mRNA_F-serratus_M_contig105.520.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: UPI00201F2014 (ankyrin-3-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F2014) HSP 1 Score: 70.1 bits (170), Expect = 9.160e-8 Identity = 97/399 (24.31%), Postives = 170/399 (42.61%), Query Frame = 1 Query: 4417 ENTGETTVDFDVDKVNIQ--DIEGRTALMYACMYDQPQCATFLLSNHAHLDAGDKAGVTSLMLAAERGHDACVQVLLAAS----------TTISVGHDCAERKLVDVV----------DVDGNYASHFACKAGAAGVLA-LLSEAGASMELPSGVAETGRYLY-PAHLAVTHGSLLCLEQLAIRGVNLEATDGECDTVLSLAVKCGRKSCVEYLLSGGVLDGDPLVDVDRPGRQEERPLSVAVRCGKLQIFYSLLQAGADLAAKNSDGETAVHVAARYGQVAVVKVLAQ-----------------AGYASGENATDNEQTSLQERLSPIWQMTTNDDETATFIAASNGHAAVCRALYEVGALDPTRPNVDGITPMMVASLSGNIEVIQVLMKGGGDLN 5490 ENT + ++ V+K I DI G T LM A M +C LL+ +++ D G + + LA G+ + V+ LL + T I V +R + D++ D G H AC+ G ++ LLS+ S + ++G + + P +A G + L +G +L D D++L LA G + V++LLS ++++ G P+ VA G ++ L GA+L+ ++ G++ +H+A G +A+V+ L A + D L E + ++ + +A G+ ++ + L ++ TR +DG TP+MVA++SGN V +L G DL+ Sbjct: 661 ENTLQALLNVSVNKQVIDSIDINGHTPLMVAAMKGSEECFK-LLTPFSNIGVQDMYGNSLIHLACHGGNISIVRHLLPSFDINKAGVKGWTLIMVAAVTGQRDVFDLLKSKEADLSLFDTTGASLLHHACQGGNMAIVQHLLSD--------SDINKSGLHGWTPIMVAALFGHKRVFDILESKGADLSLFDTTGDSLLHLACHGGNMAIVQHLLSDS--------NINQLGMVGWTPIMVAAIKGHERVCDFLESKGANLSLVDTTGDSLLHLACHGGNMAIVQRLLSDSNINQLGMEGWTPIMVAAVKGHQRVLD-----LLESKGADLSLVSSSGSSLLHLACQGGNKSMVQYLLSDSNINKTR--MDGWTPIMVAAVSGNKSVFDLLESKGADLS 1035
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: R1EW72_BOTPV (Glycerophosphocholine phosphodiesterase n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1EW72_BOTPV) HSP 1 Score: 69.7 bits (169), Expect = 1.140e-7 Identity = 61/206 (29.61%), Postives = 92/206 (44.66%), Query Frame = 1 Query: 6421 RDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFR-SQQYSFAACLDAQGDSPLHAAARAGK-IDAFTYLVNEAGLRPEDSN-------AHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKEGA-TPLHYAVVAGHLEIVSLLADAGA 7008 RD GR HYAA G V +IV + ++ WG+F + D+ G +PLH + G + T L +E +D + L LA + V++++LLVE G+++N D +G + HV A +T+ K L+ S + ++N +K A TPL A V GHL + LL DAGA Sbjct: 282 RDSYGRLPLHYAAQYGFVIICKIV-------------------IEHMKKWGQFDVTHGTDSPEWQDSDGYAPLHLSVIGGHPLTTRTLLDSENWQGSQDEKISTRKLVSKSGAALALATKSNFVQIVKLLVEAGVDINYQDEQGETALHVAARYGHTECAKTLIEGSQDQKANVNLAEKTFAWTPLFIACVDGHLPVAKLLVDAGA 468
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A5D6Y8Z3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Z3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.240e-7 Identity = 49/147 (33.33%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 6628 SPLHAAARAGKIDAFTYLVNEAGLRPEDSNAHGETCLWLAAAYDRVELLR--------------------LLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKEGATPLHYAVVAGHLEIVSLLADAGA 7008 +PLH AA+ G+++ LV G D +A G T L A+ V + LL++Q LNVNAAD +G +P H N ++ +L+ G + ++ RD GATPL AV GH +I L DAGA Sbjct: 572 TPLHLAAQEGQLETIQRLVFR-GANVNDRDASGRTALHFASGAGSVAIAXXXXXXXXXXXGVGGASVLEYLLLQQHLNVNAADGDGCTPLHRAVHANSLASIALLLAADG---VQVDARDHSGATPLTIAVECGHADIAVQLIDAGA 714
