mRNA_F-serratus_M_contig105.521.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.521.1 vs. uniprot
Match: A0A6V7QIM7_ANACO (ABC transporter domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QIM7_ANACO) HSP 1 Score: 518 bits (1335), Expect = 8.340e-167 Identity = 294/664 (44.28%), Postives = 407/664 (61.30%), Query Frame = 1
Query: 145 VNPVDLEWKDVSCAVGKKQ------IIQDVSGKASAGKLLAVMGPSGSGKTTLLNALANQIPYSKKTRLYGTVAIAGGKR-KAGQEQAYVKQDDVFYSQLTVRETLVMAARLRLPRDVPLDEKVAKVDELINKLGLSKVADTIVGDAKTRGISGGERKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLQQLAKEGHTVICSIHQPRSSIFRMFDDLMVLSEGRVMYHGPASRVA-GYFQSNG-YPMPADTNPAEFAIDIVSIDYTSKEAEQESRERIARLVDDQASSVSAQTKISALTAGLPSGGASRGRXXXXXVGTRTFVGGGRKEPRSFVRSWRSRWLGDKKALTRVHAGEESAEGMGEALVVKPRIRRRAGLVEQFRLLLSRSWRQVNRAKFANMTRVVANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHPKRDRMLKFLGVLTIEAFAASAMGMLIGCLAKDGDAAMAIGPPLMTIFILFSGFYIAQDNVPRVLRWVKDASMIKHAFEALCVNELKGLDFECDTMSRGPCIRTGEQMLARVAFDKSTVKGATLGLGKILGSCWVLTYITLALANPRFQPMIDPT 2109
V PV + W V+CA+ K+ ++ +VSG+A G+LLA+MGPSGSGKTTLLN LA Q+ S + L G + + G + G + AYV+Q+D+F+SQLTVRETL +A L+LP +P +++ V EL+ +LGL AD+IVGDAK RGISGGE+KRLS+AC+L +PS+IF DEPTTGLD+FQAE+VM TL+QLA++GHTVICSIHQPR S++ FDD+++LSEG V+Y GPA YF + G + P NPAEF D++SIDY+S E+ S++RI LV+ A+ + IS +T LG K +V G +VK +R+G QF LLL R+W Q R N R ++ SA+IFGS+FW++G QT I DR+GLLQ A I AM+ + KT+ FP E +V ER+ YS+ PY LSK++AE+PI A FP +FG ILY M LHP R KF G++T+E+FAASAMG+ +G + +AAMA+GP LMT+FI+F G+Y+ +N P V RW+ S+I+ AF+ LC+NE GL+FE ++TGEQ+L R++F S + + G+IL + TY+ L P++Q ++ PT
Sbjct: 69 VAPVTIRWSGVTCALSDKRGKTMRFLLSNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGYLEVNGRPMSRGGYKIAYVRQEDLFFSQLTVRETLSLAVELQLPDSLPPEKREKYVGELLFRLGLVSCADSIVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLRQLAEDGHTVICSIHQPRGSVYSKFDDIVLLSEGSVVYMGPAKEEPLTYFATFGLFQCPDHVNPAEFLADLISIDYSSAESVHSSQKRIDDLVEAFANRIPITECISPITI-----------------------------------------LGTSKFPAKV----------GRKTLVK----KRSGWWRQFWLLLKRAWMQAWRDGPTNKVRSRMSIASAIIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLLSKLLAEIPIGAAFPLMFGTILYPMARLHPTISRFAKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNAENTPIVFRWIPRVSLIRWAFQGLCINEFSGLEFEHQNSFD---VQTGEQVLERLSFGGSHIGDTMIAQGRILMFWYWTTYLLLKKNKPKYQQLLPPT 674
BLAST of mRNA_F-serratus_M_contig105.521.1 vs. uniprot
Match: A0A7I4ANB0_PHYPA (ABC transporter domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ANB0_PHYPA) HSP 1 Score: 520 bits (1340), Expect = 1.340e-166 Identity = 300/672 (44.64%), Postives = 415/672 (61.76%), Query Frame = 1
