185366-CDS-F-serratus_M_contig105:846327..846359Fucus serratus maleCDSF-serratus_M_contig105 846328..846359 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.527.1prot_F-serratus_M_contig105.527.1Fucus serratus malepolypeptideF-serratus_M_contig105 845316..846359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.527.1

>prot_F-serratus_M_contig105.527.1 ID=prot_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MFDFIDWNDFWWVAAPKVVVDQILWGPFWNAVYIWFVGTLKGDSFETNRE
AVVTTALPLVIAGIRLWPLAHLVTYGVIPTENRLLWVDFVEIIWVTILSR
QAAEQARANDEPDGESAAAGEVQEEAGT*
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mRNA from alignment at F-serratus_M_contig105:844079..851513-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.527.1 ID=mRNA_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=mRNA|length=7435bp|location=Sequence derived from alignment at F-serratus_M_contig105:844079..851513- (Fucus serratus male)
GAGGCGGACGAGTTCCCCAAGGCCAACAACGGAAGCTCACCACATGAAGA
GGACGGCGCCCTTTCAGACGATCCTGCACCCTCCACACCGAACATTCTGT
GGTGGACAGAGAGCAGGTGATATTTTCCCGCCCTCGTTCGGTCCGGTTTC
CGTCGTTTTGTCGAACGACTATATATAATACTATTTTTTGGTTTGACATT
ACGTCTACCGTCCCTGGTGTTATCCCGTCGAGAGCTCGGGCAGCCTCAGG
ATTGCGCGACGGGATCAATTTTATTGTAAAGACTTGAAATCCCCTCGCAA
AATTATCGAATGCAAGGCCCTCGTCGCCCGAGTGGTCTATAAATAGTAGA
TAACCACGTACACCTGCTATTAAGAGTGCAGAAGTCGTGAGATCGATTCT
TGTCAAAATAATTCTGGCGTCCGTACCGGAACGCGTAGGTACTAATAGTA
AGTAAAATTCAATAACCATTGGTTGACAAGTTGTAAGAGTGTTGAACTTG
CATCGCGATGAAAATTCGTAAGGCGTGAACCGGGGAGAGATGGGAAGATC
CTTAGTGAGCTCAGGCAGGATGGCTATGTTTAGGTCCAACGGCTACAAGT
GAGGAGCCATGCTGGCATTGGTGCGCTTTATCGTAGGGGTGCGTTGAGTT
AGCTGTGGTCGGTAAGATCGCTACCTAGCGATCGATCGATCGATAAAATA
AAAATAAATAAAAATGGCCCAGATTATAATTTTTCCTTGAGGGCGTTCGC
CGTTCCTAATTTTGTGTTCCAGATCGCCGAGGAATGCCCCCCCCCCGGCA
AAATCCCCGATCGCACTCCACCAACCTTGCAGCTCATTAGGCAGGGATGC
GAAGGAAATGAACCTCGAAATTCGATCGCCGTGGCCTCCAAGTAGCTTTA
GTAACTCTGATTGACAATATCATCCTTAGGGTATCCTCAGGGCAAACGGC
AAGCTCCAAGCGTTTGAGCATGGCGGTTTCAAAGGGCAAGGTACACGGCC
