mRNA_F-serratus_M_contig105.526.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.526.1 vs. uniprot
Match: A0A067CP73_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CP73_SAPPC) HSP 1 Score: 167 bits (422), Expect = 8.420e-37 Identity = 167/665 (25.11%), Postives = 288/665 (43.31%), Query Frame = 2 Query: 13544 LWVVDSLGRRYLAVASVSLQRATVFLTISASGQFPPFRIENRSSAETLAYRQVDAHKTMGWHVLPPLSWHAFLWQEPDKPRAIEVAFSGTVTRSNYNARYSQEYSMDKIGDREPLEEDSITRTMLALVATGTRSKRLLSEVRVEGRTRVLSFGDVPLLDGHAQGAHADSLTRFKRLYTQLDVGVRFAGVSFNIVECSSEGPSEVTSVHVDSLTVAKRSGGNLVEVQVFHVQVDDMRRRTRMPVVLQPTNSGFNSHLRGGG----GENVVFQGGAGVATPIPFLRILYESEVATMSMPHLKSLDRNRPRPPSVDVIQQEMRTHIDLEFVLHVLGLAGTLV--PELTSEEVLARMCRNKAKVAVRHTVPTPAKRDLSMVYVECFRHSSIVVRVELLVGPGALSPDAMALEDPEATTGGLTVLGGSSLTILSVLGSSLAHVSPTFVFDQLVVTHYCGSLRGLTG--LVQTALTQQAVAQGYKVLGSMELLGDPLSLVSKFGESVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIFIEDETETGDGQRQSEVKDLEHGVKEGGKVFYESMKAGLAGLIDRPKEGANEEGFAGFIAGMAKGIXXXXXXXXXXXXXXXARVTEGVDASTRLSDEKSM-GRRRAAR 15511 +W+ L + V + F+T+ + P RIENRS+ + Y Q+ K VLPP SWH++ W D P +V V S R M + E L D L EV ++G TRVL+ GD P+ H D T + + + V G+ IV+ E P E+ ++ ++ L + + + ++ H+Q+DDM T P+ L P +SGFNSH R G GE+ P+L ++ +S D + + + ++L++ LHVL + +L+ P+ E VLA + + +A R P P+ +M EC S+ V+++ DP+A L L G+ T S+LG +AHV+P F L + L ++ +L + Q YKV+GS+EL+GDP+ L+++ + + +TK + G+++ G GA +L++ LVG + K ++++ + + E++ + E + + G+ +GG + +S+ G++GL+ +P +GA ++GF GF G+ +G ++++ V +T L D+K G RR AR Sbjct: 2009 MWLRGPLSDAPIVELDVQPDGLSTFVTLRDRTRNPELRIENRSTQYAIRYAQLGV-KHAEEIVLPPRSWHSYAW---DMPIGKDVRLKVYVGSS----RVPVLVEMQSVHRLERLTPDD-------------GHVYLHGEVYIDGITRVLAVGDGPVY-------HHDRRTLVPDVLFDMALEVGLHGLGVTIVD---ESPREIMNITMEGLRMLSPAHSHKTTYELHHMQLDDMTPHTMYPIFLAPIDSGFNSHKREGWRAEHGEH-------------PWLHVVIDSYY-----------DGDMLIVDELSATIGSLALKVNLDYALHVLDIIYSLLWPPQTHDEMVLAGVTASSELLAHRVIWPDPSTLGQNMYVREC-SFSAYVLQL-------------FFNSDPDAANSYLLSLLGN--TAGSILGG-IAHVTPEFAIHPLRMADKFVYKDDLIYNIILWDSLIGNMLGQWYKVVGSLELMGDPVGLLNEITDGLALAARQTKRDFKGESDKKGQGAVILMQTLVGAPSDAIGKAANGFGDILKKAT----YFENQ------EADHEPRHVPEGLLQGGVLLGKSLVNGVSGLVTKPMQGAKDDGFKGFAKGVGQGTLGLVASPLIGTLGVIEKLSQSVHNTTHLMDDKDYDGTRRIAR 2591
BLAST of mRNA_F-serratus_M_contig105.526.1 vs. uniprot
