mRNA_F-serratus_M_contig105.522.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.522.1
Unique NamemRNA_F-serratus_M_contig105.522.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Match: D8LKH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH5_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.800e-53
Identity = 110/215 (51.16%), Postives = 140/215 (65.12%), Query Frame = 1
Query:  196 MLRRIVDVLSDPASSGTGGGPDEPLLLVQKLALDETDAIFGAFDKKFVNVATDAAGWNPLPGGFNRWVERYYREVLRRTRPVIVTVHGDDVCALEQELSLEARMAKT--GMTDSGLEDS--------HQTG--RRTPGEGEDFTVPFRYIPIGFGGFDIRNGLPQKTYIDAARRQLE-LLERCPANNSGRYDLL--FQCNTLDRNPRGEIFKLMT 795
            MLR++V VL+DP S+G GG PDEPLLLVQKLALDETDAIFGAF+ +F+  A DA  W+PLPGGF+RW+ RY+R  L  +RPV+ TVHGDDVCALE+EL L  R+     G+T + + DS           G  R+   E    ++P   +       + R+GLP   YIDAARRQ E L+E CP + +G    L  FQ NTLDR+PR +I+K MT
Sbjct:    1 MLRQVVKVLTDPTSAGLGGRPDEPLLLVQKLALDETDAIFGAFEPRFLGYAADAGSWSPLPGGFSRWLARYHRVALHGSRPVLATVHGDDVCALEKELYLGVRVPSEAGGVTPNDIIDSIAEEPPASASAGFRRQATNERGKVSIPADRVR------ETRSGLPHTAYIDAARRQPEVLIETCPIDRAGSQLRLAVFQGNTLDRDPRTKIWKQMT 209          
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Match: A0A6H5JBL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL0_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.060e-5
Identity = 29/68 (42.65%), Postives = 35/68 (51.47%), Query Frame = 1
Query: 1126 LQFEKLTHGYWRRYIRTETLRAGG---------------AEEGAPYVERSVEPLNKPGWETFRRVGCF 1284
            +Q +KLTHG+WR Y+R E LR  G               A   A YV+R   P+  P W TFRRVG F
Sbjct:   15 VQVDKLTHGFWRCYVRREILRVAGVGVTPECFAHTNPVAAAAAAYYVDRWSLPMGSPDWTTFRRVGHF 82          
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Match: A0A7S0ZXT0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZXT0_NOCSC)

HSP 1 Score: 59.7 bits (143), Expect = 1.310e-5
Identity = 49/165 (29.70%), Postives = 72/165 (43.64%), Query Frame = 1
Query:  748 NTLDRNPRGEIFKLMTEKESGPIPINRAPLE----------PRDMVVATTKGIFAVSPPGTGADCFRHYEMLLGGNIVMVPDT-YSLRQFLKGLPVFFFGHDKGWEWGGLTCERLLEMAKAIQTALR-EDGDGTSQEGLQFEKLTHGYWRRYIRTETLRAGGAEE 1206
            N +    R  IF+ + E +S     +  PL+          P ++  A +K +F +SPPG+G DC+R YE+LL G I +V D         +GLPV       G  +  L     L + +   T+   +D D    E L F+     YWRR +    L  GG  E