Query: 130 SETDRVNPVDLEWKDVSCAVGKKQ------IIQDVSGKASAGKLLAVMGPSGSGKTTLLNALANQIPYSKKTRLYGTVAIAGGK-RKAGQEQAYVKQDDVFYSQLTVRETLVMAARLRLPRDVPLDEKVAKVDELINKLGLSKVADTIVGDAKTRGISGGERKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLQQLAKEGHTVICSIHQPRSSIFRMFDDLMVLSEGRVMYHGPASRVA-GYFQSNGYPMPADTNPAEFAIDIVSIDYTSKEAEQESRERIARLVDDQASSVSAQTKISALTAGLPSGGASRGRXXXXXVGTRTFVGGGRKEPRSFVRSWRSRWLGDKKALTRVHAGEESAEGMGEALVVKPRIRRRAGLVEQFRLLLSRSWRQVNRAKFANMTRVVANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHPKRDRMLKFLGVLTIEAFAASAMGMLIGCLAKDGDAAMAIGPPLMTIFILFSGFYIAQDNVPRVLRWVKDASMIKHAFEALCVNELKGLDFECDTMSRGPCIRTGEQMLARVAFDKSTVKGATLGLGKILGSCWVLTYITLALANPRFQPMIDPTLAAP 2121
S T V PV + W + C + K+ ++Q VSG+A AGKLLA+MGPSGSGKTTLLN LA Q+ S + RL G+++I G K+ AYV+Q+D+F+SQLTVRETL +AA L+LP+ + + V EL+ +LGL ADTIVGDAK RGISGGE+KRLSIAC+L +PS+IF DEPTTGLD+FQAERVM TL++LA+EGHTV+CSIHQPR SI+ FDDL++LS G V+Y GPA+ A YF G+ P TNPAE+ D++SIDY+S + E +R+++A LV+ AS Q KI GR P LT + + + E + + R+G + QF++LL R+WRQ R K N R ++ SA+IFGSIFW++G QT I DR+GLLQ A I AMS + KT+ FP E +V+ E++ YS+ PY ++K++AE P+SA FP +FG ++Y MT L+P R L F GV+T+EAFAASAMG+ +G +A +AA+A+GP LMT+FI+F G+Y+ DN P + RW+ S+I+ AF+AL +NE KGL F+ + ++ G+Q+L R++F V+ A +I + LTY+ L +FQ + P+ P
Sbjct: 138 SPTVGVVPVTVAWDRIECILRDKRGNVIKRLLQGVSGEAKAGKLLAIMGPSGSGKTTLLNVLAGQLAASPRLRLTGSLSINGRPFSKSKHRVAYVRQEDLFFSQLTVRETLALAAELQLPKTWKPNARERYVQELLYRLGLVSCADTIVGDAKVRGISGGEKKRLSIACELIASPSIIFADEPTTGLDAFQAERVMETLRKLAEEGHTVVCSIHQPRGSIYSKFDDLILLSSGAVVYAGPAADHALKYFADLGHKCPEHTNPAEYFADLISIDYSSSDNEIAARKKVADLVEAFASK---QKKI------------------------------GRDNP-----------------LTALDLLMDPDD---EKFIHDTVVSNRSGFLWQFQMLLRRAWRQTTRDKSTNRVRGTMSITSALIFGSIFWRMGRSQTSIQDRMGLLQVAAINTAMSALTKTVNVFPKERAIVQREQAKGSYSLAPYLIAKLVAEAPVSAAFPLMFGAVVYPMTRLNPSLQRFLTFSGVMTVEAFAASAMGLTVGAIAPTTEAALALGPSLMTVFIVFGGYYVNSDNTPTIFRWIPKVSLIRWAFQALSINEFKGLTFD---VKNSFDLQDGDQVLERLSFGGKNVQNAVNQELRIALFWYWLTYVLLKRNKAKFQVLEAPSKVTP 753
BLAST of mRNA_F-serratus_M_contig105.521.1 vs. uniprot
Match: UPI0009F446D6 (ABC transporter G family member 7 isoform X1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F446D6) HSP 1 Score: 516 bits (1329), Expect = 2.410e-166 Identity = 291/664 (43.83%), Postives = 403/664 (60.69%), Query Frame = 1