Match: A0A3M6VBT6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBT6_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.890e-36 Identity = 163/639 (25.51%), Postives = 282/639 (44.13%), Query Frame = 2 Query: 13532 GETHLWVVDSLGRRYLAV-ASVSLQRATVFLTISASGQFPPFRIENRSSAETLAYRQVDAHKTMGWH------VLPPLSWHAFLWQEP-DKPRAIEVAFSGTVTRSNYNARYSQEYSMDKIGDREPLEEDSITRTM-LALVATGTRSKRLLSEVRVEGRTRVLSFGDVPL---LDGHAQGAHADSLTRFKRLYTQLDVGVRFAGVSFNIVECSSEGPSEVTSVHVDSLTVAKRSGGNLVEVQVFHVQVDDMRRRTRMPVVLQPTNSGFNSHLRGGGGENVVFQGGAGVATPIPFLRILYESEVATMSMPHLKSLDRNRPRPPSVDVIQQEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLA-RMCRNKAKVAVRHTVPTPAKR-------DLSMVYVECFRHSSIVVRVELLVGPGALSPDAMALEDPEATTGGLTVLGGSSLTILSVLGSSLAHVSPTFVFDQLVVTHYCGSLRGLTGLVQTALTQQAVAQGYKVLGSMELLGDPLSLVSKFGESVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIFIEDETETGDGQRQSEVKDLEHGVKEGGKVFYESMKAGLAGLIDRPKEGANEEGFAGFIAGMAKGI 15388 G+ +L V S+ +R+L ASV + V++ ++ PP+RIEN + T+ Y Q+ + P +WHAF W P K R +E+ S +++Y +D +G +P+ TM ++ + L +V V+ TRV+ + L L + D L + LY + F G F++++ P EV VD + V K V H Q D+M + PV++ P N+G++ G P PFL+++ +++ L+ ++ ++ +D+++ ++++ L L P L S+ + R R K R P P + +VY + R SS+ + +E + D ++ +T GG +V+ G I+ ++GS+L+ SPTF F ++V+ + + L + QQ + Q Y+++GS +++G+P+ LV G VV+F TK E+TG A T G G KVL K +V S AKITGSL++ + S +++ +T G S ++ GVK F + + G G+ +P EGA + G G + +GI Sbjct: 1911 GDVYLQVYSSVRQRHLICQASVQVVDMYVYVVLTDVSCAPPYRIENYTPF-TVDYAQLGESSIFSRGQKQTAATIKPGAWHAFAWFNPLSKDRHVELRLSHVDAPK----AQTKKYDIDYVGYLDPI-------TMWVSRDGEKKHAVELTVQVVVDESTRVVKIAEKELELSLLVNQDLEEEDDLQHRRMLYVS-SFDIAFEGFGFSLLDGF---PQEVFFASVDVIKVQKAPSSLEWTFSVLHCQADNMLATAKFPVIMNPVNAGYSDKSVG--------------KEPQPFLKLVLDAD-----------LEARLGTYKLLEFSLGDLAVKVDIDYFVNLVKL---LEPYLVSDATMTHRSRRTLEKTLQRRAPPMPVMLVTNDGGIETDLVYFDVLRISSLSIDIEYSI----TRKDIVS-----STGGGHSVVFGFLSQIVGLVGSNLSG-SPTFNFSEIVIVRCLSTKQRLQNQLVANYVQQGIMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGGAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEFSD-----DNKGDTSGGDDSSSSDNV--GVK-----FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQXTVQGI 2483
BLAST of mRNA_F-serratus_M_contig105.526.1 vs. uniprot