Sbjct:  339 NKMSHKARKTIFEHLCETKSNGNESDYTPLDQVSCSQTQRTPHEIYNAASKYLFGLSPPGSGWDCYRTYELLLLGIIPIVFDRPQGTHDLFEGLPVLLL--PSGTNFSALRATDFLRLMREYVTSRAFQDNDFDGWERLFFK-----YWRRRL----LSDGGRHE 492          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKH5_ECTSI3.800e-5351.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBL0_9PHAE1.060e-542.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0ZXT0_NOCSC1.310e-529.70Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:678074..683541 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score70.1
Seed ortholog evalue4.5e-09
Seed eggNOG ortholog5141.EFNCRP00000001480
Hectar predicted targeting categoryother localisation
EggNOG free text desc.present in yeast cell wall integrity and stress response component proteins
EggNOG OGs217KF@147550,38SZJ@33154,3PBAB@4751,3R143@4890,3UEX0@5139,KOG4157@1,KOG4157@2759
COG Functional cat.GO
Best tax levelSordariales
Best eggNOG OGNA|NA|NA
Exons10
Model size2016
Cds size2016
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.522.1prot_F-serratus_M_contig105.522.1Fucus serratus malepolypeptideF-serratus_M_contig105 678074..683541 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928878.4822814-CDS-F-serratus_M_contig105:678073..6784371622928878.4822814-CDS-F-serratus_M_contig105:678073..678437Fucus serratus maleCDSF-serratus_M_contig105 678074..678437 -
1690962611.96511-CDS-F-serratus_M_contig105:678073..6784371690962611.96511-CDS-F-serratus_M_contig105:678073..678437Fucus serratus maleCDSF-serratus_M_contig105 678074..678437 -
1622928878.4980772-CDS-F-serratus_M_contig105:678968..6790861622928878.4980772-CDS-F-serratus_M_contig105:678968..679086Fucus serratus maleCDSF-serratus_M_contig105 678969..679086 -
1690962611.9775217-CDS-F-serratus_M_contig105:678968..6790861690962611.9775217-CDS-F-serratus_M_contig105:678968..679086Fucus serratus maleCDSF-serratus_M_contig105 678969..679086 -
1622928878.612779-CDS-F-serratus_M_contig105:679329..6794271622928878.612779-CDS-F-serratus_M_contig105:679329..679427Fucus serratus maleCDSF-serratus_M_contig105 679330..679427 -
1690962611.9868243-CDS-F-serratus_M_contig105:679329..6794271690962611.9868243-CDS-F-serratus_M_contig105:679329..679427Fucus serratus maleCDSF-serratus_M_contig105 679330..679427 -
1622928878.6288717-CDS-F-serratus_M_contig105:679709..6799501622928878.6288717-CDS-F-serratus_M_contig105:679709..679950Fucus serratus maleCDSF-serratus_M_contig105 679710..679950 -