TCGAAGAACAAATAGATACCTGGTAGTCATCCCCAAACCTTAGTGTGGTC
TACAGTTACTGTAATTAGTCCAAGGTGTTTTTTTGACCTCGCCATAGGTA
CCAGTATAATTCTATTTTATAAGTTCACAGTACTGTAGAACAGCGGAAAC
GCGCGGACGTTTTGGTTGCAGATACGAGCATAGCTGTGTTTCCTCCGTAC
AAAATTAAAAACTCGTAAGGGGACCGGGGATCGTGTGACAGGTCGTCGTT
CCAGAGTGGAAATCGAGAACTGTAACAATACTACTGTACGATACTATTAA
TAATCCAGTAGTCATGAATGATATCCCTATCATAACCTGTTAATAGTCCA
TTTTGCGGTAAAAGGCGAAAGAGCAGACGTAATATTGTTATGCAGTATGC
AGTGCTCTCAACTGTACCATATCAGTTAAGCGTAATCGTGCAAGCAACAA
TCGGAAGGAGACGGAACCCCCTGGTCGATTGCTTTGGGTACACGAGAACG
TCGCTAAGGTAACGGCTGTCCTGAGGGTTCAAAATATACTCCGTTGGGGG
CATCGACCCCCTGTCCCCCCCGACCAAAAATTCAGTATACAGTAACGTTG
GCCGTTCTTCTGAGGGGACAGGGTGTGTAAGCATCAACCTCCGTGGCTCT
TTCTTACAACGAGATCGCTAAGGTACGTGGCTGTCCGACATCCGTCCCGA
GACAGTCATTCTTGTGGGACCTGGAGGCTAAGCACTGTGAGGCGATCATT
ACATCGTGATCTTTCAAAAGGTCTCGGACCAAGTCCATGTGGGGAGGGAT
TGCCGCAACGGCGCAGGAGGTCTGGCTACCCCACGGAAACATTTTCATGA
GAGAAACATCCAGGAAGATAATGCCTGCGAAAAAAAACTTTCATTTCGGT
GTGTGCTGTAGGGGAACTTGGTCAAGTTGGTCAAGTTGAATGGCCATGAA
GCCAGTGGATTCTTGTTTTTATCGCGCAAAGCTCTTGCAGTCGGTATCCT
TCTATTAATAGTATCATTTTATTAATAAGTAGTATCCTTTTCAACATGTT
CCAAGGAAAGGGCAGGTAGGAGCTACGAATACGTTCAATACGGCCATAAT
AAATTCGTCCAGGGTCGGATTGACCTTAGCGTAAATGGTCCATTATTAAC
ATTAATGCTAAGTATTTTATTAATAAAGCTACAGTATAATACTTTTGTAT
GCATTTATGTGATTATGTATGTATGTTCCATCACATACCAGTATGTTAAT
AGCAGGGTATGGATCAACAGGATAAGGTTTACAATCCTGCTCGTGGTCAG
CTGAACAGGGAATAATGAATATTTTTCTGTCCCTATTCGCGCCTGAGAAT
CTGGTCTCGTGAGACAGGTTCGGCAGTCCCGTCCTGCGTAAATCTGCTCA
TTTCCATACTCAGCCTGAATGGTGTCTAGTGCTTACTTACGAGATTTCTC
CCGATTTCGGTGGCGGCGTCCATTTTTTTATTTTTTAAACCGCCATACGT
CATCGGGTTAGTCCCGAGTTTATCGGGTCACACGATTGTGTACCGATGGC
GTTCACTGCCGAGAGTGCGCCGGCACAGGGCCAGTAAACCTCAAGGTAGT
TCCAAACGGATGCTGCCTTGGCAGGTCACCATTGACCAATTAGTATGCGC
CTCTCTTTCCCATACCCACTATTGGTATGAAGTGGGCATTTTGGAAGTAT
CGGCGGATAATATCGTTATACGACAAACTCTCAAAGCACATTCTTGTGCT
CCGTCGGTATTGTCGTCGGTATTGTTGATCAGTCTTCTTCCCTCCCAAAC
GACACGCTTATTTGTATGTACATTCTCGCAGTCACACGACTTTTCCCCCG
ATAGGGGCCACGGCGTCACTGGGCGGGATGGATAAATCATTATGGTAGCT
TCCGATACTTGTCTGCATCGCACATATGTCCACAGCAGGATTGGCAACCT