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A6A5TKN7_9PLEO (Glycerophosphocholine phosphodiesterase n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5TKN7_9PLEO) HSP 1 Score: 69.3 bits (168), Expect = 1.550e-7 Identity = 62/219 (28.31%), Postives = 98/219 (44.75%), Query Frame = 1 Query: 6388 IGELDPSL---FLDRDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFRSQQ-YSFAACLDAQGDSPLHAAARAGK-------IDAFTYLVNEAGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLN-PRDKEGATPLHYAVVAGHLEIVSLLADAGA 7008 + EL SL RD GR HYAA G V IC T+++ ++ WG+F + D G SPLH A G ++A T+ + G P+ S ++G L LA E++RLLV+ G++VN + +G + H+ A ++ + +L+ S + +D++ P + TPL A V GH + LL + A Sbjct: 352 LDELPESLRASLSSRDAYGRLPLHYAAQYGFVV-------IC------------QTVISHMQTWGQFNVENGIDSVGWHDLDGCSPLHLAVSGGHKCTTKALLEAATWRDEQDGKPPKTSTSNGGAALILATQNGSKEIVRLLVDAGVDVNFRNEQGETALHIAARLDHVECAAILLQGSTSYRIDVDVPENTFAWTPLFVACVDGHEDTARLLMEHNA 551
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A8E0RU64_9TREM (Transient receptor potential cation channel subfamily A member 1 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RU64_9TREM) HSP 1 Score: 69.3 bits (168), Expect = 1.560e-7 Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 6613 DAQGDSPLHAAARAGKIDAFTYLVNEAGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLV---GTSGNSFLDLNPRDKEGATPLHYAVVAGHLEIVSL 6990 DA G +PLH AA G A L+ E G+ E S+ G L LA A++ ++ L+ G + A G P H + +++++ GT N + LN +++G TPLH+AVV GH +V L Sbjct: 180 DANGWTPLHYAAIRGNEVATYQLLKEPGIDIELSDHDGMRPLHLAVAHNETGIVHSLLTAGADPFAVTQRGNLPIHFACITGNVELVELILSHCGTDDNCRIVLNAENRDGETPLHWAVVKGHEAVVKL 308
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A3M7NQU8_9EURO (Glycerophosphocholine phosphodiesterase (Fragment) n=1 Tax=Chaetothyriales sp. CBS 134916 TaxID=2249418 RepID=A0A3M7NQU8_9EURO) HSP 1 Score: 69.3 bits (168), Expect = 1.590e-7 Identity = 62/211 (29.38%), Postives = 94/211 (44.55%), Query Frame = 1 Query: 6406 SLFLDRDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFRSQQ-YSFAACLDAQGDSPLHAAARAGK-IDAFTYLVNE-------AGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKE-GATPLHYAVVAGHLEIVSLLADAGA 7008 S + RD GR+ HYAA G +R++ + E L+ W F ++ DA+G +PLH A G + T L +E + L ++ T L LA + +E++R+LV G+++N D +G + HV A + D ++L+ S D+ + G TPL A V GH IV LL DAGA Sbjct: 367 SALMARDMAGRTPLHYAAEYG----IRVLCEVIIEH---------------LQAWKLFDVEKGIDGPNWQDAEGWAPLHLAVIGGHPLTTSTLLESEKWSKNYSSHLGVSKNSPKSATVLGLATKNNYIEVVRILVSAGVDINYQDEQGETALHVAARFGHADCARLLLAGSQYQKADIELAENTYGWTPLFIACVDGHYPIVDLLLDAGA 558
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A177D474_ALTAL (Glycerophosphocholine phosphodiesterase n=9 Tax=Alternaria TaxID=5598 RepID=A0A177D474_ALTAL) HSP 1 Score: 68.9 bits (167), Expect = 2.020e-7 Identity = 62/206 (30.10%), Postives = 93/206 (45.15%), Query Frame = 1 Query: 6421 RDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFR-SQQYSFAACLDAQGDSPLHAAARAGK-------IDAFTYL-VNEAGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKEGA-TPLHYAVVAGHLEIVSLLADAGA 7008 RD GR HYAA G V ++V M ++ WG+F +Q DA+G++PLH + G ++A + E L + A L LA + VE+++LLVE G++VN D G + H+ A Y +VL+ S + +++ +K A TPL A V HL +V +LA AGA Sbjct: 366 RDSYGRFPLHYAAQYGFVVICQVV-------------------MKHMQDWGQFDVAQGIDSDYWQDAEGNAPLHLSVMGGHPLTTKALLEAENWRGATEERLACRKAIARSGAALTLATQANFVEIVKLLVEAGVDVNYQDEGGETALHMAARYGYDKCAQVLLKGSSKNKAEVDVAEKTFAWTPLFIACVDDHLSMVEILAAAGA 552