1690962611.9958482-CDS-F-serratus_M_contig105:679709..6799501690962611.9958482-CDS-F-serratus_M_contig105:679709..679950Fucus serratus maleCDSF-serratus_M_contig105 679710..679950 -
1622928878.6422539-CDS-F-serratus_M_contig105:680484..6806671622928878.6422539-CDS-F-serratus_M_contig105:680484..680667Fucus serratus maleCDSF-serratus_M_contig105 680485..680667 -
1690962612.0043237-CDS-F-serratus_M_contig105:680484..6806671690962612.0043237-CDS-F-serratus_M_contig105:680484..680667Fucus serratus maleCDSF-serratus_M_contig105 680485..680667 -
1622928878.655308-CDS-F-serratus_M_contig105:680874..6809851622928878.655308-CDS-F-serratus_M_contig105:680874..680985Fucus serratus maleCDSF-serratus_M_contig105 680875..680985 -
1690962612.0124912-CDS-F-serratus_M_contig105:680874..6809851690962612.0124912-CDS-F-serratus_M_contig105:680874..680985Fucus serratus maleCDSF-serratus_M_contig105 680875..680985 -
1622928878.6750638-CDS-F-serratus_M_contig105:681335..6815111622928878.6750638-CDS-F-serratus_M_contig105:681335..681511Fucus serratus maleCDSF-serratus_M_contig105 681336..681511 -
1690962612.0237076-CDS-F-serratus_M_contig105:681335..6815111690962612.0237076-CDS-F-serratus_M_contig105:681335..681511Fucus serratus maleCDSF-serratus_M_contig105 681336..681511 -
1622928878.6908152-CDS-F-serratus_M_contig105:681831..6819591622928878.6908152-CDS-F-serratus_M_contig105:681831..681959Fucus serratus maleCDSF-serratus_M_contig105 681832..681959 -
1690962612.0459783-CDS-F-serratus_M_contig105:681831..6819591690962612.0459783-CDS-F-serratus_M_contig105:681831..681959Fucus serratus maleCDSF-serratus_M_contig105 681832..681959 -
1622928878.70988-CDS-F-serratus_M_contig105:682478..6826191622928878.70988-CDS-F-serratus_M_contig105:682478..682619Fucus serratus maleCDSF-serratus_M_contig105 682479..682619 -
1690962612.0622287-CDS-F-serratus_M_contig105:682478..6826191690962612.0622287-CDS-F-serratus_M_contig105:682478..682619Fucus serratus maleCDSF-serratus_M_contig105 682479..682619 -
1622928878.7271926-CDS-F-serratus_M_contig105:683085..6835411622928878.7271926-CDS-F-serratus_M_contig105:683085..683541Fucus serratus maleCDSF-serratus_M_contig105 683086..683541 -