Match: T0PMD4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PMD4_SAPDV) HSP 1 Score: 164 bits (416), Expect = 4.210e-36 Identity = 171/672 (25.45%), Postives = 287/672 (42.71%), Query Frame = 2 Query: 13526 EMGETHLWVVDSLGRRYLAVASVSLQRATVFLTISASGQFPPFRIENRSSAETLAYRQVDAHKTMGWHVLPPLSWHAFLWQEPDKPRAIEVAFSGTVTRSNYNARYSQEYSMDKIGDREPLEEDSITRTMLALVATGTRSKRLLSEVRVEGRTRVLSFGDVPLLDGHAQGAHADSLTRFKRLYTQLDVGVRFAGVSFNIVECSSEGPSEVTSVHVDSLTVAKRSGGNLVEVQVFHVQVDDMRRRTRMPVVLQPTNSGFNSHLRGGG----GENVVFQGGAGVATPIPFLRILYESEVATMSMPHLKSLDRNRPRPPSVDVIQQEMRTHIDLEFVLHVLGLAGTLV-PELTSEEVLARMCRNKAKV-AVRHTVPTPAKRDLSMVYVECFRHSSIVVRVELLVGPGALSPDAMALEDPEATTGGLTVLGGSSLTILSVLGSSLAHVSPTFVFDQLVVTH---YCGSLRGLTGLVQTALTQQAVAQGYKVLGSMELLGDPLSLVSKFGESVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIFIEDETETGDGQRQSEVKDLEHGVKEGGKVFYESMKAGLAGLIDRPKEGANEEGFAGFIAGMAKGIXXXXXXXXXXXXXXXARVTEGVDASTRLSDEKSM-GRRRAAR 15511 E +W+ L + V + F+T+ + P RIENRS+ + Y Q+ K VLPP SWH++ W D P +V V S R M + E L D L EV ++G TRVL+ GD P+ H D T + + V G+ IV+ + P E+ ++ ++ L + + + ++ H+Q+DDM T P+ L P +SGFNSH R G GE+ P+L ++ +S D + + + I+L++ LHVL + +L P T +EV+A A++ A R P P+ +M YV SS V+++ + DP+A L L G+ T S+LG +AHV+P F L++ Y L ++ L + Q YKV+GS+EL+GDP+ L ++ + + +TK + G+++ G GA +L++ LVG + K ++++ T + + + E + + G+ +GG + +S+ G++GL+ +P +GA ++GF GF G+ +G ++++ V +T L D+K G RR AR Sbjct: 2002 EKSVASMWLRGPLSDAPIVELDVQPDGLSTFVTLRDRTRTPELRIENRSTQYAIRYAQLGV-KHAEEIVLPPRSWHSYAW---DMPIGKDVRLKVFVGSS----RVPVLVEMQSVHRLERLTPDD-------------GHIYLHGEVYIDGTTRVLAVGDGPVY-------HHDRRTLVPDAMFAMALEVGLHGLGVTIVD---QTPREIMNITMEGLRMLSPAHSHSTTYELHHLQLDDMTPHTMYPIFLAPIDSGFNSHKREGWRAEHGEH-------------PWLHLVIDSYY-----------DGDMLIVDELSACIGSLALKINLDYALHVLDIFYSLFWPPQTYDEVVAAGIAAAAELLAHRVAWPDPSTLGQNM-YVRACTVSSYVLQL-------------VFNSDPDAADSYLLSLLGN--TAGSILGG-IAHVTPEFAIHPLIMADKFVYKDDLM-YNIILWDCLVGNMLGQWYKVVGSLELMGDPVGLFNEITDGIALAARQTKRDFKGESDKKGQGAVILMQTLVGAPSDAIGKAANGFGDILKKA----------TYSKNQEADHEPRHVPEGLLQGGVLLGKSLANGVSGLVTKPMQGAKDDGFKGFAKGVGQGTLGLVASPFIGTLGVIEKLSQSVHNTTHLMDDKDFDGTRRIAR 2590
BLAST of mRNA_F-serratus_M_contig105.526.1 vs. uniprot
Match: A0A662X4E4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4E4_9STRA) HSP 1 Score: 164 bits (415), Expect = 5.550e-36 Identity = 165/640 (25.78%), Postives = 277/640 (43.28%), Query Frame = 2 Query: 13532 