Query: 130 SETDRVNPVDLEWKDVSCAVGKKQ------IIQDVSGKASAGKLLAVMGPSGSGKTTLLNALANQIPYSKKTRLYGTVAIAGGKR-KAGQEQAYVKQDDVFYSQLTVRETLVMAARLRLPRDVPLDEKVAKVDELINKLGLSKVADTIVGDAKTRGISGGERKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLQQLAKEGHTVICSIHQPRSSIFRMFDDLMVLSEGRVMYHGPAS-RVAGYFQSNGYPMPADTNPAEFAIDIVSIDYTSKEAEQESRERIARLVDDQASSVSAQTKISALTAGLPSGGASRGRXXXXXVGTRTFVGGGRKEPRSFVRSWRSRWLGDKKALTRVHAGEESAEGMGEALVVKPRIRRRAGLVEQFRLLLSRSWRQVNRAKFANMTRVVANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHPKRDRMLKFLGVLTIEAFAASAMGMLIGCLAKDGDAAMAIGPPLMTIFILFSGFYIAQDNVPRVLRWVKDASMIKHAFEALCVNELKGLDFECDTMSRGPCIRTGEQMLARVAFDKSTVKGATLGLGKILGSCWVLTYITLALANPRFQPM 2097
S++ +V PV + W ++C + K+ ++ +VSG+A G+LLA+MGPSGSGKTTLLN LA Q+ S + L G + I G R G + AYV+Q+D+F+SQLT RETL +AA L+LP ++++ V+EL+ +LGL AD+IVGDAK RGISGGE+KRLS+AC+L +PS+IF DEPTTGLD+FQAE+VM TLQQLA+EGHTVICSIHQPRSS++ FDD+++LSEG V+Y+GPA YF GY P NPAEF D++S+DY+S E+ S+ RI + V + + +V +S + A S K F R KALT+ +AG +QFRLLL R+W Q R N R ++ SA+IFGS+FW++G QT I DR+GLLQ A I AM+ + KT+ FP E T++ E Y++ PY LSK++AE+PI A FP +FG +LY M LHP R KF G++T+E+FAASAMG+ +G + +AAMA+GP LMT+FI+F G+Y+ +N P + +W+ S+I+ AF+ LC+NE GL FE I TGEQ L R +F S + G+IL + +TY+ L P++Q +
Sbjct: 48 SDSGKVVPVTIRWSGITCCLSDKRGKTTRFLLTNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGHLDINGKSRLTGGYKIAYVRQEDLFFSQLTPRETLSIAAELQLPEFASVEKRDKYVNELLFRLGLINCADSIVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLQQLAQEGHTVICSIHQPRSSVYNNFDDIVLLSEGSVVYNGPAKDEPLKYFAKFGYECPDHMNPAEFLADLISVDYSSAESVHSSQARIDKFVAEFSENVLVIECVSPVDAWKNS-----------------------KIQTKFAR----------KALTK----------------------HQAGWWKQFRLLLKRAWMQAFRDGPTNKVRTRMSVASAIIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVSVFPKERTIIDREHEKGSYAMGPYLLSKLLAEIPIGAAFPLMFGTLLYPMARLHPSLSRFAKFCGIITMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNAENTPVIFKWIPHISLIRWAFQGLCINEFSGLQFEHHNSYD---IETGEQALERFSFGGSGIGDTITAQGRILMFWYCITYLLLKNNKPKYQQL 653
BLAST of mRNA_F-serratus_M_contig105.521.1 vs. uniprot
Match: A0A3B6FFE0_WHEAT (ABC transporter domain-containing protein n=7 Tax=BOP clade TaxID=359160 RepID=A0A3B6FFE0_WHEAT) HSP 1 Score: 516 bits (1329), Expect = 2.730e-166 Identity = 288/669 (43.05%), Postives = 399/669 (59.64%), Query Frame = 1