1690962612.0760953-CDS-F-serratus_M_contig105:683085..6835411690962612.0760953-CDS-F-serratus_M_contig105:683085..683541Fucus serratus maleCDSF-serratus_M_contig105 683086..683541 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.522.1

>prot_F-serratus_M_contig105.522.1 ID=prot_F-serratus_M_contig105.522.1|Name=mRNA_F-serratus_M_contig105.522.1|organism=Fucus serratus male|type=polypeptide|length=672bp
MFERGDMPHRAPPDRHDNFRAAYRKPTGEVNAPAHGTCSSGEIVGLEKCP
ELEGAVGEMLAAKADMLRRIVDVLSDPASSGTGGGPDEPLLLVQKLALDE
TDAIFGAFDKKFVNVATDAAGWNPLPGGFNRWVERYYREVLRRTRPVIVT
VHGDDVCALEQELSLEARMAKTGMTDSGLEDSHQTGRRTPGEGEDFTVPF
RYIPIGFGGFDIRNGLPQKTYIDAARRQLELLERCPANNSGRYDLLFQCN
TLDRNPRGEIFKLMTEKESGPIPINRAPLEPRDMVVATTKGIFAVSPPGT
GADCFRHYEMLLGGNIVMVPDTYSLRQFLKGLPVFFFGHDKGWEWGGLTC
ERLLEMAKAIQTALREDGDGTSQEGLQFEKLTHGYWRRYIRTETLRAGGA
EEGAPYVERSVEPLNKPGWETFRRVGCFSRRKTFHYLDVGRRVEAFLTVG
ERTPEGCAARCSMQAGGGVGFFGISDGNTCWCDYSSPGVVAIPKDECDFD
CAHGEGQGGCGGRRGRSTSYVFGPEKGAPFGYLGCFPQHSHHMIHVKTWF
RRTNTPYMCEAFCTSLRYPFFALEDSQWCHCGVIPSNTPRSVQVPAYLPG
KGYKPDLSPPNASHAAKSVPEGVRLGDPRFACHLGRCSGNPSLWGCGGNG
VLDVYMNLEPCVLFRDCEDGV*
back to top

mRNA from alignment at F-serratus_M_contig105:678074..683541-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.522.1 ID=mRNA_F-serratus_M_contig105.522.1|Name=mRNA_F-serratus_M_contig105.522.1|organism=Fucus serratus male|type=mRNA|length=5468bp|location=Sequence derived from alignment at F-serratus_M_contig105:678074..683541- (Fucus serratus male)
ATGTTCGAGCGCGGAGATATGCCCCATCGAGCCCCTCCGGATCGTCACGA CAACTTCAGAGCCGCCTATCGAAAACCCACTGGAGAAGTCAACGCCCCAG CGCATGGCACGTGCTCCTCAGGGGAGATCGTGGGGTTGGAGAAGTGCCCG GAATTGGAGGGTGCCGTTGGCGAGATGCTCGCTGCCAAGGCCGACATGTT GCGGAGGATTGTGGACGTCCTCAGCGATCCTGCAAGCTCCGGAACCGGTG GTGGTCCTGACGAACCGCTATTATTAGTTCAGAAGCTCGCTCTCGACGAA ACGGACGCGATATTTGGAGCGTTCGATAAAAAATTCGTGAACGTCGCTAC GGATGCCGCGGGTTGGAACCCTCTTCCCGGCGGGTTCAACCGGTGGGTCG AAAGATACTACAGGGAGGTGCTGCGCCGGACCCGGCCGGTCATCGTCACG GTGCATGTGAGGTCCTTTTGCAGTATGTAACGCGCTGCCTTTCCGTATCA TTCGCCCGCCGCCGTGGAATGGCCTGTTGACGAGAGCACTTGCTTGGGTG TGGGCGACCGACGTACGCTCCTTCATTTCGCTCTCTTCGCAGCGGTATTT TTTTTGTACTGCTTATCGCGTGGTGCGTATTTAACATGCAAATGCTGTGT AGTGAAGCAGTGCATTCGTTCCTTTGCGTCCGGCTCTGTTGGGGTTGTTT GGTCATGCGCCTGTTTAAATGTGATGCCCCCCCCCCCCCCCCCCCCCCCC TCCCCTCCCCTCCCCTCCCAGCGCTTTTTAAATCACAACTCGCGCATCAA AAGGTGTCCCGTCCCCCTCTTTTCTCTCTCCAACATTTTTCGCGTCCGTG