TACACGGTTGATCCATACTCTGCTACATAGTATGACCACACATTAATACT
GCACCAACAGTAAGTATGAGTGGGAAAAGGAGCGCACAAAAAATGGCCCA
TGGTGATACCTGAAAAGGCAGCACCTGTTAGTCGAACTACCTTGAGGACT
GTTGCCGGCGAACTCTCGGCAGTGATCACCATCGGTACGCAATGTGCGAC
CTGATCAACTCTAATCCATCAGTAGGGACTGACCCGACGGAGGTTGAAGG
TATAAATAGACACCGTAGTGGAAAGCGGGAGAAGTCCGACGAGTAAGCAC
CAGATGCAGCCTGAGAGTAGAGAATAAGCATGCTGACGCGGGACGGGACG
GCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCAAACGAGGACAGGG
GAAACATATTTTCCCCTGTTCAGCTGACCATGAGCAGGATTGGCAACCTT
ACCCGGTTGATCCATAACTCTTCTACAGCATAAGTGATGACCCTTACATA
CATACACATATCTATGTATTCGAAGAAGTTTGGAAAAAAAAGTGCGATAC
ATCAAAATAACGCCCATTCAATTTATAACGAGAGAAAATGAAGAGTGTTA
GATTGGTGCTACAGCAAACCAGCGATGCCATGAAATTGGGTTCTCGCGTC
GATCGCGCGTGCCGCCGCCCCGATAGAGTCGTAGACGGCTCTGCGGACGC
CATCCGCGGGTGAGGTGCTTCCACCTTCTGCACTTCAAGCGGACGCTTTA
GCGCCTTCGATCATGGCGCGTAGATTGCCTATGCTCTTGGTTGCTGCATG
ACGTTTTATCGGTGATGAATGCCAAGGGATCTCATGTTGACGATTTTCAA
TATGCTTATCACGCGACCCCCATCACGATCGTCATGAGAAGCCGGTTTAT
GCACGTTGTGACAATCGTCATGCCGATCTCCATGCCGACTGTCAAAATAG
CACTGGTCCTAACTTGCATGGTCGTCACGACGAGTGCCATATATATATAT
TTCCCCTGGATGGTGTCAAGGGAGGACACGGATACACTTTCGAATATATT
AAGGGCTTACATTATTTTCGGGGAAACGAAACAGGGTGAGTGAGGGAGGA
AATAAAAAGGGGTATGGTGCTCATAATGCACCCGAGCAATGGCGTCCCCT
CCCCCTTGCTCTGCCTCGGGCGGTCTTCAATCGCATGCAAGCCCTAACGC
GACTGCTTCAAATTGACAGACGCCCGTCACATGGCCTCCTCGCGCGTTCC
TGTACACTCTCGACTCGAAAGGACGGAGGAAGATGCCGCGTTCAATCGGG
TGGTAAACGCCGGATTCATTTCGTCGGTTGTCCTTTTCGCGATCGTCACC
ATCTTCACTATCGACACGGTAAGCCATAATAGTCGCTCCGAACGGATCGC
CGGTACGCGAAATGCCCCCCTTTTATTTGCCCCCCCTTCCGGCAACTCAC
TTTTGCTTTCCCATGAGTGTAAAGCGAACGAGGCCAGGAGATGGGAGAAA
GGCTTTACCAAGCTTTCGACGACCTCGTTGACCGGGGACTTTGCGGTTTG
TGTTTGGATGAAACGCGGGCAACCAGCGTGTCGATTGACCTCGCCTTGTG
GACTGGGCTTGACGAACGGTCCCCCGTGGCATCTGGAGCTAGAATGTGAC
AATGTGACGTGATGACCGAGCGAGCCCAAGAGACTAAACTTTAAATTAGC
CTCAACGATTGGCCGCGATGACGTCATGTGCTTCGGAAACACGGACGATG
AGTGACGGAACCTTCGCCGCCTTTTATTCCTAGACGGGTGACCGTTCGGC
TTAAACCAGCCCTCACAATCTAGTCGAGAAGGGTAATGCCGAGCGAGACC
TTTCAGCTCTGCTCATCAGGCCAAAGACGACCCGCGCTTACACGAATCAC