GETHLWVVDSLGRRYLAV-ASVSLQRATVFLTISASGQFPPFRIENRSSAETLAYRQVD-------AHKTMGWHVLPPLSWHAFLWQEP-DKPRAIEVAFSGTVTRSNYNARYSQEYSMDKIGDREPLEEDSITRTM-LALVATGTRSKRLLSEVRVEGRTRVLSFGDVPLLDGHAQGAHADSLTRF--KRLYTQLDVGVRFAGVSFNIVECSSEGPSEVTSVHVDSLTVAKRSGGNLVEVQVFHVQVDDMRRRTRMPVVLQPTNSGFNSHLRGGGGENVVFQGGAGVATPIPFLRILYESEV-ATMSMPHLKSLDRNRPRPPSVDVIQQEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLARMCR-NKAKVAVRHTVPTPAKR-------DLSMVYVECFRHSSIVVRVELLVGPGALSPDAMALEDPEATTGGLTVLGGSSLTILSVLGSSLAHVSPTFVFDQLVVTHYCGSLRGLTGLVQTALTQQAVAQGYKVLGSMELLGDPLSLVSKFGESVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIFIEDETETGDGQRQSEVKDLEHGVKEGGKVFYESMKAGLAGLIDRPKEGANEEGFAGFIAGMAKGI 15388 G+ +L + +RYL ASV + V++ ++ PP+R+EN + T+ Q+ K M V P +WHAF W P K R IE+ V+ + +++Y +D +G +P+ TM ++ R+ L +V VE TRVL + L + A F +R+ +RF G ++ + P EV VD + + K V H QVD+M + PV++ P N+G++ G P PF++++ ++++ A + L + + ++ +D+++++ L L P L S+ +A R + R P P +VY + R SS+ V +E + D ++ +T GG +V+ G I+ ++GS+L+ SPTF F ++V+ + + L + QQ V Q Y+++GS +++G+P+ LV G VV+F TK E+TGDA T G G KVL K +V S AKITGSL++ + F +D + G+K F + + G G+ +P EGA G G + G +GI Sbjct: 1931 GDVYLQIYSPTRQRYLICQASVQVVDMYVYVILTDVSCAPPYRVENYTPF-TVDCAQLGESSIFSKGQKEMSASVKPG-AWHAFAWFNPLSKDRNIELR----VSHMDAPKAQTKKYDIDYVGYLDPI-------TMWVSRDGEKQRAVELTVQVVVEESTRVLKLVEKELEMSRLENQDAQGEGEFQHRRMLYASSFDIRFDGFGLSLFDGY---PQEVFFSSVDMIELKKAPAALEWTFSVLHCQVDNMLTTAKFPVIMNPVNAGYSDKSVG--------------KDPEPFVKLVLDADLEARVGTYKLLAFSLS------------DLAVKVDIDYLV---SLVKLLEPYLVSDATMAHRSRLTLQRTLQRVAPPVPVMLVTAEGGIQTDLVYFDILRISSLSVDLEYSI----TRKDIVS-----STGGGHSVIFGFISQIIGLIGSNLSG-SPTFNFSEIVIVRCFSTKQRLQSQLIANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGE------FADDSANSXXXXXXXXXXTDNAGLK-----FAKDLGRGFTGIFTKPVEGAMRGGVTGLVQGTVQGI 2504
BLAST of mRNA_F-serratus_M_contig105.526.1 vs. uniprot
Match: A0A024G6F0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6F0_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.430e-36 Identity = 165/609 (27.09%), Postives = 269/609 (44.17%), Query Frame = 2 Query: 13577 LAVASVSLQRATVFLTISASGQFPPFRIENRSSAETLAYRQVDAHKTM-------GWHVLPPLSWHAFLWQEP-DKPRAIEVAFSGTVTRSNYNARYSQEYSMDKIGDREPLEEDSITRTMLALVATGTRSKRLLSEVRVEGRTRVLSF--GDVPLLDGHAQGAH-ADSLTRFKRLYTQLDVGVRFAGVSFNIVECSSEGPSEVTSVHVDSLTVAKRSGGNLVEVQVFHVQVDDMRRRTRMPVVLQPTNSGFNSHLRGGGGENVVFQGGAGVATPIPFLRILYESEVATMSMPHLKSLDRNRPRPPSVDVIQQEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLARMCRNKAKVAVRHTVPT----PAKRDL--SMVYVECFRHSSIVVRVELLVGPGALSPDAMALEDPEATT--GGLTVLGGSSLTILSVLGSSLAHVSPTFVFDQLVVTHYCGSLRGLTGLVQTALTQQAVAQGYKVLGSMELLGDPLSLVSKFGESVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIFIEDET--ETGDGQRQSEVKDLEHGVKEGGKVFYESMKAGLAGLIDRPKEGA 