TCGAAACCGTGACTCCTCCTCGTCCGCCCTACCATGTGCGTCTGTGTGCC CTGCGAAAACATGCTTGCGAAGGGCGATGACGTGTGCGCTTTGGAGCAGG AGCTGTCTCTTGAGGCCAGGATGGCGAAGACCGGAATGACCGACTCGGGA CTAGAGGACTCGCACCAAACAGGCCGCCGGACGCCCGGAGAGGGTGAAGA TTTTACTGTCCCCGTCGTGCTTATGACGCTCGGGTGGGACCCCGCTGGGG ATCCGACGCACGGGCAAGTCAGCATGGGGAGGGACCGCTCATGCGCGTTG CGGGTCCTGAAGATAAAGAGGGTGGTTCGTTGGTTCACGTCGCACACGCG GTCCGACTCTCATACCGATAGCGTGGTGAGAACCTCTTACGTCTAGAGCT AGGTTTCTGCGGATGTAGCAAGCCCCCTCGAGGCTTGGTCGAGAAGTGAG GAATAGCAAACGCTCGAAGGCACGCTTTGATCAACGAGTCGTTGTTCGAA ATCTGCCCCCGTTTTTCAAAGACGTATATAGGGAGGAAAACTCCACTTCC AAAACGTTTATTTTTCATCGCCCCTGCATCACTCACTCACGCCGACTTCG TTGTAAGAAACCACGGGGGGGGAAGGTTGGGGGGGTAGGTAACGCACTTC CACGCCATGATAGCCGCCATGATATGTCACTAACCATGTGATAGTTGTTC TGATGAGCCCTTGCACCCGTATATTCTCCCAGTTTCGCTACATTCCGATC GGGTTCGGCGGCTTCGACATTCGAAACGGTTTGCCCCAGAAGACATACAT CGACGCCGCCAGGAGACAACTGGAGTTGTTGGAGAGGTGCCCGGCTAATA ATAGCGGGAGGTGAGAAGCTCGATGCGAGTGAGCGCCTCGCGGTGTGGGG TCTACATACATGGACTGCTCAAAGCGAGTCGGCAAGCGACCGCTACTATT TAATACTAATAAAAATGTGACTCGATCGATCACGGCGCGATTGCCTTCAT CAAATCCAGTTGAAACCCATAGCATCCAGCGCTACAAGATTTAGCCCCCT CCTGTCACGGCTTTTTCACGAGGATATGGACACCAGTGCTATGAAACGGA CTCGGGTTACGACGCCCACGCTCTGTCTGACGACTGCCCCCCACCCCAAC CCCCTACTTTGGGTCGGTGACGATTCGCAGGTACGACCTACTGTTCCAGT GCAACACTCTCGACCGTAACCCTAGGGGTGAGATCTTCAAGCTTATGACG GAAAAGGAGTCCGGCCCTATCCCGATCAACCGCGCTCCTCTCGAGCCGCG CGACATGGTCGTCGCCACGACGAAGGGGATCTTTGCGGTCAGCCCACCCG GGACAGGTGATGAGGCCTTCTTCTTGACCCTCCTTGCTGCTCGTCTGCCC CGCCCGCTCGTTTCTTTTAACGTTCGATGTATATATGTTAGCATAAGGAA GCCACTTGCTTTCTGTTTCTGATGCCACGCTCTCCTGTTGCGGCCTGCCG CCCTTGGTGTATCAGGGGTGACCGACCCATTTGTAAGAACTGACGCCTTG AAGGAAGGGGCTGCCCATATGACCATCTGCAAGGATGATGGCGTGGACAT CGAACGCTGCCAACTAACCCGACTTGGTCCTTTTCTCGCGGCTCTTTAAC CCCGTAGCTGCCTCCCACCCGAAAACGCTCTGCCGCACTAACCCACACTC TGGCAGGCGCGGACTGTTTTCGCCACTACGAAATGCTGCTTGGGGGCAAC ATCGTTATGGTCCCTGACACTTACAGCCTCCGACAGTTCCTGAAAGGTCT CCCCGTGTTCTTTTTCGGTGAGGGTTCGAGCGACGCCGTACTGAAAACGC CGGCGAAGTCGCGGCAGTGTTTTGCAATCAACCTATTTGTTTGTCCATTT CATCGTTCGCCGAGGCTCAACGCACGAATAAAAAAGTAGAGGTGCCCTCT AAAAAAGGAAGTAATAGCTCTCGTGAGCGGGACACGACCGTGACTAGGCT TCCCTTTGGATTTCCTTCGGCCAGGGCACGACAAGGGGTGGGAGTGGGGA GGACTGACCTGCGAACGTTTGCTCGAGATGGCGAAAGCAATCCAGACAGC TCTCCGCGAAGACGGGGATGGCACGAGCCAAGAGGGGCTGCAGTTCGAGA AGCTTACCCACGGATACTGGAGGCGGTACATCCGCACGGAGACGTTGCGG GCGGGAGGTGTGCCCAGAAACAGAGCTTCTGGCGACTTTGGCTTTTGATT