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: A0A1Y2M178_EPING (Glycerophosphocholine phosphodiesterase n=1 Tax=Epicoccum nigrum TaxID=105696 RepID=A0A1Y2M178_EPING) HSP 1 Score: 68.6 bits (166), Expect = 2.640e-7 Identity = 62/207 (29.95%), Postives = 95/207 (45.89%), Query Frame = 1 Query: 6421 RDQTGRSIPHYAAVEGNVGCLRIVAGICAEAFTAASKGGASTLMAGLRHWGRFR-SQQYSFAACLDAQGDSPLHAAARAGKIDAFTYLVN--------EAGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHEGRSPAHVVAFNNYTD-ALKVLVGTSGNSFLDLN-PRDKEGATPLHYAVVAGHLEIVSLLADAGA 7008 RD GR HYAA G V ++V + ++ WG+F SQ D +GD+PLH + + G L+ EA + + + L LA + V +++LLVE G++VN + +G + H+ A + + A+ ++ G+ GN +DL+ P + TPL A V HL IV LLA AGA Sbjct: 366 RDAFGRLPLHYAAGYGFVVICQVV-------------------IKHMQDWGQFDVSQGIDAKYWQDDEGDAPLHLSVKGGHPLTTRALLEAENWRGSTEAKITSRKTVSQSGEALALATKANFVAIVKLLVEAGVDVNYQNKQGETALHIAAQYGHAECAMAIMEGSKGNR-VDLDVPENTFAWTPLFNACVDNHLNIVKLLATAGA 552
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: M3ELB2_9LEPT (Ankyrin repeat protein n=5 Tax=Leptospira weilii TaxID=28184 RepID=M3ELB2_9LEPT) HSP 1 Score: 63.9 bits (154), Expect = 3.300e-7 Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 6670 FTYLVNEAGLRPEDSNAHGETCLWLAAAYDRVELLRLLVEQGLNVNAADHE-GRSPAHVVAFNNYTDALKVLVGTSGNSFLDLNPRDKEGATPLHYAVVAGHLEIVSLLADAGA 7008 +++L N GL P + HG T L LA YDR+E++R+L+E + N +D + G +P +++ A+ + T +L+ RDK G +PLH+ V G LE + L + GA Sbjct: 40 YSFLQN--GLNPNLNRFHGMTPLSLAVEYDRLEVVRVLIEYFADPNLSDEKTGLTPLIHSILKDFSSAM---ISTLIKGGAELDQRDKSGMSPLHHCVSEGKLEFLRFLLEKGA 148
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Match: UPI00201F641D (putative ankyrin repeat protein RF_0381 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F641D) HSP 1 Score: 66.6 bits (161), Expect = 5.290e-7 Identity = 76/300 (25.33%), Postives = 123/300 (41.00%), Query Frame = 1 Query: 4486 TALMYACMYDQPQCATFLLSNH-AHLDAGDKAGVTSLMLAAERGHDACVQVLLAASTTISVGHDCAERKLVDVVDVDGNYASHFACKAGAAGVLALL-SEAGASMELPSGVAETGRYLYPAHLAVTHGSLLCLEQLAIRGVNLEATDGECDTVLSLAVKCGRKSCVEYLLSGGVLDGDPLVDVDRPGRQEERPLSVAVRCGKLQIFYSLLQAGADLAAKNSDGETAVHVAARYGQVAVVKVLAQAGYASGENATDNEQTSLQERLSPIWQMTTNDDETATFIAASNGHAAVCRALYEVGA 5379 T L+ AC T++LS A+L+ K G+T M+AA++GH +++L + G D ++D D N H ACK G ++ + S+ E T P A + + L G +L D + + +L L+ + G V +L V VD++ G PL +A + Q+FY L++ GA+ +A + D + +H + R G V +V + L ++ I TN ET +AA G V + L E GA Sbjct: 160 TTLIDACTVGDLPKVTYILSQDIANLNKSGKNGMTPAMIAAQKGHREILELL------VKKGADLC------LLDDDDNTILHVACKEGNVEIVKYIHSQNIIDTESRGDYGNT-----PVMFAALYRQMEVFFFLVKMGAHLSKLDDDGENILHLSSRGGDVEIVNCILKRNV------VDINSEGDDGVTPLMLAAYFRRRQVFYLLIERGANTSAVDCDNDNILHYSCRGGDVEIVNYV------------------LTHKIVNI-NSRTNALETPVLVAALRGKTKVFQLLIERGA 417 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig105.520.1 >prot_F-serratus_M_contig105.520.1 ID=prot_F-serratus_M_contig105.520.1|Name=mRNA_F-serratus_M_contig105.520.1|organism=Fucus serratus male|type=polypeptide|length=2814bp MNTRTIAPHALSILALTGTSSIMSKLAFGCKSVNRNGLHAGESLVLVYLGback to top mRNA from alignment at F-serratus_M_contig105:607751..623651+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig105.520.1 ID=mRNA_F-serratus_M_contig105.520.1|Name=mRNA_F-serratus_M_contig105.520.1|organism=Fucus serratus male|type=mRNA|length=15901bp|location=Sequence derived from alignment at F-serratus_M_contig105:607751..623651+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig105:607751..623651+ >mRNA_F-serratus_M_contig105.520.1 ID=mRNA_F-serratus_M_contig105.520.1|Name=mRNA_F-serratus_M_contig105.520.1|organism=Fucus serratus male|type=CDS|length=16884bp|location=Sequence derived from alignment at F-serratus_M_contig105:607751..623651+ (Fucus serratus male)back to top |