GAACGCCGGCGCATTGGCACACCAAAACTCGCAGGAGATTTCACGGGGCT
GGACCGCGGGCGAGGTCATCCTGAGGATCCCCGTAGACAACTGGCTCGCG
TACACGAGCGTGTTACGAGACAATCCCGTGCTGGTGAAGGCTTGTACGAG
CGGGATCGTCTACACCTTGGGCGATTGGACGGCGCAAACATTCGAGGGCA
CAGCCCTGGAGAGTATCAAGAGGGACCGAGTAGCGCGCTCGGCGGTGGCT
GGGCTGCTTCTTCACGGACCGCTCAGTCACGTCTGGTACGACCTGTGCGA
GCGCATGTTCGATTTCATCGACTGGAACGACTTCTGGTGAGTGGCCCTCT
CCACATTACGTTGGACCTACGTTATCTTGTGGAGTCGGGACTGCCTGAGG
AGGCTCTGGAGTGTAACGATGTTTTCGTTACGTTGCCGCGGGGCACTTGG
AAATAGCAAAAGTGAAGGGGGGGCGGGGGGGAATCTTCCCGTGGCGCTTT
CATTCCTAGTTTCACGTCTAGCAGTATTTATGTTAATGCTCCTTCGATGC
AGCTAATGTCATAAGAAGCGATCTCACCTACTCTCGGCGAGAAACAAACA
GGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAGATCCTATGGGGTCCG
TTCTGGAACGCCGTGTACATCTGGTTTGTCGGCACTCTCAAGGGAGACTC
GTTCGAGACTAATCGGGAGGCGGTCGTCACGACAGCCTTACCGCTGGTTA
TTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTCGTCACCTACGGCGTG
TAAGTGCAGGCATGCCACACGGGTGGTGGATGGGATGAAATCGATGATTT
GTGCAGCACAGAGCACGTGCCTCCATTTACACCTTTCCCCGCCGAGGCTG
TTGCTCGTTCGCATATACCCACAACACACTCTAGGTGACGCTGCGTGGTA
ACTTATGCTTTTGACATGTTGAGAGACAAACACCCTCTGGATGAATAATA
GGGGGAAGTTCATCTACGATCCTTCTATCCTCGTGTACACGCACCTCCCT
GTGCTGTCGTAGGATGTTTCATACGTGCTTCTCGCACACGCTTAAATTGG
CCTGGAGAACAGGTTGTGATGATCACTTTCCGCATCAGGCGAGACACTAA
GCTTGACCCCCCCACTCCCATCCCCTTACACGCTGGCGTAGAATACCGAC
CGAGAACCGGCTGTTGTGGGTCGACTTTGTCGAGATAATCTGGGTCACGA
TCCTCAGCAGGCAGGCGGCGGAGCAGGCGCGCGCCAACGACGAGCCGGAT
GGGGAGTCTGCCGCGGCGGGCGAAGTGCAGGAAGAGGCGGGGACGTAGGC
GGAGATGGAGCCGGCGATAAAAAAGAAAACGGCGCTGTAATCGCGTGATT
TGACTAGGCGGACGAAGCGTGTGGTGTAACCATGCGGCCAGGACAGGGCG
AACGCAAAGATCAACCACGATTTTCACACAATACGTGGAGGGAAAGAAAT
GGTTCTACAGTATGCCCCTTTCATTCACTTGCTGGCAACGCCGGGGACGT
CGAACGCCTGTCCGATGGGGCAACGTAGACTGTTGGACAATCGAAGCGGG
TTTTTGAATGCCGCGCGCACATGGTCAAGGGAGGGGCGGTCTGGTCAGCT
GACTGAAGAGCTAAGCGCAGGGAGGGACTTCTCTGGCGCGTGTAGAAGTA
TAACGTCTATATTTTTTCATGTAAGTTGTCGAGAAAGAGGTATATGCCGG
ATTAGGGGGTCGGGGAGTGAAGGAAGAGCCATGGCACGGGCTGCATGACC
GGGATGGGACGCTGGACATATGTGAAATAAAGCCGTTGTGATTGATGTCC