TCATGGTTTACTTTTTGCCGGGGTTAGGAGGGAAGGGGGAGGGGGGGACA AGCGTACTAGGTCACCAATGCCACCACGTTGTGCAGCGCAATACTTGGTT CATACTTCGTATGTCTTTTTGTCTACGAGGAGTAGGCCTAGCGCTTCCAA CACTCGTCCTAAAATAAGTGCACTCGCTTTTTCGACGTTCTCGCGCTTTT TACCCTTCTACGGCAATGTGTAGTATATTAGAGCAAGGGGATTGAGAGTC TGGGCCCTGTACCGACTTGAGGCAGCACTCGCAACCGAAGACTCGAGGCC CTCTTATTCTTATAATTGCAACAAGTTTTAGAAGAGCGAGGTAGGTCTTT GGCAAATATCGATCCGCAGGCGGTCGAGAAGGCCTGGGTCTGACTGAACT TTTGATCGGAAGAACCAATCCATGGCGCATATGGGAATGGCTGACCGCCA ACCCCGCCGCTCGTGGCAACCCGCGCCGCGCCGTCGGTCAGGCGCTGAAG AAGGCGCGCCTTACGTCGAAAGATCGGTGGAGCCGCTCAACAAGCCCGGG TGGGAGACGTTCCGGCGTGTTGGTTGCTTTTCGCGTAGGAAAACTTTCCA CTATCTCGACGTCGGGAGAAGGGTGGAGGCCTTTCTAACCGTGGGGGAGC GTACCCCGGAAGGCTGTGCCGCTCGCTGCTCTATGCAAGCCGGGGGTGGC GTTGGGTTCTTCGGCATATCCGACGGGAACACGTGAGTTGCAGTCAGCTG GCTCGTTCGCCCGCTTCCTGCCGTCGATGGAACGTATTCAAAGCAAATGG TAAAGGGCAGGCACCCTGTTTGAAGAGTTGGAAGTTGTATCCCTCGTATC TGTCTTGTTTGTCGTACTCGCAGCCGTCGGTCAGGCGAGATCGGGCATTT GACAAGTCTTTTAGGCCTAACTTTTTCAGCTTCCAGCTAACCTGCCCCAA TGCCATGTCTTCTTCGTTTTCATGGGTTTGATTTTTTTGTGATGAACTAT GCGGTCGTTTCCAGCTGTTGGTGCGATTACTCTTCGCCCGGGGTCGTGGC GATCCCCAAGGACGAGTGCGACTTCGACTGCGCACATGGGGAGGGTCAAG GAGGCTGTGGAGGTGCGACTGTTCCTCGGACTGCCGCTAGCATAATTGTG TTGATACCGCGGTCGCGGCACGGCCGGCCTTCACCCTGCATTGTACCGAA CGTCCTGAAGTACCCTCACGGCTAGCCACGATTCAAAAAGTAAGCATCGA GCTTGACGCTGACCAGATTCCTTCGCGGCTGTTTTTGCCCTCTTTATCGG CGATCGGAAAATGACTGGGCGTCCTCATGGACGGGGGGCTGCGGGCGAAA AATAGGGAGGAGGGGAAGGAGCACAAGTTACGTGTTCGGTCCGGAGAAGG GCGCCCCCTTCGGATACCTGGGGTGCTTCCCTCAGCATTCCCATCATATG ATTCACGTCAAAACCTGGTTTAGGTGAGAACATGGACGGCATCAACCTAA CGCTCTCAGAATATGCCTGTCAAAGAAATGCATGCTGGAGAGTTGGAGTG AAGAGCAGAGAAAAGTGCGTTCTCGGTTTTTCTGACAGATGGAAATTCTC GGTTGAGGAAACTCCGCGCTAACCCCGCGTTAGTTCTCCCAGGAACACTG AAACTTACTCATGGCATGCCCTCTCATATCTCGCGCGTAGTCTAAATATT GAAACGACAGTCGATGTAGTCAAACGGCAGAGGTCGCAATATTGGAACGA CAAGTGAACGGTGAAATCGAAACGACAGTTTTTTTTTGTTTTTTTTTAGA CGACGGCGTGATGAGGCGTCGCCCACCGCGCCTTGCATCGCTCTCTCATC AACTTACCATAGCTCACTCCGGCCTTTGCCTCGAGGATCGACAACCTATT GGCACGAAAATCGGCTCTCGGCTTGCGCTTTTCTCGCCACTGTGTCGAAC ACTGCGTATTGTATCCCCCAATTTCAGTTTCCGTTTGCCGCCCTCCCCCC TCAGGAGGACAAACACCCCCTACATGTGCGAGGCCTTTTGCACTTCCTTG CGGTACCCCTTCTTCGCCCTGGAAGATTCTCAGTGGTGCCACTGCGGCGT GATTCCCTCGAACACACCGCGCTCGGTTCAGGTCCCGGCGTACCTCCCGG GGAAGGGCTACAAGCCCGACCTATCGCCACCGAATGCGAGCCACGCCGCG AAAAGCGTTCCCGAAGGCGTGCGCTTGGGAGACCCACGCTTTGCCTGCCA CCTGGGCCGGTGTAGCGGGAACCCGTCGTTGTGGGGCTGTGGAGGAAATG GCGTCCTCGATGTCTACATGAACCTTGAACCCTGCGTGCTCTTCCGGGAC TGTGAAGACGGGGTCTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig105:678074..683541-

