mRNA_F-serratus_M_contig105.520.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: W9X424_9EURO (Glycerophosphocholine phosphodiesterase n=3 Tax=Cladophialophora TaxID=82105 RepID=W9X424_9EURO) HSP 1 Score: 66.6 bits (161), Expect = 1.030e-6 Identity = 60/204 (29.41%), Postives = 91/204 (44.61%), Query Frame = 1 Query: 6412 FLDRDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFR-SQQYSFAACLDAQGDSPLHAAARAGK---IDAFTYLVNEAGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKE-GATPLHYAVVAGHLEIVSLLADAGA 7008 L RD GR+ H+AA G +R++ I E LR W F ++ A D +G +PLH +A G A G P+ +A L LA + +E++RLL++ G+++N D G + HV A + + ++L+ + ++ +K G TPL A V GHL IV LL D GA Sbjct: 372 LLARDSAGRTPLHFAAEYG----IRVMCEIIIEH---------------LRAWKLFDVAEGIDGAKWQDDEGWAPLHLSAIGGHPLTTKALLDAEKSMGFIPKRRSAKLSIVLALATKANFIEIVRLLIQAGVDINHQDELGDTALHVAARFGHVECARLLLAGTDEQKANIELFEKAYGWTPLFIACVDGHLPIVELLIDHGA 556
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A5N5DD98_9PEZI (Glycerophosphocholine phosphodiesterase n=2 Tax=Lasiodiplodia theobromae TaxID=45133 RepID=A0A5N5DD98_9PEZI) HSP 1 Score: 66.6 bits (161), Expect = 1.030e-6 Identity = 59/205 (28.78%), Postives = 92/205 (44.88%), Query Frame = 1 Query: 6421 RDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFR-SQQYSFAACLDAQGDSPLHAAARAGK-IDAFTYLVNEAGLRPED------SNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKEGA-TPLHYAVVAGHLEIVSLLADAGA 7008 RD GR HYAA G V +IV ++ WG+F S D G +PLH + G + T L +E P++ S + L LA + V++++LLV+ G+++N D +G + HV A +T+ K L+ + + ++ + A TPL A V GHL++V LL +AGA Sbjct: 372 RDSYGRLPLHYAAQYGFVIICKIVINY-------------------MQKWGQFDVSHGIDSPEWQDLDGYAPLHLSVIGGHPLTTKTLLDSERWQDPDEKISIRKSVSKSGAVLSLAVKSNFVQIVKLLVDAGVDINYQDEQGETALHVAARYGHTECAKALITGTPDQKANVELAESTFAWTPLFIACVDGHLDVVKLLIEAGA 557
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A7M7PEX0_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PEX0_STRPU) HSP 1 Score: 63.9 bits (154), Expect = 1.100e-6 Identity = 65/229 (28.38%), Postives = 94/229 (41.05%), Query Frame = 1 Query: 4480 GRTALMYACMYDQPQCATFLLSNHAHLDAGDKAGVTSLMLAAERGHDACVQVLLAASTTISVGHDCAERKLVDVVDVDGNYASHFACKAGAAGVLALLSEAGASMELPSGVAETGRYLYPAHLAVTHGSLLCLEQLAIRGVNLEATDGECDTVLSLAVKCGRKSCVEYLLSGGVLDGDPLVDVDRPGRQEERPLSVAVRCGKLQIFYSLLQAGADLAAKNSDGETAVHV 5166 G+ AL AC+ L++ A +D T L+LAAE GH +CV+ L IS G D +R D DG+ H A G L + + +L S G+ P H A G++ C+E L + E DGE D VD Q + PL +AV G + +L++AGADL +N+DG+T +H+ Sbjct: 22 GKGALHDACVKGDLNAIKLLINAGADVDVKSTNNSTPLLLAAEYGHQSCVEEL------ISYGADPTKR------DNDGDSLVHVASLGGGLETLKFVLDLEGMSKLISSKNNVGQI--PLHSAAKVGNIDCVELLLAQDTRQE--DGE----------------------------DSCFLVDEQDSQGKTPLHLAVEGGFSPVIEALIEAGADLNIQNNDGKTCLHL 206
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A3M7MSU1_9EURO (Glycerophosphocholine phosphodiesterase (Fragment) n=1 Tax=Chaetothyriales sp. CBS 132003 TaxID=2249419 RepID=A0A3M7MSU1_9EURO) HSP 1 Score: 66.2 bits (160), Expect = 1.360e-6 Identity = 64/228 (28.07%), Postives = 98/228 (42.98%), Query Frame = 1 Query: 6364 GREETLAAIGELDP---SLFLDRDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFRSQQ-YSFAACLDAQGDSPLHAAARAGK-IDAFTYLVNEAGLRPEDSNAHGE-------TCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKE-GATPLHYAVVAGHLEIVSLLADAGA 7008 G E + + L P S + RD GR+ HYAA G +R++ + + L+ W F ++ DA+G +PLH A G + L +E + S+ G T L LA + +E++R+LV G+++N D +G + HV A + D ++L+ S D+ + G TPL A V GH I LL DAGA Sbjct: 486 GVEFLIHVLDNLQPTQRSALMARDLAGRTPLHYAAEYG----IRVLCEVIIDH---------------LQAWKLFDVEKGIDGPNWQDAEGWAPLHLAVIGGHPLTTQALLESEKWSKNYSSHLDGAKNSPKSATALGLATKNNYIEVVRILVNAGVDINYQDEQGETALHVAARFGHVDCARLLLAGSEYQKADIELAENTYGWTPLFIACVDGHYAIADLLIDAGA 694
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: S7RI68_GLOTA (Ankyrin n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RI68_GLOTA) HSP 1 Score: 62.4 bits (150), Expect = 1.410e-6 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 6745 AAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGT-SGNSFLDLNPRDKEGATPLHYAVVAGHLEIVSLLADAGA 7008 AA+ R+++ +LL+E+G +VNA D + P H A T +KVL+ G+ LN D+ G TPLH A+ + H E LL +AGA Sbjct: 82 AASKSRLQVAKLLIERGADVNARDRANQLPLHRAATTGSTGLIKVLLNPPEGSPKPRLNTADRMGNTPLHLAMESAHAEAAVLLIEAGA 170 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.520.1 >prot_F-serratus_M_contig105.520.1 ID=prot_F-serratus_M_contig105.520.1|Name=mRNA_F-serratus_M_contig105.520.1|organism=Fucus serratus male|type=polypeptide|length=2814bp MNTRTIAPHALSILALTGTSSIMSKLAFGCKSVNRNGLHAGESLVLVYLGback to top mRNA from alignment at F-serratus_M_contig105:607751..623651+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.520.1 ID=mRNA_F-serratus_M_contig105.520.1|Name=mRNA_F-serratus_M_contig105.520.1|organism=Fucus serratus male|type=mRNA|length=15901bp|location=Sequence derived from alignment at F-serratus_M_contig105:607751..623651+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:607751..623651+ >mRNA_F-serratus_M_contig105.520.1 ID=mRNA_F-serratus_M_contig105.520.1|Name=mRNA_F-serratus_M_contig105.520.1|organism=Fucus serratus male|type=CDS|length=16884bp|location=Sequence derived from alignment at F-serratus_M_contig105:607751..623651+ (Fucus serratus male)back to top |