15340 + +AS+ + V++ +S PP+RIEN + ++ Y Q+ + ++ V+ W A W P K R IEV VT N Q+ +D +G + PL+ + T TR + +V V TRVL DV L +Q A L + K LY + +RF G+ ++ + P E+ + VD L + K + + +FH QVD+M R PV+L P NSGF+ E+ P +I E++++ + K LD N + IDL++V L L P +S +++ R + ++ T P+ A ++ + +Y + R ++ V +E + + +D +TT G +V+ G ++ ++GS+L SP F+Q+V+ + L + +QAV Q Y+++GS +++GDP+ LV G V++FF TK E+TGDA T G G +VL K L + KITGSL+ I F ++ET D S GV +GG F + G+ G+I +P EGA Sbjct: 1902 ICLASIQIVDMYVYVILSDVSTAPPYRIENYTPF-SIEYCQLGSSGSLFSGTERESKEVVKSGRWRALAWHNPASKERMIEVR----VTHCN-GKTLPQKLDLDYVGYQTPLKIEIPTEKT-------TRCSEISVQVFVAENTRVLKLIEKDVELRQFESQEAELVVELQQRKVLYASV-FDIRFLGIGLSLFDAL---PQEILLISVDLLQIQKSASSLAWKCSIFHCQVDNMLSTARFPVILNPLNSGFSVKSTN---EDAA-----------PLFQISLEADLSA-KIGIFKLLDVNL----------GSICVKIDLDYVF---SLVKLLDPYFSSSKMILATSRRMREKTLKRTAPSMTLFSADENIRSNAIYFDLLRIHALSVDLEYI----------LTRKDIVSTTQGGSHSVVFGLLSQVVGLIGSNLGG-SPYLRFNQIVIARCFSTKERLKNQLIQNFVRQAVVQAYRLIGSADIIGDPIGLVEDLGSGVIEFFKITKDEVTGDAQTRGEGVRVLGKTLAKSGADTITKITGSLDRFIGE------FADEETAHRNSDCSEDSSPGTTGIGVLDGGLKFAKDFGKGVTGIITKPVEGA 2448 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.526.1 >prot_F-serratus_M_contig105.526.1 ID=prot_F-serratus_M_contig105.526.1|Name=mRNA_F-serratus_M_contig105.526.1|organism=Fucus serratus male|type=polypeptide|length=4917bp MRRPSRLASTFGPRFTMIGVEYHPRTVLSRIDDRWNGHCFGLCLDAFDCKback to top mRNA from alignment at F-serratus_M_contig105:768601..811477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.526.1 ID=mRNA_F-serratus_M_contig105.526.1|Name=mRNA_F-serratus_M_contig105.526.1|organism=Fucus serratus male|type=mRNA|length=42877bp|location=Sequence derived from alignment at F-serratus_M_contig105:768601..811477+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:768601..811477+ >mRNA_F-serratus_M_contig105.526.1 ID=mRNA_F-serratus_M_contig105.526.1|Name=mRNA_F-serratus_M_contig105.526.1|organism=Fucus serratus male|type=CDS|length=29502bp|location=Sequence derived from alignment at F-serratus_M_contig105:768601..811477+ (Fucus serratus male)back to top |