>mRNA_F-serratus_M_contig105.522.1 ID=mRNA_F-serratus_M_contig105.522.1|Name=mRNA_F-serratus_M_contig105.522.1|organism=Fucus serratus male|type=CDS|length=4032bp|location=Sequence derived from alignment at F-serratus_M_contig105:678074..683541- (Fucus serratus male)
ATGTTCGAGCGCGGAGATATGCCCCATCGAGCCCCTCCGGATCGTCACGA
CAACTTCAGAGCCGCCTATCGAAAACCCACTGGAGAAGTCAACGCCCCAG
CGCATGGCACGTGCTCCTCAGGGGAGATCGTGGGGTTGGAGAAGTGCCCG
GAATTGGAGGGTGCCGTTGGCGAGATGCTCGCTGCCAAGGCCGACATGTT
GCGGAGGATTGTGGACGTCCTCAGCGATCCTGCAAGCTCCGGAACCGGTG
GTGGTCCTGACGAACCGCTATTATTAGTTCAGAAGCTCGCTCTCGACGAA
ACGGACGCGATATTTGGAGCGTTCGATAAAAAATTCGTGAACGTCGCTAC
GGATGCCGCGGGTTGGAACCCTCTTCCCGGCGGGTTCAACCGGTGGGTCG
AAAGATACTACAGGGAGGTGCTGCGCCGGACCCGGCCGGTCATCGTCACG
GTGCATATGTTCGAGCGCGGAGATATGCCCCATCGAGCCCCTCCGGATCG
TCACGACAACTTCAGAGCCGCCTATCGAAAACCCACTGGAGAAGTCAACG
CCCCAGCGCATGGCACGTGCTCCTCAGGGGAGATCGTGGGGTTGGAGAAG
TGCCCGGAATTGGAGGGTGCCGTTGGCGAGATGCTCGCTGCCAAGGCCGA
CATGTTGCGGAGGATTGTGGACGTCCTCAGCGATCCTGCAAGCTCCGGAA
CCGGTGGTGGTCCTGACGAACCGCTATTATTAGTTCAGAAGCTCGCTCTC
GACGAAACGGACGCGATATTTGGAGCGTTCGATAAAAAATTCGTGAACGT
CGCTACGGATGCCGCGGGTTGGAACCCTCTTCCCGGCGGGTTCAACCGGT
GGGTCGAAAGATACTACAGGGAGGTGCTGCGCCGGACCCGGCCGGTCATC
GTCACGGTGCATGGCGATGACGTGTGCGCTTTGGAGCAGGAGCTGTCTCT
TGAGGCCAGGATGGCGAAGACCGGAATGACCGACTCGGGACTAGAGGACT
CGCACCAAACAGGCCGCCGGACGCCCGGAGAGGGTGAAGATTTTACTGTC
CCCGGCGATGACGTGTGCGCTTTGGAGCAGGAGCTGTCTCTTGAGGCCAG
GATGGCGAAGACCGGAATGACCGACTCGGGACTAGAGGACTCGCACCAAA
CAGGCCGCCGGACGCCCGGAGAGGGTGAAGATTTTACTGTCCCCTTTCGC
TACATTCCGATCGGGTTCGGCGGCTTCGACATTCGAAACGGTTTGCCCCA
GAAGACATACATCGACGCCGCCAGGAGACAACTGGAGTTGTTGGAGAGGT
GCCCGGCTAATAATAGCGGGAGTTTCGCTACATTCCGATCGGGTTCGGCG
GCTTCGACATTCGAAACGGTTTGCCCCAGAAGACATACATCGACGCCGCC
AGGAGACAACTGGAGTTGTTGGAGAGGTGCCCGGCTAATAATAGCGGGAG
GTACGACCTACTGTTCCAGTGCAACACTCTCGACCGTAACCCTAGGGGTG
AGATCTTCAAGCTTATGACGGAAAAGGAGTCCGGCCCTATCCCGATCAAC
CGCGCTCCTCTCGAGCCGCGCGACATGGTCGTCGCCACGACGAAGGGGAT
CTTTGCGGTCAGCCCACCCGGGACAGGTACGACCTACTGTTCCAGTGCAA
CACTCTCGACCGTAACCCTAGGGGTGAGATCTTCAAGCTTATGACGGAAA
AGGAGTCCGGCCCTATCCCGATCAACCGCGCTCCTCTCGAGCCGCGCGAC
ATGGTCGTCGCCACGACGAAGGGGATCTTTGCGGTCAGCCCACCCGGGAC