CACCCCAGGGGCGAAGGACCCGCGCGGGAAATGCACTCTGAAACCACGCA
GGCCGGGGATGTGTTATCCCGTATGCCTAACCGGAGGTTGTGATCGACTT
TCGTACCTATTTATTATGTAAAAAATCATGTCACATGTCCAGTTATCTGT
TATTTGAGAGGTTGTGATATCCTTGCGTTGTCCATCTTAGATGTTACAAA
TGAGTGTGCGAAAGAGGTTGTGCCTCGGAATTTCATGTCTTGCTACCCAA
TTCAAGTACACTATTTCGGAGCTGGGTTTTACAGTTACAGTCCGTTTTTA
ATTGTGCGGAGGGGCATTTCAAACGGCTTGCGAATAATTTGCTCACGTGT
ATGTCTATATTTATACTTCGTGTTCGCATAGGGAGCCTGAATTTGTTAAC
GGGGAATCCAAATTTTAATGGTAAGGTAAAAAATTGTAATGGTGAGAAGT
GTTCAAATTCGAGGATATTTGGGGCTGTGGCAATGCCGTCGTTGGCTACA
GCTCGCAGTTTCAGTCATATTTCGGTTCAGAGAAAGGTTGTCGATCGCTT
GCATAGACTATGCCTTTTGTATATGGTGTCAAAAGCTCCTTGCTACCATG
ATCGTCTTTTGATGCATGTTTGAATAGGCTTCACACGATGTTCAGCCTCG
GTGGGTCAGGGATGCATATATGACGTCTTGATGGGGTCGGGCGCACAGCC
CTGCATGGGTTTAACACATATCTTCTTTATCGTTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig105:844079..851513-

>mRNA_F-serratus_M_contig105.527.1 ID=mRNA_F-serratus_M_contig105.527.1|Name=mRNA_F-serratus_M_contig105.527.1|organism=Fucus serratus male|type=CDS|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig105:844079..851513- (Fucus serratus male)
ATGTTCGATTTCATCGACTGGAACGACTTCTGATGTTCGATTTCATCGAC
TGGAACGACTTCTGGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAGAT
CCTATGGGGTCCGTTCTGGAACGCCGTGTACATCTGGTTTGTCGGCACTC
TCAAGGGAGACTCGTTCGAGACTAATCGGGAGGCGGTCGTCACGACAGCC
TTACCGCTGGTTATTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTCGT
CACCTACGGCGTGTGGGTTGCTGCGCCCAAGGTTGTCGTCGACCAGATCC
TATGGGGTCCGTTCTGGAACGCCGTGTACATCTGGTTTGTCGGCACTCTC
AAGGGAGACTCGTTCGAGACTAATCGGGAGGCGGTCGTCACGACAGCCTT
ACCGCTGGTTATTGCGGGAATTCGTTTGTGGCCCTTGGCACACCTCGTCA
CCTACGGCGTAATACCGACCGAGAACCGGCTGTTGTGGGTCGACTTTGTC
GAGATAATCTGGGTCACGATCCTCAGCAGGCAGGCGGCGGAGCAGGCGCG
CGCCAACGACGAGCCGGATGGGGAGTCTGCCGCGGCGGGCGAAGTGCAGG
AAGAGGCGGGGACGTAGAATACCGACCGAGAACCGGCTGTTGTGGGTCGA
CTTTGTCGAGATAATCTGGGTCACGATCCTCAGCAGGCAGGCGGCGGAGC
AGGCGCGCGCCAACGACGAGCCGGATGGGGAGTCTGCCGCGGCGGGCGAA
GTGCAGGAAGAGGCGGGGACGTAG
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