Query: 133 ETDRVNPVDLEWKDVSCAVGKKQ------IIQDVSGKASAGKLLAVMGPSGSGKTTLLNALANQIPYSKKTRLYGTVAIAGGKR-KAGQEQAYVKQDDVFYSQLTVRETLVMAARLRLPRDVPLDEKVAKVDELINKLGLSKVADTIVGDAKTRGISGGERKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLQQLAKEGHTVICSIHQPRSSIFRMFDDLMVLSEGRVMYHGPASRVA-GYFQSNGYPMPADTNPAEFAIDIVSIDYTSKEAEQESRERIARLVDDQASSVSAQTKISALTAGLPSGGASRGRXXXXXVGTRTFVGGGRKEPRSFVRSWRSRWLGDKKALTRVHAGEESAEG--MGEALVVKPRIRRRAGLVEQFRLLLSRSWRQVNRAKFANMTRVVANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHPKRDRMLKFLGVLTIEAFAASAMGMLIGCLAKDGDAAMAIGPPLMTIFILFSGFYIAQDNVPRVLRWVKDASMIKHAFEALCVNELKGLDFECDTMSRGPCIRTGEQMLARVAFDKSTVKGATLGLGKILGSCWVLTYITLALANPRFQPMIDPT 2109
E V PV + W V+CA+ K+ ++ ++SG+A G+LLA+MGPSGSGKTTLLN LA Q+ S L G + + G + G + AYV+Q+D+F+SQLTVRETL +AA L+LP + + K V++L+ +LGL AD+IVGDAK RGISGGE+KRLS+AC+L +PS+IF DEPTTGLD+FQAE+VM TL+QLA++GHTVICSIHQPR S++ FDD+++LSEG V+Y GPA YF S GY P NPAEF D++S DY+S E+ Q S++RI L+DD +K +T ++ +EG L K ++R G QF LL R+W Q R N R ++ SA+IFGS+FW++G QT I DR+GLLQ A I AM+ + KT+ FP E ++ ER+ Y++ PY SK++AE+PI A FP +FG ILY M LHP R KF G++T+E+FAASAMG+ +G +A +AAMA+GP LMT+FI+F G+Y+ DN P + RW+ AS+I+ AF+ LC+NE KGL FE ++TGEQ L R + + + G+IL + +TY+ L R+Q ++ P+
Sbjct: 46 EGGGVRPVTIRWARVTCALKNKRGDVARFLLSNLSGEAKPGRLLALMGPSGSGKTTLLNVLAGQLAASPSLHLSGFLYVNGQPMSQGGYKIAYVRQEDIFFSQLTVRETLSLAAELQLPDTMSPERKEKYVNDLLFRLGLVNSADSIVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLRQLAEDGHTVICSIHQPRGSVYSKFDDIVLLSEGEVVYMGPAKEEPLKYFASLGYQCPDHENPAEFLADLISTDYSSAESVQSSQKRIENLIDD---------------------------------------------------------FANKVLITEFNSPVTQSEGSEFSTKLAQKSTSKQRRGWWRQFHLLFKRAWMQAFRDGPTNKVRARMSVASAIIFGSVFWRMGKTQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIIDRERAKGSYALGPYLSSKLLAEIPIGAAFPLMFGSILYPMAKLHPTISRFAKFCGIVTVESFAASAMGLTVGAIAPTTEAAMALGPSLMTVFIVFGGYYVNPDNTPVIFRWIPKASLIRWAFQGLCINEFKGLQFE---HQHSYDVQTGEQALERFSLGGIRIADTLVAQGRILMFWYWMTYLLLKKNRARYQQLLPPS 654
BLAST of mRNA_F-serratus_M_contig105.521.1 vs. uniprot
Match: A0A7I8KYS7_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KYS7_SPIIN) HSP 1 Score: 516 bits (1328), Expect = 7.040e-166 Identity = 286/662 (43.20%), Postives = 402/662 (60.73%), Query Frame = 1
Query: 145 VNPVDLEWKDVSCAVGKKQ------IIQDVSGKASAGKLLAVMGPSGSGKTTLLNALANQIPYSKKTRLYGTVAIAGGKRKAGQEQ-AYVKQDDVFYSQLTVRETLVMAARLRLPRDVPLDEKVAKVDELINKLGLSKVADTIVGDAKTRGISGGERKRLSIACQLFGTPSLIFCDEPTTGLDSFQAERVMSTLQQLAKEGHTVICSIHQPRSSIFRMFDDLMVLSEGRVMYHGPASRVA-GYFQSNGYPMPADTNPAEFAIDIVSIDYTSKEAEQESRERIARLVDDQASSVSAQTKISALTAGLPSGGASRGRXXXXXVGTRTFVGGGRKEPRSFVRSWRSRWLGDKKALTRVHAGEESAEGMGEALVVKPRIRRRAGLVEQFRLLLSRSWRQVNRAKFANMTRVVANLGSAVIFGSIFWKLGMGQTHINDRIGLLQTAVIQCAMSTVAKTLVTFPTESTVVKAERSLKMYSILPYFLSKMIAELPISALFPNIFGVILYQMTGLHPKRDRMLKFLGVLTIEAFAASAMGMLIGCLAKDGDAAMAIGPPLMTIFILFSGFYIAQDNVPRVLRWVKDASMIKHAFEALCVNELKGLDFECDTMSRGPCIRTGEQMLARVAFDKSTVKGATLGLGKILGSCWVLTYITLALANPRFQPMIDP 2106