AGGCGCGGACTGTTTTCGCCACTACGAAATGCTGCTTGGGGGCAACATCG
TTATGGTCCCTGACACTTACAGCCTCCGACAGTTCCTGAAAGGTCTCCCC
GTGTTCTTTTTCGGCGCGGACTGTTTTCGCCACTACGAAATGCTGCTTGG
GGGCAACATCGTTATGGTCCCTGACACTTACAGCCTCCGACAGTTCCTGA
AAGGTCTCCCCGTGTTCTTTTTCGGGCACGACAAGGGGTGGGAGTGGGGA
GGACTGACCTGCGAACGTTTGCTCGAGATGGCGAAAGCAATCCAGACAGC
TCTCCGCGAAGACGGGGATGGCACGAGCCAAGAGGGGCTGCAGTTCGAGA
AGCTTACCCACGGATACTGGAGGCGGTACATCCGCACGGAGACGTTGCGG
GCGGGAGGGCACGACAAGGGGTGGGAGTGGGGAGGACTGACCTGCGAACG
TTTGCTCGAGATGGCGAAAGCAATCCAGACAGCTCTCCGCGAAGACGGGG
ATGGCACGAGCCAAGAGGGGCTGCAGTTCGAGAAGCTTACCCACGGATAC
TGGAGGCGGTACATCCGCACGGAGACGTTGCGGGCGGGAGGCGCTGAAGA
AGGCGCGCCTTACGTCGAAAGATCGGTGGAGCCGCTCAACAAGCCCGGGT
GGGAGACGTTCCGGCGTGTTGGTTGCTTTTCGCGTAGGAAAACTTTCCAC
TATCTCGACGTCGGGAGAAGGGTGGAGGCCTTTCTAACCGTGGGGGAGCG
TACCCCGGAAGGCTGTGCCGCTCGCTGCTCTATGCAAGCCGGGGGTGGCG
TTGGGTTCTTCGGCATATCCGACGGGAACACGCGCTGAAGAAGGCGCGCC
TTACGTCGAAAGATCGGTGGAGCCGCTCAACAAGCCCGGGTGGGAGACGT
TCCGGCGTGTTGGTTGCTTTTCGCGTAGGAAAACTTTCCACTATCTCGAC
GTCGGGAGAAGGGTGGAGGCCTTTCTAACCGTGGGGGAGCGTACCCCGGA
AGGCTGTGCCGCTCGCTGCTCTATGCAAGCCGGGGGTGGCGTTGGGTTCT
TCGGCATATCCGACGGGAACACCTGTTGGTGCGATTACTCTTCGCCCGGG
GTCGTGGCGATCCCCAAGGACGAGTGCGACTTCGACTGCGCACATGGGGA
GGGTCAAGGAGGCTGTGGAGCTGTTGGTGCGATTACTCTTCGCCCGGGGT
CGTGGCGATCCCCAAGGACGAGTGCGACTTCGACTGCGCACATGGGGAGG
GTCAAGGAGGCTGTGGAGGGAGGAGGGGAAGGAGCACAAGTTACGTGTTC
GGTCCGGAGAAGGGCGCCCCCTTCGGATACCTGGGGTGCTTCCCTCAGCA
TTCCCATCATATGATTCACGTCAAAACCTGGTTTAGGGAGGAGGGGAAGG
AGCACAAGTTACGTGTTCGGTCCGGAGAAGGGCGCCCCCTTCGGATACCT
GGGGTGCTTCCCTCAGCATTCCCATCATATGATTCACGTCAAAACCTGGT
TTAGGAGGACAAACACCCCCTACATGTGCGAGGCCTTTTGCACTTCCTTG
CGGTACCCCTTCTTCGCCCTGGAAGATTCTCAGTGGTGCCACTGCGGCGT
GATTCCCTCGAACACACCGCGCTCGGTTCAGGTCCCGGCGTACCTCCCGG
GGAAGGGCTACAAGCCCGACCTATCGCCACCGAATGCGAGCCACGCCGCG
AAAAGCGTTCCCGAAGGCGTGCGCTTGGGAGACCCACGCTTTGCCTGCCA
CCTGGGCCGGTGTAGCGGGAACCCGTCGTTGTGGGGCTGTGGAGGAAATG
GCGTCCTCGATGTCTACATGAACCTTGAACCCTGCGTGCTCTTCCGGGAC
TGTGAAGACGGGGTCTGAGAGGACAAACACCCCCTACATGTGCGAGGCCT
TTTGCACTTCCTTGCGGTACCCCTTCTTCGCCCTGGAAGATTCTCAGTGG
TGCCACTGCGGCGTGATTCCCTCGAACACACCGCGCTCGGTTCAGGTCCC
GGCGTACCTCCCGGGGAAGGGCTACAAGCCCGACCTATCGCCACCGAATG
CGAGCCACGCCGCGAAAAGCGTTCCCGAAGGCGTGCGCTTGGGAGACCCA
CGCTTTGCCTGCCACCTGGGCCGGTGTAGCGGGAACCCGTCGTTGTGGGG
CTGTGGAGGAAATGGCGTCCTCGATGTCTACATGAACCTTGAACCCTGCG
TGCTCTTCCGGGACTGTGAAGACGGGGTCTGA
back to top