mRNA_F-serratus_M_contig105.522.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Match: D8LKH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH5_ECTSI) HSP 1 Score: 191 bits (485), Expect = 3.800e-53 Identity = 110/215 (51.16%), Postives = 140/215 (65.12%), Query Frame = 1 Query: 196 MLRRIVDVLSDPASSGTGGGPDEPLLLVQKLALDETDAIFGAFDKKFVNVATDAAGWNPLPGGFNRWVERYYREVLRRTRPVIVTVHGDDVCALEQELSLEARMAKT--GMTDSGLEDS--------HQTG--RRTPGEGEDFTVPFRYIPIGFGGFDIRNGLPQKTYIDAARRQLE-LLERCPANNSGRYDLL--FQCNTLDRNPRGEIFKLMT 795 MLR++V VL+DP S+G GG PDEPLLLVQKLALDETDAIFGAF+ +F+ A DA W+PLPGGF+RW+ RY+R L +RPV+ TVHGDDVCALE+EL L R+ G+T + + DS G R+ E ++P + + R+GLP YIDAARRQ E L+E CP + +G L FQ NTLDR+PR +I+K MT Sbjct: 1 MLRQVVKVLTDPTSAGLGGRPDEPLLLVQKLALDETDAIFGAFEPRFLGYAADAGSWSPLPGGFSRWLARYHRVALHGSRPVLATVHGDDVCALEKELYLGVRVPSEAGGVTPNDIIDSIAEEPPASASAGFRRQATNERGKVSIPADRVR------ETRSGLPHTAYIDAARRQPEVLIETCPIDRAGSQLRLAVFQGNTLDRDPRTKIWKQMT 209
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Match: A0A6H5JBL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL0_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 1.060e-5 Identity = 29/68 (42.65%), Postives = 35/68 (51.47%), Query Frame = 1 Query: 1126 LQFEKLTHGYWRRYIRTETLRAGG---------------AEEGAPYVERSVEPLNKPGWETFRRVGCF 1284 +Q +KLTHG+WR Y+R E LR G A A YV+R P+ P W TFRRVG F Sbjct: 15 VQVDKLTHGFWRCYVRREILRVAGVGVTPECFAHTNPVAAAAAAYYVDRWSLPMGSPDWTTFRRVGHF 82
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Match: A0A7S0ZXT0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZXT0_NOCSC) HSP 1 Score: 59.7 bits (143), Expect = 1.310e-5 Identity = 49/165 (29.70%), Postives = 72/165 (43.64%), Query Frame = 1 Query: 748 NTLDRNPRGEIFKLMTEKESGPIPINRAPLE----------PRDMVVATTKGIFAVSPPGTGADCFRHYEMLLGGNIVMVPDT-YSLRQFLKGLPVFFFGHDKGWEWGGLTCERLLEMAKAIQTALR-EDGDGTSQEGLQFEKLTHGYWRRYIRTETLRAGGAEE 1206 N + R IF+ + E +S + PL+ P ++ A +K +F +SPPG+G DC+R YE+LL G I +V D +GLPV G + L L + + T+ +D D E L F+ YWRR + L GG E Sbjct: 339 NKMSHKARKTIFEHLCETKSNGNESDYTPLDQVSCSQTQRTPHEIYNAASKYLFGLSPPGSGWDCYRTYELLLLGIIPIVFDRPQGTHDLFEGLPVLLL--PSGTNFSALRATDFLRLMREYVTSRAFQDNDFDGWERLFFK-----YWRRRL----LSDGGRHE 492 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.522.1 >prot_F-serratus_M_contig105.522.1 ID=prot_F-serratus_M_contig105.522.1|Name=mRNA_F-serratus_M_contig105.522.1|organism=Fucus serratus male|type=polypeptide|length=672bp MFERGDMPHRAPPDRHDNFRAAYRKPTGEVNAPAHGTCSSGEIVGLEKCPback to top mRNA from alignment at F-serratus_M_contig105:678074..683541- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.522.1 ID=mRNA_F-serratus_M_contig105.522.1|Name=mRNA_F-serratus_M_contig105.522.1|organism=Fucus serratus male|type=mRNA|length=5468bp|location=Sequence derived from alignment at F-serratus_M_contig105:678074..683541- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:678074..683541- >mRNA_F-serratus_M_contig105.522.1 ID=mRNA_F-serratus_M_contig105.522.1|Name=mRNA_F-serratus_M_contig105.522.1|organism=Fucus serratus male|type=CDS|length=4032bp|location=Sequence derived from alignment at F-serratus_M_contig105:678074..683541- (Fucus serratus male)back to top |