V PV + W +++C + K+ ++ +VSG+A G+LLA+MGPSGSGKTTL+N LA Q+ S + L G + + G R G+ + A+++Q+D+F+SQLTVRETL +AA L+LP + + + V++L+ +LGL AD+IVGD K RGISGGE+KRLS+AC+L +PSLIF DEPTTGLD+FQAE+VM TLQQLA +GHTVICSIHQPR SI+ FDD+++LSEG V+Y GPA YF GY P NPAEF D++S+DYTS E+ S++RI LV+ S + +P +TR + S + KP ++RR G +QF LLL R+W Q +R N R ++ SA+IFGS+FW++G QT I DR+GLLQ A I AM+ + KT+ FP E +V ER+ Y++ PY LSK++AE+P+ A FP IFG ILY M LHP R +KF G++T E+FAASAMG+ +G + +AAMA+GP LMT+FI+F G+Y+ +N P + RW+ S+I+ AF+ L +NE GL+FE I+TGEQ L R++F S ++ + G+IL + TY+ L P++Q ++ P
Sbjct: 75 VPPVTIRWSNITCTLSDKRGKVVRFLLTEVSGEAKPGRLLAIMGPSGSGKTTLINVLAGQLTASPRLHLTGYLDVNGQPRSGGEYKIAFLRQEDLFFSQLTVRETLSLAAELQLPDGLSAEARDEYVNKLLFRLGLINCADSIVGDTKVRGISGGEKKRLSLACELIASPSLIFADEPTTGLDAFQAEKVMETLQQLALDGHTVICSIHQPRGSIYSKFDDIILLSEGSVVYMGPAKEEPLSYFAKFGYQCPDHVNPAEFLADLISVDYTSAESVFSSQKRIDDLVE----------AFSQIVPNVPC----------------------------------------TIPITRRDGSKTSVK-----FTKKPIVKRRGGWWKQFWLLLKRAWMQASRDGPTNKVRTRMSIASAMIFGSVFWRMGRTQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKEKAIVDRERAKGSYTLGPYLLSKLLAEIPVGAAFPLIFGTILYPMARLHPTLSRFVKFCGIVTAESFAASAMGLTVGAMVPTTEAAMALGPSLMTVFIVFGGYYVNAENTPLIFRWIPRVSLIRWAFQGLSINEFHGLEFE---HQHSFDIQTGEQALERLSFGGSRIRDTVMAQGRILMFWYWTTYLLLEKNKPKYQQLLPP 678 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.521.1 >prot_F-serratus_M_contig105.521.1 ID=prot_F-serratus_M_contig105.521.1|Name=mRNA_F-serratus_M_contig105.521.1|organism=Fucus serratus male|type=polypeptide|length=800bp MRGEMCQRGCGPSLLLLLLLLLGIAWPCSGSTSETDRVNPVDLEWKDVSCback to top mRNA from alignment at F-serratus_M_contig105:648392..672505- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.521.1 ID=mRNA_F-serratus_M_contig105.521.1|Name=mRNA_F-serratus_M_contig105.521.1|organism=Fucus serratus male|type=mRNA|length=24114bp|location=Sequence derived from alignment at F-serratus_M_contig105:648392..672505- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:648392..672505- >mRNA_F-serratus_M_contig105.521.1 ID=mRNA_F-serratus_M_contig105.521.1|Name=mRNA_F-serratus_M_contig105.521.1|organism=Fucus serratus male|type=CDS|length=4800bp|location=Sequence derived from alignment at F-serratus_M_contig105:648392..672505- (Fucus serratus male)back to top |